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<document id="F5DE4EAA5D15F490AB640F5E63C9AA01" ID-DOI="10.12651/JSR.2020.9.2.085" ID-ISSN="2713-8615" ID-Zenodo-Dep="13140525" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1722403497596" checkinUser="felipe" docAuthor="Han, Joo Hyun, Maeng, Soohyun, Park, Yuna, Lee, Sang Eun, Lee, Byoung-Hee &amp; Kim, Ki-eun Lee and Myung Kyum" docDate="2020" docId="5E1987B87709551F2BB1A3A82478FB53" docLanguage="en" docName="JSpeciesRes.9.2.85-104.pdf" docOrigin="Journal of Species Research 9 (2)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Pseudomonas reidholzensis BT" docType="treatment" docVersion="2" lastPageNumber="101" masterDocId="A220FFC07707550F2B1FA51B2773FFF7" masterDocTitle="Identification of 12 radiation-resistant bacterial species in the phylum Proteobacteria new to Korea" masterLastPageNumber="104" masterPageNumber="85" pageNumber="99" updateTime="1722403955945" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:title id="04DFC0948BE6BB9A1BB4A0CB5F01E250">Identification of 12 radiation-resistant bacterial species in the phylum Proteobacteria new to Korea</mods:title>
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<mods:namePart id="30CF3117B96FA9649477A2656F8BE5F2">Han, Joo Hyun</mods:namePart>
<mods:affiliation id="4B30D49BF52700CDA6759B67E27CB7AC">Department of Bio &amp; Environmental Technology, College of Natural Science, Seoul Womens University, Seoul 01797, Republic of Korea</mods:affiliation>
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<mods:namePart id="5D5F4801B3DCB5127362C6B9B502DB91">Maeng, Soohyun</mods:namePart>
<mods:affiliation id="AF872E6BB1B83FC3B4A910664AF17D2A">Department of Bio &amp; Environmental Technology, College of Natural Science, Seoul Womens University, Seoul 01797, Republic of Korea</mods:affiliation>
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<mods:namePart id="A0687F92804DD7DFD6027AB354B8B086">Park, Yuna</mods:namePart>
<mods:affiliation id="9867F4B1B6A01FA756DD75796F1C4E70">Department of Bio &amp; Environmental Technology, College of Natural Science, Seoul Womens University, Seoul 01797, Republic of Korea</mods:affiliation>
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<mods:namePart id="6F0AFD6136F83EA205DFB71649DF5BB7">Lee, Sang Eun</mods:namePart>
<mods:affiliation id="C436C07E8E343245A0129D487BA67D19">Department of Bio &amp; Environmental Technology, College of Natural Science, Seoul Womens University, Seoul 01797, Republic of Korea</mods:affiliation>
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<mods:namePart id="101EFC1F9ED3C8BD92819139CD885B74">Lee, Byoung-Hee</mods:namePart>
<mods:affiliation id="142D7AD03D22E7C7A5A83D1E74F1ACE3">Environmental Research Complex, National Institute of Biological Resources, Incheon 22689, Republic of Korea</mods:affiliation>
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<mods:namePart id="C601D4D99FD1F342B8CC8B63B26229BA">Kim, Ki-eun Lee and Myung Kyum</mods:namePart>
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<mods:title id="8C788804CE26A0AAFD142260AFA3B6EB">Journal of Species Research</mods:title>
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<mods:part id="238A19FC3274CD9750D16B0B88BF2881">
<mods:date id="D92FE04356FD98B5B7132CCCB0EBDECA">2020</mods:date>
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<mods:number id="7620C5783D45B1752C11192ED6D8ACAC">9</mods:number>
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<mods:identifier id="D44EB485AD920220AE1194E08B5548B1" type="ISSN">2713-8615</mods:identifier>
<mods:identifier id="92BBAB192C0DB6F6429C9DC40E185DC6" type="Zenodo-Dep">13140525</mods:identifier>
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<treatment id="5E1987B87709551F2BB1A3A82478FB53" LSID="urn:lsid:plazi:treatment:5E1987B87709551F2BB1A3A82478FB53" httpUri="http://treatment.plazi.org/id/5E1987B87709551F2BB1A3A82478FB53" lastPageId="16" lastPageNumber="101" pageId="14" pageNumber="99">
<subSubSection id="9EAA6525770955012BB1A3A822D7F839" pageId="14" pageNumber="99" type="nomenclature">
<paragraph id="D60F36AE770955012BB1A3A825A4F93B" blockId="14.[174,727,1715,1740]" box="[174,727,1715,1740]" pageId="14" pageNumber="99">
<heading id="8D4781C2770955012BB1A3A825A4F93B" box="[174,727,1715,1740]" fontSize="10" level="2" pageId="14" pageNumber="99" reason="5">
<emphasis id="E4C4EABC770955012BB1A3A825A4F93B" bold="true" box="[174,727,1715,1740]" pageId="14" pageNumber="99">
Description of
<taxonomicName id="11B04D2D770955012A4AA3A825DDF93B" authority="BT" authorityName="BT" box="[341,686,1715,1740]" class="Betaproteobacteria" family="Burkholderiaceae" genus="Pseudomonas" kingdom="Bacteria" order="Burkholderiales" pageId="14" pageNumber="99" phylum="Proteobacteria" rank="species" species="reidholzensis">
<emphasis id="E4C4EABC770955012A4AA3A825F6F93C" bold="true" box="[341,645,1715,1739]" italics="true" pageId="14" pageNumber="99">Pseudomonas reidholzensis</emphasis>
BT
</taxonomicName>
362
</emphasis>
</heading>
</paragraph>
<paragraph id="D60F36AE770955012BDAA3EF22D7F839" blockId="14.[174,779,1780,1998]" lastBlockId="14.[839,1444,1490,1998]" pageId="14" pageNumber="99">
Cells are Gram-stain-negative, flagellate, and rod-shaped. Colonies are yellow-colored after 3 days of incubation on R2A at 25°C. In the BIOLOG GEN III, positive for pH 6, pH 5, 1% NaCl, 4% NaCl,
<emphasis id="E4C4EABC77095501299CA24E25E0F89B" box="[643,659,1877,1900]" italics="true" pageId="14" pageNumber="99">α</emphasis>
-
<subScript id="4A3434EB770955012983A24025C2F89A" attach="none" box="[668,689,1877,1901]" fontSize="7" pageId="14" pageNumber="99">D-</subScript>
glucose, D- mannose, D- fructose, 1% sodium lactate, fusidic acid, glycerol, troleandomycin, rifamycin SV, L- alanine, L- arginine, L- aspartic acid, L- glutamic acid, L- histidine, L- serine, lincomycin, guanidine HCl, niaproof 4, D- galacturonic acid, D- gluconic acid, D- glucuronic acid, mucic acid, quinic acid, vancomycin, tetrazolium violet, tetrazolium blue, L- lactic acid, citric acid, L- malic acid, nalidixic acid, lithium chloride, potassium tellurite,
<emphasis id="E4C4EABC770955012FF8A3482385F99D" box="[1255,1270,1619,1642]" italics="true" pageId="14" pageNumber="99">γ</emphasis>
-amino-butryric acid,
<emphasis id="E4C4EABC77095501289FA36824FCF97C" box="[896,911,1651,1675]" italics="true" pageId="14" pageNumber="99">β</emphasis>
-hydroxy-D, L- butyric acid, propionic acid and acetic acid; weak positive for 8% NaCl, inosine, D- serine, D- fructose-6-PO
<subScript id="4A3434EB7709550128ECA3A0248FF93B" attach="left" box="[1011,1020,1723,1740]" fontSize="7" pageId="14" pageNumber="99">4</subScript>
, glyctl-L- proline, L- galactonic acid lactone, glucuronamide,
<subScript id="4A3434EB770955012F2CA3C12335F91B" attach="right" box="[1075,1094,1748,1772]" fontSize="7" pageId="14" pageNumber="99">D-</subScript>
saccharic acid, methyl pyruvate,
<emphasis id="E4C4EABC770955012858A3EE2424F8FB" box="[839,855,1781,1804]" italics="true" pageId="14" pageNumber="99">α</emphasis>
-keto-glutaric acid, bromo-succinic acid,
<emphasis id="E4C4EABC770955012E13A3EE226FF8FB" box="[1292,1308,1781,1804]" italics="true" pageId="14" pageNumber="99">α</emphasis>
-keto butyric acid, formic acid and aztreonam; but negative for dextrin, D- maltose, D- trehalose, D- trehalose, gentiobiose, sucrose,
<subScript id="4A3434EB770955012857A2402428F89B" attach="none" box="[840,859,1877,1900]" fontSize="7" pageId="14" pageNumber="99">D-</subScript>
turanose, stachyose,
<subScript id="4A3434EB770955012F23A240233CF89A" attach="right" box="[1084,1103,1877,1901]" fontSize="7" pageId="14" pageNumber="99">D-</subScript>
raffinose,
<emphasis id="E4C4EABC770955012FA4A24D23B8F89A" box="[1211,1227,1878,1901]" italics="true" pageId="14" pageNumber="99">α</emphasis>
-
<subScript id="4A3434EB770955012FCBA240239BF89A" attach="none" box="[1236,1256,1877,1901]" fontSize="7" pageId="14" pageNumber="99">D-</subScript>
lactose,
<subScript id="4A3434EB770955012E5DA2402225F89A" attach="right" box="[1346,1366,1877,1901]" fontSize="7" pageId="14" pageNumber="99">D-</subScript>
melibiose,
<emphasis id="E4C4EABC770955012865A26E24FAF87A" box="[890,905,1909,1933]" italics="true" pageId="14" pageNumber="99">β</emphasis>
-methyl-D- glucoside, D- salicin,
<emphasis id="E4C4EABC770955012FC3A26D239DF87A" box="[1244,1262,1910,1933]" italics="true" pageId="14" pageNumber="99">N</emphasis>
-acetyl-D- glucosamine,
<emphasis id="E4C4EABC77095501288BA28D24D6F85A" box="[916,933,1942,1965]" italics="true" pageId="14" pageNumber="99">N</emphasis>
-acetyl-
<emphasis id="E4C4EABC7709550128EBA28D2370F859" box="[1012,1027,1942,1966]" italics="true" pageId="14" pageNumber="99">β</emphasis>
-mannosamin,
<emphasis id="E4C4EABC770955012F82A28D23DDF85A" box="[1181,1198,1942,1965]" italics="true" pageId="14" pageNumber="99">N</emphasis>
-acetyl-D- galactosamin,
<emphasis id="E4C4EABC770955012858A2AD242AF83A" box="[839,857,1974,1997]" italics="true" pageId="14" pageNumber="99">N</emphasis>
-acetyl
<emphasis id="E4C4EABC7709550128B5A2AD24CFF83A" box="[938,956,1974,1997]" italics="true" pageId="14" pageNumber="99">N</emphasis>
-acetyl neuraminic acid, D- galactose, 3-meth-
</paragraph>
</subSubSection>
<subSubSection id="9EAA65257708551F2A7DA2482478FB53" lastPageId="16" lastPageNumber="101" pageId="15" pageNumber="100" type="description">
<paragraph id="D60F36AE770855002A7DA2482547F888" blockId="15.[289,732,1855,1919]" pageId="15" pageNumber="100">
0 100 300 600 900 1200 UV flux (J m
<superScript id="21C59BE677085500293AA26B2543F88F" attach="right" box="[549,560,1903,1912]" fontSize="4" pageId="15" pageNumber="100">-2</superScript>
)
</paragraph>
<paragraph id="D60F36AE770855002891A24D2303F875" blockId="15.[851,1290,1858,1922]" pageId="15" pageNumber="100">
0 100 200 300 400 500 UV flux (J m
<superScript id="21C59BE6770855002F7EA269231EF88D" attach="right" box="[1121,1133,1905,1914]" fontSize="4" pageId="15" pageNumber="100">-2</superScript>
)
</paragraph>
<caption id="82CF6626770855002B8FA28722F5F83A" ID-DOI="http://doi.org/10.5281/zenodo.13140566" ID-Zenodo-Dep="13140566" httpUri="https://zenodo.org/record/13140566/files/figure.png" pageId="15" pageNumber="100" startId="15.[144,176,1948,1970]" targetBox="[250,1317,259,1873]" targetPageId="15" targetType="figure">
<paragraph id="D60F36AE770855002B8FA28722F5F83A" blockId="15.[144,1414,1945,1997]" pageId="15" pageNumber="100">
<emphasis id="E4C4EABC770855002B8FA28727A6F846" bold="true" box="[144,213,1948,1970]" pageId="15" pageNumber="100">Fig. 14.</emphasis>
UV resistance graph of the strains isolated in this study. Survival rates of
<taxonomicName id="11B04D2D770855002878A286249CF846" authorityName="Brooks &amp; Murray" authorityYear="1981" baseAuthorityName="ex Raj et al." baseAuthorityYear="1960" box="[871,1007,1948,1970]" class="Actinobacteridae" family="Micrococcaceae" genus="Deinococcus" kingdom="Bacteria" order="Actinomycetales" pageId="15" pageNumber="100" phylum="Actinobacteria" rank="species" species="radiodurans">
<emphasis id="E4C4EABC770855002878A286249CF846" box="[871,1007,1948,1970]" italics="true" pageId="15" pageNumber="100">D. radiodurans</emphasis>
</taxonomicName>
R1
<superScript id="21C59BE6770855002F10A282236BF850" attach="left" box="[1039,1048,1945,1959]" fontSize="6" pageId="15" pageNumber="100">T</superScript>
(), strains () and
<taxonomicName id="11B04D2D770855002FC8A2862262F846" authorityName="Castellani &amp; Chalmers" authorityYear="1919" baseAuthorityName="Migula" baseAuthorityYear="1895" box="[1239,1297,1948,1970]" class="Gammaproteobacteria" family="Enterobacteriaceae" genus="Escherichia" kingdom="Bacteria" order="Enterobacteriales" pageId="15" pageNumber="100" phylum="Proteobacteria" rank="species" species="coli">
<emphasis id="E4C4EABC770855002FC8A2862262F846" box="[1239,1297,1948,1970]" italics="true" pageId="15" pageNumber="100">E. coli</emphasis>
</taxonomicName>
K12 () are ■ ● ◆ also shown. Strains: a, BT434; b, BT368; c, BT370; d, BT239; e, BT339; f, BT427; g, BT362; h, BT250; i, BT338; j, BT344; k, BT346; l, BT364.
</paragraph>
</caption>
<paragraph id="D60F36AE7717551F2BB1A41E257DFB93" blockId="16.[174,779,261,1188]" pageId="16" pageNumber="101">
yl-glucose, D- fucose, L- fucose, L- rhamnose, D- sorbitol, D- mannitol, D- arabitol, myo-inositol, D- glucose-6-PO
<subScript id="4A3434EB7717551F29E4A4362477FEC9" attach="left" box="[763,772,301,318]" fontSize="7" pageId="16" pageNumber="101">4</subScript>
, D- aspartic acid, D- serine, minocycline, gelatin, L- pyroglutamic acid, pectin,
<emphasis id="E4C4EABC7717551F2A9EA47D26FDFE8A" box="[385,398,358,381]" italics="true" pageId="16" pageNumber="101">p</emphasis>
-hydroxy-pheylacetic acid,
<subScript id="4A3434EB7717551F29A5A47725BDFE89" attach="right" box="[698,718,358,382]" fontSize="7" pageId="16" pageNumber="101">D-</subScript>
lactic acid methyl ester, D- malic acid, tween 40,
<emphasis id="E4C4EABC7717551F2970A49C250CFE69" box="[623,639,391,414]" italics="true" pageId="16" pageNumber="101">α</emphasis>
-hydroxy-butyric acid, acetoacetic acid, sodium butyrate and sodium bromate. In API 20NE test, positive for
<emphasis id="E4C4EABC7717551F297FA4DC251CFE28" box="[608,623,455,479]" italics="true" pageId="16" pageNumber="101">β</emphasis>
-galactosidase; weak positive for esculin hydrolysis; but negative for reduction of nitrates (NO
<subScript id="4A3434EB7717551F2A81A71426D5FDD7" attach="right" box="[414,422,527,544]" fontSize="7" pageId="16" pageNumber="101">3</subScript>
) to nitrite (NO
<subScript id="4A3434EB7717551F295EA7142539FDD7" attach="left" box="[577,586,527,544]" fontSize="7" pageId="16" pageNumber="101">2</subScript>
<superScript id="21C59BE67717551F2956A71E2520FDE5" attach="right" box="[585,595,517,530]" fontSize="7" pageId="16" pageNumber="101">-</superScript>
), reduction of nitrates (NO
<subScript id="4A3434EB7717551F2A06A7342652FDB7" attach="left" box="[281,289,559,576]" fontSize="7" pageId="16" pageNumber="101">3</subScript>
) to nitrogen (N
<subScript id="4A3434EB7717551F2ADBA73426BFFDB7" attach="left" box="[452,460,559,576]" fontSize="7" pageId="16" pageNumber="101">2</subScript>
), indole production on tryptophan, glucose fermentation, arginine dihydrolase, urease, gelatin hydrolysis. D- Mannitol and D- maltose, D- glucose (weak), L- arabinose (weak), D- mannose, potassium gluconate (weak), adipic acid (weak) and malic acid (weak) were utilized whereas,
<emphasis id="E4C4EABC7717551F2AAEA7D226B0FD17" box="[433,451,713,736]" italics="true" pageId="16" pageNumber="101">N</emphasis>
-
<subScript id="4A3434EB7717551F2AD5A7D2255FFD16" attach="left" box="[458,556,713,737]" fontSize="7" pageId="16" pageNumber="101">acetyl-D-</subScript>
glucosamine, capric acid, trisodium citrate and phenylacetic acid were not utilized. In API 32GN test, L- alanine, L- serine, D- glucose, propionic acid, capric acid, valeric acid, trisodium citrate, L- histidine, potassium 2-ketogluconate, 3-hydroxybutyric acid, 4-hydroxybenzoic acid, L- proline, D- ribose, sodium malonate, sodium acetate, lactic acid and 3-hydroxybenzoic acid were utilized whereas, L- rhamnose,
<emphasis id="E4C4EABC7717551F2BB1A6D027B3FC15" box="[174,192,971,994]" italics="true" pageId="16" pageNumber="101">N</emphasis>
-acetyl-glucosamine, inositol,
<subScript id="4A3434EB7717551F2911A6CA2550FC14" attach="right" box="[526,547,971,995]" fontSize="7" pageId="16" pageNumber="101">D-</subScript>
saccharose (sucrose), D- maltose, itaconic acid, suberic acid, potassium 5-ketogluconate, glycogen, potassium 5-ketogluconate, glycogen, D- mannitol, salicin, D- melibiose, D- fucose, D- sorbitol and
<subScript id="4A3434EB7717551F2BC5A149279FFB93" attach="right" box="[218,236,1100,1124]" fontSize="7" pageId="16" pageNumber="101">L-</subScript>
arabinose were not utilized.
</paragraph>
<paragraph id="D60F36AE7717551F2BDAA1772478FB53" blockId="16.[174,779,261,1188]" pageId="16" pageNumber="101">
Strain BT362 (
<emphasis id="E4C4EABC7717551F2A74A177260CFB73" bold="true" box="[363,383,1132,1156]" pageId="16" pageNumber="101">=</emphasis>
NIBRBAC000503041) was isolated from a soil sample, Seogwipo City in
<collectingRegion id="1474F84C7717551F295DA197251EFB53" box="[578,621,1164,1188]" country="South Korea" name="Jeju" pageId="16" pageNumber="101">Jeju</collectingRegion>
Island,
<collectingCountry id="AEA7763E7717551F29DDA1962474FB53" box="[706,775,1165,1188]" name="South Korea" pageId="16" pageNumber="101">Korea</collectingCountry>
.
</paragraph>
</subSubSection>
</treatment>
</document>