185 lines
17 KiB
XML
185 lines
17 KiB
XML
<document id="B6BA38CB6AF1DB87C188E98BE97B159D" ID-DOI="10.1051/parasite/2023057" ID-ISSN="1776-1042" ID-PMC="PMC10714680" ID-PubMed="38084939" ID-Zenodo-Dep="12524515" IM.bibliography_approvedBy="valdenar" IM.illustrations_approvedBy="valdenar" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="valdenar" checkinTime="1719279849764" checkinUser="felipe" docAuthor="Su, Si, Hong, Mei, Cui, Meng-Yu, Gui, Zheng, Ma, Shi-Fa, Wu, Lin, Xing, Li-Li, Mu, Lan, Yu, Jing-Feng, Fu, Shao-Yin, Gao, Rui-Juan & Qi, Dong-Dong" docDate="2023" docId="039C6B19A948D2223944FA9771F3F80A" docLanguage="en" docName="Parasite.30.58.pdf" docOrigin="Parasite (Paris, France) 30 (58)" docSource="http://dx.doi.org/10.1051/parasite/2023057" docStyle="DocumentStyle:A40D95A4C09C797DBB807E438D2BF437.2:Parasite.2013-.journal_article" docStyleId="A40D95A4C09C797DBB807E438D2BF437" docStyleName="Parasite.2013-.journal_article" docStyleVersion="2" docTitle="Rickettsia bellii" docType="treatment" docVersion="3" lastPageNumber="7" masterDocId="FFA51361A94ED2243935FFE87052FF16" masterDocTitle="Microbial diversity of ticks and a novel typhus group Rickettsia species (Rickettsiales bacterium Ac 37 b) in Inner Mongolia, China" masterLastPageNumber="13" masterPageNumber="1" pageNumber="7" updateTime="1721140996003" updateUser="valdenar" zenodo-license-document="CC-BY-4.0">
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<mods:titleInfo id="010467BDF8661E3F9D230B013E36ED6B">
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<mods:title id="4243B4AC0B145F317BE5050BDA9A099A">Microbial diversity of ticks and a novel typhus group Rickettsia species (Rickettsiales bacterium Ac 37 b) in Inner Mongolia, China</mods:title>
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<mods:namePart id="AC38764426356CD866335E0A758CF42A">Su, Si</mods:namePart>
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<mods:affiliation id="71B02D589551000D4B32C068FE21D7D0">Graduate School, Inner Mongolia Medical University, Hohhot 010059, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="BEB26EB8557BB2FC214D2DF5230846DA">Hong, Mei</mods:namePart>
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<mods:affiliation id="B4FF860A28E85568735A60B2EA116DDC">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="0189F8CA970E10FCC633EAAB1B0136CE">Cui, Meng-Yu</mods:namePart>
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<mods:affiliation id="2D3407A61169043A68CC0811A9F91C79">Graduate School, Inner Mongolia Medical University, Hohhot 010059, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="BDABC4F73EACF6E9C934AB0FA6667B66">Gui, Zheng</mods:namePart>
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<mods:affiliation id="AF44C6E141CD7C1FE896A1AA2CBB2024">First Hospital of Jilin University, Changchun 130021, China</mods:affiliation>
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<mods:namePart id="C94DF3E0B02FF10D891654F06E511196">Ma, Shi-Fa</mods:namePart>
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<mods:affiliation id="C409ADFB13196BE423BE00E39ED11654">Hulunbuir Mental Health Center, Hulunbuir 022150, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="B73911F4C7D5CF5183B5B31C6D0B4D8A">Wu, Lin</mods:namePart>
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<mods:namePart id="3C95C90854D4A088D5A0E24B643A0349">Xing, Li-Li</mods:namePart>
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<mods:affiliation id="273ECB0813DD3ED176AEC2B9BB24FECA">Department of Infection Control, Second Affiliated Hospital of Inner Mongolia Medical University, Hohhot, Inner Mongolia Autonomous Region 010000, China</mods:affiliation>
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<mods:namePart id="0FFF9AAC95A3ADAC5B3182DC144652B5">Mu, Lan</mods:namePart>
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<mods:affiliation id="ADCB099DF3BF2ECB1785501FAC75A0E4">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="5B12AF5605961C76C3CB2A89954D924B">Yu, Jing-Feng</mods:namePart>
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<mods:affiliation id="B80071C6B0651BF071FAE94C2C01783A">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="55BA07A313CD23FB0A40A68BBE1C0B8C">Fu, Shao-Yin</mods:namePart>
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<mods:affiliation id="423D951EF858F5B7A8AF138B19F57318">Inner Mongolia Academy of Agricultural & Animal Husbandry Science, Hohhot 010031, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="C8DD26588B81C9250F9DBBE07A06BAE5">Gao, Rui-Juan</mods:namePart>
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<mods:affiliation id="FAC043AC598FF7C67F778EB2E3A9E501">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="044C9AE28E39EC3087D238A04A9A0C80">Qi, Dong-Dong</mods:namePart>
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<mods:affiliation id="141B8DF91247481CD1549F55BE10F520">Hulunbuir Mental Health Center, Hulunbuir 022150, Inner Mongolia, China</mods:affiliation>
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<mods:date id="2D5B70770AB98A988DB07C6665366CC2">2023</mods:date>
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<mods:title id="C71DA4889382BEA22F2E79AB9085CBC8">Paris, France</mods:title>
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<mods:number id="A95A733D07138CD33834D572A1A390D9">30</mods:number>
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<mods:classification id="D43652EBD2BA6D44168D994C6748301A">journal article</mods:classification>
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<treatment id="039C6B19A948D2223944FA9771F3F80A" LSID="urn:lsid:plazi:treatment:039C6B19A948D2223944FA9771F3F80A" httpUri="http://treatment.plazi.org/id/039C6B19A948D2223944FA9771F3F80A" lastPageNumber="7" pageId="6" pageNumber="7">
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<subSubSection id="C32F8984A948D2223944FA977225FA8E" box="[113,631,1407,1432]" pageId="6" pageNumber="7" type="nomenclature">
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<paragraph id="8B8ADA0FA948D2223944FA977225FA8E" blockId="6.[113,631,1407,1432]" box="[113,631,1407,1432]" pageId="6" pageNumber="7">
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<heading id="D0C26D63A948D2223944FA977225FA8E" box="[113,631,1407,1432]" fontSize="9" level="2" pageId="6" pageNumber="7" reason="4">
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<emphasis id="B941061DA948D2223944FA977225FA8E" bold="true" box="[113,631,1407,1432]" pageId="6" pageNumber="7">
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Phylogenetic analysis of
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<taxonomicName id="4C35A18CA948D2223881FA977225FA8E" ID-CoL="4T2D8" box="[436,631,1407,1432]" class="Alphaproteobacteria" family="Rickettsiaceae" genus="Rickettsia" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="bellii">
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<emphasis id="B941061DA948D2223881FA977225FA8E" bold="true" box="[436,631,1407,1432]" italics="true" pageId="6" pageNumber="7">Rickettsia bellii</emphasis>
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</taxonomicName>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C32F8984A948D22239ACFA5D71F3F80A" pageId="6" pageNumber="7" type="etymology">
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<paragraph id="8B8ADA0FA948D22239ACFA5D71F3F80A" blockId="6.[113,768,1461,1820]" pageId="6" pageNumber="7">
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<taxonomicName id="4C35A18CA948D22239ACFA5D711FFADA" box="[153,333,1461,1484]" class="Alphaproteobacteria" family="Rickettsiaceae" genus="Rickettsia" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="bellii">
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<emphasis id="B941061DA948D22239ACFA5D711FFADA" box="[153,333,1461,1484]" italics="true" pageId="6" pageNumber="7">Rickettsia bellii</emphasis>
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</taxonomicName>
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(OP286852) was found only in
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<taxonomicName id="4C35A18CA948D2223944FA3C7151FAFD" box="[113,259,1492,1515]" class="Arachnida" family="Ixodidae" genus="Ixodes" kingdom="Animalia" order="Ixodida" pageId="6" pageNumber="7" phylum="Arthropoda" rank="species" species="persulcatus">
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<emphasis id="B941061DA948D2223944FA3C7151FAFD" box="[113,259,1492,1515]" italics="true" pageId="6" pageNumber="7">I. persulcatus</emphasis>
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</taxonomicName>
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, and the sequence of
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<taxonomicName id="4C35A18CA948D2223B36FA3C7208FAFD" box="[515,602,1492,1515]" class="Alphaproteobacteria" family="Rickettsiaceae" genus="Rickettsia" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="bellii">
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<emphasis id="B941061DA948D2223B36FA3C7208FAFD" box="[515,602,1492,1515]" italics="true" pageId="6" pageNumber="7">R. bellii</emphasis>
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</taxonomicName>
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was randomly selected to construct the evolutionary tree. The sequence of
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<taxonomicName id="4C35A18CA948D2223944F9F97091F93E" box="[113,195,1553,1576]" class="Alphaproteobacteria" family="Rickettsiaceae" genus="Rickettsia" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="bellii">
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<emphasis id="B941061DA948D2223944F9F97091F93E" box="[113,195,1553,1576]" italics="true" pageId="6" pageNumber="7">R. bellii</emphasis>
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</taxonomicName>
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obtained in this study is displayed on the phylogenetic tree with squares (
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<figureCitation id="130EC68AA948D222380DF9C771D6F950" box="[312,388,1583,1606]" captionStart="Figure 9" captionStartId="8.[113,180,1580,1601]" captionTargetBox="[151,1436,238,1560]" captionTargetId="figure-103@8.[151,1436,238,1560]" captionTargetPageId="8" captionText="Figure 9. Phylogenetic tree of Rickettsiales bacterium Ac37b, Rickettsia bellii, Rickettsia raoultii, Anaplasma and Coxiella in ticks based on neighbor-joining (NJ) modeling; only values higher than 60 were added to the tree branches. (a) Phylogenetic tree of Rickettsiales bacterium Ac37b identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1320 bp) and triangles (1430 bp). (b) Phylogenetic tree of Rickettsia bellii identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1109 bp). (c) Phylogenetic tree of Rickettsia raoultii identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (855 bp). (d) Phylogenetic tree of Anaplasma identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1455 bp) and triangles (547 bp). (e) Phylogenetic tree of Coxiella identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1463 bp)." figureDoi="http://doi.org/10.5281/zenodo.12524531" httpUri="https://zenodo.org/record/12524531/files/figure.png" pageId="6" pageNumber="7">Fig. 9b</figureCitation>
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). The phylogenetic tree of the 16S rRNA gene shows that
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<taxonomicName id="4C35A18CA948D2223843F9A67199F973" box="[374,459,1614,1637]" class="Alphaproteobacteria" family="Rickettsiaceae" genus="Rickettsia" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="bellii">
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<emphasis id="B941061DA948D2223843F9A67199F973" box="[374,459,1614,1637]" italics="true" pageId="6" pageNumber="7">R. bellii</emphasis>
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</taxonomicName>
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found in Inner Mongolia is on the same branch as
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<taxonomicName id="4C35A18CA948D222388CF984724EF995" box="[441,540,1644,1667]" class="Alphaproteobacteria" family="Rickettsiaceae" genus="Rickettsia" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="bellii">
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<emphasis id="B941061DA948D222388CF984724EF995" box="[441,540,1644,1667]" italics="true" pageId="6" pageNumber="7">R. bellii</emphasis>
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</taxonomicName>
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strain RML369-C (
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<collectionCode id="ED2442CAA948D222394FF96370CCF9B4" box="[122,158,1675,1698]" pageId="6" pageNumber="7">NR</collectionCode>
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074484). The sequences were compared and analyzed with
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<collectionCode id="ED2442CAA948D2223944F94170ECF9D6" box="[113,190,1705,1728]" pageId="6" pageNumber="7">MEGA</collectionCode>
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7.0 software and showed that the 16S rRNA gene sequence of
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<taxonomicName id="4C35A18CA948D22239CBF9207107F9C9" box="[254,341,1736,1759]" class="Alphaproteobacteria" family="Rickettsiaceae" genus="Rickettsia" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="bellii">
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<emphasis id="B941061DA948D22239CBF9207107F9C9" box="[254,341,1736,1759]" italics="true" pageId="6" pageNumber="7">R. bellii</emphasis>
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</taxonomicName>
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from Inner Mongolia showed 94.23% homology with the
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<taxonomicName id="4C35A18CA948D222387BF90F71F7F9E8" box="[334,421,1767,1790]" class="Alphaproteobacteria" family="Rickettsiaceae" genus="Rickettsia" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="bellii">
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<emphasis id="B941061DA948D222387BF90F71F7F9E8" box="[334,421,1767,1790]" italics="true" pageId="6" pageNumber="7">R. bellii</emphasis>
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</taxonomicName>
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strain RML369-C (
|
|
<collectionCode id="ED2442CAA948D2223BB0F90E72FBF9EB" box="[645,681,1766,1789]" pageId="6" pageNumber="7">NR</collectionCode>
|
|
074484) isolated in Marseille,
|
|
<collectingCountry id="F3229A9FA948D2223861F8ED71CFF80A" box="[340,413,1797,1820]" name="France" pageId="6" pageNumber="7">France</collectingCountry>
|
|
.
|
|
</paragraph>
|
|
</subSubSection>
|
|
</treatment>
|
|
</document> |