176 lines
16 KiB
XML
176 lines
16 KiB
XML
<document id="E142F84F3EFC23CA2301FD86F6D26DB0" ID-DOI="10.1051/parasite/2023057" ID-ISSN="1776-1042" ID-PMC="PMC10714680" ID-PubMed="38084939" ID-Zenodo-Dep="12524515" IM.bibliography_approvedBy="valdenar" IM.illustrations_approvedBy="valdenar" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="valdenar" checkinTime="1719279849764" checkinUser="felipe" docAuthor="Su, Si, Hong, Mei, Cui, Meng-Yu, Gui, Zheng, Ma, Shi-Fa, Wu, Lin, Xing, Li-Li, Mu, Lan, Yu, Jing-Feng, Fu, Shao-Yin, Gao, Rui-Juan & Qi, Dong-Dong" docDate="2023" docId="039C6B19A948D2223A18FA967459F9EA" docLanguage="en" docName="Parasite.30.58.pdf" docOrigin="Parasite (Paris, France) 30 (58)" docSource="http://dx.doi.org/10.1051/parasite/2023057" docStyle="DocumentStyle:A40D95A4C09C797DBB807E438D2BF437.2:Parasite.2013-.journal_article" docStyleId="A40D95A4C09C797DBB807E438D2BF437" docStyleName="Parasite.2013-.journal_article" docStyleVersion="2" docTitle="Anaplasma Theiler 1910" docType="treatment" docVersion="3" lastPageNumber="7" masterDocId="FFA51361A94ED2243935FFE87052FF16" masterDocTitle="Microbial diversity of ticks and a novel typhus group Rickettsia species (Rickettsiales bacterium Ac 37 b) in Inner Mongolia, China" masterLastPageNumber="13" masterPageNumber="1" pageNumber="7" updateTime="1721140996003" updateUser="valdenar" zenodo-license-document="CC-BY-4.0">
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<mods:titleInfo id="F0930925676EA7FBDC1E14D3FF276DBA">
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<mods:title id="AFE127499EBA666FFCA377FB07EE91EC">Microbial diversity of ticks and a novel typhus group Rickettsia species (Rickettsiales bacterium Ac 37 b) in Inner Mongolia, China</mods:title>
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<mods:name id="4B47B380A0EF74C77FEBD451CF722674" type="personal">
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<mods:namePart id="F96B56E623199B3D40F21630238EDEBC">Su, Si</mods:namePart>
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<mods:affiliation id="A8BDD6BE46E28A3C3E15111B38F2B1FA">Graduate School, Inner Mongolia Medical University, Hohhot 010059, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="BE50A88A9A81E3E9805B494A036EAFEF">Hong, Mei</mods:namePart>
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<mods:affiliation id="6B8E549AB1719F9FA187956CD92A5555">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="75C2E387840A6B3D85299493A4EF13CD">Cui, Meng-Yu</mods:namePart>
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<mods:affiliation id="B681FC79F310D6EF37753EFBCAAD842B">Graduate School, Inner Mongolia Medical University, Hohhot 010059, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="CBD3D72A482C5600EAC6C45BEFD3A2EE">Gui, Zheng</mods:namePart>
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<mods:affiliation id="F4F59989542B42F5BAF4DD2F4A74FCE4">First Hospital of Jilin University, Changchun 130021, China</mods:affiliation>
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<mods:namePart id="B6DD1F5FA892EDDE61F6B4AC37604EF1">Ma, Shi-Fa</mods:namePart>
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<mods:affiliation id="7743055EF9436B81EE3F43FF8583F92E">Hulunbuir Mental Health Center, Hulunbuir 022150, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="821A1F87CE455AAD79A3AAEDAE019D48">Wu, Lin</mods:namePart>
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<mods:affiliation id="3FF3BC08D9170A13E21330B34ABFBEC3">Beijing Guoke Biotechnology Co., Ltd, 102200 Beijing, China</mods:affiliation>
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<mods:namePart id="FE6947C8D7C1033C27C0A4B9400C999B">Xing, Li-Li</mods:namePart>
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<mods:affiliation id="47E5CFF98CE65A8F4909E5E4BE3CE1E0">Department of Infection Control, Second Affiliated Hospital of Inner Mongolia Medical University, Hohhot, Inner Mongolia Autonomous Region 010000, China</mods:affiliation>
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<mods:namePart id="8FD4C047D01D988058719E9EE7978EC4">Mu, Lan</mods:namePart>
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<mods:affiliation id="696479981F2BBD0AEA6D65B4CF0D66B1">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="3CC40740B0C0C156DBFE1AB8874D7CAE">Yu, Jing-Feng</mods:namePart>
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<mods:affiliation id="1822D7807D738122624DDE6474E27E3B">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="F9EC07F3AF361829463C7C5CBEA5709B">Fu, Shao-Yin</mods:namePart>
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<mods:affiliation id="AA8C55D99A4E96789EB792C866FD7281">Inner Mongolia Academy of Agricultural & Animal Husbandry Science, Hohhot 010031, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="2C4EB1C6A11FAF2EB475233BF5E55C83">Gao, Rui-Juan</mods:namePart>
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<mods:affiliation id="3EFF9C3B9C6A8937F4614540124374E2">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="C0E9202DB0619B08F8FC8DBC14DFC99D">Qi, Dong-Dong</mods:namePart>
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<mods:affiliation id="35C8D310B05BA4BE3730F129108068FC">Hulunbuir Mental Health Center, Hulunbuir 022150, Inner Mongolia, China</mods:affiliation>
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<mods:title id="4800F523F1FF17095DF22F78F357C952">Parasite</mods:title>
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<mods:date id="FCE92774219EED13A5DD6CA730BBEF0A">2023</mods:date>
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<mods:title id="6CFA46806F14FD0F38D805F7A0B71D08">Paris, France</mods:title>
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<mods:number id="DA4BF62D712D90C01B8CEB8EBA6DF4EE">58</mods:number>
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<mods:url id="6AE4879B9A3B50E49F0263E5FD432B9C">http://dx.doi.org/10.1051/parasite/2023057</mods:url>
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<mods:identifier id="025C3B4E17B9C16CFF7F2E87138B2A5E" type="ISSN">1776-1042</mods:identifier>
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<mods:identifier id="BD1A1614D1272A42C7E22AD2AFF0C344" type="Zenodo-Dep">12524515</mods:identifier>
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<treatment id="039C6B19A948D2223A18FA967459F9EA" LSID="urn:lsid:plazi:treatment:039C6B19A948D2223A18FA967459F9EA" httpUri="http://treatment.plazi.org/id/039C6B19A948D2223A18FA967459F9EA" lastPageNumber="7" pageId="6" pageNumber="7">
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<subSubSection id="C32F8984A948D2223A18FA9674AFFA81" box="[813,1277,1406,1431]" pageId="6" pageNumber="7" type="nomenclature">
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<paragraph id="8B8ADA0FA948D2223A18FA9674AFFA81" blockId="6.[813,1277,1406,1431]" box="[813,1277,1406,1431]" pageId="6" pageNumber="7">
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<heading id="D0C26D63A948D2223A18FA9674AFFA81" box="[813,1277,1406,1431]" fontSize="9" level="2" pageId="6" pageNumber="7" reason="4">
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<emphasis id="B941061DA948D2223A18FA9674AFFA81" bold="true" box="[813,1277,1406,1431]" pageId="6" pageNumber="7">
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Phylogenetic analysis of
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<taxonomicName id="4C35A18CA948D2223D5AFA9674AFFA81" ID-CoL="V5T" authorityName="Theiler" authorityYear="1910" box="[1135,1277,1406,1431]" class="Alphaproteobacteria" family="Anaplasmataceae" genus="Anaplasma" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="genus">
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<emphasis id="B941061DA948D2223D5AFA9674AFFA81" bold="true" box="[1135,1277,1406,1431]" italics="true" pageId="6" pageNumber="7">Anaplasma</emphasis>
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</taxonomicName>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C32F8984A948D2223A60FA5C7459F9EA" pageId="6" pageNumber="7" type="etymology">
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<paragraph id="8B8ADA0FA948D2223A60FA5C7459F9EA" blockId="6.[813,1467,1460,1788]" pageId="6" pageNumber="7">
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The
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<taxonomicName id="4C35A18CA948D2223AB9FA5C7452FADD" authorityName="Theiler" authorityYear="1910" box="[908,1024,1460,1483]" class="Alphaproteobacteria" family="Anaplasmataceae" genus="Anaplasma" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="genus">
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<emphasis id="B941061DA948D2223AB9FA5C7452FADD" box="[908,1024,1460,1483]" italics="true" pageId="6" pageNumber="7">Anaplasma</emphasis>
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</taxonomicName>
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(OP286854 and OP286856) sequences were randomly selected to build a phylogenetic tree, named after regions and displayed on the phylogenetic tree with squares and triangles (
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<figureCitation id="130EC68AA948D2223D2AF9E7743FF930" box="[1055,1133,1551,1574]" captionStart="Figure 9" captionStartId="8.[113,180,1580,1601]" captionTargetBox="[151,1436,238,1560]" captionTargetId="figure-103@8.[151,1436,238,1560]" captionTargetPageId="8" captionText="Figure 9. Phylogenetic tree of Rickettsiales bacterium Ac37b, Rickettsia bellii, Rickettsia raoultii, Anaplasma and Coxiella in ticks based on neighbor-joining (NJ) modeling; only values higher than 60 were added to the tree branches. (a) Phylogenetic tree of Rickettsiales bacterium Ac37b identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1320 bp) and triangles (1430 bp). (b) Phylogenetic tree of Rickettsia bellii identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1109 bp). (c) Phylogenetic tree of Rickettsia raoultii identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (855 bp). (d) Phylogenetic tree of Anaplasma identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1455 bp) and triangles (547 bp). (e) Phylogenetic tree of Coxiella identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1463 bp)." figureDoi="http://doi.org/10.5281/zenodo.12524531" httpUri="https://zenodo.org/record/12524531/files/figure.png" pageId="6" pageNumber="7">Fig. 9d</figureCitation>
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). The phylogenetic tree of the 16S rRNA gene shows that
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<taxonomicName id="4C35A18CA948D2223D65F9C67496F953" authorityName="Theiler" authorityYear="1910" box="[1104,1220,1582,1605]" class="Alphaproteobacteria" family="Anaplasmataceae" genus="Anaplasma" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="genus">
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<emphasis id="B941061DA948D2223D65F9C67496F953" box="[1104,1220,1582,1605]" italics="true" pageId="6" pageNumber="7">Anaplasma</emphasis>
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</taxonomicName>
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found in
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<collectingRegion id="49F114EDA948D2223C1FF9C67314F975" country="China" name="Nei Mongol" pageId="6" pageNumber="7">Inner Mongolia</collectingRegion>
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is on the same branch as
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<taxonomicName id="4C35A18CA948D2223DB4F9A5757EF972" authorityName="Lestoquard" authorityYear="1924" box="[1153,1324,1613,1636]" class="Alphaproteobacteria" family="Anaplasmataceae" genus="Anaplasma" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="ovis">
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<emphasis id="B941061DA948D2223DB4F9A5757EF972" box="[1153,1324,1613,1636]" italics="true" pageId="6" pageNumber="7">Anaplasma ovis</emphasis>
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</taxonomicName>
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strain Ao89 (
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<collectionCode id="ED2442CAA948D2223A00F9837303F994" box="[821,849,1643,1666]" pageId="6" pageNumber="7">KJ</collectionCode>
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639879). The sequences were compared and analyzed using
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<collectionCode id="ED2442CAA948D2223A18F9617328F9B6" box="[813,890,1673,1696]" pageId="6" pageNumber="7">MEGA</collectionCode>
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7.0 software. They show that the 16S rRNA gene sequence of
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<taxonomicName id="4C35A18CA948D2223A9AF9407471F9A9" authorityName="Theiler" authorityYear="1910" box="[943,1059,1704,1727]" class="Alphaproteobacteria" family="Anaplasmataceae" genus="Anaplasma" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="genus">
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<emphasis id="B941061DA948D2223A9AF9407471F9A9" box="[943,1059,1704,1727]" italics="true" pageId="6" pageNumber="7">Anaplasma</emphasis>
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</taxonomicName>
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in
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<collectingRegion id="49F114EDA948D2223D73F94074B5F9A9" box="[1094,1255,1704,1727]" country="China" name="Nei Mongol" pageId="6" pageNumber="7">Inner Mongolia</collectingRegion>
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has 99.93% homology with
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<taxonomicName id="4C35A18CA948D2223AA1F92F738FF9C8" authorityName="Lestoquard" authorityYear="1924" box="[916,989,1735,1758]" class="Alphaproteobacteria" family="Anaplasmataceae" genus="Anaplasma" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="species" species="ovis">
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<emphasis id="B941061DA948D2223AA1F92F738FF9C8" box="[916,989,1735,1758]" italics="true" pageId="6" pageNumber="7">A. ovis</emphasis>
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</taxonomicName>
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strain Ao89 (
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<collectionCode id="ED2442CAA948D2223D46F92E74DDF9CB" box="[1139,1167,1734,1757]" pageId="6" pageNumber="7">KJ</collectionCode>
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639879) found in the Qilian Mountains, Lanzhou.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |