202 lines
16 KiB
XML
202 lines
16 KiB
XML
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<mods:title id="6267201FB37DE8F72A3989B411E05823">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="6742EB7C094A2821408BFD5BCADFF82B">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="E4FD4853AA4B63F894628062A18E3890">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="35D3B6D549F3C063AC3879F43907CD2B">Pot, Bruno</mods:namePart>
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<mods:namePart id="25336B390155C33C5173BF24560619DA">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="6B05C5957D3800E973AC38FC4AA2235F">Wuyts, Sander</mods:namePart>
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<mods:namePart id="E797568A23D2A9AC831D0A29F1B797DD">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="CE2096E1DF0486B68EA0B0819342E30A">Gänzle, Michael G.</mods:namePart>
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<mods:namePart id="686BACC30E139D3A3E4CD59E3561ACB3">Lebeer, Sarah</mods:namePart>
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<mods:title id="AADC6FF7A1C6817E5E1E1546200B0AEA">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="E903AD7724A8CD119423E6B2CF82914D">
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<mods:date id="5107AB428F3A7FFD576145280279168D">2020</mods:date>
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<mods:number id="957FB7234D7A9AEE05A69CC8C5D2B53E">2020-04-15</mods:number>
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<mods:number id="FEC6E587C4FA9893CF139CEDCDF16359">70</mods:number>
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<treatment id="03A8D903D23B0274FC95FA64536633E2" ID-DOI="http://doi.org/10.5281/zenodo.4728779" ID-GBIF-Taxon="181761537" ID-Zenodo-Dep="4728779" LSID="urn:lsid:plazi:treatment:03A8D903D23B0274FC95FA64536633E2" httpUri="http://treatment.plazi.org/id/03A8D903D23B0274FC95FA64536633E2" lastPageId="53" lastPageNumber="2835" pageId="52" pageNumber="2834">
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<subSubSection id="C31B3B9ED23B0275FC95FA6455A036CD" pageId="52" pageNumber="2834" type="nomenclature">
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<paragraph id="8BBE6815D23B0275FC95FA6455A036CD" blockId="52.[828,1467,1424,1589]" pageId="52" pageNumber="2834">
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<heading id="D0F6DF79D23B0275FC95FA6455A036CD" allCaps="true" bold="true" fontSize="12" level="3" pageId="52" pageNumber="2834" reason="0">
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<emphasis id="B975B407D23B0275FC95FA6455A036CD" bold="true" pageId="52" pageNumber="2834">
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DESCRIPTIONOF
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<taxonomicName id="4C011396D23B0275FB9CFA6452F736CD" authority="COLLINOIDES" authorityName="PARACOLLINOIDES" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Secundilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="52" pageNumber="2834" phylum="Firmicutes" rank="species" species="collinoides" status="comb. nov.">
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<emphasis id="B975B407D23B0275FB9CFA6452F736CD" bold="true" italics="true" pageId="52" pageNumber="2834">SECUNDILACTOBACILLUS COLLINOIDES</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A246097CD23B0275FC54FA4255A036CD" box="[1021,1186,1462,1491]" pageId="52" pageNumber="2834" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C31B3B9ED23B0275FC95FA2B54AE3415" pageId="52" pageNumber="2834" type="discussion">
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<paragraph id="8BBE6815D23B0275FC95FA2B5482352B" blockId="52.[828,1467,1424,1589]" pageId="52" pageNumber="2834">
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<taxonomicName id="4C011396D23B0275FC95FA2B558A36E9" box="[828,1160,1503,1527]" class="Bacilli" family="Lactobacillaceae" genus="Secundilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="52" pageNumber="2834" phylum="Firmicutes" rank="species" species="collinoides">
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<emphasis id="B975B407D23B0275FC95FA2B558A36E9" box="[828,1160,1503,1527]" italics="true" pageId="52" pageNumber="2834">Secundilactobacillus collinoides</emphasis>
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</taxonomicName>
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(col.lin.o.i’des. L. masc. adj.
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<emphasis id="B975B407D23B0275FC97FA0A528F3508" box="[830,909,1534,1558]" italics="true" pageId="52" pageNumber="2834">collinus</emphasis>
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hilly; Gr. suff.
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<emphasis id="B975B407D23B0275FB86FA0A55603508" box="[1071,1122,1534,1558]" italics="true" pageId="52" pageNumber="2834">eides</emphasis>
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resembling, similar; N.L. masc. adj.
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<taxonomicName id="4C011396D23B0275FCC3F9E952D4352B" box="[874,982,1565,1589]" class="Bacilli" family="Lactobacillaceae" genus="Secundilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="52" pageNumber="2834" phylum="Firmicutes" rank="species" species="collinoides">
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<emphasis id="B975B407D23B0275FCC3F9E952D4352B" box="[874,982,1565,1589]" italics="true" pageId="52" pageNumber="2834">collinoides</emphasis>
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</taxonomicName>
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hill-shaped, pertaining to colony form).
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</paragraph>
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<paragraph id="8BBE6815D23B0275FC95F9BF554E35A0" blockId="52.[827,1467,1611,1726]" pageId="52" pageNumber="2834">
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Basonym:
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<taxonomicName id="4C011396D23B0275FC00F9BF5489357D" authority="Carr and Davies 1972" authorityName="Carr and Davies" authorityYear="1972" box="[937,1419,1611,1635]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="52" pageNumber="2834" phylum="Firmicutes" rank="species" species="collinoides">
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<emphasis id="B975B407D23B0275FC00F9BF55A0357D" box="[937,1186,1611,1635]" italics="true" pageId="52" pageNumber="2834">Lactobacilluscollinoides</emphasis>
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Carr and Davies 1972
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</taxonomicName>
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, 470 (Approved Lists). Prior to the species description, strains of
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<taxonomicName id="4C011396D23B0275FC95F97C52C035BE" authorityName="Carr and Davies" authorityYear="1972" box="[828,962,1672,1696]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="52" pageNumber="2834" phylum="Firmicutes" rank="species" species="collinoides">
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<emphasis id="B975B407D23B0275FC95F97C52C035BE" box="[828,962,1672,1696]" italics="true" pageId="52" pageNumber="2834">S. collinoides</emphasis>
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</taxonomicName>
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were referred to as L.
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<taxonomicName id="4C011396D23B0275FB1FF97C548235BE" box="[1206,1408,1672,1696]" class="Bacilli" family="Leuconostocaceae" genus="Leuconostoc" kingdom="Bacteria" order="Lactobacillales" pageId="52" pageNumber="2834" phylum="Firmicutes" rank="variety" species="brevis" variety="quinicus">
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<emphasis id="B975B407D23B0275FB1FF97C55F135BE" box="[1206,1267,1672,1696]" italics="true" pageId="52" pageNumber="2834">brevis</emphasis>
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var.
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<emphasis id="B975B407D23B0275FA81F97D548235BE" box="[1320,1408,1673,1696]" italics="true" pageId="52" pageNumber="2834">quinicus</emphasis>
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</taxonomicName>
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or
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<taxonomicName id="4C011396D23B0275FA0FF97D554E35A0" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="52" pageNumber="2834" phylum="Firmicutes" rank="variety" species="pasteurianus" variety="quinicus">
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||
<emphasis id="B975B407D23B0275FA0FF97D52C035A0" italics="true" pageId="52" pageNumber="2834">L. pasteurianus</emphasis>
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var.
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<emphasis id="B975B407D23B0275FC5DF953554E35A0" box="[1012,1100,1703,1726]" italics="true" pageId="52" pageNumber="2834">quinicus</emphasis>
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||
</taxonomicName>
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||
</paragraph>
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||
<paragraph id="8BBE6815D23B0275FC95F92054AE3415" blockId="52.[826,1466,1748,1803]" pageId="52" pageNumber="2834">
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Characteristicsas described [
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<bibRefCitation id="EF9015E4D23B0275FBC1F921559635F3" author="Carr JG & Davies PA" box="[1128,1172,1749,1773]" pageId="52" pageNumber="2834" pagination="463 - 471" refId="ref71897" refString="279. Carr JG, Davies PA. The ecology and classification of strains of Lactobacillus collinoides nov. spec.: a bacterium commonly Found in fermenting apple juice. J Appl Bacteriol 1972; 35: 463 - 471." type="journal article" year="1972">279</bibRefCitation>
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]; the genome size of the type strain is 3.62 Mbp. The mol% G+C content of DNA is 46.1.
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</paragraph>
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</subSubSection>
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||
<paragraph id="8BBE6815D23B0275FC95F8D554BE3446" blockId="52.[828,1468,1825,1880]" pageId="52" pageNumber="2834">Isolated from compost, as spoilage organisms in apple cider, table olives, dairy products, fermenteddurian fruit, and wines.</paragraph>
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<paragraph id="8BBE6815D23B0275FC95F899551634BD" blockId="52.[828,1467,1900,1956]" pageId="52" pageNumber="2834">
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Thetypestrainis Cl3
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||
<superScript id="7C74C55DD23B0275FBB4F89955313464" attach="left" box="[1053,1075,1900,1925]" fontSize="6" pageId="52" pageNumber="2834">aT</superScript>
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=ATCC 27612
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<superScript id="7C74C55DD23B0275FB65F89855D43464" attach="left" box="[1228,1238,1900,1914]" fontSize="6" pageId="52" pageNumber="2834">T</superScript>
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= DSM 20515
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<superScript id="7C74C55DD23B0275FAC6F898547B3464" attach="none" box="[1391,1401,1900,1914]" fontSize="6" pageId="52" pageNumber="2834">T</superScript>
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=JCM 1123
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<superScript id="7C74C55DD23B0275FCC6F87F527B3487" attach="left" box="[879,889,1931,1945]" fontSize="6" pageId="52" pageNumber="2834">T</superScript>
|
||
= LMG 9194
|
||
<superScript id="7C74C55DD23B0275FBAFF87F550C3487" attach="none" box="[1030,1038,1931,1945]" fontSize="6" pageId="52" pageNumber="2834">T</superScript>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BBE6815D23A0274FFD0FF4353BC33D1" blockId="53.[121,702,183,207]" box="[121,702,183,207]" pageId="53" pageNumber="2835">Genome sequence accession number: AYYR00000000.</paragraph>
|
||
<paragraph id="8BBE6815D23A0274FFD0FF11536633E2" blockId="53.[121,612,228,253]" box="[121,612,228,253]" pageId="53" pageNumber="2835">
|
||
16S rRNA gene accession number:
|
||
<accessionNumber id="9452F5F6D23A0274FE47FF10536233E2" box="[494,608,228,252]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AB005893" pageId="53" pageNumber="2835">AB005893</accessionNumber>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |