133 lines
15 KiB
XML
133 lines
15 KiB
XML
<document id="93531FCB4E4F97BB98543C7A76F9E317" ID-DOI="10.5852/ejt.2022.810.1723" ID-GBIF-Dataset="58fbfe9f-852b-493c-9611-822354c5a2a8" ID-ISSN="2118-9773" ID-Zenodo-Dep="6419522" ID-ZooBank="67E0CCF7-F768-4C5F-9F02-55EBFFADD3D5" IM.materialsCitations_approvedBy="juliana" IM.metadata_approvedBy="valdenar" IM.tables_approvedBy="juliana" IM.taxonomicNames_approvedBy="juliana" IM.treatmentCitations_approvedBy="juliana" IM.treatments_approvedBy="juliana" checkinTime="1649274388541" checkinUser="felipe" docAuthor="Nethupul, Hasitha, Stöhr, Sabine & Zhang, Haibin" docDate="2022" docId="487387A89B70FFF668992B9F552CC5E4" docLanguage="en" docName="ejt-810_1-95.pdf" docOrigin="European Journal of Taxonomy 810 (1)" docSource="http://zoobank.org/67e0ccf7-f768-4c5f-9f02-55ebffadd3d5" docStyle="DocumentStyle:EF2B578F1D15862ADE45B0C07C620911.14:EJT.2018-.journal_article.type1" docStyleId="EF2B578F1D15862ADE45B0C07C620911" docStyleName="EJT.2018-.journal_article.type1" docStyleVersion="14" docTitle="Ophiotomidae Paterson 1985" docType="treatment" docVersion="2" lastPageNumber="78" masterDocId="B44AFFD09B3DFFBB68242A075772C751" masterDocTitle="New species, redescriptions and new records of deep-sea brittle stars (Echinodermata: Ophiuroidea) from the South China Sea, an integrated morphological and molecular approach" masterLastPageNumber="95" masterPageNumber="1" pageNumber="78" updateTime="1733333422880" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0" zenodo-license-figures="CC-BY-4.0" zenodo-license-treatments="UNSPECIFIED">
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<mods:title id="433E1F1478F1F16AF93A15B5240F6DCB">New species, redescriptions and new records of deep-sea brittle stars (Echinodermata: Ophiuroidea) from the South China Sea, an integrated morphological and molecular approach</mods:title>
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<mods:namePart id="813D03D2A0839CC0BC2A7BCB5C44C2FF">Nethupul, Hasitha</mods:namePart>
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<mods:affiliation id="9B48A98D15FA276212F196AC4D8E1D62">Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, CAS, 57200 Sanya, China. & University of Chinese Academy of Sciences, Beijing 100039, China.</mods:affiliation>
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<mods:nameIdentifier id="73B244C3E1B212A4BB9C42C83D8D61D2" type="email">Nethupul@idsse.ac.cn</mods:nameIdentifier>
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<mods:namePart id="5A1E26B031B3888CC29787F155424E59">Stöhr, Sabine</mods:namePart>
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<mods:affiliation id="A43FE197257617406E4C1210B27C3DD4">Swedish Museum of Natural History, Department of Zoology, Box 50007, 10405 Stockholm, Sweden.</mods:affiliation>
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<mods:nameIdentifier id="E05B5C6DB4BE53FC9767F9751F0FF5E4" type="email">sabine.stohr@nrm.se</mods:nameIdentifier>
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<mods:namePart id="9090944EFB5559AB70739158FD7AA4EF">Zhang, Haibin</mods:namePart>
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<mods:affiliation id="CBDAEE49B2974F031A56476DE134E6EE">Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, CAS, 57200 Sanya, China.</mods:affiliation>
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<mods:nameIdentifier id="D5072EFCA14D2FA6733E2EA0920EA6A9" type="email">hzhang@idsse.ac.cn</mods:nameIdentifier>
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<mods:title id="61C637CFCE30E32C06B549ADEC06576D">European Journal of Taxonomy</mods:title>
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<mods:part id="8E2563372E57977DE64492980F3A5F65">
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<mods:date id="D2BA9D42CA19D34CF9FA95A960592380">2022</mods:date>
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<mods:number id="9F471066DD72089791B0CECCEC84440C">2022-04-06</mods:number>
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<mods:identifier id="327CF865CDC91F707BACB637E998FE6F" type="DOI">10.5852/ejt.2022.810.1723</mods:identifier>
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<mods:identifier id="67349C36560D0440C56EB81B74F4A01D" type="GBIF-Dataset">58fbfe9f-852b-493c-9611-822354c5a2a8</mods:identifier>
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<treatment id="487387A89B70FFF668992B9F552CC5E4" LSID="urn:lsid:plazi:treatment:487387A89B70FFF668992B9F552CC5E4" httpUri="http://treatment.plazi.org/id/487387A89B70FFF668992B9F552CC5E4" lastPageNumber="78" pageId="77" pageNumber="78" scope_class="Ophiuroidea" scope_order="Amphilephidida" scope_phylum="Echinodermata" scope_superFamily="Ophiactoidea" scope_superOrder="Ophintegrida">
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<subSubSection id="88C065359B70FFF668992B9F56BDC6E3" box="[189,463,408,434]" pageId="77" pageNumber="78" type="nomenclature">
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<paragraph id="C06536BE9B70FFF668992B9F56BDC6E3" blockId="77.[189,463,408,434]" box="[189,463,408,434]" pageId="77" pageNumber="78">
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<heading id="9B2D81D29B70FFF668992B9F56BDC6E3" bold="true" box="[189,463,408,434]" fontSize="11" level="3" pageId="77" pageNumber="78" reason="3">
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<emphasis id="F2AEEAAC9B70FFF668992B9F56BDC6E3" bold="true" box="[189,463,408,434]" pageId="77" pageNumber="78">
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Family
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<taxonomicName id="07DA4D3D9B70FFF669382B9F56BDC6E3" ID-CoL="7NK7K" authorityName="Paterson" authorityYear="1985" box="[284,463,408,434]" class="Ophiuroidea" family="Ophiotomidae" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="family">Ophiotomidae</taxonomicName>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="88C065359B70FFF668992BC0552CC5E4" pageId="77" pageNumber="78" type="description">
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<paragraph id="C06536BE9B70FFF668992BC0552CC5E4" blockId="77.[188,1399,455,693]" pageId="77" pageNumber="78">
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A 623 bp sequence of the COI gene was obtained after removing ambiguous aligned sites and used to reconstruct the ML tree from
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<specimenCount id="D6DCFD379B70FFF66A6F2BEC5586C555" box="[587,756,490,517]" pageId="77" pageNumber="78" type="generic">ten specimens</specimenCount>
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for the family
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<taxonomicName id="07DA4D3D9B70FFF66B962BED5328C555" authorityName="Paterson" authorityYear="1985" box="[946,1114,490,516]" class="Ophiuroidea" family="Ophiotomidae" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="family">Ophiotomidae</taxonomicName>
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(
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<figureCitation id="58E12A3B9B70FFF66C4A2BED53B8C554" box="[1134,1226,490,517]" captionStart="Fig" captionStartId="77.[189,232,1906,1932]" captionTargetBox="[194,1391,764,1888]" captionTargetId="figure-208@77.[174,1397,758,1893]" captionTargetPageId="77" captionText="Fig. 46. Family Ophiotomidae Paterson, 1985, Maximum likelihood (ML) tree based on partial COI sequences (bootstrap support values were generated with rapid bootstrapping algorithm for 1000 replicates). Abbreviations: IC = Inter Clade; SC = Sub-Clade; SCS = South China Sea." figureDoi="http://doi.org/10.5281/zenodo.6419631" httpUri="https://zenodo.org/record/6419631/files/figure.png" pageId="77" pageNumber="78">Fig. 46</figureCitation>
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). We failed to get COI or 16S gene sequences from
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<taxonomicName id="07DA4D3D9B70FFF66A5E280A543DC576" baseAuthorityName="Koehler" baseAuthorityYear="1904" box="[634,847,525,551]" class="Ophiuroidea" family="Ophiotomidae" genus="Ophiotreta" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="species" species="eximia">
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<emphasis id="F2AEEAAC9B70FFF66A5E280A543DC576" box="[634,847,525,551]" italics="true" pageId="77" pageNumber="78">Ophiotreta eximia</emphasis>
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</taxonomicName>
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. Therefore, only
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<taxonomicName id="07DA4D3D9B70FFF66C39280A5205C576" authority="Nethupul & Stöhr & Zhang, 2022" authorityName="Nethupul & Stöhr & Zhang" authorityYear="2022" box="[1053,1399,525,551]" class="Ophiuroidea" family="Ophiotomidae" genus="Ophiopristis" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="species" species="shenhaiyongshii" status="sp. nov.">
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<emphasis id="F2AEEAAC9B70FFF66C39280A5205C576" box="[1053,1399,525,551]" italics="true" pageId="77" pageNumber="78">Ophiopristis shenhaiyongshii</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="E99D57D79B70FFF668992836566AC51A" box="[189,280,561,587]" pageId="77" pageNumber="78" rank="species">sp. nov.</taxonomicNameLabel>
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was added to this phylogenetic tree from our collection. Two main clades were detected within
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<taxonomicName id="07DA4D3D9B70FFF668992853561BC53F" authorityName="Paterson" authorityYear="1985" box="[189,361,596,622]" class="Ophiuroidea" family="Ophiotomidae" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="family">Ophiotomidae</taxonomicName>
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. Inter-Clade 2A represents
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<taxonomicName id="07DA4D3D9B70FFF66A8A285354F8C53F" authorityName="Koehler" authorityYear="1904" box="[686,906,596,622]" class="Ophiuroidea" family="Ophiotomidae" genus="Ophiotreta" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="species" species="matura">
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<emphasis id="F2AEEAAC9B70FFF66A8A285354F8C53F" box="[686,906,596,622]" italics="true" pageId="77" pageNumber="78">Ophiotreta matura</emphasis>
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</taxonomicName>
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,
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<taxonomicName id="07DA4D3D9B70FFF66BBD2853537EC53F" baseAuthorityName="Koehler" baseAuthorityYear="1904" box="[921,1036,596,622]" class="Ophiuroidea" family="Ophiotomidae" genus="Ophiotreta" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="species" species="eximia">
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<emphasis id="F2AEEAAC9B70FFF66BBD285354DCC53F" box="[921,942,596,622]" italics="true" pageId="77" pageNumber="78">O</emphasis>
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.
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<emphasis id="F2AEEAAC9B70FFF66B9A2852537EC53F" box="[958,1036,597,622]" italics="true" pageId="77" pageNumber="78">eximia</emphasis>
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</taxonomicName>
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,
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<taxonomicName id="07DA4D3D9B70FFF66C3928535205C53F" authority="Nethupul & Stöhr & Zhang, 2022" authorityName="Nethupul & Stöhr & Zhang" authorityYear="2022" box="[1053,1399,596,622]" class="Ophiuroidea" family="Ophiotomidae" genus="Ophiopristis" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="species" species="shenhaiyongshii" status="sp. nov.">
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<emphasis id="F2AEEAAC9B70FFF66C3928535205C53F" box="[1053,1399,596,622]" italics="true" pageId="77" pageNumber="78">Ophiopristis shenhaiyongshii</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="E99D57D79B70FFF6689A28705668C5C0" box="[190,282,631,657]" pageId="77" pageNumber="78" rank="species">sp. nov.</taxonomicNameLabel>
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,
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<taxonomicName id="07DA4D3D9B70FFF66900287056E9C5C0" baseAuthorityName="Koehler" baseAuthorityYear="1904" box="[292,411,631,657]" class="Ophiuroidea" family="Ophiotomidae" genus="Ophiopristis" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="species" species="luctosa">
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<emphasis id="F2AEEAAC9B70FFF669002870564BC5C0" box="[292,313,631,657]" italics="true" pageId="77" pageNumber="78">O</emphasis>
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.
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<emphasis id="F2AEEAAC9B70FFF66962287056E9C5C0" box="[326,411,631,657]" italics="true" pageId="77" pageNumber="78">luctosa</emphasis>
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</taxonomicName>
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,
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<taxonomicName id="07DA4D3D9B70FFF6698D2870555AC5C0" baseAuthorityName="Koehler" baseAuthorityYear="1904" box="[425,552,631,657]" class="Ophiuroidea" family="Ophiotomidae" genus="Ophiopristis" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="species" species="procera">
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<emphasis id="F2AEEAAC9B70FFF6698D287056CCC5C0" box="[425,446,631,657]" italics="true" pageId="77" pageNumber="78">O</emphasis>
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.
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<emphasis id="F2AEEAAC9B70FFF669E8287F555AC5C0" box="[460,552,632,657]" italics="true" pageId="77" pageNumber="78">procera</emphasis>
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</taxonomicName>
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and
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<taxonomicName id="07DA4D3D9B70FFF66A7A28705349C5C0" authority="G. O. Sars, 1872" authorityName="G. O. Sars" authorityYear="1872" box="[606,1083,631,657]" class="Ophiuroidea" family="Ophiacanthidae" genus="Ophiacantha" kingdom="Animalia" order="Ophiacanthida" pageId="77" pageNumber="78" phylum="Echinodermata" rank="species" species="spectabilis">
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<emphasis id="F2AEEAAC9B70FFF66A7A28705409C5C0" box="[606,891,631,657]" italics="true" pageId="77" pageNumber="78">Ophiacantha spectabilis</emphasis>
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G.O. Sars, 1872
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</taxonomicName>
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(
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<figureCitation id="58E12A3B9B70FFF66C6D287053D3C5C3" box="[1097,1185,631,658]" captionStart="Fig" captionStartId="77.[189,232,1906,1932]" captionTargetBox="[194,1391,764,1888]" captionTargetId="figure-208@77.[174,1397,758,1893]" captionTargetPageId="77" captionText="Fig. 46. Family Ophiotomidae Paterson, 1985, Maximum likelihood (ML) tree based on partial COI sequences (bootstrap support values were generated with rapid bootstrapping algorithm for 1000 replicates). Abbreviations: IC = Inter Clade; SC = Sub-Clade; SCS = South China Sea." figureDoi="http://doi.org/10.5281/zenodo.6419631" httpUri="https://zenodo.org/record/6419631/files/figure.png" pageId="77" pageNumber="78">Fig. 46</figureCitation>
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). Genetic distance values are provided in Suppl. file 6.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |