226 lines
15 KiB
XML
226 lines
15 KiB
XML
<document ID-DOI="10.1099/ijsem.0.004644" ID-GBIF-Dataset="6b321035-fd9c-4b25-a3b6-79a05a309793" ID-ISSN="1466-5034" ID-PMC="PMC8346765" ID-PubMed="33533708" ID-Zenodo-Dep="6048739" checkinTime="1644597549702" checkinUser="felipe" docAuthor="Li, Fuyong, Cheng, Christopher C., Zheng, Jinshui, Liu, Junhong, Quevedo, Rodrigo Margain, Li, Junjie, Roos, Stefan, Gänzle, Michael G. & Walter, Jens" docDate="2021" docId="CD6F3526FFD42528443BFD2FFD1B26DB" docLanguage="en" docName="IntJSystEvolMicrobiol.71.2.004644.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology (004644) 71 (2)" docSource="http://dx.doi.org/10.1099/ijsem.0.004644" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.1:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="1" docTitle="Limosilactobacillus albertensis Li & Cheng & Zheng & Liu & Quevedo & Li & Roos & Gänzle & Walter 2021, SP. NOV." docType="treatment" docVersion="7" lastPageNumber="17" masterDocId="31564D5EFFDB25384707FFD3FFC62635" masterDocTitle="Limosilactobacillus balticus sp. nov., Limosilactobacillus agrestis sp. nov., Limosilactobacillus albertensis sp. nov., Limosilactobacillus rudii sp. nov. and Limosilactobacillus fastidiosus sp. nov., five novel Limosilactobacillus species isolated from the vertebrate gastrointestinal tract, and proposal of six subspecies of Limosilactobacillus reuteri adapted to the gastrointestinal tract of specific vertebrate hosts" masterLastPageNumber="21" masterPageNumber="1" pageNumber="16" updateTime="1668130802247" updateUser="ExternalLinkService">
|
||
<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
|
||
<mods:titleInfo>
|
||
<mods:title>Limosilactobacillus balticus sp. nov., Limosilactobacillus agrestis sp. nov., Limosilactobacillus albertensis sp. nov., Limosilactobacillus rudii sp. nov. and Limosilactobacillus fastidiosus sp. nov., five novel Limosilactobacillus species isolated from the vertebrate gastrointestinal tract, and proposal of six subspecies of Limosilactobacillus reuteri adapted to the gastrointestinal tract of specific vertebrate hosts</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:name type="personal">
|
||
<mods:role>
|
||
<mods:roleTerm>Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart>Li, Fuyong</mods:namePart>
|
||
</mods:name>
|
||
<mods:name type="personal">
|
||
<mods:role>
|
||
<mods:roleTerm>Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart>Cheng, Christopher C.</mods:namePart>
|
||
</mods:name>
|
||
<mods:name type="personal">
|
||
<mods:role>
|
||
<mods:roleTerm>Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart>Zheng, Jinshui</mods:namePart>
|
||
</mods:name>
|
||
<mods:name type="personal">
|
||
<mods:role>
|
||
<mods:roleTerm>Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart>Liu, Junhong</mods:namePart>
|
||
</mods:name>
|
||
<mods:name type="personal">
|
||
<mods:role>
|
||
<mods:roleTerm>Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart>Quevedo, Rodrigo Margain</mods:namePart>
|
||
</mods:name>
|
||
<mods:name type="personal">
|
||
<mods:role>
|
||
<mods:roleTerm>Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart>Li, Junjie</mods:namePart>
|
||
</mods:name>
|
||
<mods:name type="personal">
|
||
<mods:role>
|
||
<mods:roleTerm>Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart>Roos, Stefan</mods:namePart>
|
||
</mods:name>
|
||
<mods:name type="personal">
|
||
<mods:role>
|
||
<mods:roleTerm>Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart>Gänzle, Michael G.</mods:namePart>
|
||
</mods:name>
|
||
<mods:name type="personal">
|
||
<mods:role>
|
||
<mods:roleTerm>Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart>Walter, Jens</mods:namePart>
|
||
</mods:name>
|
||
<mods:typeOfResource>text</mods:typeOfResource>
|
||
<mods:relatedItem type="host">
|
||
<mods:titleInfo>
|
||
<mods:title>International Journal of Systematic and Evolutionary Microbiology</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:part>
|
||
<mods:date>2021</mods:date>
|
||
<mods:detail type="series">
|
||
<mods:title>004644</mods:title>
|
||
</mods:detail>
|
||
<mods:detail type="pubDate">
|
||
<mods:number>2021-02-01</mods:number>
|
||
</mods:detail>
|
||
<mods:detail type="volume">
|
||
<mods:number>71</mods:number>
|
||
</mods:detail>
|
||
<mods:detail type="issue">
|
||
<mods:number>2</mods:number>
|
||
</mods:detail>
|
||
<mods:extent unit="page">
|
||
<mods:start>1</mods:start>
|
||
<mods:end>21</mods:end>
|
||
</mods:extent>
|
||
</mods:part>
|
||
</mods:relatedItem>
|
||
<mods:location>
|
||
<mods:url>http://dx.doi.org/10.1099/ijsem.0.004644</mods:url>
|
||
</mods:location>
|
||
<mods:classification>journal article</mods:classification>
|
||
<mods:identifier type="DOI">10.1099/ijsem.0.004644</mods:identifier>
|
||
<mods:identifier type="GBIF-Dataset">6b321035-fd9c-4b25-a3b6-79a05a309793</mods:identifier>
|
||
<mods:identifier type="ISSN">1466-5034</mods:identifier>
|
||
<mods:identifier type="PMC">PMC8346765</mods:identifier>
|
||
<mods:identifier type="PubMed">33533708</mods:identifier>
|
||
<mods:identifier type="Zenodo-Dep">6048739</mods:identifier>
|
||
</mods:mods>
|
||
<treatment ID-DOI="http://doi.org/10.5281/zenodo.6310176" ID-GBIF-Taxon="193366143" ID-Zenodo-Dep="6310176" LSID="urn:lsid:plazi:treatment:CD6F3526FFD42528443BFD2FFD1B26DB" httpUri="http://treatment.plazi.org/id/CD6F3526FFD42528443BFD2FFD1B26DB" lastPageId="16" lastPageNumber="17" pageId="15" pageNumber="16">
|
||
<subSubSection pageId="15" pageNumber="16" type="nomenclature">
|
||
<paragraph blockId="15.[826,1473,764,1956]" pageId="15" pageNumber="16">
|
||
<heading allCaps="true" bold="true" fontSize="12" level="2" pageId="15" pageNumber="16" reason="3">
|
||
<emphasis bold="true" pageId="15" pageNumber="16">
|
||
DESCRIPTION OF
|
||
<taxonomicName authority="Li & Cheng & Zheng & Liu & Quevedo & Li & Roos & Gänzle & Walter, 2021" authorityName="Li & Cheng & Zheng & Liu & Quevedo & Li & Roos & Gänzle & Walter" authorityYear="2021" class="Bacilli" family="Lactobacillaceae" genus="Limosilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="15" pageNumber="16" phylum="Firmicutes" rank="species" species="albertensis" status="sp. nov.">
|
||
<emphasis bold="true" italics="true" pageId="15" pageNumber="16">LIMOSILACTOBACILLUS ALBERTENSIS</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel box="[1031,1147,802,831]" pageId="15" pageNumber="16" rank="species">SP. NOV.</taxonomicNameLabel>
|
||
</emphasis>
|
||
</heading>
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection pageId="15" pageNumber="16" type="etymology">
|
||
<paragraph blockId="15.[826,1473,764,1956]" pageId="15" pageNumber="16">
|
||
<taxonomicName authorityName="Li & Cheng & Zheng & Liu & Quevedo & Li & Roos & Gänzle & Walter" authorityYear="2021" box="[828,1145,844,868]" class="Bacilli" family="Lactobacillaceae" genus="Limosilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="15" pageNumber="16" phylum="Firmicutes" rank="species" species="albertensis">
|
||
<emphasis box="[828,1145,844,868]" italics="true" pageId="15" pageNumber="16">Limosilactobacillus albertensis</emphasis>
|
||
</taxonomicName>
|
||
(al.ber.ten′ sis. N.L. masc. adj.
|
||
<taxonomicName authorityName="Li & Cheng & Zheng & Liu & Quevedo & Li & Roos & Gänzle & Walter" authorityYear="2021" box="[829,938,874,898]" class="Bacilli" family="Lactobacillaceae" genus="Limosilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="15" pageNumber="16" phylum="Firmicutes" rank="species" species="albertensis">
|
||
<emphasis box="[829,938,874,898]" italics="true" pageId="15" pageNumber="16">albertensis</emphasis>
|
||
</taxonomicName>
|
||
, pertaining to
|
||
<collectingRegion box="[1090,1172,874,898]" country="Canada" name="Alberta" pageId="15" pageNumber="16">Alberta</collectingRegion>
|
||
, a province of
|
||
<collectingCountry box="[1319,1399,874,898]" name="Canada" pageId="15" pageNumber="16">Canada</collectingCountry>
|
||
where the isolates were characterized and identified).
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection pageId="15" pageNumber="16" type="description">
|
||
<paragraph blockId="15.[826,1473,764,1956]" pageId="15" pageNumber="16">
|
||
<collectorName box="[828,882,951,975]" pageId="15" pageNumber="16">Cells</collectorName>
|
||
are
|
||
<collectorName box="[933,1095,951,975]" pageId="15" pageNumber="16">Gram-positive</collectorName>
|
||
, non-motile, non-spore forming, catalase-negative and heterofermentative.
|
||
<collectorName box="[1309,1364,981,1005]" pageId="15" pageNumber="16">Cells</collectorName>
|
||
are rodshaped, measuring 0.8–2.4×0.6–1.2 µm.
|
||
<collectorName box="[1289,1388,1012,1036]" pageId="15" pageNumber="16">Colonies</collectorName>
|
||
of the
|
||
<typeStatus box="[828,876,1043,1067]" pageId="15" pageNumber="16">type</typeStatus>
|
||
strain
|
||
<collectorName box="[959,985,1043,1067]" pageId="15" pageNumber="16">Lr</collectorName>
|
||
3000
|
||
<superScript attach="left" box="[1039,1049,1041,1055]" fontSize="6" pageId="15" pageNumber="16">T</superScript>
|
||
on MRS agar plate incubated at the anaerobic condition at 37 °C for 2 days are whitish, opaque, raised, circular and entire, with a diameter of
|
||
<quantity box="[1331,1462,1104,1128]" metricMagnitude="-3" metricUnit="m" metricValue="1.15" metricValueMax="1.5" metricValueMin="0.8" pageId="15" pageNumber="16" unit="mm" value="1.15" valueMax="1.5" valueMin="0.8">0.8–1.5 mm</quantity>
|
||
; colonies on MRS agar plate at the aerobic condition show similar morphological characteristics as colonies on MRS agar incubated anaerobically, but with a smaller diameter of
|
||
<quantity box="[827,938,1227,1251]" metricMagnitude="-4" metricUnit="m" metricValue="7.5" metricValueMax="10.0" metricValueMin="5.0" pageId="15" pageNumber="16" unit="mm" value="0.75" valueMax="1.0" valueMin="0.5">0.5–1 mm</quantity>
|
||
. D-Lactate, L-lactate and gas are produced from glucose fermentation by the
|
||
<typeStatus box="[1129,1175,1258,1282]" pageId="15" pageNumber="16">type</typeStatus>
|
||
strain
|
||
<collectorName box="[1247,1272,1257,1281]" pageId="15" pageNumber="16">Lr</collectorName>
|
||
3000
|
||
<collectorName box="[1322,1385,1256,1281]" pageId="15" pageNumber="16">
|
||
<superScript attach="none" box="[1322,1330,1256,1270]" fontSize="6" pageId="15" pageNumber="16">T</superScript>
|
||
. Cell
|
||
</collectorName>
|
||
growth occurs at 30, 37 and 45 °C (optimum), but not at 15 °
|
||
<collectorName pageId="15" pageNumber="16">C. Growth</collectorName>
|
||
occurs at pH 4.0–8.0 in MRS broth.
|
||
<collectorName box="[1302,1342,1319,1343]" pageId="15" pageNumber="16">The</collectorName>
|
||
major fatty acids of
|
||
<collectorName box="[924,950,1349,1373]" pageId="15" pageNumber="16">Lr</collectorName>
|
||
3000
|
||
<superScript attach="left" box="[1005,1015,1348,1362]" fontSize="6" pageId="15" pageNumber="16">T</superScript>
|
||
are summed feature 7 (combination of C
|
||
<subScript attach="left" box="[846,874,1396,1410]" fontSize="6" pageId="15" pageNumber="16">19:1</subScript>
|
||
<emphasis box="[878,897,1381,1404]" italics="true" pageId="15" pageNumber="16">ω</emphasis>
|
||
6
|
||
<emphasis box="[910,920,1381,1404]" italics="true" pageId="15" pageNumber="16">c</emphasis>
|
||
and/or C
|
||
<subScript attach="left" box="[1023,1051,1396,1410]" fontSize="6" pageId="15" pageNumber="16">19:0</subScript>
|
||
cyclo
|
||
<emphasis box="[1119,1138,1381,1404]" italics="true" pageId="15" pageNumber="16">ω</emphasis>
|
||
10
|
||
<emphasis box="[1164,1174,1381,1404]" italics="true" pageId="15" pageNumber="16">c</emphasis>
|
||
) and C
|
||
<subScript attach="left" box="[1254,1282,1396,1410]" fontSize="6" pageId="15" pageNumber="16">18:1</subScript>
|
||
<emphasis box="[1286,1305,1381,1404]" italics="true" pageId="15" pageNumber="16">ω</emphasis>
|
||
9c, followed by C
|
||
<subScript attach="left" box="[845,873,1427,1441]" fontSize="6" pageId="15" pageNumber="16">16:0</subScript>
|
||
.
|
||
<collectorName box="[885,935,1411,1435]" pageId="15" pageNumber="16">Acid</collectorName>
|
||
is produced from L-arabinose,D-ribose,D-xylose, D-galactose, D-glucose, methyl α- D-glucopyranoside, aesculin, maltose, lactose, melibiose, sucrose and raffinose; the fermentation of potassium gluconate is strain-specific; acid is not produced from D-fructose,D-mannose, glycerol, erythritol, D-arabinose, L-xylose, D-adonitol, methyl
|
||
<emphasis box="[1417,1430,1564,1588]" italics="true" pageId="15" pageNumber="16">β</emphasis>
|
||
-
|
||
<collectorName pageId="15" pageNumber="16">Dxylopyranoside</collectorName>
|
||
, L-sorbose,L-rhamnose, dulcitol, inositol, D-mannitol, D-sorbitol, methyl α- D-mannopyranoside,
|
||
<emphasis box="[828,847,1657,1680]" italics="true" pageId="15" pageNumber="16">N</emphasis>
|
||
-acetylglucosamine, amygdalin, arbutin, salicin, cellobiose, trehalose, inulin, melezitose, starch, glycogen, xylitol, gentiobiose, turanose, D-lyxose, D-tagatose, D-fucose, L-fucose,D-arabitol,L-arabitol, potassium 2-ketogluconate or potassium 5-ketogluconate.
|
||
<collectorName box="[1166,1206,1779,1803]" pageId="15" pageNumber="16">The</collectorName>
|
||
cell-wall peptidoglycan of
|
||
<collectorName box="[854,879,1809,1833]" pageId="15" pageNumber="16">Lr</collectorName>
|
||
3000
|
||
<superScript attach="left" box="[932,941,1808,1822]" fontSize="6" pageId="15" pageNumber="16">T</superScript>
|
||
contains the amino acids alanine (Ala), glutamic acid (Glu), lysine (Lys) and aspartic acid (Asp), with the molar ratio 1.1 (Ala):0.8 (Asp):1.0 (Glu):1.0 (Lys), suggesting the cell-wall peptidoglycan
|
||
<typeStatus box="[1274,1322,1902,1926]" pageId="15" pageNumber="16">type</typeStatus>
|
||
A4α L-Lys– D-Asp [
|
||
<bibRefCitation author="Schumann P." box="[908,940,1932,1956]" pageId="15" pageNumber="16" pagination="101 - 129" refId="ref16862" refString="38. Schumann P. Peptidoglycan structure. In: Rainey F, Oren A (editors). Methods in Microbiology. Academic Press; 2011. pp. 101 - 129." type="book chapter" year="2011">38</bibRefCitation>
|
||
].
|
||
<collectorName box="[957,997,1932,1956]" pageId="15" pageNumber="16">The</collectorName>
|
||
DNA G+C content of
|
||
<collectorName box="[1236,1261,1932,1956]" pageId="15" pageNumber="16">Lr</collectorName>
|
||
3000
|
||
<superScript attach="left" box="[1313,1322,1931,1945]" fontSize="6" pageId="15" pageNumber="16">T</superScript>
|
||
is 38.8mol%.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection pageId="16" pageNumber="17" type="description">
|
||
<paragraph blockId="16.[121,760,181,238]" pageId="16" pageNumber="17">
|
||
<materialsCitation ID-GBIF-Occurrence="3465844306" pageId="16" pageNumber="17" typeStatus="holotype">
|
||
<collectorName box="[121,162,183,207]" pageId="16" pageNumber="17">The</collectorName>
|
||
<typeStatus box="[170,218,183,207]" pageId="16" pageNumber="17">type</typeStatus>
|
||
strain,
|
||
<collectorName box="[306,332,183,207]" pageId="16" pageNumber="17">Lr</collectorName>
|
||
3000
|
||
<superScript attach="left" box="[385,395,181,195]" fontSize="6" pageId="16" pageNumber="17">T</superScript>
|
||
(=DSM 110573
|
||
<superScript attach="right" box="[574,584,181,195]" fontSize="6" pageId="16" pageNumber="17">T</superScript>
|
||
=
|
||
<accessionNumber box="[598,733,183,207]" httpUri="http://www.ncbi.nlm.nih.gov/protein/LMG31632" pageId="16" pageNumber="17">LMG 31632</accessionNumber>
|
||
<superScript attach="right" box="[734,744,181,195]" fontSize="6" pageId="16" pageNumber="17">T</superScript>
|
||
), was isolated from the stomach of a hamster in the
|
||
<collectingCountry box="[674,729,214,238]" name="United States of America" pageId="16" pageNumber="17">USA</collectingCountry>
|
||
.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |