376 lines
35 KiB
XML
376 lines
35 KiB
XML
<document id="30C1BBEB8DAEF1AADA04B1EFF2D5B87D" ID-CLB-Dataset="276807" ID-DOI="10.1099/ijsem.0.004971" ID-GBIF-Dataset="6bcdc052-5eb7-4b99-bd60-c7396987ff1d" ID-ISSN="1466-5034" ID-PMC="PMC8513616" ID-PubMed="34424837" ID-Zenodo-Dep="6224216" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1645466368498" checkinUser="felipe" docAuthor="Zhao, Mei, Koirala, Santosh, Chen, Hsiao-Chun, Gitaitis, Ronald, Kvitko, Brian & Dutta, Bhabesh" docDate="2021" docId="994DEA2AFF821A7FFC90EB5DB677FCF1" docLanguage="en" docName="IntJSystEvolMicrobiol.71.8.004971.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology (004971) 71 (8)" docSource="http://dx.doi.org/10.1099/ijsem.0.004971" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Pseudomonas capsici Zhao & Koirala & Chen & Gitaitis & Kvitko & Dutta 2021, SP. NOV." docType="treatment" docVersion="9" lastPageNumber="6" masterDocId="65749252FF861A7AFFACEE55B206FFE6" masterDocTitle="Pseudomonas capsici sp. nov., a plant-pathogenic bacterium isolated from pepper leaf in Georgia, USA" masterLastPageNumber="7" masterPageNumber="1" pageNumber="5" updateTime="1702002109832" updateUser="plazi">
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<mods:title id="24209BD7F0411D40FE1978A88322541E">Pseudomonas capsici sp. nov., a plant-pathogenic bacterium isolated from pepper leaf in Georgia, USA</mods:title>
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<mods:namePart id="80E7B082DE6AECF9B01C4457D56F2E54">Zhao, Mei</mods:namePart>
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<mods:namePart id="643564C223BE56B7E6AA03A418F9C4FA">Koirala, Santosh</mods:namePart>
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<mods:namePart id="5B3690251FF6171AB5C6EE5DE51F675C">Chen, Hsiao-Chun</mods:namePart>
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<mods:namePart id="F0E784410556B0C389992A6CDB9BBB40">Gitaitis, Ronald</mods:namePart>
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<mods:namePart id="C9D3F6E37BF96EDE03C7E72EF6732584">Kvitko, Brian</mods:namePart>
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<mods:namePart id="24CAED40B21BD09D8DCE89BE12E22BC1">Dutta, Bhabesh</mods:namePart>
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<mods:title id="409D282C5962DDC0205C6A4E393F4EEF">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="48F67652F132BC583E490EC4BCE92B1C">
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<mods:date id="313CF3AF018263C4A9489C7AAD31A813">2021</mods:date>
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<mods:title id="26D791461128E413BFACA27521E9DF05">004971</mods:title>
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<mods:number id="C241163731D5F04AAA1579EDF4E2A84F">2021-08-23</mods:number>
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<treatment id="994DEA2AFF821A7FFC90EB5DB677FCF1" ID-GBIF-Taxon="217244784" LSID="urn:lsid:plazi:treatment:994DEA2AFF821A7FFC90EB5DB677FCF1" httpUri="http://treatment.plazi.org/id/994DEA2AFF821A7FFC90EB5DB677FCF1" lastPageId="5" lastPageNumber="6" pageId="4" pageNumber="5">
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<subSubSection id="59FE08B7FF821A7EFC90EB5DB17BFAAD" pageId="4" pageNumber="5" type="nomenclature">
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<paragraph id="115B5B3CFF821A7EFC90EB5DB17BFAAD" blockId="4.[826,1469,1288,1955]" pageId="4" pageNumber="5">
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<heading id="4A13EC50FF821A7EFC90EB5DB17BFAAD" allCaps="true" bold="true" centered="true" fontSize="12" level="2" pageId="4" pageNumber="5" reason="3">
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<emphasis id="2390872EFF821A7EFC90EB5DB17BFAAD" bold="true" pageId="4" pageNumber="5">
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DESCRIPTION OF
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<taxonomicName id="D6E420BFFF821A7EFB99EB5DB783FAC3" authority="Zhao & Koirala & Chen & Gitaitis & Kvitko & Dutta, 2021" authorityName="Zhao & Koirala & Chen & Gitaitis & Kvitko & Dutta" authorityYear="2021" box="[1077,1413,1288,1317]" class="Alphaproteobacteria" family="Caulobacteraceae" genus="Pseudomonas" kingdom="Bacteria" order="Caulobacterales" pageId="4" pageNumber="6" phylum="Proteobacteria" rank="species" species="capsici" status="sp. nov.">
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<emphasis id="2390872EFF821A7EFB99EB5DB783FAC3" bold="true" box="[1077,1413,1288,1317]" italics="true" pageId="4" pageNumber="5">PSEUDOMONAS CAPSICI</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="38A33A55FF821A7EFA22EB5DB17BFAAD" pageId="4" pageNumber="5" rank="species">SP. NOV.</taxonomicNameLabel>
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<paragraph id="115B5B3CFF821A7EFC90EB0CB726FA77" blockId="4.[826,1469,1288,1955]" pageId="4" pageNumber="5">
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<taxonomicName id="D6E420BFFF821A7EFC90EB0CB612FA97" authorityName="Zhao & Koirala & Chen & Gitaitis & Kvitko & Dutta" authorityYear="2021" box="[828,1044,1369,1393]" class="Alphaproteobacteria" family="Caulobacteraceae" genus="Pseudomonas" kingdom="Bacteria" order="Caulobacterales" pageId="4" pageNumber="5" phylum="Proteobacteria" rank="species" species="capsici">
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<emphasis id="2390872EFF821A7EFC90EB0CB612FA97" box="[828,1044,1369,1393]" italics="true" pageId="4" pageNumber="5">Pseudomonas capsici</emphasis>
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</taxonomicName>
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||
(cap′ si.ci. N.L. neut. gen n.
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<taxonomicName id="D6E420BFFF821A7EFA9DEB0FB770FA97" authorityName="Zhao & Koirala & Chen & Gitaitis & Kvitko & Dutta" authorityYear="2021" box="[1329,1398,1370,1393]" class="Alphaproteobacteria" family="Caulobacteraceae" genus="Pseudomonas" kingdom="Bacteria" order="Caulobacterales" pageId="4" pageNumber="5" phylum="Proteobacteria" rank="species" species="capsici">
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<emphasis id="2390872EFF821A7EFA9DEB0FB770FA97" box="[1329,1398,1370,1393]" italics="true" pageId="4" pageNumber="5">capsici</emphasis>
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</taxonomicName>
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, referring to
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<taxonomicName id="D6E420BFFF821A7EFC25EB2FB1F7FA77" box="[905,1009,1402,1425]" class="Magnoliopsida" family="Solanaceae" genus="Capsicum" kingdom="Plantae" order="Solanales" pageId="4" pageNumber="5" phylum="Tracheophyta" rank="genus">
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<emphasis id="2390872EFF821A7EFC25EB2FB1F7FA77" box="[905,1009,1402,1425]" italics="true" pageId="4" pageNumber="5">Capsicum</emphasis>
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</taxonomicName>
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, the genus name of pepper).
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</paragraph>
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||
<subSubSection id="59FE08B7FF821A7FFC90EBFCB189FD5C" lastPageId="5" lastPageNumber="6" pageId="4" pageNumber="5" type="description">
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<paragraph id="115B5B3CFF821A7FFC90EBFCB189FD5C" blockId="4.[826,1469,1288,1955]" lastBlockId="5.[827,1473,183,791]" lastPageId="5" lastPageNumber="6" pageId="4" pageNumber="5">
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The colonies are light cream, opaque, round and 1.0–2.0 mm diameter after incubation at 28 °C for 24 h on nutrient agar medium. The cells are Gram-negative, aerobic, motile with multiple polar flagella and rod-shaped (2.4 µm long and 0.7 µm wide). Strains are levan-negative, oxidase-positive, positive for potato rot activity and arginine-dihydrolasenegative, and induce hypersensitive reactions on tobacco. The cells are fluorescent on King’s B medium under ultraviolet light. Cell growth occurs at 4–37 °C, with optimum growth observed between 28 and 30°C. The bacterium grows at pH 5–6 and with 1–4% NaCl. The fatty acids comprise summed feature 3 (
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<specimenCode id="4142F347FF821A7EFB23E95EB6B0F8CF" box="[1167,1206,1803,1833]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">
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C
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<subScript id="8D605979FF821A7EFB0FE94EB6B0F8CF" attach="left" box="[1187,1206,1819,1833]" fontSize="6" pageId="4" pageNumber="5">16</subScript>
|
||
</specimenCode>
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||
:1 ω7
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||
<emphasis id="2390872EFF821A7EFB4FE95EB6EBF8C4" box="[1251,1261,1803,1826]" italics="true" pageId="4" pageNumber="5">c</emphasis>
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and/or
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||
<specimenCode id="4142F347FF821A7EFAE1E95EB775F8CF" box="[1357,1395,1803,1833]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">
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C
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<subScript id="8D605979FF821A7EFACCE94EB775F8CF" attach="left" box="[1376,1395,1819,1833]" fontSize="6" pageId="4" pageNumber="5">16</subScript>
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</specimenCode>
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||
:1 ω6
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<emphasis id="2390872EFF821A7EFA0CE95EB7ACF8C4" box="[1440,1450,1803,1826]" italics="true" pageId="4" pageNumber="5">c</emphasis>
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), C, summed feature 8 (
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<specimenCode id="4142F347FF821A7EFBFAE97EB67AF8AF" box="[1110,1148,1835,1865]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">
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C
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<subScript id="8D605979FF821A7EFBC6E96EB67AF8AF" attach="left" box="[1130,1148,1851,1865]" fontSize="6" pageId="4" pageNumber="5">18</subScript>
|
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</specimenCode>
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:1 ω7
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<emphasis id="2390872EFF821A7EFB05E979B6B5F8A5" box="[1193,1203,1836,1859]" italics="true" pageId="4" pageNumber="5">c</emphasis>
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and/or
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<specimenCode id="4142F347FF821A7EFABCE97EB732F8AF" box="[1296,1332,1835,1865]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">
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C
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<subScript id="8D605979FF821A7EFA8EE96EB732F8AF" attach="left" box="[1314,1332,1851,1865]" fontSize="6" pageId="4" pageNumber="5">18</subScript>
|
||
</specimenCode>
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||
:1 ω6
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<emphasis id="2390872EFF821A7EFACDE979B76DF8A5" box="[1377,1387,1836,1859]" italics="true" pageId="4" pageNumber="5">c</emphasis>
|
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),
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||
<specimenCode id="4142F347FF821A7EFA29E97EB7A0F8AF" box="[1413,1446,1835,1865]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">
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C
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||
<subScript id="8D605979FF821A7EFA3BE96EB7A0F8AF" attach="left" box="[1431,1446,1851,1865]" fontSize="6" pageId="4" pageNumber="5">12</subScript>
|
||
</specimenCode>
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||
:0,
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<specimenCode id="4142F347FF821A7EFC90E91EB185F885" box="[828,899,1867,1891]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">C 3</specimenCode>
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||
-OH,
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<specimenCode id="4142F347FF821A7EFC6BE91EB1ECF88F" box="[967,1002,1867,1897]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">
|
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C
|
||
<subScript id="8D605979FF821A7EFC76E90EB1ECF88F" attach="left" box="[986,1002,1883,1897]" fontSize="6" pageId="4" pageNumber="5">10</subScript>
|
||
</specimenCode>
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||
:0 3-OH,
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||
<specimenCode id="4142F347FF821A7EFBFDE91EB675F88F" box="[1105,1139,1867,1897]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">
|
||
C
|
||
<subScript id="8D605979FF821A7EFBCFE90EB675F88F" attach="left" box="[1123,1139,1883,1897]" fontSize="6" pageId="4" pageNumber="5">12</subScript>
|
||
</specimenCode>
|
||
:0 2-OH, 11-methyl
|
||
<specimenCode id="4142F347FF821A7EFAF4E91EB77AF88F" box="[1368,1404,1867,1897]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">
|
||
C
|
||
<subScript id="8D605979FF821A7EFAC6E90EB77AF88F" attach="left" box="[1386,1404,1883,1897]" fontSize="6" pageId="4" pageNumber="5">18</subScript>
|
||
</specimenCode>
|
||
:1 ω7
|
||
<emphasis id="2390872EFF821A7EFA1CE919B7BCF885" box="[1456,1466,1868,1891]" italics="true" pageId="4" pageNumber="5">c</emphasis>
|
||
and
|
||
<specimenCode id="4142F347FF821A7EFCC7E93EB18AF86F" box="[875,908,1899,1929]" collectionCode="C" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="5" type="Herbarium">
|
||
C
|
||
<subScript id="8D605979FF821A7EFCD1E92EB18AF86F" attach="left" box="[893,908,1915,1929]" fontSize="6" pageId="4" pageNumber="5">18</subScript>
|
||
</specimenCode>
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||
:0. The bacterium has diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylglycerol as major polar lipids. Biolog GEN III MicroPlate assays show that Pc19-1
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<superScript id="E691F674FF831A7FFF69EA4EB2C9FBCF" attach="left" box="[197,207,1051,1065]" fontSize="6" pageId="5" pageNumber="6">T</superScript>
|
||
can utilize α-D-glucose,D-mannose,D-mannitol, methyl pyruvate, γ-amino-butyric acid, D-fructose, D-arabitol,L-alanine,D-galactose, myo-inositol,D-gluconic acid, L-lactic acid, glycerol, L-aspartic acid, citric acid, D-fucose,L-glutamic acid, glucuronamide, α-keto-glutaric acid, L-fucose, D-fructose-6-
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||
<specimenCode id="4142F347FF831A7FFB27EE83B6B1FF12" box="[1163,1207,214,244]" collectionCode="PO" country="Russia" name="Collection of the Zoological Institute of the Russian Academy of Sciences" pageId="5" pageNumber="6">
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PO
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||
<subScript id="8D605979FF831A7FFB03EEB3B6B1FF12" attach="left" box="[1199,1207,230,244]" fontSize="6" pageId="5" pageNumber="6">4</subScript>
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||
</specimenCode>
|
||
, mucic acid, D-malic acid, propionic acid, D-aspartic acid,L-pyroglutamic acid, quinic acid, L-malic acid, acetic acid, inosine, L-serine and D-saccharic acid. Strain Pc19-1
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<superScript id="E691F674FF831A7FFB6EEF65B6CAFED8" attach="left" box="[1218,1228,304,318]" fontSize="6" pageId="5" pageNumber="6">T</superScript>
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is able to grow in the presence of 1% sodium lactate, troleandomycin, lincomycin, vancomycin, nalidixic acid, aztreonam, fusidic acid, rifamycin SV, guanidine HC, tetrazolium violet, lithium chloride, D-serine, niaproof 4, tetrazolium blue, potassium tellurite and sodium bromate. Using API 20 NE assays, the bacterium assimilates glucose, arabinose, mannose, mannitol, gluconate, caprate, malate and citrate, and is positive for nitrate reduction to nitrite, urease and β-glucosidase, but negative for indole production, arginine dihydrolase, gelatin hydrolysis, β-galactosidase, assimilation of
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||
<emphasis id="2390872EFF831A7FFC24ECD0B19DFD7A" box="[904,923,645,668]" italics="true" pageId="5" pageNumber="6">N</emphasis>
|
||
-acetyl-glucosamine, maltose, adipate and phenylacetate.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<paragraph id="115B5B3CFF821A7EFCE2E96EB16CF8AF" blockId="4.[826,1469,1288,1955]" box="[846,874,1851,1865]" pageId="4" pageNumber="5">
|
||
<subScript id="8D605979FF821A7EFCE2E96EB16CF8AF" attach="left" box="[846,874,1851,1865]" fontSize="6" pageId="4" pageNumber="5">16:0</subScript>
|
||
</paragraph>
|
||
<paragraph id="115B5B3CFF821A7EFCE2E90EB16AF88F" blockId="4.[826,1469,1288,1955]" box="[846,876,1883,1898]" pageId="4" pageNumber="5">
|
||
<subScript id="8D605979FF821A7EFCE2E90EB16AF88F" attach="left" box="[846,876,1883,1898]" fontSize="6" pageId="4" pageNumber="5">12:0</subScript>
|
||
</paragraph>
|
||
<caption id="459B0BB4FF831A7FFFD5EEE2B011FE49" ID-Table-UUID="459B0BB4FF831A7FFFD5EEE2B011FE49" httpUri="http://table.plazi.org/id/459B0BB4FF831A7FFFD5EEE2B011FE49" pageId="5" pageNumber="6" startId="5.[121,171,183,202]" targetBox="[138,733,461,949]" targetIsTable="true" targetPageId="5">
|
||
<paragraph id="115B5B3CFF831A7FFFD5EEE2B338FF19" blockId="5.[121,761,183,431]" pageId="5" pageNumber="6">
|
||
<emphasis id="2390872EFF831A7FFFD5EEE2B2C5FF2C" bold="true" box="[121,195,183,202]" pageId="5" pageNumber="6">Table 3.</emphasis>
|
||
Selected phenotypic characteristics and substrate-utilization profiles of strain Pc19-1
|
||
<superScript id="E691F674FF831A7FFEFBEE84B358FF3A" attach="left" box="[343,350,209,220]" fontSize="5" pageId="5" pageNumber="6">T</superScript>
|
||
and representative strains of closely related
|
||
<taxonomicName id="D6E420BFFF831A7FFFD5EEB9B338FF19" box="[121,318,236,255]" pageId="5" pageNumber="6">
|
||
<emphasis id="2390872EFF831A7FFFD5EEB9B2F2FF19" box="[121,244,236,255]" italics="true" pageId="5" pageNumber="6">Pseudomonas</emphasis>
|
||
species
|
||
</taxonomicName>
|
||
</paragraph>
|
||
<paragraph id="115B5B3CFF831A7FFFD5EF43B011FE49" blockId="5.[121,761,183,431]" pageId="5" pageNumber="6">
|
||
Strains: 1, Pc19-1
|
||
<superScript id="E691F674FF831A7FFEB7EF40B324FEC6" attach="none" box="[283,290,277,288]" fontSize="5" pageId="5" pageNumber="6">T</superScript>
|
||
; 2,
|
||
<taxonomicName id="D6E420BFFF831A7FFEEFEF43B3CCFECF" authority="ATCC" authorityName="ATCC" box="[323,458,278,297]" class="Alphaproteobacteria" family="Caulobacteraceae" genus="Pseudomonas" kingdom="Bacteria" order="Caulobacterales" pageId="5" pageNumber="6" phylum="Proteobacteria" rank="species" species="cichorii">
|
||
<emphasis id="2390872EFF831A7FFEEFEF43B393FECF" box="[323,405,278,297]" italics="true" pageId="5" pageNumber="6">P. cichorii</emphasis>
|
||
ATCC
|
||
</taxonomicName>
|
||
10857
|
||
<superScript id="E691F674FF831A7FFDA5EF40B016FEC6" attach="none" box="[521,528,277,288]" fontSize="5" pageId="5" pageNumber="6">T</superScript>
|
||
; 3,
|
||
<taxonomicName id="D6E420BFFF831A7FFD9CEF43B0CAFECF" authority="GEV" authorityName="GEV" box="[560,716,278,297]" class="Alphaproteobacteria" family="Caulobacteraceae" genus="Pseudomonas" kingdom="Bacteria" order="Caulobacterales" pageId="5" pageNumber="6" phylum="Proteobacteria" rank="species" species="floridensis">
|
||
<emphasis id="2390872EFF831A7FFD9CEF43B099FECF" box="[560,671,278,297]" italics="true" pageId="5" pageNumber="6">P. floridensis</emphasis>
|
||
GEV
|
||
</taxonomicName>
|
||
388
|
||
<superScript id="E691F674FF831A7FFD40EF40B0F5FEC6" attach="none" box="[748,755,277,288]" fontSize="5" pageId="5" pageNumber="6">T</superScript>
|
||
; 4,
|
||
<taxonomicName id="D6E420BFFF831A7FFF3CEF64B364FEA2" authority="ICMP 2848" authorityName="ICMP" authorityYear="2848" box="[144,354,305,324]" class="Alphaproteobacteria" family="Caulobacteraceae" genus="Pseudomonas" kingdom="Bacteria" order="Caulobacterales" pageId="5" pageNumber="6" phylum="Proteobacteria" rank="species" species="viridiflava">
|
||
<emphasis id="2390872EFF831A7FFF3CEF64B2FFFEA2" box="[144,249,305,324]" italics="true" pageId="5" pageNumber="6">P. viridiflava</emphasis>
|
||
ICMP 2848
|
||
</taxonomicName>
|
||
<superScript id="E691F674FF831A7FFECEEF65B36FFEDD" attach="none" box="[354,361,304,315]" fontSize="5" pageId="5" pageNumber="6">T</superScript>
|
||
; 5,
|
||
<taxonomicName id="D6E420BFFF831A7FFE20EF64B029FEA2" authority="LMG" authorityName="LMG" box="[396,559,305,324]" class="Alphaproteobacteria" family="Caulobacteraceae" genus="Pseudomonas" kingdom="Bacteria" order="Caulobacterales" pageId="5" pageNumber="6" phylum="Proteobacteria" rank="species" species="asturiensis">
|
||
<emphasis id="2390872EFF831A7FFE20EF64B006FEA2" box="[396,512,305,324]" italics="true" pageId="5" pageNumber="6">P. asturiensis</emphasis>
|
||
LMG
|
||
</taxonomicName>
|
||
26898
|
||
<superScript id="E691F674FF831A7FFDDCEF65B071FEDD" attach="none" box="[624,631,304,315]" fontSize="5" pageId="5" pageNumber="6">T</superScript>
|
||
; 6,
|
||
<taxonomicName id="D6E420BFFF831A7FFD35EF64B302FEB9" authority="LMG 1247 T. All" authorityName="LMG" authorityYear="1247" class="Alphaproteobacteria" family="Caulobacteraceae" genus="Pseudomonas" kingdom="Bacteria" order="Caulobacterales" pageId="5" pageNumber="6" phylum="Proteobacteria" rank="species" species="syringae">
|
||
<emphasis id="2390872EFF831A7FFD35EF64B0FEFEA2" box="[665,760,305,324]" italics="true" pageId="5" pageNumber="6">P. syringae</emphasis>
|
||
LMG 1247
|
||
<superScript id="E691F674FF831A7FFF74EF1EB2D9FEB0" attach="right" box="[216,223,331,342]" fontSize="5" pageId="5" pageNumber="6">T</superScript>
|
||
. All
|
||
</taxonomicName>
|
||
strains were negative for the production of arginine dihydrolase, and induced a hypersensitive reaction on tobacco. Data of columns 2–6 taken from Timilsina
|
||
<emphasis id="2390872EFF831A7FFE7DEFD4B3F8FE72" box="[465,510,385,404]" italics="true" pageId="5" pageNumber="6">et al.</emphasis>
|
||
[
|
||
<bibRefCitation id="757526CDFF831A7FFDA4EFD4B025FE72" author="Timilsina S & Minsavage GV & Preston J & Newberry EA & Paret ML" box="[520,547,385,404]" pageId="5" pageNumber="6" pagination="64 - 70" refId="ref6189" refString="32. Timilsina S, Minsavage GV, Preston J, Newberry EA, Paret ML, et al. Pseudomonas floridensis sp. nov., a bacterial pathogen isolated from tomato. Int J Syst Evol Microbiol 2018; 68: 64 - 70." type="journal article" year="2018">32</bibRefCitation>
|
||
]. +, Positive reaction; –, negative reaction; W, weakly positive reaction.
|
||
</paragraph>
|
||
</caption>
|
||
<paragraph id="115B5B3CFF831A7FFF26EF98B3D7FC53" pageId="5" pageNumber="6">
|
||
<table id="63E4A99CFF83E585FF26EF98B0DBFC53" box="[138,733,461,949]" gridcols="7" gridrows="11" pageId="5" pageNumber="6">
|
||
<tr id="AFD4597EFF83E585FF26EF98B0DBFE06" box="[138,733,461,480]" gridrow="0" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26EF98B37AFE06" box="[138,380,461,480]" gridcol="0" gridrow="0" pageId="5" pageNumber="6">
|
||
<emphasis id="2390872EFF831A7FFF26EF98B306FE06" bold="true" box="[138,256,461,480]" pageId="5" pageNumber="6">Characteristic</emphasis>
|
||
</th>
|
||
<th id="EC053002FF83E585FE12EF98B3D6FE06" box="[446,464,461,480]" gridcol="1" gridrow="0" pageId="5" pageNumber="6">
|
||
<emphasis id="2390872EFF831A7FFE12EF98B3D6FE06" bold="true" box="[446,464,461,480]" pageId="5" pageNumber="6">1*</emphasis>
|
||
</th>
|
||
<th id="EC053002FF83E585FE54EF98B002FE06" box="[504,516,461,480]" gridcol="2" gridrow="0" pageId="5" pageNumber="6">
|
||
<emphasis id="2390872EFF831A7FFE55EF98B005FE06" bold="true" box="[505,515,461,480]" pageId="5" pageNumber="6">2</emphasis>
|
||
</th>
|
||
<th id="EC053002FF83E585FD86EF98B03FFE06" box="[554,569,461,480]" gridcol="3" gridrow="0" pageId="5" pageNumber="6">
|
||
<emphasis id="2390872EFF831A7FFD81EF98B031FE06" bold="true" box="[557,567,461,480]" pageId="5" pageNumber="6">3</emphasis>
|
||
</th>
|
||
<th id="EC053002FF83E585FDCCEF98B06AFE06" box="[608,620,461,480]" gridcol="4" gridrow="0" pageId="5" pageNumber="6">
|
||
<emphasis id="2390872EFF831A7FFDCDEF98B06DFE06" bold="true" box="[609,619,461,480]" pageId="5" pageNumber="6">4</emphasis>
|
||
</th>
|
||
<th id="EC053002FF83E585FD3EEF98B0A6FE06" box="[658,672,461,480]" gridcol="5" gridrow="0" pageId="5" pageNumber="6">
|
||
<emphasis id="2390872EFF831A7FFD39EF98B099FE06" bold="true" box="[661,671,461,480]" pageId="5" pageNumber="6">5</emphasis>
|
||
</th>
|
||
<th id="EC053002FF83E585FD63EF98B0DBFE06" box="[719,733,461,480]" gridcol="6" gridrow="0" pageId="5" pageNumber="6">
|
||
<emphasis id="2390872EFF831A7FFD7DEF98B0DDFE06" bold="true" box="[721,731,461,480]" pageId="5" pageNumber="6">6</emphasis>
|
||
</th>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26EFACB0DBFDEA" box="[138,733,505,524]" gridrow="1" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26EFACB37AFDEA" box="[138,380,505,524]" gridcol="0" gridrow="1" pageId="5" pageNumber="6">Levan formation from sucrose</th>
|
||
<td id="EC053002FF83E585FE12EFACB3D6FDEA" box="[446,464,505,524]" gridcol="1" gridrow="1" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FE54EFACB002FDEA" box="[504,516,505,524]" gridcol="2" gridrow="1" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD86EFACB03FFDEA" box="[554,569,505,524]" gridcol="3" gridrow="1" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FDCCEFACB06AFDEA" box="[608,620,505,524]" gridcol="4" gridrow="1" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD3EEFACB0A6FDEA" box="[658,672,505,524]" gridcol="5" gridrow="1" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD63EFACB0DBFDEA" box="[719,733,505,524]" gridcol="6" gridrow="1" pageId="5" pageNumber="6">+</td>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26EC70B0DBFDDE" box="[138,733,549,568]" gridrow="2" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26EC70B37AFDDE" box="[138,380,549,568]" gridcol="0" gridrow="2" pageId="5" pageNumber="6">Oxidase</th>
|
||
<td id="EC053002FF83E585FE12EC70B3D6FDDE" box="[446,464,549,568]" gridcol="1" gridrow="2" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FE54EC70B002FDDE" box="[504,516,549,568]" gridcol="2" gridrow="2" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FD86EC70B03FFDDE" box="[554,569,549,568]" gridcol="3" gridrow="2" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FDCCEC70B06AFDDE" box="[608,620,549,568]" gridcol="4" gridrow="2" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD3EEC70B0A6FDDE" box="[658,672,549,568]" gridcol="5" gridrow="2" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD63EC70B0DBFDDE" box="[719,733,549,568]" gridcol="6" gridrow="2" pageId="5" pageNumber="6">–</td>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26EC04B0DBFD82" box="[138,733,593,612]" gridrow="3" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26EC04B37AFD82" box="[138,380,593,612]" gridcol="0" gridrow="3" pageId="5" pageNumber="6">Potato rot</th>
|
||
<td id="EC053002FF83E585FE12EC04B3D6FD82" box="[446,464,593,612]" gridcol="1" gridrow="3" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FE54EC04B002FD82" box="[504,516,593,612]" gridcol="2" gridrow="3" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD86EC04B03FFD82" box="[554,569,593,612]" gridcol="3" gridrow="3" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FDCCEC04B06AFD82" box="[608,620,593,612]" gridcol="4" gridrow="3" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FD3EEC04B0A6FD82" box="[658,672,593,612]" gridcol="5" gridrow="3" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD63EC04B0DBFD82" box="[719,733,593,612]" gridcol="6" gridrow="3" pageId="5" pageNumber="6">–</td>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26EC28B0DBFD76" box="[138,733,637,656]" gridrow="4" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26EC28B0DBFD76" box="[138,733,637,656]" colspan="7" colspanRight="6" gridcol="0" gridrow="4" pageId="5" pageNumber="6">Assimilation of (Biolog GEN III):</th>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26ECFCB0DBFD5A" box="[138,733,681,700]" gridrow="5" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26ECFCB37AFD5A" box="[138,380,681,700]" gridcol="0" gridrow="5" pageId="5" pageNumber="6">D-Sorbitol</th>
|
||
<td id="EC053002FF83E585FE12ECFCB3D6FD5A" box="[446,464,681,700]" gridcol="1" gridrow="5" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FE54ECFCB002FD5A" box="[504,516,681,700]" gridcol="2" gridrow="5" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD86ECFCB03FFD5A" box="[554,569,681,700]" gridcol="3" gridrow="5" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FDCCECFCB06AFD5A" box="[608,620,681,700]" gridcol="4" gridrow="5" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FD3EECFCB0A6FD5A" box="[658,672,681,700]" gridcol="5" gridrow="5" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD63ECFCB0DBFD5A" box="[719,733,681,700]" gridcol="6" gridrow="5" pageId="5" pageNumber="6">+</td>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26EC81B0DBFD0E" box="[138,733,724,744]" gridrow="6" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26EC81B37AFD0E" box="[138,380,724,744]" gridcol="0" gridrow="6" pageId="5" pageNumber="6">L-Galactonic acid</th>
|
||
<td id="EC053002FF83E585FE12EC81B3D6FD0E" box="[446,464,724,744]" gridcol="1" gridrow="6" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FE54EC81B002FD0E" box="[504,516,724,744]" gridcol="2" gridrow="6" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD86EC81B03FFD0E" box="[554,569,724,744]" gridcol="3" gridrow="6" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FDCCEC81B06AFD0E" box="[608,620,724,744]" gridcol="4" gridrow="6" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD3EEC81B0A6FD0E" box="[658,672,724,744]" gridcol="5" gridrow="6" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FD63EC81B0DBFD0E" box="[719,733,724,744]" gridcol="6" gridrow="6" pageId="5" pageNumber="6">w</td>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26ED54B0DBFCF2" box="[138,733,769,788]" gridrow="7" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26ED54B37AFCF2" box="[138,380,769,788]" gridcol="0" gridrow="7" pageId="5" pageNumber="6">D-Fucose</th>
|
||
<td id="EC053002FF83E585FE12ED54B3D6FCF2" box="[446,464,769,788]" gridcol="1" gridrow="7" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FE54ED54B002FCF2" box="[504,516,769,788]" gridcol="2" gridrow="7" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD86ED54B03FFCF2" box="[554,569,769,788]" gridcol="3" gridrow="7" pageId="5" pageNumber="6">W</td>
|
||
<td id="EC053002FF83E585FDCCED54B06AFCF2" box="[608,620,769,788]" gridcol="4" gridrow="7" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FD3EED54B0A6FCF2" box="[658,672,769,788]" gridcol="5" gridrow="7" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FD63ED54B0DBFCF2" box="[719,733,769,788]" gridcol="6" gridrow="7" pageId="5" pageNumber="6">+</td>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26ED79B0DBFCA6" box="[138,733,812,832]" gridrow="8" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26ED79B37AFCA6" box="[138,380,812,832]" gridcol="0" gridrow="8" pageId="5" pageNumber="6">Sucrose</th>
|
||
<td id="EC053002FF83E585FE12ED79B3D6FCA6" box="[446,464,812,832]" gridcol="1" gridrow="8" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FE54ED79B002FCA6" box="[504,516,812,832]" gridcol="2" gridrow="8" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD86ED79B03FFCA6" box="[554,569,812,832]" gridcol="3" gridrow="8" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FDCCED79B06AFCA6" box="[608,620,812,832]" gridcol="4" gridrow="8" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD3EED79B0A6FCA6" box="[658,672,812,832]" gridcol="5" gridrow="8" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD63ED79B0DBFCA6" box="[719,733,812,832]" gridcol="6" gridrow="8" pageId="5" pageNumber="6">+</td>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26ED0DB0DBFC8A" box="[138,733,856,876]" gridrow="9" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26ED0DB37AFC8A" box="[138,380,856,876]" gridcol="0" gridrow="9" pageId="5" pageNumber="6">Troleandomycin</th>
|
||
<td id="EC053002FF83E585FE12ED0DB3D6FC8A" box="[446,464,856,876]" gridcol="1" gridrow="9" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FE54ED0DB002FC8A" box="[504,516,856,876]" gridcol="2" gridrow="9" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD86ED0DB03FFC8A" box="[554,569,856,876]" gridcol="3" gridrow="9" pageId="5" pageNumber="6">+</td>
|
||
<td id="EC053002FF83E585FDCCED0DB06AFC8A" box="[608,620,856,876]" gridcol="4" gridrow="9" pageId="5" pageNumber="6">–</td>
|
||
<td id="EC053002FF83E585FD3EED0DB0DBFC8A" box="[658,733,856,876]" colspan="2" colspanRight="1" gridcol="5" gridrow="9" pageId="5" pageNumber="6">W W</td>
|
||
</tr>
|
||
<tr id="AFD4597EFF83E585FF26EDDDB0DBFC53" box="[138,733,904,949]" gridrow="10" pageId="5" pageNumber="6">
|
||
<th id="EC053002FF83E585FF26EDDDB0DBFC53" box="[138,733,904,949]" colspan="7" colspanRight="6" gridcol="0" gridrow="10" pageId="5" pageNumber="6">
|
||
*
|
||
<taxonomicName id="D6E420BFFF831A7FFF3DEDDDB34BFC7D" authorityName="Zhao & Koirala & Chen & Gitaitis & Kvitko & Dutta" authorityYear="2021" box="[145,333,904,923]" class="Alphaproteobacteria" family="Caulobacteraceae" genus="Pseudomonas" kingdom="Bacteria" order="Caulobacterales" pageId="5" pageNumber="6" phylum="Proteobacteria" rank="species" species="capsici">
|
||
<emphasis id="2390872EFF831A7FFF3DEDDDB34BFC7D" box="[145,333,904,923]" italics="true" pageId="5" pageNumber="6">Pseudomonas capsici</emphasis>
|
||
</taxonomicName>
|
||
strains Pc19-2 and Pc19-3 gave identical reactions for these tests as Pc19-1T.
|
||
</th>
|
||
</tr>
|
||
</table>
|
||
</paragraph>
|
||
<subSubSection id="59FE08B7FF831A7FFC35ECF6B677FCF1" pageId="5" pageNumber="6" type="description">
|
||
<paragraph id="115B5B3CFF831A7FFC35ECF6B677FCF1" blockId="5.[827,1473,183,791]" pageId="5" pageNumber="6">
|
||
<materialsCitation id="A18C5161FF831A7FFC35ECF6B677FCF1" ID-GBIF-Occurrence="4435834301" collectionCode="Pc" country="United States of America" location="Georgia" pageId="5" pageNumber="6" specimenCode="Pc19-1T" specimenCount="1" stateProvince="Georgia" typeStatus="holotype">
|
||
The
|
||
<typeStatus id="CE5FE59EFF831A7FFC61ECF6B1FBFD5D" box="[973,1021,675,699]" pageId="5" pageNumber="6">type</typeStatus>
|
||
strain,
|
||
<specimenCode id="4142F347FF831A7FFBF6ECF6B6B4FD49" box="[1114,1202,673,699]" collectionCode="Pc" pageId="5" pageNumber="6">
|
||
Pc19-1
|
||
<superScript id="E691F674FF831A7FFB04ECF4B6B4FD49" attach="left" box="[1192,1202,673,687]" fontSize="6" pageId="5" pageNumber="6">T</superScript>
|
||
</specimenCode>
|
||
(=LMG 32209
|
||
<superScript id="E691F674FF831A7FFAF3ECF4B76FFD49" attach="none" box="[1375,1385,673,687]" fontSize="6" pageId="5" pageNumber="6">T</superScript>
|
||
=CFBP 8884
|
||
<superScript id="E691F674FF831A7FFCDDEC95B17DFD28" attach="none" box="[881,891,704,718]" fontSize="6" pageId="5" pageNumber="6">T</superScript>
|
||
), was isolated from symptomatic pepper foliage in
|
||
<collectingRegion id="D32095DEFF831A7FFC90ECB5B190FD1E" box="[828,918,736,760]" pageId="5" pageNumber="6">Georgia</collectingRegion>
|
||
,
|
||
<collectingCountry id="69F31BACFF831A7FFC0DECB5B1D2FD1E" box="[929,980,736,760]" pageId="5" pageNumber="6">USA</collectingCountry>
|
||
in 2019. The genomic DNA G+C content of the type strain is 58.4 mol%.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |