169 lines
15 KiB
XML
169 lines
15 KiB
XML
<document id="FE45AAA00154A39C532A135DCA58563F" ID-DOI="10.12651/JSR.2020.9.1.035" ID-ISSN="2713-8615" ID-Zenodo-Dep="12753636" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="tatiana" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_approvedBy="tatiana" IM.taxonomicNames_approvedBy="tatiana" IM.treatments_approvedBy="tatiana" checkinTime="1721183779294" checkinUser="felipe" docAuthor="Kim, Pil Soo, Lee, Ki-Eun, Tak, Euon Jung & Bae, Myung-Suk Kang and Jin-Woo" docDate="2020" docId="03C58D12C81AFFA67DC8FA28FD2572D0" docLanguage="en" docName="JSpeciesRes.9.1.35-45.pdf" docOrigin="Journal of Species Research 9 (1)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Ochrobactrum pituitosum Huber et al. 2010" docType="treatment" docVersion="3" lastPageNumber="42" masterDocId="FFFCF56AC81CFFA17D66FD11FF8E7547" masterDocTitle="A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea" masterLastPageNumber="45" masterPageNumber="35" pageNumber="41" updateTime="1721635856593" updateUser="tatiana" zenodo-license-document="CC-BY-4.0">
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<mods:mods id="5D2E202E30A2E53C270A9158EEAFE89A" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="EFA64E4CFA2D848F30BD3F67C6AC0A62">
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<mods:title id="A5928D30DEE8136CB92584D10087D061">A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea</mods:title>
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</mods:titleInfo>
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<mods:name id="0CD299D6C5838EF4A810AEEDB60258E0" type="personal">
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<mods:roleTerm id="756989874E4D8F19BA399B2FBB66C58B">Author</mods:roleTerm>
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<mods:namePart id="4D1E099C649C34B39E6AC85429756F10">Kim, Pil Soo</mods:namePart>
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<mods:affiliation id="9177096AF9F7651C8CF56FDC7FF46683">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="409EC58977A4B22D7A05CDADAF2A42F0" type="personal">
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<mods:roleTerm id="A7FFA7E0EB2A927EA08DC6183CB15CF3">Author</mods:roleTerm>
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<mods:namePart id="2B665BE9924E61950FE6935570B33A7F">Lee, Ki-Eun</mods:namePart>
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<mods:affiliation id="C3FEA089D4BE6014A0FF0043E030214D">Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="194EA051713DE1274DA351A961839BA2" type="personal">
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<mods:roleTerm id="09F2F9CD3673EB0BAC39303301244152">Author</mods:roleTerm>
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<mods:namePart id="BC7CCBDC2E364FB5D8A020F52268D985">Tak, Euon Jung</mods:namePart>
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<mods:affiliation id="8CF883F8D56D00FA3D0D0EFE085D818E">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="866F985C2063A5108F09C207F1BA4EA2" type="personal">
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<mods:roleTerm id="B804D13C599709C4F62970FC6068BD0A">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="4D0B85BA2B45468F3D6FD8091F8E43F6">Bae, Myung-Suk Kang and Jin-Woo</mods:namePart>
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</mods:name>
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<mods:typeOfResource id="004A7982B5BF9B09A143B0DEB3778923">text</mods:typeOfResource>
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<mods:title id="E1D1CB1007D549294D654E386A01B4F6">Journal of Species Research</mods:title>
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<mods:part id="5DC42600E62BFE2C67105D37E5754EC7">
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<mods:date id="EAAFDC6AADCD5016B8E391B2B85A5452">2020</mods:date>
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<mods:detail id="A86C507D6D6DDE6E2C568DEDD7B7C92E" type="volume">
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<mods:number id="0C27BDBE9CEE162BADFE51FCF79EFB3A">9</mods:number>
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<mods:start id="62A14BE32CC92C7AF778F1F5E996A180">35</mods:start>
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<mods:classification id="715D75517AE071726FE6F962AA04796C">journal article</mods:classification>
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<mods:identifier id="79C2003BFC012E3D14B00B18ECCC0991" type="DOI">10.12651/JSR.2020.9.1.035</mods:identifier>
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<mods:identifier id="839A99119AB3D0E312F9DB2B23AF8F18" type="ISSN">2713-8615</mods:identifier>
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<mods:identifier id="F76DD53E26D0E49B2CAB8B914289DD36" type="Zenodo-Dep">12753636</mods:identifier>
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</mods:mods>
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<treatment id="03C58D12C81AFFA67DC8FA28FD2572D0" LSID="urn:lsid:plazi:treatment:03C58D12C81AFFA67DC8FA28FD2572D0" httpUri="http://treatment.plazi.org/id/03C58D12C81AFFA67DC8FA28FD2572D0" lastPageId="7" lastPageNumber="42" pageId="6" pageNumber="41">
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<subSubSection id="C3766F8FC81AFFA67DC8FA28FDA07251" lastPageId="7" lastPageNumber="42" pageId="6" pageNumber="41" type="nomenclature">
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<paragraph id="8BD33C04C81AFFA77DC8FA28FD557216" blockId="6.[174,731,1848,1873]" box="[174,731,1848,1873]" pageId="6" pageNumber="41">
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<heading id="D09B8B68C81AFFA77DC8FA28FD557216" box="[174,731,1848,1873]" fontSize="10" level="2" pageId="6" pageNumber="41" reason="5">
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<emphasis id="B918E016C81AFFA77DC8FA28FD557216" bold="true" box="[174,731,1848,1873]" pageId="6" pageNumber="41">
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Description of
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<taxonomicName id="4C6C4787C81AFFA77C33FA29FDFC7216" ID-CoL="48DSF" authority="Huber et al., 2010" authorityName="Huber et al." authorityYear="2010" box="[341,626,1848,1873]" class="Alphaproteobacteria" family="Brucellaceae" genus="Ochrobactrum" kingdom="Bacteria" order="Rhizobiales" pageId="6" pageNumber="41" phylum="Proteobacteria" rank="species" species="pituitosum">
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<emphasis id="B918E016C81AFFA77C33FA29FDFC7216" bold="true" box="[341,626,1848,1873]" italics="true" pageId="6" pageNumber="41">Ochrobactrum pituitosum</emphasis>
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</taxonomicName>
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M3
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<collectionCode id="ED7DA4C1C81AFFA77FF9FA28FD3C7216" box="[671,690,1849,1873]" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="6" pageNumber="41">R</collectionCode>
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205
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</emphasis>
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</heading>
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</paragraph>
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<paragraph id="8BD33C04C81AFFA67DA3FA7BFDA07251" blockId="6.[174,779,1898,1987]" lastBlockId="7.[144,749,1209,1944]" lastPageId="7" lastPageNumber="42" pageId="6" pageNumber="41">
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Cells are Gram-staining positive. Colonies are circular, smooth, convex, and yellowish-white colored after 2 days of incubation on
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<collectionCode id="ED7DA4C1C81AFFA77CFDFABBFE227285" box="[411,428,1962,1986]" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="6" pageNumber="41">R</collectionCode>
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2A agar at 20℃. Dextrin,
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<emphasis id="B918E016C81AFFA77FA3FABAFD597285" box="[709,727,1963,1986]" italics="true" pageId="6" pageNumber="41">N</emphasis>
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-acetyl-D- glucosamine,
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<emphasis id="B918E016C81AFFA77978FBD8FBBE73A7" box="[1054,1072,1737,1760]" italics="true" pageId="6" pageNumber="41">N</emphasis>
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-acetyl-D- galactosamine,
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<emphasis id="B918E016C81AFFA77821FBD8FAD973A7" box="[1351,1367,1737,1760]" italics="true" pageId="6" pageNumber="41">α</emphasis>
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-D- glucose, D- mannose, D- fructose, D- galactose, L- rhamnose, inosine, 1% sodium lactate,
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<emphasis id="B918E016C81AFFA7791DFA18FB297267" box="[1147,1191,1801,1824]" italics="true" pageId="6" pageNumber="41">myo</emphasis>
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-inositol, rifamycin SV, L- alanine, L- histidine, guanidinium chloride, tetrazolium blue, methyl pyruvate, lithium chloride, acetoacetic acid, acetic acid, glycyl-L- proline, L- aspartic acid, L- glutamic acid,
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<subScript id="17E83E41C81AFFA77EE2FA81FC1872E5" attach="right" box="[900,918,1930,1954]" fontSize="7" pageId="6" pageNumber="41">L-</subScript>
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serine,
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<subScript id="17E83E41C81AFFA77E8FFA81FC7572E5" attach="right" box="[1001,1019,1930,1954]" fontSize="7" pageId="6" pageNumber="41">L-</subScript>
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lactic acid,
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<subScript id="17E83E41C81AFFA77918FA81FB1B72E6" attach="right" box="[1150,1173,1930,1953]" fontSize="7" pageId="6" pageNumber="41">D-</subScript>
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malic acid,
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<subScript id="17E83E41C81AFFA77871FA81FAA772E5" attach="right" box="[1303,1321,1930,1954]" fontSize="7" pageId="6" pageNumber="41">L-</subScript>
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malic acid, bromosuccinic acid, propionic acid, aztreonam, D- fucose, L- fucose, troleandomycin, lincomycin, D- galacturonic acid, L- galactonic acid lactone, D- glucuronic acid, vancomycin, tetrazolium violet, potassium tellurite,
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<subScript id="17E83E41C81BFFA67FE7F811FD187056" attach="right" box="[641,662,1274,1297]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
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sorbitol, D- arabitol, niaproof 4, citric acid, and
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<emphasis id="B918E016C81BFFA67F5DF80AFDC47075" box="[571,586,1307,1330]" italics="true" pageId="7" pageNumber="42">γ</emphasis>
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-aminobutryric acid are utilized as the sole source of carbon. However, D- maltose, D- trehalose, D- cellobiose, gentiobiose, sucrose,
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<subScript id="17E83E41C81BFFA67DF6F890FF2970D5" attach="none" box="[144,167,1403,1426]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
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turanose,
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<subScript id="17E83E41C81BFFA67C71F890FEA070D5" attach="right" box="[279,302,1403,1426]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
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salicin, glycerol, pectin, nalidixic acid,
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<emphasis id="B918E016C81BFFA67DF6F88DFF2E70F4" box="[144,160,1436,1459]" italics="true" pageId="7" pageNumber="42">α</emphasis>
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-keto-butyric acid, sodium butyrate, D- mannitol, D- gluconic acid, 4-hydroxyphenylacetic acid, Tween 40,
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<emphasis id="B918E016C81BFFA67FD7F8ADFD4F7094" box="[689,705,1468,1491]" italics="true" pageId="7" pageNumber="42">α</emphasis>
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-hydroxybutyric acid, sodium bromate,
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<emphasis id="B918E016C81BFFA67F75F8CDFDAD70B4" box="[531,547,1500,1523]" italics="true" pageId="7" pageNumber="42">α</emphasis>
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-D- lactose,
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<emphasis id="B918E016C81BFFA67FFEF8CDFD2970B3" box="[664,679,1500,1524]" italics="true" pageId="7" pageNumber="42">β</emphasis>
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-
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<subScript id="17E83E41C81BFFA67FCBF8CDFF487354" attach="left" fontSize="7" pageId="7" pageNumber="42">methyl-D-</subScript>
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glucoside,
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<emphasis id="B918E016C81BFFA67C25F8ECFEDB7353" box="[323,341,1533,1556]" italics="true" pageId="7" pageNumber="42">N</emphasis>
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-acetyl-
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<emphasis id="B918E016C81BFFA67CCAF8EDFE357353" box="[428,443,1532,1556]" italics="true" pageId="7" pageNumber="42">β</emphasis>
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-
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<subScript id="17E83E41C81BFFA67CA3FB13FE527354" attach="none" box="[453,476,1532,1555]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
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mannosamine, 3-methyl glucose, fusidic acid, D- serine, D- glucose-6-phosphate, D- fructose-6-phosphate, minocycline, glucuronamide, stachyose,
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<subScript id="17E83E41C81BFFA67C60FB72FE927333" attach="right" box="[262,284,1629,1652]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
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raffinose,
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<subScript id="17E83E41C81BFFA67CE1FB72FE107333" attach="right" box="[391,414,1629,1652]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
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melibiose,
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<emphasis id="B918E016C81BFFA67F75FB4CFDAB7333" box="[531,549,1629,1652]" italics="true" pageId="7" pageNumber="42">N</emphasis>
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-acetyl neuraminic acid, D- aspartic acid, D- serine, gelatin, L- arginine, L- pyroglutamic acid, mucic acid, quinic acid, D- saccharic acid, D- lactic acid methyl ester,
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<emphasis id="B918E016C81BFFA67CC3FBAFFE3B7392" box="[421,437,1726,1749]" italics="true" pageId="7" pageNumber="42">α</emphasis>
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-keto-glutaric acid,
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<emphasis id="B918E016C81BFFA67FE4FBAFFD1F7391" box="[642,657,1726,1750]" italics="true" pageId="7" pageNumber="42">β</emphasis>
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-
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<subScript id="17E83E41C81BFFA67FFEFBAFFF3773B3" attach="left" fontSize="7" pageId="7" pageNumber="42">hydroxyl-D</subScript>
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,
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<subScript id="17E83E41C81BFFA67DA1FBF5FF5773B1" attach="right" box="[199,217,1758,1782]" fontSize="7" pageId="7" pageNumber="42">L-</subScript>
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butyric acid, and formic acid are not utilized as the sole source of carbon (Biolog
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<collectionCode id="ED7DA4C1C81BFFA67CAEFBEFFE707251" box="[456,510,1790,1814]" pageId="7" pageNumber="42">GEN</collectionCode>
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<collectionCode id="ED7DA4C1C81BFFA67F62FBEFFDAC7251" box="[516,546,1790,1814]" pageId="7" pageNumber="42">III</collectionCode>
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).
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</paragraph>
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</subSubSection>
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<caption id="DF136C8CC81BFFA67FDEF94CFCD17134" box="[696,863,1117,1139]" isContinuationCaption="true" pageId="7" pageNumber="42" startId="7.[696,729,1117,1139]" targetBox="[167,1393,258,1087]" targetPageId="7" targetType="figure">
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<paragraph id="8BD33C04C81BFFA67FDEF94CFCD17134" blockId="7.[696,863,1117,1139]" box="[696,863,1117,1139]" pageId="7" pageNumber="42">
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<emphasis id="B918E016C81BFFA67FDEF94CFD7A7135" bold="true" box="[696,756,1117,1139]" pageId="7" pageNumber="42">Fig. 2.</emphasis>
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Continued.
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</paragraph>
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</caption>
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<subSubSection id="C3766F8FC81BFFA67DC0FA0FFD2572D0" pageId="7" pageNumber="42" type="description">
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<paragraph id="8BD33C04C81BFFA67DC0FA0FFD2572D0" blockId="7.[144,749,1209,1944]" pageId="7" pageNumber="42">
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<materialsCitation id="3B043659C81BFFA67DC0FA0FFD1C72D0" collectionCode="R" collectorName="Strain M" country="South Korea" county="The" location="Siberian" municipality="Hwacheon" pageId="7" pageNumber="42" specimenCode="R205" specimenCount="1" stateProvince="Gangwon">
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<collectorName id="269959D2C81BFFA67DC0FA0FFE837271" box="[166,269,1822,1846]" pageId="7" pageNumber="42">Strain M</collectorName>
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3
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<specimenCode id="DBCA947FC81BFFA67C7FFA0FFED87271" box="[281,342,1822,1846]" collectionCode="R" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="7" pageNumber="42">R205</specimenCode>
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(= NIBRBAC000499689) was isolated from the feces of a
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<location id="8EB36ADFC81BFFA67CCFFA2EFD8D7210" LSID="urn:lsid:plazi:treatment:03C58D12C81AFFA67DC8FA28FD2572D0:8EB36ADFC81BFFA67CCFFA2EFD8D7210" box="[425,515,1855,1879]" country="South Korea" county="The" municipality="Hwacheon" name="Siberian" pageId="7" pageNumber="42" stateProvince="Gangwon">Siberian</location>
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musk deer (
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<taxonomicName id="4C6C4787C81BFFA67FEBFA2FFE807230" authorityName="Linnaeus" authorityYear="1758" class="Mammalia" family="Moschidae" genus="Moschus" kingdom="Animalia" order="Artiodactyla" pageId="7" pageNumber="42" phylum="Chordata" rank="species" species="moschiferus">
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<emphasis id="B918E016C81BFFA67FEBFA2FFE807230" italics="true" pageId="7" pageNumber="42">Moschus moschiferus</emphasis>
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</taxonomicName>
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),
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<collectingMunicipality id="6BB7A67EC81BFFA67C45FA4EFE187230" box="[291,406,1887,1911]" pageId="7" pageNumber="42">Hwacheon</collectingMunicipality>
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,
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<collectingRegion id="49A8F2E6C81BFFA67CC6FA4EFDE37230" box="[416,621,1887,1911]" country="South Korea" name="Gangwon" pageId="7" pageNumber="42">Gangwon Province</collectingRegion>
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,
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<collectingCountry id="F37B7C94C81BFFA67F11FA4EFD347231" box="[631,698,1887,1910]" name="South Korea" pageId="7" pageNumber="42">Korea</collectingCountry>
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.
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<collectingCounty id="62B24488C81BFFA67FA5FA4EFD627230" box="[707,748,1887,1911]" pageId="7" pageNumber="42">The</collectingCounty>
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DNA G + C content of the
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<typeStatus id="54D782A6C81BFFA67CCEFA91FE5B72DF" box="[424,469,1920,1944]" pageId="7" pageNumber="42">type</typeStatus>
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strain is 55.0 mol
|
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</materialsCitation>
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%.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |