Add updates up until 2024-07-22 08:11:30
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<treatment id="03C58D12C814FFA87E21FA52FDBB71C3" LSID="urn:lsid:plazi:treatment:03C58D12C814FFA87E21FA52FDBB71C3" httpUri="http://treatment.plazi.org/id/03C58D12C814FFA87E21FA52FDBB71C3" lastPageId="9" lastPageNumber="44" pageId="8" pageNumber="43">
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@ -60,10 +60,10 @@
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<heading id="D09B8B68C814FFA97E21FA52FAE1721C" box="[839,1391,1858,1883]" fontSize="10" level="2" pageId="8" pageNumber="43" reason="5">
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<emphasis id="B918E016C814FFA97E21FA52FAE1721C" bold="true" box="[839,1391,1858,1883]" pageId="8" pageNumber="43">
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Description of
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<taxonomicName id="4C6C4787C814FFA97E88FA53FAE1721C" authority="VT 2504" authorityName="VT" authorityYear="2504" box="[1006,1391,1858,1883]" class="Actinomycetia" family="Micrococcaceae" genus="Glutamicibacter" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Actinomycetales" pageId="8" pageNumber="43" phylum="Actinobacteriota" rank="species" species="mysorens">
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<taxonomicName id="4C6C4787C814FFA97E88FA53FA81721D" authority="(Nand & Rao, 1972)" baseAuthorityName="Nand & Rao" baseAuthorityYear="1972" box="[1006,1295,1858,1882]" class="Actinomycetia" family="Micrococcaceae" genus="Glutamicibacter" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Actinomycetales" pageId="8" pageNumber="43" phylum="Actinobacteriota" rank="species" species="mysorens">
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<emphasis id="B918E016C814FFA97E88FA53FA81721D" bold="true" box="[1006,1295,1858,1882]" italics="true" pageId="8" pageNumber="43">Glutamicibacter mysorens</emphasis>
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VT2504
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VT2504
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@ -119,7 +119,7 @@ ID 32
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<paragraph id="8BD33C04C815FFA87DC0F91AFDBB71C3" blockId="9.[144,749,261,1157]" pageId="9" pageNumber="44">
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<materialsCitation id="3B043659C815FFA87DC0F91AFD9271C3" collectorName="Strain VT" country="South Korea" location="Gyeonggi Province" pageId="9" pageNumber="44" specimenCount="1" stateProvince="Gyeonggi">
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<collectorName id="269959D2C815FFA87DC0F91AFE9A7164" box="[166,276,1035,1059]" pageId="9" pageNumber="44">Strain VT</collectorName>
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2504 (= NIBRBAC000499829) was isolat- ed from the feces of an Andean condor (
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2504 (= NIBRBAC000499829) was isolated from the feces of an Andean condor (
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<taxonomicName id="4C6C4787C815FFA87F26F93DFD537103" authorityName="Linnaeus" authorityYear="1758" box="[576,733,1068,1092]" class="Aves" family="Cathartidae" genus="Vultur" kingdom="Animalia" order="Accipitriformes" pageId="9" pageNumber="44" phylum="Chordata" rank="species" species="gryphus">
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<emphasis id="B918E016C815FFA87F26F93DFD537103" box="[576,733,1068,1092]" italics="true" pageId="9" pageNumber="44">Vultur gryphus</emphasis>
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</taxonomicName>
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@ -1,58 +1,58 @@
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<treatment id="03C58D12C814FFA97DC8FA52FB627646" LSID="urn:lsid:plazi:treatment:03C58D12C814FFA97DC8FA52FB627646" httpUri="http://treatment.plazi.org/id/03C58D12C814FFA97DC8FA52FB627646" lastPageNumber="43" pageId="8" pageNumber="43">
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<subSubSection id="C3766F8FC814FFA97DC8FA52FCF377C7" pageId="8" pageNumber="43" type="nomenclature">
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|
|
@ -60,10 +60,10 @@
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<heading id="D09B8B68C814FFA97DC8FA52FD49721C" box="[174,711,1858,1883]" fontSize="10" level="2" pageId="8" pageNumber="43" reason="5">
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<emphasis id="B918E016C814FFA97DC8FA52FD49721C" bold="true" box="[174,711,1858,1883]" pageId="8" pageNumber="43">
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Description of
|
||||
<taxonomicName id="4C6C4787C814FFA97C33FA53FD49721C" ID-CoL="4SF32" authority="VT 2414" authorityName="VT" authorityYear="2414" box="[341,711,1858,1883]" class="Actinobacteridae" family="Nocardiaceae" genus="Rhodococcus" kingdom="Bacteria" order="Actinomycetales" pageId="8" pageNumber="43" phylum="Actinobacteria" rank="species" species="phenolicus">
|
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<taxonomicName id="4C6C4787C814FFA97C33FA53FDE9721D" ID-CoL="4SF32" authority="Rehfuss & Urban, 2006" authorityName="Rehfuss & Urban" authorityYear="2006" box="[341,615,1858,1882]" class="Actinobacteridae" family="Nocardiaceae" genus="Rhodococcus" kingdom="Bacteria" order="Actinomycetales" pageId="8" pageNumber="43" phylum="Actinobacteria" rank="species" species="phenolicus">
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<emphasis id="B918E016C814FFA97C33FA53FDE9721D" bold="true" box="[341,615,1858,1882]" italics="true" pageId="8" pageNumber="43">Rhodococcus phenolicus</emphasis>
|
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VT2414
|
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</taxonomicName>
|
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VT2414
|
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</emphasis>
|
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</heading>
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</paragraph>
|
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|
|
@ -91,7 +91,7 @@ ID 32
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<paragraph id="8BD33C04C814FFA97E38FF99FB627646" blockId="8.[839,1444,261,770]" pageId="8" pageNumber="43">
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<materialsCitation id="3B043659C814FFA97E38FF99FB5D7646" collectorName="Strain VT" country="South Korea" location="Gyeonggi Province" pageId="8" pageNumber="43" specimenCount="1" stateProvince="Gyeonggi">
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<collectorName id="269959D2C814FFA97E38FF99FC4577E7" box="[862,971,648,672]" pageId="8" pageNumber="43">Strain VT</collectorName>
|
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2412 (= NIBRBAC000499827) was isolat- ed from the feces of an Andean condor (
|
||||
2412 (= NIBRBAC000499827) was isolated from the feces of an Andean condor (
|
||||
<taxonomicName id="4C6C4787C814FFA97991FFB9FA1A7787" authorityName="Linnaeus" authorityYear="1758" box="[1271,1428,680,704]" class="Aves" family="Cathartidae" genus="Vultur" kingdom="Animalia" order="Accipitriformes" pageId="8" pageNumber="43" phylum="Chordata" rank="species" species="gryphus">
|
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<emphasis id="B918E016C814FFA97991FFB9FA1A7787" box="[1271,1428,680,704]" italics="true" pageId="8" pageNumber="43">Vultur gryphus</emphasis>
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</taxonomicName>
|
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|
|
|
|||
159
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159
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<taxonomicName id="4C6C4787C814FFA97C33FF99FEB07787" ID-CoL="5LBML" authority="(Tsakalidou et al., 1998) Schlegel et al., 2003" authorityName="Schlegel et al." authorityYear="2003" baseAuthorityName="Tsakalidou et al." baseAuthorityYear="1998" class="Bacilli" family="Streptococcaceae" genus="Streptococcus" kingdom="Bacteria" order="Lactobacillales" pageId="8" pageNumber="43" phylum="Firmicutes" rank="subSpecies" species="gallolyticus" subSpecies="macedonicus">
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<emphasis id="B918E016C814FFA97C33FF99FDFD77E7" bold="true" box="[341,627,648,672]" italics="true" pageId="8" pageNumber="43">Streptococcus gallolyticus</emphasis>
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subsp.
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<emphasis id="B918E016C814FFA97DC8FFB9FEB07787" bold="true" box="[174,318,680,704]" italics="true" pageId="8" pageNumber="43">macedonicus</emphasis>
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</taxonomicName>
|
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M1
|
||||
<collectionCode id="ED7DA4C1C814FFA97C0FFFB9FEF47787" box="[361,378,680,704]" name="Tavera, Department of Geology and Geophysics" pageId="8" pageNumber="43">T</collectionCode>
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307
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<paragraph id="8BD33C04C814FFA97DA3FFC8FD9273DE" blockId="8.[174,779,729,1819]" pageId="8" pageNumber="43">
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Cells are Gram-staining positive. Colonies are circular, smooth, convex, and yellowish-white colored after 2 days of incubation on Tryptic soy agar (
|
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<collectionCode id="ED7DA4C1C814FFA97F73FE0BFDC77675" box="[533,585,794,818]" pageId="8" pageNumber="43">TSA</collectionCode>
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) at 37℃. Dextrin,
|
||||
<emphasis id="B918E016C814FFA97DC8FE2AFF4E7615" box="[174,192,827,850]" italics="true" pageId="8" pageNumber="43">N</emphasis>
|
||||
-acetyl-D- glucosamine, D- fructose, D- galactose, L- rhamnose, 1% sodium lactate, acetoacetic acid, aztreonam,
|
||||
<subScript id="17E83E41C814FFA97DC8FE90FF4B76D5" attach="none" box="[174,197,891,914]" fontSize="7" pageId="8" pageNumber="43">D-</subScript>
|
||||
fucose, potassium tellurite,
|
||||
<subScript id="17E83E41C814FFA97C91FE90FD8376D5" attach="right" box="[503,525,891,914]" fontSize="7" pageId="8" pageNumber="43">D-</subScript>
|
||||
trehalose,
|
||||
<subScript id="17E83E41C814FFA97F19FE90FD1876D5" attach="right" box="[639,662,891,914]" fontSize="7" pageId="8" pageNumber="43">D-</subScript>
|
||||
cellobiose, gentiobiose, sucrose, D- turanose, D- salicin, sodium butyrate, D- mannitol,
|
||||
<emphasis id="B918E016C814FFA97C3EFEAAFEE97694" box="[344,359,955,979]" italics="true" pageId="8" pageNumber="43">β</emphasis>
|
||||
-methyl-D- glucoside,
|
||||
<emphasis id="B918E016C814FFA97F21FEADFDD77694" box="[583,601,956,979]" italics="true" pageId="8" pageNumber="43">N</emphasis>
|
||||
-acetyl-
|
||||
<emphasis id="B918E016C814FFA97FCEFEAAFD397694" box="[680,695,955,979]" italics="true" pageId="8" pageNumber="43">β</emphasis>
|
||||
-D- mannosamine, D- serine, glucuronamide, stachyose, D- melibiose,
|
||||
<emphasis id="B918E016C814FFA97D9EFEECFE867153" box="[248,264,1021,1044]" italics="true" pageId="8" pageNumber="43">α</emphasis>
|
||||
-
|
||||
<subScript id="17E83E41C814FFA97C74F913FEA77154" attach="none" box="[274,297,1020,1043]" fontSize="7" pageId="8" pageNumber="43">D-</subScript>
|
||||
glucose,
|
||||
<subScript id="17E83E41C814FFA97CEBF913FE2D7154" attach="right" box="[397,419,1020,1043]" fontSize="7" pageId="8" pageNumber="43">D-</subScript>
|
||||
mannose, tetrazolium blue, vancomycin, tetrazolium violet, D- maltose, pectin, nalidixic acid,
|
||||
<emphasis id="B918E016C814FFA97D81F92CFF797113" box="[231,247,1085,1108]" italics="true" pageId="8" pageNumber="43">α</emphasis>
|
||||
-D- lactose, fusidic acid, and D- raffinose are utilized as the sole source of carbon.
|
||||
<emphasis id="B918E016C814FFA97C97F94CFD8D7133" box="[497,515,1117,1140]" italics="true" pageId="8" pageNumber="43">N</emphasis>
|
||||
-
|
||||
<subScript id="17E83E41C814FFA97F6CF94CFDE57133" attach="left" box="[522,619,1117,1141]" fontSize="7" pageId="8" pageNumber="43">acetyl-D-</subScript>
|
||||
galactosamine, inosine,
|
||||
<emphasis id="B918E016C814FFA97C6DF96FFEB671D2" box="[267,312,1150,1173]" italics="true" pageId="8" pageNumber="43">myo</emphasis>
|
||||
-inositol, L- alanine, L- histidine, methyl pyruvate, lithium chloride, acetic acid, glycyl-L- proline, L- aspartic acid, L- glutamic acid, L- serine, L- lactic acid,
|
||||
<subScript id="17E83E41C814FFA97DC8F9F5FF4A71B2" attach="none" box="[174,196,1246,1269]" fontSize="7" pageId="8" pageNumber="43">D-</subScript>
|
||||
malic acid,
|
||||
<subScript id="17E83E41C814FFA97C25F9F5FEDD71B1" attach="right" box="[323,339,1246,1270]" fontSize="7" pageId="8" pageNumber="43">L-</subScript>
|
||||
malic acid, bromosuccinic acid, propionic acid, L- fucose, D- galacturonic acid, L- galactonic acid lactone, D- glucuronic acid, D- arabitol, citric acid,
|
||||
<emphasis id="B918E016C814FFA97FA5F80EFD5C7071" box="[707,722,1311,1334]" italics="true" pageId="8" pageNumber="43">γ</emphasis>
|
||||
-amino-butryric acid, glycerol,
|
||||
<emphasis id="B918E016C814FFA97CA2F82EFE5A7011" box="[452,468,1343,1366]" italics="true" pageId="8" pageNumber="43">α</emphasis>
|
||||
-keto-butyric acid, D- gluconic acid, Tween 40,
|
||||
<emphasis id="B918E016C814FFA97C3EF871FEE67030" box="[344,360,1376,1399]" italics="true" pageId="8" pageNumber="43">α</emphasis>
|
||||
-hydroxybutyric acid, 3-methyl glucose, D- glucose-6-phosphate, D- fructose-6-phosphate,
|
||||
<emphasis id="B918E016C814FFA97FD7F891FD4D70D0" box="[689,707,1408,1431]" italics="true" pageId="8" pageNumber="43">N</emphasis>
|
||||
-acetyl neuraminic acid, D- aspartic acid, D- serine, gelatin, L- arginine, L- pyroglutamic acid, mucic acid, quinic acid, D- saccharic acid,
|
||||
<subScript id="17E83E41C814FFA97C5EF8F7FEC170B0" attach="right" box="[312,335,1504,1527]" fontSize="7" pageId="8" pageNumber="43">D-</subScript>
|
||||
lactic acid methyl ester,
|
||||
<emphasis id="B918E016C814FFA97F02F8F0FDFA70BF" box="[612,628,1505,1528]" italics="true" pageId="8" pageNumber="43">α</emphasis>
|
||||
-keto-glutaric acid,
|
||||
<emphasis id="B918E016C814FFA97D8EFB11FF79735F" box="[232,247,1536,1560]" italics="true" pageId="8" pageNumber="43">β</emphasis>
|
||||
-hydroxy-D, L- butyric acid, formic acid, rifamycin SV, guanidinium chloride, troleandomycin, lincomycin,
|
||||
<subScript id="17E83E41C814FFA97DC8FB56FF4A731F" attach="none" box="[174,196,1601,1624]" fontSize="7" pageId="8" pageNumber="43">D-</subScript>
|
||||
sorbitol, niaproof 4, 4-hydroxyphenylacetic acid, sodium bromate, and minocycline are not utilized as the sole source of carbon (Biolog
|
||||
<collectionCode id="ED7DA4C1C814FFA97CD3FB90FE6573DE" box="[437,491,1665,1689]" pageId="8" pageNumber="43">GEN</collectionCode>
|
||||
<collectionCode id="ED7DA4C1C814FFA97C94FB90FD9E73DE" box="[498,528,1665,1689]" pageId="8" pageNumber="43">III</collectionCode>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="C3766F8FC814FFA97DA3FBB0FD47725D" pageId="8" pageNumber="43" type="description">
|
||||
<paragraph id="8BD33C04C814FFA97DA3FBB0FD47725D" blockId="8.[174,779,729,1819]" pageId="8" pageNumber="43">
|
||||
<materialsCitation id="3B043659C814FFA97DA3FBB0FD3E725D" collectionCode="T" collectorName="Strain M" country="South Korea" county="The" location="Siberian" municipality="Hwacheon" pageId="8" pageNumber="43" specimenCode="T307" specimenCount="1" stateProvince="Gangwon">
|
||||
<collectorName id="269959D2C814FFA97DA3FBB0FEA273FD" box="[197,300,1697,1722]" pageId="8" pageNumber="43">Strain M</collectorName>
|
||||
1
|
||||
<specimenCode id="DBCA947FC814FFA97C53FBB3FEFD73FD" box="[309,371,1698,1722]" collectionCode="T" name="Tavera, Department of Geology and Geophysics" pageId="8" pageNumber="43">T307</specimenCode>
|
||||
(= NIBRBAC000499688) was isolated from the feces of a
|
||||
<location id="8EB36ADFC814FFA97CAEFBD3FDAC739D" LSID="urn:lsid:plazi:treatment:03C58D12C814FFA97DC8FF99FD47725D:8EB36ADFC814FFA97CAEFBD3FDAC739D" box="[456,546,1730,1754]" country="South Korea" county="The" municipality="Hwacheon" name="Siberian" pageId="8" pageNumber="43" stateProvince="Gangwon">Siberian</location>
|
||||
musk deer (
|
||||
<taxonomicName id="4C6C4787C814FFA97FCDFBD3FEA273BD" authorityName="Linnaeus" authorityYear="1758" class="Mammalia" family="Moschidae" genus="Moschus" kingdom="Animalia" order="Artiodactyla" pageId="8" pageNumber="43" phylum="Chordata" rank="species" species="moschiferus">
|
||||
<emphasis id="B918E016C814FFA97FCDFBD3FEA273BD" italics="true" pageId="8" pageNumber="43">Moschus moschiferus</emphasis>
|
||||
</taxonomicName>
|
||||
),
|
||||
<collectingMunicipality id="6BB7A67EC814FFA97C24FBF3FE3B73BD" box="[322,437,1762,1786]" pageId="8" pageNumber="43">Hwacheon</collectingMunicipality>
|
||||
,
|
||||
<collectingRegion id="49A8F2E6C814FFA97CD9FBF3FD0573BD" box="[447,651,1762,1786]" country="South Korea" name="Gangwon" pageId="8" pageNumber="43">Gangwon Province</collectingRegion>
|
||||
,
|
||||
<collectingCountry id="F37B7C94C814FFA97FF3FBF2FD5673BD" box="[661,728,1763,1786]" name="South Korea" pageId="8" pageNumber="43">Korea</collectingCountry>
|
||||
.
|
||||
<collectingCounty id="62B24488C814FFA97F84FBF3FC8573BD" box="[738,779,1762,1786]" pageId="8" pageNumber="43">The</collectingCounty>
|
||||
DNA G + C content of the
|
||||
<typeStatus id="54D782A6C814FFA97CA0FA12FE7D725C" box="[454,499,1795,1819]" pageId="8" pageNumber="43">type</typeStatus>
|
||||
strain is 38.3 mol
|
||||
</materialsCitation>
|
||||
%.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
</treatment>
|
||||
</document>
|
||||
|
|
@ -1,58 +1,58 @@
|
|||
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|
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|
||||
<mods:namePart id="8653EBDAE2F7127D4E5746D7F7ED4612">Tak, Euon Jung</mods:namePart>
|
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|
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<mods:namePart id="DAD8BE3A8D6D5799931FB60F166E0987">Bae, Myung-Suk Kang and Jin-Woo</mods:namePart>
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|
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<mods:number id="F3E47CFC4AE4874BD5668EA9EADDD78E">1</mods:number>
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|
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|
|
@ -60,10 +60,10 @@
|
|||
<heading id="D09B8B68C814FFA97E21FE38FA0E7605" box="[839,1408,809,834]" fontSize="10" level="2" pageId="8" pageNumber="43" reason="5">
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<emphasis id="B918E016C814FFA97E21FE38FA0E7605" bold="true" box="[839,1408,809,834]" pageId="8" pageNumber="43">
|
||||
Description of
|
||||
<taxonomicName id="4C6C4787C814FFA97E88FE38FA0E7605" authority="VT 2418" authorityName="VT" authorityYear="2418" box="[1006,1408,809,834]" class="Bacilli" family="Carnobacteriaceae" genus="Brevibacterium" kingdom="Bacteria" order="Lactobacillales" pageId="8" pageNumber="43" phylum="Firmicutes" rank="species" species="siliguriense">
|
||||
<taxonomicName id="4C6C4787C814FFA97E88FE38FA907606" authority="Kumar et al., 2013" authorityName="Kumar et al." authorityYear="2013" box="[1006,1310,809,833]" class="Bacilli" family="Carnobacteriaceae" genus="Brevibacterium" kingdom="Bacteria" order="Lactobacillales" pageId="8" pageNumber="43" phylum="Firmicutes" rank="species" species="siliguriense">
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<emphasis id="B918E016C814FFA97E88FE38FA907606" bold="true" box="[1006,1310,809,833]" italics="true" pageId="8" pageNumber="43">Brevibacterium siliguriense</emphasis>
|
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VT2418
|
||||
</taxonomicName>
|
||||
VT2418
|
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</emphasis>
|
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</heading>
|
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</paragraph>
|
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|
|
@ -133,7 +133,7 @@ ID 32
|
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<paragraph id="8BD33C04C814FFA97E38FBB0FB62725D" blockId="8.[839,1445,859,1819]" pageId="8" pageNumber="43">
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<materialsCitation id="3B043659C814FFA97E38FBB0FB5D725D" collectorName="Strain VT" country="South Korea" location="Gyeonggi Province" pageId="8" pageNumber="43" specimenCount="1" stateProvince="Gyeonggi">
|
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<collectorName id="269959D2C814FFA97E38FBB0FC4573FD" box="[862,971,1697,1722]" pageId="8" pageNumber="43">Strain VT</collectorName>
|
||||
2418 (= NIBRBAC000499828) was isolat- ed from the feces of an Andean condor (
|
||||
2418 (= NIBRBAC000499828) was isolated from the feces of an Andean condor (
|
||||
<taxonomicName id="4C6C4787C814FFA97991FBD3FA1A739D" authorityName="Linnaeus" authorityYear="1758" box="[1271,1428,1730,1754]" class="Aves" family="Cathartidae" genus="Vultur" kingdom="Animalia" order="Accipitriformes" pageId="8" pageNumber="43" phylum="Chordata" rank="species" species="gryphus">
|
||||
<emphasis id="B918E016C814FFA97991FBD3FA1A739D" box="[1271,1428,1730,1754]" italics="true" pageId="8" pageNumber="43">Vultur gryphus</emphasis>
|
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</taxonomicName>
|
||||
|
|
|
|||
|
|
@ -1,58 +1,58 @@
|
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<mods:namePart id="39E2CDDF7B5A1E13C7EE37C685EF09E8">Kim, Pil Soo</mods:namePart>
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<mods:namePart id="36874573E835CCE12A9B2BF0CE6C1D77">Tak, Euon Jung</mods:namePart>
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<mods:namePart id="B64187CF4A9EB9F33D23B6BACE7C74E1">Tak, Euon Jung</mods:namePart>
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<treatment id="03C58D12C815FFA87DF6F9BCFDB972DC" LSID="urn:lsid:plazi:treatment:03C58D12C815FFA87DF6F9BCFDB972DC" httpUri="http://treatment.plazi.org/id/03C58D12C815FFA87DF6F9BCFDB972DC" lastPageNumber="44" pageId="9" pageNumber="44">
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@ -60,10 +60,10 @@
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<heading id="D09B8B68C815FFA87DF6F9BCFD0A7182" box="[144,644,1196,1221]" fontSize="10" level="2" pageId="9" pageNumber="44" reason="5">
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Description of
|
||||
<taxonomicName id="4C6C4787C815FFA87C51F9BDFD0A7182" ID-CoL="GY9C" authority="VM 2501" authorityName="VM" authorityYear="2501" box="[311,644,1196,1221]" class="Actinobacteridae" family="Micrococcaceae" genus="Arthrobacter" kingdom="Bacteria" order="Actinomycetales" pageId="9" pageNumber="44" phylum="Actinobacteria" rank="species" species="rhombi">
|
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<taxonomicName id="4C6C4787C815FFA87C51F9BDFD927183" ID-CoL="GY9C" authority="Osorio et al., 1999" authorityName="Osorio et al." authorityYear="1999" box="[311,540,1196,1220]" class="Actinobacteridae" family="Micrococcaceae" genus="Arthrobacter" kingdom="Bacteria" order="Actinomycetales" pageId="9" pageNumber="44" phylum="Actinobacteria" rank="species" species="rhombi">
|
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<emphasis id="B918E016C815FFA87C51F9BDFD927183" bold="true" box="[311,540,1196,1220]" italics="true" pageId="9" pageNumber="44">Arthrobacter rhombi</emphasis>
|
||||
VM2501
|
||||
</taxonomicName>
|
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VM2501
|
||||
</emphasis>
|
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</heading>
|
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</paragraph>
|
||||
|
|
@ -101,7 +101,7 @@ ID 32
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<paragraph id="8BD33C04C815FFA87DC0FA32FDB972DC" blockId="9.[144,749,1246,1948]" pageId="9" pageNumber="44">
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<materialsCitation id="3B043659C815FFA87DC0FA32FD9072DC" collectorName="Strain VM" country="South Korea" location="Gyeonggi Province" pageId="9" pageNumber="44" specimenCount="1" stateProvince="Gyeonggi">
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<collectorName id="269959D2C815FFA87DC0FA32FE94727D" box="[166,282,1826,1851]" pageId="9" pageNumber="44">Strain VM</collectorName>
|
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2501 (= NIBRBAC000499830) was isolat- ed from the feces of an Andean condor (
|
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2501 (= NIBRBAC000499830) was isolated from the feces of an Andean condor (
|
||||
<taxonomicName id="4C6C4787C815FFA87F26FA52FD53721C" authorityName="Linnaeus" authorityYear="1758" box="[576,733,1859,1883]" class="Aves" family="Cathartidae" genus="Vultur" kingdom="Animalia" order="Accipitriformes" pageId="9" pageNumber="44" phylum="Chordata" rank="species" species="gryphus">
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<emphasis id="B918E016C815FFA87F26FA52FD53721C" box="[576,733,1859,1883]" italics="true" pageId="9" pageNumber="44">Vultur gryphus</emphasis>
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</taxonomicName>
|
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|
|
|
|||
|
|
@ -1,58 +1,58 @@
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<treatment id="03C58D12C815FFA87E4FFC14FB407071" LSID="urn:lsid:plazi:treatment:03C58D12C815FFA87E4FFC14FB407071" httpUri="http://treatment.plazi.org/id/03C58D12C815FFA87E4FFC14FB407071" lastPageNumber="44" pageId="9" pageNumber="44">
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@ -60,11 +60,10 @@
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Description of
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<taxonomicName id="4C6C4787C815FFA87EAAFC14FB7C745A" authority="VM" authorityName="VM" box="[972,1266,261,285]" class="Gammaproteobacteria" family="Enterobacteriaceae" genus="Escherichia" kingdom="Bacteria" order="Enterobacteriales" pageId="9" pageNumber="44" phylum="Proteobacteria" rank="species" species="marmotae">
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<taxonomicName id="4C6C4787C815FFA87EAAFC14FB4F745B" authority="Liu et al., 2015" authorityName="Liu et al." authorityYear="2015" box="[972,1217,261,285]" class="Gammaproteobacteria" family="Enterobacteriaceae" genus="Escherichia" kingdom="Bacteria" order="Enterobacteriales" pageId="9" pageNumber="44" phylum="Proteobacteria" rank="species" species="marmotae">
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VM
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3408
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VM3408
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@ -148,7 +147,7 @@ ID 32
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<materialsCitation id="3B043659C815FFA87E26F9ACFB3B7071" collectorName="Strain VM" country="South Korea" location="Gyeonggi Province" pageId="9" pageNumber="44" specimenCount="1" stateProvince="Gyeonggi">
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3408 (= NIBRBAC000499831) was isolat- ed from the feces of an Andean condor (
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3408 (= NIBRBAC000499831) was isolated from the feces of an Andean condor (
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<taxonomicName id="4C6C4787C815FFA879BFF9CFFAF871B1" authorityName="Linnaeus" authorityYear="1758" box="[1241,1398,1246,1270]" class="Aves" family="Cathartidae" genus="Vultur" kingdom="Animalia" order="Accipitriformes" pageId="9" pageNumber="44" phylum="Chordata" rank="species" species="gryphus">
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<emphasis id="B918E016C815FFA879BFF9CFFAF871B1" box="[1241,1398,1246,1270]" italics="true" pageId="9" pageNumber="44">Vultur gryphus</emphasis>
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</taxonomicName>
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|
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159
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<mods:date id="A1C9EB3CFC0D326E41F3FBC2B5A6D953">2020</mods:date>
|
||||
<mods:detail id="594D47516155EF23A5D68224729B48B2" type="volume">
|
||||
<mods:number id="1AF2AA98504A5846D1A1851F3529DE09">9</mods:number>
|
||||
</mods:detail>
|
||||
<mods:detail id="E94B5F6E1418DCF355CDB39D43B0C66C" type="issue">
|
||||
<mods:number id="D7BB72BBEFD2D7EECF673FBDDFA048F7">1</mods:number>
|
||||
</mods:detail>
|
||||
<mods:extent id="A363A0346718E774455E4BDCB416C396" unit="page">
|
||||
<mods:start id="4520FF739A775BC67705FE34915E84B1">35</mods:start>
|
||||
<mods:end id="AA3F38676F95E259490798BB4611E3BF">45</mods:end>
|
||||
</mods:extent>
|
||||
</mods:part>
|
||||
</mods:relatedItem>
|
||||
<mods:classification id="1ABB85F958ACADBF2B53372DF5EF7900">journal article</mods:classification>
|
||||
<mods:identifier id="151F15F1D1EF7CB467B2618185AC5AE7" type="DOI">10.12651/JSR.2020.9.1.035</mods:identifier>
|
||||
<mods:identifier id="9166657216C40CECC5F975359244D5EA" type="ISSN">2713-8615</mods:identifier>
|
||||
<mods:identifier id="AD7C119E2405B88DD823041AF19D29C2" type="Zenodo-Dep">12753636</mods:identifier>
|
||||
</mods:mods>
|
||||
<treatment id="03C58D12C819FFA77DF6F8D7FD477247" LSID="urn:lsid:plazi:treatment:03C58D12C819FFA77DF6F8D7FD477247" httpUri="http://treatment.plazi.org/id/03C58D12C819FFA77DF6F8D7FD477247" lastPageId="6" lastPageNumber="40" pageId="5" pageNumber="40">
|
||||
<subSubSection id="C3766F8FC819FFA47DF6F8D7FBBE7235" pageId="5" pageNumber="40" type="nomenclature">
|
||||
<paragraph id="8BD33C04C819FFA47DF6F8D7FD3D7099" blockId="5.[144,691,1477,1502]" box="[144,691,1477,1502]" pageId="5" pageNumber="40">
|
||||
<heading id="D09B8B68C819FFA47DF6F8D7FD3D7099" box="[144,691,1477,1502]" fontSize="10" level="2" pageId="5" pageNumber="40" reason="5">
|
||||
<emphasis id="B918E016C819FFA47DF6F8D7FD3D7099" bold="true" box="[144,691,1477,1502]" pageId="5" pageNumber="40">
|
||||
Description of
|
||||
<taxonomicName id="4C6C4787C819FFA47C51F8D4FDC7709A" ID-CoL="42RPB" authority="(Schumann, 1999)" baseAuthorityName="Schumann" baseAuthorityYear="1999" box="[311,585,1477,1501]" class="Actinobacteridae" family="Microbacteriaceae" genus="Microbacterium" kingdom="Bacteria" order="Actinomycetales" pageId="5" pageNumber="40" phylum="Actinobacteria" rank="species" species="oxydans">
|
||||
<emphasis id="B918E016C819FFA47C51F8D4FDC7709A" bold="true" box="[311,585,1477,1501]" italics="true" pageId="5" pageNumber="40">Microbacterium oxydans</emphasis>
|
||||
</taxonomicName>
|
||||
M3
|
||||
<collectionCode id="ED7DA4C1C819FFA47F10F8D7FD077099" box="[630,649,1478,1502]" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="5" pageNumber="40">R</collectionCode>
|
||||
204
|
||||
</emphasis>
|
||||
</heading>
|
||||
</paragraph>
|
||||
<paragraph id="8BD33C04C819FFA47DC0F8E6FBBE7235" blockId="5.[144,749,1527,1970]" lastBlockId="5.[809,1414,1397,1970]" pageId="5" pageNumber="40">
|
||||
Cells are Gram-staining positive. Colonies are circular, raised, entire, and white colored after 2 days of incubation on
|
||||
<collectionCode id="ED7DA4C1C819FFA47DD2FB26FF487308" box="[180,198,1591,1615]" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="5" pageNumber="40">R</collectionCode>
|
||||
2A agar at 20℃. Dextrin, D- Maltose, D- trehalose, D- cellobiose, gentiobiose, sucrose, D- turanose, D- salicin,
|
||||
<subScript id="17E83E41C819FFA47DA5FB6FFF5573C8" attach="right" box="[195,219,1656,1679]" fontSize="7" pageId="5" pageNumber="40">D-</subScript>
|
||||
mannose,
|
||||
<subScript id="17E83E41C819FFA47C36FB6FFEE673C8" attach="right" box="[336,360,1656,1679]" fontSize="7" pageId="5" pageNumber="40">D-</subScript>
|
||||
fructose,
|
||||
<emphasis id="B918E016C819FFA47CB3FB68FE6973D7" box="[469,487,1657,1680]" italics="true" pageId="5" pageNumber="40">N</emphasis>
|
||||
-
|
||||
<subScript id="17E83E41C819FFA47C89FB69FDD873C8" attach="left" box="[495,598,1656,1680]" fontSize="7" pageId="5" pageNumber="40">acetyl-D-</subScript>
|
||||
glucosamine,
|
||||
<emphasis id="B918E016C819FFA47DF6FB88FF2C73F7" box="[144,162,1689,1712]" italics="true" pageId="5" pageNumber="40">N</emphasis>
|
||||
-acetyl-D- galactosamine,
|
||||
<emphasis id="B918E016C819FFA47CA1FB88FE5973F7" box="[455,471,1689,1712]" italics="true" pageId="5" pageNumber="40">α</emphasis>
|
||||
-D- glucose, D- galactose, L- rhamnose, inosine, 1% sodium lactate,
|
||||
<emphasis id="B918E016C819FFA47F3BFBA8FD047397" box="[605,650,1721,1744]" italics="true" pageId="5" pageNumber="40">myo</emphasis>
|
||||
-inositol, glycerol, rifamycin SV, L- alanine, L- histidine, guanidinium chloride, pectin, tetrazolium blue, methyl pyruvate, nalidixic acid, lithium chloride,
|
||||
<emphasis id="B918E016C819FFA47C8BFA0BFE737276" box="[493,509,1818,1841]" italics="true" pageId="5" pageNumber="40">α</emphasis>
|
||||
-keto-butyric acid, acetoacetic acid, acetic acid, sodium butyrate, D- mannitol,
|
||||
<subScript id="17E83E41C819FFA47DF6FA4BFF607235" attach="left" box="[144,238,1882,1906]" fontSize="7" pageId="5" pageNumber="40">glycyl-L-</subScript>
|
||||
proline,
|
||||
<subScript id="17E83E41C819FFA47C2AFA71FED07235" attach="right" box="[332,350,1882,1906]" fontSize="7" pageId="5" pageNumber="40">L-</subScript>
|
||||
aspartic acid,
|
||||
<subScript id="17E83E41C819FFA47C9FFA71FD857235" attach="right" box="[505,523,1882,1906]" fontSize="7" pageId="5" pageNumber="40">L-</subScript>
|
||||
glutamic acid,
|
||||
<subScript id="17E83E41C819FFA47FD6FA71FD4D7236" attach="right" box="[688,707,1882,1905]" fontSize="7" pageId="5" pageNumber="40">L-</subScript>
|
||||
serine, D- gluconic acid, 4-hydroxyphenylacetic acid, L- lactic acid, D- malic acid, L- malic acid, bromosuccinic acid, Tween 40,
|
||||
<emphasis id="B918E016C819FFA47EC7F867FC3F70CA" box="[929,945,1398,1421]" italics="true" pageId="5" pageNumber="40">α</emphasis>
|
||||
-hydroxybutyric acid, propionic acid, aztreonam, and sodium bromate are utilized as the sole source of carbon.
|
||||
<emphasis id="B918E016C819FFA47EC6F8A6FC3E7089" box="[928,944,1463,1486]" italics="true" pageId="5" pageNumber="40">α</emphasis>
|
||||
-D- lactose,
|
||||
<emphasis id="B918E016C819FFA4794CF8A7FBB77089" box="[1066,1081,1462,1486]" italics="true" pageId="5" pageNumber="40">β</emphasis>
|
||||
-methyl-D- glucoside,
|
||||
<emphasis id="B918E016C819FFA47844F8A6FABA7089" box="[1314,1332,1463,1486]" italics="true" pageId="5" pageNumber="40">N</emphasis>
|
||||
-
|
||||
<emphasis id="B918E016C819FFA4785DF8A7FCB670A9" italics="true" pageId="5" pageNumber="40">acetylβ</emphasis>
|
||||
-D- mannosamine, 3-methyl glucose, D- fucose, L- fucose, fusidic acid, D- serine, D- glucose-6-phosphate, D- fructose-6-phosphate, troleandomycin, minocycline, lincomycin, D- galacturonic acid, L- galactonic acid lactone, D- glucuronic acid, glucuronamide, vancomycin, tetrazolium violet, potassium tellurite, stachyose, D- raffinose, D- melibiose,
|
||||
<emphasis id="B918E016C819FFA47E1FFB88FC0573F7" box="[889,907,1689,1712]" italics="true" pageId="5" pageNumber="40">N</emphasis>
|
||||
-acetyl neuraminic acid,
|
||||
<subScript id="17E83E41C819FFA479FBFB8FFB3D73E8" attach="right" box="[1181,1203,1688,1711]" fontSize="7" pageId="5" pageNumber="40">D-</subScript>
|
||||
sorbitol,
|
||||
<subScript id="17E83E41C819FFA47870FB8FFAA273E8" attach="right" box="[1302,1324,1688,1711]" fontSize="7" pageId="5" pageNumber="40">D-</subScript>
|
||||
arabitol, D- aspartic acid, D- serine, gelatin, L- arginine, L- pyroglutamic acid, niaproof 4, mucic acid, quinic acid, D- saccharic acid, D- lactic acid methyl ester, citric acid,
|
||||
<emphasis id="B918E016C819FFA4786BFBE8FA937257" box="[1293,1309,1785,1808]" italics="true" pageId="5" pageNumber="40">α</emphasis>
|
||||
-keto-glutaric acid,
|
||||
<emphasis id="B918E016C819FFA47EFBFA0BFC227276" box="[925,940,1818,1841]" italics="true" pageId="5" pageNumber="40">γ</emphasis>
|
||||
-aminobutryric acid,
|
||||
<emphasis id="B918E016C819FFA479F6FA08FB117276" box="[1168,1183,1817,1841]" italics="true" pageId="5" pageNumber="40">β</emphasis>
|
||||
-
|
||||
<subScript id="17E83E41C819FFA479C3FA08FA987268" attach="left" box="[1189,1302,1817,1841]" fontSize="7" pageId="5" pageNumber="40">hydroxy-D</subScript>
|
||||
,
|
||||
<subScript id="17E83E41C819FFA47840FA0EFAB67276" attach="right" box="[1318,1336,1817,1841]" fontSize="7" pageId="5" pageNumber="40">L-</subScript>
|
||||
butyric acid, and formic acid are not utilized as the sole source of carbon (Biolog
|
||||
<collectionCode id="ED7DA4C1C819FFA47EACFA4BFB8E7235" box="[970,1024,1882,1906]" pageId="5" pageNumber="40">GEN</collectionCode>
|
||||
<collectionCode id="ED7DA4C1C819FFA47960FA4BFBAA7235" box="[1030,1060,1882,1906]" pageId="5" pageNumber="40">III</collectionCode>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="C3766F8FC819FFA77E26FA6BFD477247" lastPageId="6" lastPageNumber="41" pageId="5" pageNumber="40" type="description">
|
||||
<paragraph id="8BD33C04C819FFA77E26FA6BFD477247" blockId="5.[809,1414,1397,1970]" lastBlockId="6.[174,779,1736,1793]" lastPageId="6" lastPageNumber="41" pageId="5" pageNumber="40">
|
||||
<materialsCitation id="3B043659C819FFA77E26FA6BFD3E7247" collectionCode="R" collectorName="Strain M" country="South Korea" county="The" lastPageId="6" lastPageNumber="41" location="Siberian" municipality="Hwacheon" pageId="5" pageNumber="40" specimenCode="R204" specimenCount="1" stateProvince="Gangwon">
|
||||
<collectorName id="269959D2C819FFA47E26FA6BFC2872D5" box="[832,934,1914,1938]" pageId="5" pageNumber="40">Strain M</collectorName>
|
||||
3
|
||||
<specimenCode id="DBCA947FC819FFA47ED4FA6BFC6172D5" box="[946,1007,1914,1938]" collectionCode="R" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="5" pageNumber="40">R204</specimenCode>
|
||||
(= NIBRBAC000499672) was isolated from the feces of a
|
||||
<location id="8EB36ADFC819FFA47925FA8BFB1372F5" LSID="urn:lsid:plazi:treatment:03C58D12C819FFA77DF6F8D7FD477247:8EB36ADFC819FFA47925FA8BFB1372F5" box="[1091,1181,1946,1970]" country="South Korea" county="The" municipality="Hwacheon" name="Siberian" pageId="5" pageNumber="40" stateProvince="Gangwon">Siberian</location>
|
||||
musk deer (
|
||||
<taxonomicName id="4C6C4787C819FFA77840FA8BFEA273A7" authorityName="Linnaeus" authorityYear="1758" class="Mammalia" family="Moschidae" genus="Moschus" kingdom="Animalia" lastPageId="6" lastPageNumber="41" order="Artiodactyla" pageId="5" pageNumber="40" phylum="Chordata" rank="species" species="moschiferus">
|
||||
<emphasis id="B918E016C819FFA77840FA8BFEA273A7" italics="true" lastPageId="6" lastPageNumber="41" pageId="5" pageNumber="40">Moschus moschiferus</emphasis>
|
||||
</taxonomicName>
|
||||
),
|
||||
<collectingMunicipality id="6BB7A67EC81AFFA77C24FBD9FE3B73A7" box="[322,437,1736,1760]" pageId="6" pageNumber="41">Hwacheon</collectingMunicipality>
|
||||
,
|
||||
<collectingRegion id="49A8F2E6C81AFFA77CD9FBD9FD0573A7" box="[447,651,1736,1760]" country="South Korea" name="Gangwon" pageId="6" pageNumber="41">Gangwon Province</collectingRegion>
|
||||
,
|
||||
<collectingCountry id="F37B7C94C81AFFA77FF3FBD8FD5673A7" box="[661,728,1737,1760]" name="South Korea" pageId="6" pageNumber="41">Korea</collectingCountry>
|
||||
.
|
||||
<collectingCounty id="62B24488C81AFFA77F84FBD9FC8573A7" box="[738,779,1736,1760]" pageId="6" pageNumber="41">The</collectingCounty>
|
||||
DNA G + C content of the
|
||||
<typeStatus id="54D782A6C81AFFA77CA0FBF8FE7D7246" box="[454,499,1769,1793]" pageId="6" pageNumber="41">type</typeStatus>
|
||||
strain is 72.9 mol
|
||||
</materialsCitation>
|
||||
%.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
</treatment>
|
||||
</document>
|
||||
169
data/03/C5/8D/03C58D12C81AFFA67DC8FA28FD2572D0.xml
Normal file
169
data/03/C5/8D/03C58D12C81AFFA67DC8FA28FD2572D0.xml
Normal file
|
|
@ -0,0 +1,169 @@
|
|||
<document id="FE45AAA00154A39C532A135DCA58563F" ID-DOI="10.12651/JSR.2020.9.1.035" ID-ISSN="2713-8615" ID-Zenodo-Dep="12753636" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="tatiana" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_approvedBy="tatiana" IM.taxonomicNames_approvedBy="tatiana" IM.treatments_approvedBy="tatiana" checkinTime="1721183779294" checkinUser="felipe" docAuthor="Kim, Pil Soo, Lee, Ki-Eun, Tak, Euon Jung & Bae, Myung-Suk Kang and Jin-Woo" docDate="2020" docId="03C58D12C81AFFA67DC8FA28FD2572D0" docLanguage="en" docName="JSpeciesRes.9.1.35-45.pdf" docOrigin="Journal of Species Research 9 (1)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Ochrobactrum pituitosum Huber et al. 2010" docType="treatment" docVersion="3" lastPageNumber="42" masterDocId="FFFCF56AC81CFFA17D66FD11FF8E7547" masterDocTitle="A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea" masterLastPageNumber="45" masterPageNumber="35" pageNumber="41" updateTime="1721635856593" updateUser="tatiana" zenodo-license-document="CC-BY-4.0">
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|
||||
<mods:titleInfo id="EFA64E4CFA2D848F30BD3F67C6AC0A62">
|
||||
<mods:title id="A5928D30DEE8136CB92584D10087D061">A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea</mods:title>
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</mods:titleInfo>
|
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<mods:name id="0CD299D6C5838EF4A810AEEDB60258E0" type="personal">
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<mods:roleTerm id="756989874E4D8F19BA399B2FBB66C58B">Author</mods:roleTerm>
|
||||
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|
||||
<mods:namePart id="4D1E099C649C34B39E6AC85429756F10">Kim, Pil Soo</mods:namePart>
|
||||
<mods:affiliation id="9177096AF9F7651C8CF56FDC7FF46683">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
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||||
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|
||||
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||||
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||||
<mods:roleTerm id="A7FFA7E0EB2A927EA08DC6183CB15CF3">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart id="2B665BE9924E61950FE6935570B33A7F">Lee, Ki-Eun</mods:namePart>
|
||||
<mods:affiliation id="C3FEA089D4BE6014A0FF0043E030214D">Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea</mods:affiliation>
|
||||
</mods:name>
|
||||
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|
||||
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|
||||
<mods:namePart id="BC7CCBDC2E364FB5D8A020F52268D985">Tak, Euon Jung</mods:namePart>
|
||||
<mods:affiliation id="8CF883F8D56D00FA3D0D0EFE085D818E">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
|
||||
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|
||||
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|
||||
</mods:role>
|
||||
<mods:namePart id="4D0B85BA2B45468F3D6FD8091F8E43F6">Bae, Myung-Suk Kang and Jin-Woo</mods:namePart>
|
||||
</mods:name>
|
||||
<mods:typeOfResource id="004A7982B5BF9B09A143B0DEB3778923">text</mods:typeOfResource>
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||||
<mods:title id="E1D1CB1007D549294D654E386A01B4F6">Journal of Species Research</mods:title>
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||||
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|
||||
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||||
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|
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<mods:number id="0C27BDBE9CEE162BADFE51FCF79EFB3A">9</mods:number>
|
||||
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|
||||
<mods:detail id="DE10E4F3B0899B62C0D9CD4744375DDE" type="issue">
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
<mods:classification id="715D75517AE071726FE6F962AA04796C">journal article</mods:classification>
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||||
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|
||||
<mods:identifier id="F76DD53E26D0E49B2CAB8B914289DD36" type="Zenodo-Dep">12753636</mods:identifier>
|
||||
</mods:mods>
|
||||
<treatment id="03C58D12C81AFFA67DC8FA28FD2572D0" LSID="urn:lsid:plazi:treatment:03C58D12C81AFFA67DC8FA28FD2572D0" httpUri="http://treatment.plazi.org/id/03C58D12C81AFFA67DC8FA28FD2572D0" lastPageId="7" lastPageNumber="42" pageId="6" pageNumber="41">
|
||||
<subSubSection id="C3766F8FC81AFFA67DC8FA28FDA07251" lastPageId="7" lastPageNumber="42" pageId="6" pageNumber="41" type="nomenclature">
|
||||
<paragraph id="8BD33C04C81AFFA77DC8FA28FD557216" blockId="6.[174,731,1848,1873]" box="[174,731,1848,1873]" pageId="6" pageNumber="41">
|
||||
<heading id="D09B8B68C81AFFA77DC8FA28FD557216" box="[174,731,1848,1873]" fontSize="10" level="2" pageId="6" pageNumber="41" reason="5">
|
||||
<emphasis id="B918E016C81AFFA77DC8FA28FD557216" bold="true" box="[174,731,1848,1873]" pageId="6" pageNumber="41">
|
||||
Description of
|
||||
<taxonomicName id="4C6C4787C81AFFA77C33FA29FDFC7216" ID-CoL="48DSF" authority="Huber et al., 2010" authorityName="Huber et al." authorityYear="2010" box="[341,626,1848,1873]" class="Alphaproteobacteria" family="Brucellaceae" genus="Ochrobactrum" kingdom="Bacteria" order="Rhizobiales" pageId="6" pageNumber="41" phylum="Proteobacteria" rank="species" species="pituitosum">
|
||||
<emphasis id="B918E016C81AFFA77C33FA29FDFC7216" bold="true" box="[341,626,1848,1873]" italics="true" pageId="6" pageNumber="41">Ochrobactrum pituitosum</emphasis>
|
||||
</taxonomicName>
|
||||
M3
|
||||
<collectionCode id="ED7DA4C1C81AFFA77FF9FA28FD3C7216" box="[671,690,1849,1873]" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="6" pageNumber="41">R</collectionCode>
|
||||
205
|
||||
</emphasis>
|
||||
</heading>
|
||||
</paragraph>
|
||||
<paragraph id="8BD33C04C81AFFA67DA3FA7BFDA07251" blockId="6.[174,779,1898,1987]" lastBlockId="7.[144,749,1209,1944]" lastPageId="7" lastPageNumber="42" pageId="6" pageNumber="41">
|
||||
Cells are Gram-staining positive. Colonies are circular, smooth, convex, and yellowish-white colored after 2 days of incubation on
|
||||
<collectionCode id="ED7DA4C1C81AFFA77CFDFABBFE227285" box="[411,428,1962,1986]" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="6" pageNumber="41">R</collectionCode>
|
||||
2A agar at 20℃. Dextrin,
|
||||
<emphasis id="B918E016C81AFFA77FA3FABAFD597285" box="[709,727,1963,1986]" italics="true" pageId="6" pageNumber="41">N</emphasis>
|
||||
-acetyl-D- glucosamine,
|
||||
<emphasis id="B918E016C81AFFA77978FBD8FBBE73A7" box="[1054,1072,1737,1760]" italics="true" pageId="6" pageNumber="41">N</emphasis>
|
||||
-acetyl-D- galactosamine,
|
||||
<emphasis id="B918E016C81AFFA77821FBD8FAD973A7" box="[1351,1367,1737,1760]" italics="true" pageId="6" pageNumber="41">α</emphasis>
|
||||
-D- glucose, D- mannose, D- fructose, D- galactose, L- rhamnose, inosine, 1% sodium lactate,
|
||||
<emphasis id="B918E016C81AFFA7791DFA18FB297267" box="[1147,1191,1801,1824]" italics="true" pageId="6" pageNumber="41">myo</emphasis>
|
||||
-inositol, rifamycin SV, L- alanine, L- histidine, guanidinium chloride, tetrazolium blue, methyl pyruvate, lithium chloride, acetoacetic acid, acetic acid, glycyl-L- proline, L- aspartic acid, L- glutamic acid,
|
||||
<subScript id="17E83E41C81AFFA77EE2FA81FC1872E5" attach="right" box="[900,918,1930,1954]" fontSize="7" pageId="6" pageNumber="41">L-</subScript>
|
||||
serine,
|
||||
<subScript id="17E83E41C81AFFA77E8FFA81FC7572E5" attach="right" box="[1001,1019,1930,1954]" fontSize="7" pageId="6" pageNumber="41">L-</subScript>
|
||||
lactic acid,
|
||||
<subScript id="17E83E41C81AFFA77918FA81FB1B72E6" attach="right" box="[1150,1173,1930,1953]" fontSize="7" pageId="6" pageNumber="41">D-</subScript>
|
||||
malic acid,
|
||||
<subScript id="17E83E41C81AFFA77871FA81FAA772E5" attach="right" box="[1303,1321,1930,1954]" fontSize="7" pageId="6" pageNumber="41">L-</subScript>
|
||||
malic acid, bromosuccinic acid, propionic acid, aztreonam, D- fucose, L- fucose, troleandomycin, lincomycin, D- galacturonic acid, L- galactonic acid lactone, D- glucuronic acid, vancomycin, tetrazolium violet, potassium tellurite,
|
||||
<subScript id="17E83E41C81BFFA67FE7F811FD187056" attach="right" box="[641,662,1274,1297]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
sorbitol, D- arabitol, niaproof 4, citric acid, and
|
||||
<emphasis id="B918E016C81BFFA67F5DF80AFDC47075" box="[571,586,1307,1330]" italics="true" pageId="7" pageNumber="42">γ</emphasis>
|
||||
-aminobutryric acid are utilized as the sole source of carbon. However, D- maltose, D- trehalose, D- cellobiose, gentiobiose, sucrose,
|
||||
<subScript id="17E83E41C81BFFA67DF6F890FF2970D5" attach="none" box="[144,167,1403,1426]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
turanose,
|
||||
<subScript id="17E83E41C81BFFA67C71F890FEA070D5" attach="right" box="[279,302,1403,1426]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
salicin, glycerol, pectin, nalidixic acid,
|
||||
<emphasis id="B918E016C81BFFA67DF6F88DFF2E70F4" box="[144,160,1436,1459]" italics="true" pageId="7" pageNumber="42">α</emphasis>
|
||||
-keto-butyric acid, sodium butyrate, D- mannitol, D- gluconic acid, 4-hydroxyphenylacetic acid, Tween 40,
|
||||
<emphasis id="B918E016C81BFFA67FD7F8ADFD4F7094" box="[689,705,1468,1491]" italics="true" pageId="7" pageNumber="42">α</emphasis>
|
||||
-hydroxybutyric acid, sodium bromate,
|
||||
<emphasis id="B918E016C81BFFA67F75F8CDFDAD70B4" box="[531,547,1500,1523]" italics="true" pageId="7" pageNumber="42">α</emphasis>
|
||||
-D- lactose,
|
||||
<emphasis id="B918E016C81BFFA67FFEF8CDFD2970B3" box="[664,679,1500,1524]" italics="true" pageId="7" pageNumber="42">β</emphasis>
|
||||
-
|
||||
<subScript id="17E83E41C81BFFA67FCBF8CDFF487354" attach="left" fontSize="7" pageId="7" pageNumber="42">methyl-D-</subScript>
|
||||
glucoside,
|
||||
<emphasis id="B918E016C81BFFA67C25F8ECFEDB7353" box="[323,341,1533,1556]" italics="true" pageId="7" pageNumber="42">N</emphasis>
|
||||
-acetyl-
|
||||
<emphasis id="B918E016C81BFFA67CCAF8EDFE357353" box="[428,443,1532,1556]" italics="true" pageId="7" pageNumber="42">β</emphasis>
|
||||
-
|
||||
<subScript id="17E83E41C81BFFA67CA3FB13FE527354" attach="none" box="[453,476,1532,1555]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
mannosamine, 3-methyl glucose, fusidic acid, D- serine, D- glucose-6-phosphate, D- fructose-6-phosphate, minocycline, glucuronamide, stachyose,
|
||||
<subScript id="17E83E41C81BFFA67C60FB72FE927333" attach="right" box="[262,284,1629,1652]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
raffinose,
|
||||
<subScript id="17E83E41C81BFFA67CE1FB72FE107333" attach="right" box="[391,414,1629,1652]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
melibiose,
|
||||
<emphasis id="B918E016C81BFFA67F75FB4CFDAB7333" box="[531,549,1629,1652]" italics="true" pageId="7" pageNumber="42">N</emphasis>
|
||||
-acetyl neuraminic acid, D- aspartic acid, D- serine, gelatin, L- arginine, L- pyroglutamic acid, mucic acid, quinic acid, D- saccharic acid, D- lactic acid methyl ester,
|
||||
<emphasis id="B918E016C81BFFA67CC3FBAFFE3B7392" box="[421,437,1726,1749]" italics="true" pageId="7" pageNumber="42">α</emphasis>
|
||||
-keto-glutaric acid,
|
||||
<emphasis id="B918E016C81BFFA67FE4FBAFFD1F7391" box="[642,657,1726,1750]" italics="true" pageId="7" pageNumber="42">β</emphasis>
|
||||
-
|
||||
<subScript id="17E83E41C81BFFA67FFEFBAFFF3773B3" attach="left" fontSize="7" pageId="7" pageNumber="42">hydroxyl-D</subScript>
|
||||
,
|
||||
<subScript id="17E83E41C81BFFA67DA1FBF5FF5773B1" attach="right" box="[199,217,1758,1782]" fontSize="7" pageId="7" pageNumber="42">L-</subScript>
|
||||
butyric acid, and formic acid are not utilized as the sole source of carbon (Biolog
|
||||
<collectionCode id="ED7DA4C1C81BFFA67CAEFBEFFE707251" box="[456,510,1790,1814]" pageId="7" pageNumber="42">GEN</collectionCode>
|
||||
<collectionCode id="ED7DA4C1C81BFFA67F62FBEFFDAC7251" box="[516,546,1790,1814]" pageId="7" pageNumber="42">III</collectionCode>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<caption id="DF136C8CC81BFFA67FDEF94CFCD17134" box="[696,863,1117,1139]" isContinuationCaption="true" pageId="7" pageNumber="42" startId="7.[696,729,1117,1139]" targetBox="[167,1393,258,1087]" targetPageId="7" targetType="figure">
|
||||
<paragraph id="8BD33C04C81BFFA67FDEF94CFCD17134" blockId="7.[696,863,1117,1139]" box="[696,863,1117,1139]" pageId="7" pageNumber="42">
|
||||
<emphasis id="B918E016C81BFFA67FDEF94CFD7A7135" bold="true" box="[696,756,1117,1139]" pageId="7" pageNumber="42">Fig. 2.</emphasis>
|
||||
Continued.
|
||||
</paragraph>
|
||||
</caption>
|
||||
<subSubSection id="C3766F8FC81BFFA67DC0FA0FFD2572D0" pageId="7" pageNumber="42" type="description">
|
||||
<paragraph id="8BD33C04C81BFFA67DC0FA0FFD2572D0" blockId="7.[144,749,1209,1944]" pageId="7" pageNumber="42">
|
||||
<materialsCitation id="3B043659C81BFFA67DC0FA0FFD1C72D0" collectionCode="R" collectorName="Strain M" country="South Korea" county="The" location="Siberian" municipality="Hwacheon" pageId="7" pageNumber="42" specimenCode="R205" specimenCount="1" stateProvince="Gangwon">
|
||||
<collectorName id="269959D2C81BFFA67DC0FA0FFE837271" box="[166,269,1822,1846]" pageId="7" pageNumber="42">Strain M</collectorName>
|
||||
3
|
||||
<specimenCode id="DBCA947FC81BFFA67C7FFA0FFED87271" box="[281,342,1822,1846]" collectionCode="R" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="7" pageNumber="42">R205</specimenCode>
|
||||
(= NIBRBAC000499689) was isolated from the feces of a
|
||||
<location id="8EB36ADFC81BFFA67CCFFA2EFD8D7210" LSID="urn:lsid:plazi:treatment:03C58D12C81AFFA67DC8FA28FD2572D0:8EB36ADFC81BFFA67CCFFA2EFD8D7210" box="[425,515,1855,1879]" country="South Korea" county="The" municipality="Hwacheon" name="Siberian" pageId="7" pageNumber="42" stateProvince="Gangwon">Siberian</location>
|
||||
musk deer (
|
||||
<taxonomicName id="4C6C4787C81BFFA67FEBFA2FFE807230" authorityName="Linnaeus" authorityYear="1758" class="Mammalia" family="Moschidae" genus="Moschus" kingdom="Animalia" order="Artiodactyla" pageId="7" pageNumber="42" phylum="Chordata" rank="species" species="moschiferus">
|
||||
<emphasis id="B918E016C81BFFA67FEBFA2FFE807230" italics="true" pageId="7" pageNumber="42">Moschus moschiferus</emphasis>
|
||||
</taxonomicName>
|
||||
),
|
||||
<collectingMunicipality id="6BB7A67EC81BFFA67C45FA4EFE187230" box="[291,406,1887,1911]" pageId="7" pageNumber="42">Hwacheon</collectingMunicipality>
|
||||
,
|
||||
<collectingRegion id="49A8F2E6C81BFFA67CC6FA4EFDE37230" box="[416,621,1887,1911]" country="South Korea" name="Gangwon" pageId="7" pageNumber="42">Gangwon Province</collectingRegion>
|
||||
,
|
||||
<collectingCountry id="F37B7C94C81BFFA67F11FA4EFD347231" box="[631,698,1887,1910]" name="South Korea" pageId="7" pageNumber="42">Korea</collectingCountry>
|
||||
.
|
||||
<collectingCounty id="62B24488C81BFFA67FA5FA4EFD627230" box="[707,748,1887,1911]" pageId="7" pageNumber="42">The</collectingCounty>
|
||||
DNA G + C content of the
|
||||
<typeStatus id="54D782A6C81BFFA67CCEFA91FE5B72DF" box="[424,469,1920,1944]" pageId="7" pageNumber="42">type</typeStatus>
|
||||
strain is 55.0 mol
|
||||
</materialsCitation>
|
||||
%.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
</treatment>
|
||||
</document>
|
||||
157
data/03/C5/8D/03C58D12C81BFFA97E4FF9A8FD477727.xml
Normal file
157
data/03/C5/8D/03C58D12C81BFFA97E4FF9A8FD477727.xml
Normal file
|
|
@ -0,0 +1,157 @@
|
|||
<document id="201FA62DDE29B4F9FDAD1F6C71BA97A5" ID-DOI="10.12651/JSR.2020.9.1.035" ID-ISSN="2713-8615" ID-Zenodo-Dep="12753636" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="tatiana" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_approvedBy="tatiana" IM.taxonomicNames_approvedBy="tatiana" IM.treatments_approvedBy="tatiana" checkinTime="1721183779294" checkinUser="felipe" docAuthor="Kim, Pil Soo, Lee, Ki-Eun, Tak, Euon Jung & Bae, Myung-Suk Kang and Jin-Woo" docDate="2020" docId="03C58D12C81BFFA97E4FF9A8FD477727" docLanguage="en" docName="JSpeciesRes.9.1.35-45.pdf" docOrigin="Journal of Species Research 9 (1)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Lysinibacillus mangiferihumi Yang et al. 2012" docType="treatment" docVersion="3" lastPageNumber="43" masterDocId="FFFCF56AC81CFFA17D66FD11FF8E7547" masterDocTitle="A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea" masterLastPageNumber="45" masterPageNumber="35" pageNumber="42" updateTime="1721635856593" updateUser="tatiana" zenodo-license-document="CC-BY-4.0">
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||||
<mods:mods id="1F91E13DB2A84FEBE30474BE4A973592" xmlns:mods="http://www.loc.gov/mods/v3">
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||||
<mods:titleInfo id="9E2084A73395DB81024D15B7ECB46A82">
|
||||
<mods:title id="6681A0BCF1A73DAF9D4A36DF2E1042A3">A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea</mods:title>
|
||||
</mods:titleInfo>
|
||||
<mods:name id="221530F80C634E57F08A887C3D3D570F" type="personal">
|
||||
<mods:role id="E95A6B9C522BFE943EA43B1225CB1BF2">
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<mods:roleTerm id="90663F17DD4EB3D68CCB9E0D1CEFA03F">Author</mods:roleTerm>
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||||
</mods:role>
|
||||
<mods:namePart id="89469B1F0C69C5EF6E21C1A6B16C3E5A">Kim, Pil Soo</mods:namePart>
|
||||
<mods:affiliation id="D7584B7A57D71185B08CF118911DA312">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
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||||
</mods:name>
|
||||
<mods:name id="18021AE5510C9A789B118EA6D590FECA" type="personal">
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<mods:role id="1652AC880C044C25B2D7D722B08D2AC8">
|
||||
<mods:roleTerm id="B86FFAE84E46FFB1A96856E6E08B0AE9">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart id="56EEB357220212A92BD666738C637A3F">Lee, Ki-Eun</mods:namePart>
|
||||
<mods:affiliation id="B768B539D75502B1C7BFD92004C89F62">Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea</mods:affiliation>
|
||||
</mods:name>
|
||||
<mods:name id="F4E5D4B110C5B512007B249871479B69" type="personal">
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<mods:role id="99FEA08533744B51FBDBAC0D9DEB24D3">
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||||
</mods:role>
|
||||
<mods:namePart id="5DF74858D94E12B932DC0A85359E245C">Tak, Euon Jung</mods:namePart>
|
||||
<mods:affiliation id="B19C447678ACB73DB6D4AA478A9AEDED">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
|
||||
</mods:name>
|
||||
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|
||||
</mods:role>
|
||||
<mods:namePart id="67468AB3DE4D3961D486842DC7D3EEE5">Bae, Myung-Suk Kang and Jin-Woo</mods:namePart>
|
||||
</mods:name>
|
||||
<mods:typeOfResource id="8F0CDAE01FB455DF8575607E98010C6A">text</mods:typeOfResource>
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<mods:title id="0FE38612B81E5F79E33ADF649F1AEAE6">Journal of Species Research</mods:title>
|
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|
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|
||||
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|
||||
<mods:number id="C37903DEA3E4E2DF0A17740F897A26C9">9</mods:number>
|
||||
</mods:detail>
|
||||
<mods:detail id="6BC61B4F3B973DCC850F1EFB431D0DDC" type="issue">
|
||||
<mods:number id="7C2854FEB0A07231938E85F46A0BB2D8">1</mods:number>
|
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|
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|
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
<mods:classification id="B5BC60CD52F2486D2CB5E046F0521C36">journal article</mods:classification>
|
||||
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||||
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|
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<treatment id="03C58D12C81BFFA97E4FF9A8FD477727" LSID="urn:lsid:plazi:treatment:03C58D12C81BFFA97E4FF9A8FD477727" httpUri="http://treatment.plazi.org/id/03C58D12C81BFFA97E4FF9A8FD477727" lastPageId="8" lastPageNumber="43" pageId="7" pageNumber="42">
|
||||
<subSubSection id="C3766F8FC81BFFA97E4FF9A8FE3B7498" lastPageId="8" lastPageNumber="43" pageId="7" pageNumber="42" type="nomenclature">
|
||||
<paragraph id="8BD33C04C81BFFA67E4FF9A8FAF37196" blockId="7.[809,1405,1209,1233]" box="[809,1405,1209,1233]" pageId="7" pageNumber="42">
|
||||
<heading id="D09B8B68C81BFFA67E4FF9A8FAF37196" box="[809,1405,1209,1233]" centered="true" fontSize="10" level="2" pageId="7" pageNumber="42" reason="5">
|
||||
<emphasis id="B918E016C81BFFA67E4FF9A8FAF37196" bold="true" box="[809,1405,1209,1233]" pageId="7" pageNumber="42">
|
||||
Description of
|
||||
<taxonomicName id="4C6C4787C81BFFA67EB6F9A8FA987196" authority="Yang et al., 2012" authorityName="Yang et al." authorityYear="2012" box="[976,1302,1209,1233]" class="Bacilli" family="Bacillaceae" genus="Lysinibacillus" kingdom="Bacteria" order="Bacillales" pageId="7" pageNumber="42" phylum="Firmicutes" rank="species" species="mangiferihumi">
|
||||
<emphasis id="B918E016C81BFFA67EB6F9A8FA987196" bold="true" box="[976,1302,1209,1233]" italics="true" pageId="7" pageNumber="42">Lysinibacillus mangiferihumi</emphasis>
|
||||
</taxonomicName>
|
||||
M1
|
||||
<collectionCode id="ED7DA4C1C81BFFA67824F9A8FADD7196" box="[1346,1363,1209,1233]" name="Tavera, Department of Geology and Geophysics" pageId="7" pageNumber="42">T</collectionCode>
|
||||
305
|
||||
</emphasis>
|
||||
</heading>
|
||||
</paragraph>
|
||||
<paragraph id="8BD33C04C81BFFA97E59F9FBFE3B7498" blockId="7.[809,1414,1258,1992]" lastBlockId="8.[174,779,261,608]" lastPageId="8" lastPageNumber="43" pageId="7" pageNumber="42">
|
||||
Cells are Gram-staining positive. Colonies are circular, smooth, convex, and yellowish-white colored after 2 days of incubation on
|
||||
<collectionCode id="ED7DA4C1C81BFFA67970F83AFBA97004" box="[1046,1063,1323,1347]" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="7" pageNumber="42">R</collectionCode>
|
||||
2A agar at 37℃. Dextrin,
|
||||
<emphasis id="B918E016C81BFFA67826F83DFADC7004" box="[1344,1362,1324,1347]" italics="true" pageId="7" pageNumber="42">N</emphasis>
|
||||
-acetyl-D- glucosamine,
|
||||
<emphasis id="B918E016C81BFFA67E91F85DFB877024" box="[1015,1033,1356,1379]" italics="true" pageId="7" pageNumber="42">N</emphasis>
|
||||
-acetyl-D- galactosamine, D- fructose, D- galactose, L- rhamnose, inosine, 1% sodium lactate,
|
||||
<emphasis id="B918E016C81BFFA67E4FF89DFCDB70E4" box="[809,853,1420,1443]" italics="true" pageId="7" pageNumber="42">myo</emphasis>
|
||||
-inositol, L- alanine, L- histidine, methyl pyruvate, lithium chloride, acetoacetic acid, acetic acid,
|
||||
<subScript id="17E83E41C81BFFA6799CF8BDFAD67084" attach="left" box="[1274,1368,1452,1476]" fontSize="7" pageId="7" pageNumber="42">glycyl-L-</subScript>
|
||||
proline, L- aspartic acid, L- glutamic acid, L- serine, L- lactic acid, D- malic acid, L- malic acid, bromosuccinic acid, propionic acid, aztreonam,
|
||||
<subScript id="17E83E41C81BFFA67945FB02FBB77363" attach="right" box="[1059,1081,1549,1572]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
fucose,
|
||||
<subScript id="17E83E41C81BFFA679ECFB02FB127362" attach="right" box="[1162,1180,1549,1573]" fontSize="7" pageId="7" pageNumber="42">L-</subScript>
|
||||
fucose,
|
||||
<subScript id="17E83E41C81BFFA67989FB02FA8B7363" attach="right" box="[1263,1285,1549,1572]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
galacturonic acid, L- galactonic acid lactone, D- glucuronic acid, potassium tellurite, D- arabitol, citric acid,
|
||||
<emphasis id="B918E016C81BFFA679C6FB5FFB217322" box="[1184,1199,1614,1637]" italics="true" pageId="7" pageNumber="42">γ</emphasis>
|
||||
-aminobutryric acid, D- trehalose, D- cellobiose, gentiobiose, sucrose, D- turanose,
|
||||
<subScript id="17E83E41C81BFFA67E4FFB85FCB173E2" attach="none" box="[809,831,1678,1701]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
salicin, glycerol,
|
||||
<emphasis id="B918E016C81BFFA67E91FB9FFB8973E2" box="[1015,1031,1678,1701]" italics="true" pageId="7" pageNumber="42">α</emphasis>
|
||||
-keto-butyric acid, sodium butyrate, D- mannitol, D- gluconic acid, Tween 40,
|
||||
<emphasis id="B918E016C81BFFA679AAFBBEFB527381" box="[1228,1244,1711,1734]" italics="true" pageId="7" pageNumber="42">α</emphasis>
|
||||
-hydroxybutyric acid,
|
||||
<emphasis id="B918E016C81BFFA67E03FBDFFCFA73A1" box="[869,884,1742,1766]" italics="true" pageId="7" pageNumber="42">β</emphasis>
|
||||
-methyl-D- glucoside,
|
||||
<emphasis id="B918E016C81BFFA6793CFBDEFBE273A1" box="[1114,1132,1743,1766]" italics="true" pageId="7" pageNumber="42">N</emphasis>
|
||||
-acetyl-
|
||||
<emphasis id="B918E016C81BFFA679DBFBDFFB4273A1" box="[1213,1228,1742,1766]" italics="true" pageId="7" pageNumber="42">β</emphasis>
|
||||
-D- mannosamine, 3-methyl glucose, D- serine, D- glucose-6-phosphate,
|
||||
<subScript id="17E83E41C81BFFA67E4FFA04FCB17261" attach="none" box="[809,831,1807,1830]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
fructose-6-phosphate, glucuronamide, stachyose,
|
||||
<subScript id="17E83E41C81BFFA67826FA04FAD87261" attach="right" box="[1344,1366,1807,1830]" fontSize="7" pageId="7" pageNumber="42">D-</subScript>
|
||||
melibiose,
|
||||
<emphasis id="B918E016C81BFFA67E1EFA21FC047200" box="[888,906,1840,1863]" italics="true" pageId="7" pageNumber="42">N</emphasis>
|
||||
-acetyl neuraminic acid, D- aspartic acid, D- serine, gelatin, L- arginine, L- pyroglutamic acid, mucic acid, quinic acid, D- saccharic acid, D- lactic acid methyl ester,
|
||||
<emphasis id="B918E016C81BFFA67E4FFA80FCB772EF" box="[809,825,1937,1960]" italics="true" pageId="7" pageNumber="42">α</emphasis>
|
||||
-keto-glutaric acid,
|
||||
<emphasis id="B918E016C81BFFA67963FA81FB9A72EF" box="[1029,1044,1936,1960]" italics="true" pageId="7" pageNumber="42">β</emphasis>
|
||||
-
|
||||
<subScript id="17E83E41C81BFFA6797DFA81FB0772E1" attach="left" box="[1051,1161,1936,1960]" fontSize="7" pageId="7" pageNumber="42">hydroxy-D</subScript>
|
||||
,
|
||||
<subScript id="17E83E41C81BFFA679F0FA87FB2672EF" attach="right" box="[1174,1192,1936,1960]" fontSize="7" pageId="7" pageNumber="42">L-</subScript>
|
||||
butyric acid, and formic acid are utilized as the sole source of carbon. However,
|
||||
<emphasis id="B918E016C814FFA97DB7FC17FF6F745A" box="[209,225,262,285]" italics="true" pageId="8" pageNumber="43">α</emphasis>
|
||||
-D- glucose, D- mannose, rifamycin SV, guanidinium chloride, tetrazolium blue, troleandomycin, lincomycin, vancomycin, tetrazolium violet, D- sorbitol, niaproof 4,
|
||||
<subScript id="17E83E41C814FFA97DC8FC7DFF4A743A" attach="none" box="[174,196,358,381]" fontSize="7" pageId="8" pageNumber="43">D-</subScript>
|
||||
maltose, pectin, nalidixic acid, 4-hydroxyphenylacetic acid, sodium bromate,
|
||||
<emphasis id="B918E016C814FFA97CC5FC96FE3D74D9" box="[419,435,391,414]" italics="true" pageId="8" pageNumber="43">α</emphasis>
|
||||
-D- lactose, fusidic acid, minocycline, and D- raffinose are not utilized as the sole source of carbon (Biolog
|
||||
<collectionCode id="ED7DA4C1C814FFA97C29FCD6FE0B7498" box="[335,389,455,479]" pageId="8" pageNumber="43">GEN</collectionCode>
|
||||
<collectionCode id="ED7DA4C1C814FFA97CEDFCD6FE277498" box="[395,425,455,479]" pageId="8" pageNumber="43">III</collectionCode>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="C3766F8FC814FFA97DA3FCF6FD477727" pageId="8" pageNumber="43" type="description">
|
||||
<paragraph id="8BD33C04C814FFA97DA3FCF6FD477727" blockId="8.[174,779,261,608]" pageId="8" pageNumber="43">
|
||||
<materialsCitation id="3B043659C814FFA97DA3FCF6FD3E7727" collectionCode="T" collectorName="Strain M" country="South Korea" county="The" location="Siberian" municipality="Hwacheon" pageId="8" pageNumber="43" specimenCode="T305" specimenCount="1" stateProvince="Gangwon">
|
||||
<collectorName id="269959D2C814FFA97DA3FCF6FEA374B8" box="[197,301,487,511]" pageId="8" pageNumber="43">Strain M</collectorName>
|
||||
1
|
||||
<specimenCode id="DBCA947FC814FFA97C50FCF6FEFA74B8" box="[310,372,487,511]" collectionCode="T" name="Tavera, Department of Geology and Geophysics" pageId="8" pageNumber="43">T305</specimenCode>
|
||||
(= NIBRBAC000499685) was isolated from the feces of a
|
||||
<location id="8EB36ADFC814FFA97CAEFF16FDAC7758" LSID="urn:lsid:plazi:treatment:03C58D12C81BFFA97E4FF9A8FD477727:8EB36ADFC814FFA97CAEFF16FDAC7758" box="[456,546,519,543]" country="South Korea" county="The" municipality="Hwacheon" name="Siberian" pageId="8" pageNumber="43" stateProvince="Gangwon">Siberian</location>
|
||||
musk deer (
|
||||
<taxonomicName id="4C6C4787C814FFA97FCDFF16FEA27778" authorityName="Linnaeus" authorityYear="1758" class="Mammalia" family="Moschidae" genus="Moschus" kingdom="Animalia" order="Artiodactyla" pageId="8" pageNumber="43" phylum="Chordata" rank="species" species="moschiferus">
|
||||
<emphasis id="B918E016C814FFA97FCDFF16FEA27778" italics="true" pageId="8" pageNumber="43">Moschus moschiferus</emphasis>
|
||||
</taxonomicName>
|
||||
),
|
||||
<collectingMunicipality id="6BB7A67EC814FFA97C24FF36FE3B7778" box="[322,437,551,575]" pageId="8" pageNumber="43">Hwacheon</collectingMunicipality>
|
||||
,
|
||||
<collectingRegion id="49A8F2E6C814FFA97CD9FF39FD057778" box="[447,651,551,576]" country="South Korea" name="Gangwon" pageId="8" pageNumber="43">Gangwon Province</collectingRegion>
|
||||
,
|
||||
<collectingCountry id="F37B7C94C814FFA97FF3FF39FD567778" box="[661,728,552,575]" name="South Korea" pageId="8" pageNumber="43">Korea</collectingCountry>
|
||||
.
|
||||
<collectingCounty id="62B24488C814FFA97F84FF36FC857778" box="[738,779,551,575]" pageId="8" pageNumber="43">The</collectingCounty>
|
||||
DNA G + C content of the
|
||||
<typeStatus id="54D782A6C814FFA97CA0FF59FE7D7727" box="[454,499,584,608]" pageId="8" pageNumber="43">type</typeStatus>
|
||||
strain is 35.9 mol
|
||||
</materialsCitation>
|
||||
%.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
</treatment>
|
||||
</document>
|
||||
|
|
@ -1,58 +1,58 @@
|
|||
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||||
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|
||||
<mods:namePart id="8E8E19E0C335B612649489A28C0BE82F">Kim, Pil Soo</mods:namePart>
|
||||
<mods:affiliation id="7E282B89AEB4DD222F6B818D5637D151">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
|
||||
<mods:namePart id="C199E4BF12BC7670BAADBD1B8C12003D">Kim, Pil Soo</mods:namePart>
|
||||
<mods:affiliation id="E7404AD1940464DB11DD23490256F18C">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
|
||||
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|
||||
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||||
<mods:namePart id="9DCC19898D0D9D0C45D235446031C086">Lee, Ki-Eun</mods:namePart>
|
||||
<mods:affiliation id="22A827BE0DCFF8F61F7310D1100854A9">Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea</mods:affiliation>
|
||||
<mods:namePart id="106681C2C33E239260CF7106A65D075A">Lee, Ki-Eun</mods:namePart>
|
||||
<mods:affiliation id="EA9F7F66D1719FB7ECDBEF2FBAD6F84B">Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea</mods:affiliation>
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||||
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|
||||
<mods:namePart id="8820B02918D6A7903388C8CC33FD5D6A">Tak, Euon Jung</mods:namePart>
|
||||
<mods:affiliation id="011FFA6EC8EC52D87682B47733F2CC04">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
|
||||
<mods:namePart id="8F960CC6B99A8D7B40B87B5D827831CD">Tak, Euon Jung</mods:namePart>
|
||||
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|
||||
</mods:role>
|
||||
<mods:namePart id="50A136BC23E220896F02C44337796868">Bae, Myung-Suk Kang and Jin-Woo</mods:namePart>
|
||||
<mods:namePart id="E7D61AE1A843E7A2716B444C83C0D774">Bae, Myung-Suk Kang and Jin-Woo</mods:namePart>
|
||||
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<mods:title id="35362277A4468D9B5559A8340C5261A7">Journal of Species Research</mods:title>
|
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<mods:date id="60319D04FD8AF0E8DDA15B8591EC50D7">2020</mods:date>
|
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<mods:detail id="F3A5FF69D38C7E78789357FB95E415DB" type="volume">
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<mods:number id="7013968DACE737D3138D7F6075CD8BF4">9</mods:number>
|
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<mods:date id="50775540A12CDA811CFEE89CB00A2024">2020</mods:date>
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<mods:identifier id="7091EEC01151B08240980206820BC383" type="ISSN">2713-8615</mods:identifier>
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|
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<treatment id="03C58D12C81DFFA27E4FFA32FD837356" ID-DOI="http://doi.org/10.5281/zenodo.12753709" ID-Zenodo-Dep="12753709" LSID="urn:lsid:plazi:treatment:03C58D12C81DFFA27E4FFA32FD837356" httpUri="http://treatment.plazi.org/id/03C58D12C81DFFA27E4FFA32FD837356" lastPageId="3" lastPageNumber="38" pageId="1" pageNumber="36">
|
||||
<subSubSection id="C3766F8FC81DFFA27E4FFA32FECC70F6" lastPageId="3" lastPageNumber="38" pageId="1" pageNumber="36" type="nomenclature">
|
||||
|
|
@ -60,11 +60,10 @@
|
|||
<heading id="D09B8B68C81DFFA07E4FFA32FACC727C" box="[809,1346,1826,1851]" fontSize="10" level="2" pageId="1" pageNumber="36" reason="5">
|
||||
<emphasis id="B918E016C81DFFA07E4FFA32FACC727C" bold="true" box="[809,1346,1826,1851]" pageId="1" pageNumber="36">
|
||||
Description of
|
||||
<taxonomicName id="4C6C4787C81DFFA07EB6FA32FAAC727C" ID-CoL="39Y2X" authority="AE" authorityName="AE" box="[976,1314,1826,1851]" class="Bacilli" family="Enterococcaceae" genus="Enterococcus" kingdom="Bacteria" order="Lactobacillales" pageId="1" pageNumber="36" phylum="Firmicutes" rank="species" species="thailandicus">
|
||||
<taxonomicName id="4C6C4787C81DFFA07EB6FA32FB7B727D" ID-CoL="39Y2X" authority="Tanasupawat et al., 2008" authorityName="Tanasupawat et al." authorityYear="2008" box="[976,1269,1826,1850]" class="Bacilli" family="Enterococcaceae" genus="Enterococcus" kingdom="Bacteria" order="Lactobacillales" pageId="1" pageNumber="36" phylum="Firmicutes" rank="species" species="thailandicus">
|
||||
<emphasis id="B918E016C81DFFA07EB6FA32FB7B727D" bold="true" box="[976,1269,1826,1850]" italics="true" pageId="1" pageNumber="36">Enterococcus thailandicus</emphasis>
|
||||
AE
|
||||
</taxonomicName>
|
||||
4-1
|
||||
AE4-1
|
||||
</emphasis>
|
||||
</heading>
|
||||
</paragraph>
|
||||
|
|
@ -88,7 +87,7 @@ arabinose, propionate, caprate, valerate, citrate, 2-ketogluconate, 3-hydroxy-bu
|
|||
-acetyl-glucosamine, inositol, D- maltose, itaconate, suberate, malonate, D, L- lactate, L- alanine, 5-ketogluconate, glycogen, 3-hydroxy-benzoate, and L- serine.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<caption id="DF136C8CC81EFFA37DE9FF77FAF37738" box="[143,1405,614,639]" pageId="2" pageNumber="37" startId="2.[143,196,614,639]" targetType="table">
|
||||
<caption id="DF136C8CC81EFFA37DE9FF77FAF37738" box="[143,1405,614,639]" pageId="2" pageNumber="37" startId="2.[143,196,614,639]" targetBox="[143,1881,667,1639]" targetIsTable="true" targetPageId="2" targetType="table">
|
||||
<paragraph id="8BD33C04C81EFFA37DE9FF77FAF37738" blockId="2.[143,1405,614,639]" box="[143,1405,614,639]" pageId="2" pageNumber="37">
|
||||
<emphasis id="B918E016C81EFFA37DE9FF77FF557738" bold="true" box="[143,219,614,639]" pageId="2" pageNumber="37">Table 1.</emphasis>
|
||||
Summary of the isolated strains from the gastrointestinal tract of the endangered species in Korea and their taxonomic affiliations.
|
||||
|
|
|
|||
108
data/03/C5/8D/03C58D12C81FFFA27DF6FB2BFACD7048.xml
Normal file
108
data/03/C5/8D/03C58D12C81FFFA27DF6FB2BFACD7048.xml
Normal file
|
|
@ -0,0 +1,108 @@
|
|||
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|
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<mods:titleInfo id="ADEE3BEAD3A81411E684E3D486344AD9">
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<mods:title id="F87A0017C4B81C0E98FE64371376D9FB">A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea</mods:title>
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|
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<mods:name id="9E84F7B76C5FDE2ADB21CBE6E691E72A" type="personal">
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<mods:namePart id="00EA72226C5BEFBAFFDEC80AFF9BC145">Kim, Pil Soo</mods:namePart>
|
||||
<mods:affiliation id="A945EFF8EBACA364222F5C3FB3B91840">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
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|
||||
<mods:namePart id="500A1F79B667D3CF1A01A2701FE29ADB">Lee, Ki-Eun</mods:namePart>
|
||||
<mods:affiliation id="194B136D1795ECEDF6464FEAB73EA759">Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea</mods:affiliation>
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|
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<mods:namePart id="DDADA43308CBF196DD97755B74546FEA">Tak, Euon Jung</mods:namePart>
|
||||
<mods:affiliation id="C1C2A077DFEB09B9CA2CCF13B90D63FA">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
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|
||||
<mods:namePart id="B1779CBC6D3AD0A346179B393BB816A3">Bae, Myung-Suk Kang and Jin-Woo</mods:namePart>
|
||||
</mods:name>
|
||||
<mods:typeOfResource id="2368E5C1F824691BA960CC10CB7F3DBD">text</mods:typeOfResource>
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<mods:title id="5D4357D5208E9CBC31B78465988F65EE">Journal of Species Research</mods:title>
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<treatment id="03C58D12C81FFFA27DF6FB2BFACD7048" LSID="urn:lsid:plazi:treatment:03C58D12C81FFFA27DF6FB2BFACD7048" httpUri="http://treatment.plazi.org/id/03C58D12C81FFFA27DF6FB2BFACD7048" lastPageNumber="38" pageId="3" pageNumber="38">
|
||||
<subSubSection id="C3766F8FC81FFFA27DF6FB2BFC5771E8" pageId="3" pageNumber="38" type="nomenclature">
|
||||
<paragraph id="8BD33C04C81FFFA27DF6FB2BFDA97314" blockId="3.[144,551,1594,1619]" box="[144,551,1594,1619]" pageId="3" pageNumber="38">
|
||||
<heading id="D09B8B68C81FFFA27DF6FB2BFDA97314" box="[144,551,1594,1619]" fontSize="10" level="2" pageId="3" pageNumber="38" reason="5">
|
||||
<emphasis id="B918E016C81FFFA27DF6FB2BFDA97314" bold="true" box="[144,551,1594,1619]" pageId="3" pageNumber="38">
|
||||
Description of
|
||||
<taxonomicName id="4C6C4787C81FFFA27C51FB2AFD8C7315" ID-CoL="7F9T8" authority="Hoyles et al., 2000" authorityName="Hoyles et al." authorityYear="2000" box="[311,514,1594,1618]" class="Bacilli" family="Enterococcaceae" genus="Vagococcus" kingdom="Bacteria" order="Lactobacillales" pageId="3" pageNumber="38" phylum="Firmicutes" rank="species" species="fessus">
|
||||
<emphasis id="B918E016C81FFFA27C51FB2AFD8C7315" bold="true" box="[311,514,1594,1618]" italics="true" pageId="3" pageNumber="38">Vagococcus fessus</emphasis>
|
||||
</taxonomicName>
|
||||
B3
|
||||
</emphasis>
|
||||
</heading>
|
||||
</paragraph>
|
||||
<paragraph id="8BD33C04C81FFFA27DC0FB7DFC5771E8" blockId="3.[144,749,1644,1990]" lastBlockId="3.[809,1414,1014,1296]" pageId="3" pageNumber="38">
|
||||
Cells are Gram-staining positive, non-flagellated, and coccus. Colonies are circular, raised, entire, and white colored after 2 days of incubation on MRS agar at 30℃. Positive for nitrate reduction,
|
||||
<emphasis id="B918E016C81FFFA27CBFFBDDFE6673A3" box="[473,488,1740,1764]" italics="true" pageId="3" pageNumber="38">β</emphasis>
|
||||
-glucosidase, D- glucose, L- arabinose, D- mannose,
|
||||
<emphasis id="B918E016C81FFFA27CC7FBFCFE3D7243" box="[417,435,1773,1796]" italics="true" pageId="3" pageNumber="38">N</emphasis>
|
||||
-acetyl-glucosamine, D- maltose, gluconate, malate, and citrate in
|
||||
<collectionCode id="ED7DA4C1C81FFFA27F27FA1CFDE37262" box="[577,621,1805,1829]" pageId="3" pageNumber="38">API</collectionCode>
|
||||
20NE, but negative for indole production, glucose acidification, arginine dihydrolase, urease, protease,
|
||||
<emphasis id="B918E016C81FFFA27F5BFA5FFDC27221" box="[573,588,1870,1894]" italics="true" pageId="3" pageNumber="38">β</emphasis>
|
||||
-galactosidase, D- mannitol, caprate, adipate, phenyl-acetate. D- glucose, salicin,
|
||||
<subScript id="17E83E41C81FFFA27D87FA85FF7972E2" attach="right" box="[225,247,1934,1957]" fontSize="7" pageId="3" pageNumber="38">D-</subScript>
|
||||
melibiose,
|
||||
<subScript id="17E83E41C81FFFA27C0CFA85FEF272E1" attach="right" box="[362,380,1934,1958]" fontSize="7" pageId="3" pageNumber="38">L-</subScript>
|
||||
arabinose, citrate, 2-ketogluconate, 3-hydroxy-butyrate, L- proline, L- rhamnose,
|
||||
<emphasis id="B918E016C81FFFA27F07FABEFDFD7281" box="[609,627,1967,1990]" italics="true" pageId="3" pageNumber="38">N</emphasis>
|
||||
-acetyl-glucosamine, inositol, D- maltose, itaconate, and suberate are utilized. Does not utilize
|
||||
<subScript id="17E83E41C81FFFA27952F90DFBC4716A" attach="right" box="[1076,1098,1046,1069]" fontSize="7" pageId="3" pageNumber="38">D-</subScript>
|
||||
mannitol,
|
||||
<subScript id="17E83E41C81FFFA279D2F90DFB487169" attach="right" box="[1204,1222,1046,1070]" fontSize="7" pageId="3" pageNumber="38">L-</subScript>
|
||||
fucose,
|
||||
<subScript id="17E83E41C81FFFA2787CF90DFABE716A" attach="right" box="[1306,1328,1046,1069]" fontSize="7" pageId="3" pageNumber="38">D-</subScript>
|
||||
sorbitol, propionate, caprate, valerate, L- histidine, 4-hydroxy-benzoate, D- ribose, D- sucrose, malonate, acetate, D, L- lactate, L- alanine, 5-ketogluconate, glycogen, 3-hydroxy-benzoate, and L- serine.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="C3766F8FC81FFFA27E59F9A6FACD7048" pageId="3" pageNumber="38" type="description">
|
||||
<paragraph id="8BD33C04C81FFFA27E59F9A6FACD7048" blockId="3.[809,1414,1014,1296]" pageId="3" pageNumber="38">
|
||||
Strain B3 (= NIBRBAC000503068) was isolated from the intestinal tract of a finless porpoise (
|
||||
<taxonomicName id="4C6C4787C81FFFA27996F9C6FC367057" baseAuthorityName="G. Cuvier" baseAuthorityYear="1829" class="Mammalia" family="Phocoenidae" genus="Neophocaena" kingdom="Animalia" order="Cetacea" pageId="3" pageNumber="38" phylum="Chordata" rank="species" species="phocaenoides">
|
||||
<emphasis id="B918E016C81FFFA27996F9C6FC367057" italics="true" pageId="3" pageNumber="38">Neophocaena phocaenoides</emphasis>
|
||||
</taxonomicName>
|
||||
),
|
||||
<collectingRegion id="49A8F2E6C81FFFA27EA8F9E9FB7C7057" box="[974,1266,1272,1296]" country="South Korea" name="Chungnam" pageId="3" pageNumber="38">Chungcheongnam Province</collectingRegion>
|
||||
,
|
||||
<collectingCountry id="F37B7C94C81FFFA2799AF9E9FAB17048" box="[1276,1343,1272,1295]" name="South Korea" pageId="3" pageNumber="38">Korea</collectingCountry>
|
||||
.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
</treatment>
|
||||
</document>
|
||||
108
data/03/C5/8D/03C58D12C81FFFA47E4FF829FD2470CA.xml
Normal file
108
data/03/C5/8D/03C58D12C81FFFA47E4FF829FD2470CA.xml
Normal file
|
|
@ -0,0 +1,108 @@
|
|||
<document id="ADB26CA599A6788A5477DB643A5910FE" ID-DOI="10.12651/JSR.2020.9.1.035" ID-ISSN="2713-8615" ID-Zenodo-Dep="12753636" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="tatiana" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_approvedBy="tatiana" IM.taxonomicNames_approvedBy="tatiana" IM.treatments_approvedBy="tatiana" checkinTime="1721183779294" checkinUser="felipe" docAuthor="Kim, Pil Soo, Lee, Ki-Eun, Tak, Euon Jung & Bae, Myung-Suk Kang and Jin-Woo" docDate="2020" docId="03C58D12C81FFFA47E4FF829FD2470CA" docLanguage="en" docName="JSpeciesRes.9.1.35-45.pdf" docOrigin="Journal of Species Research 9 (1)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Lactobacillus sakei subsp. carnosus Torriani et al. 1996" docType="treatment" docVersion="3" lastPageNumber="38" masterDocId="FFFCF56AC81CFFA17D66FD11FF8E7547" masterDocTitle="A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea" masterLastPageNumber="45" masterPageNumber="35" pageNumber="38" updateTime="1721635856593" updateUser="tatiana" zenodo-license-document="CC-BY-4.0">
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<mods:title id="5F21A0C172594B63D2243F651216CEBE">A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea</mods:title>
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<mods:namePart id="0E09F125405583E6BF34356206CA9258">Kim, Pil Soo</mods:namePart>
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<mods:affiliation id="F64C63797411B86293A78E3091C56187">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
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<mods:namePart id="B3B7A95E50C5CC16E542321B98C5BC9C">Lee, Ki-Eun</mods:namePart>
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<mods:affiliation id="F9A01B7E7B8FE75D79A0A929076CCA18">Microorganism Resources Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea</mods:affiliation>
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<mods:namePart id="A486F0FAF440AA8E666D8F570FFF84ED">Tak, Euon Jung</mods:namePart>
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<mods:affiliation id="F0ADFD9CDCD63D15604245215B4D821B">Department of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, Republic of Korea</mods:affiliation>
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<mods:namePart id="0406966D4FEC469267D2E8DE8D6ADBDD">Bae, Myung-Suk Kang and Jin-Woo</mods:namePart>
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<mods:title id="678D528802E7D04B3679D4A1BF922D3E">Journal of Species Research</mods:title>
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<mods:date id="CAE6168A873B0D4DE1BAC5DB9D294B1C">2020</mods:date>
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<mods:number id="01AA26661EE52C6FC25556D211A59ADD">9</mods:number>
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<treatment id="03C58D12C81FFFA47E4FF829FD2470CA" LSID="urn:lsid:plazi:treatment:03C58D12C81FFFA47E4FF829FD2470CA" httpUri="http://treatment.plazi.org/id/03C58D12C81FFFA47E4FF829FD2470CA" lastPageId="5" lastPageNumber="38" pageId="3" pageNumber="38">
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<subSubSection id="C3766F8FC81FFFA27E4FF829FB0372C1" pageId="3" pageNumber="38" type="nomenclature">
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<paragraph id="8BD33C04C81FFFA27E4FF829FAF57017" blockId="3.[809,1403,1336,1361]" box="[809,1403,1336,1361]" pageId="3" pageNumber="38">
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<heading id="D09B8B68C81FFFA27E4FF829FAF57017" box="[809,1403,1336,1361]" centered="true" fontSize="10" level="2" pageId="3" pageNumber="38" reason="5">
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<emphasis id="B918E016C81FFFA27E4FF829FAF57017" bold="true" box="[809,1403,1336,1361]" pageId="3" pageNumber="38">
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Description of
|
||||
<taxonomicName id="4C6C4787C81FFFA27EAAF829FAC07017" ID-CoL="5J8DC" authority="Torriani et al., 1996" authorityName="Torriani et al." authorityYear="1996" box="[972,1358,1336,1361]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="3" pageNumber="38" phylum="Firmicutes" rank="subSpecies" species="sakei" subSpecies="carnosus">
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<emphasis id="B918E016C81FFFA27EAAF829FB147017" bold="true" box="[972,1178,1336,1360]" italics="true" pageId="3" pageNumber="38">Lactobacillus sakei</emphasis>
|
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subsp.
|
||||
<emphasis id="B918E016C81FFFA2798BF828FAC07017" bold="true" box="[1261,1358,1337,1360]" italics="true" pageId="3" pageNumber="38">carnosus</emphasis>
|
||||
</taxonomicName>
|
||||
M3
|
||||
</emphasis>
|
||||
</heading>
|
||||
</paragraph>
|
||||
<paragraph id="8BD33C04C81FFFA27E26F878FB0372C1" blockId="3.[809,1415,1385,1990]" pageId="3" pageNumber="38">
|
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Cells are Gram-staining positive, non-flagellated, and rod. Colonies are circular, raised, entire, and white colored after 2 days of incubation on MRS agar at 30℃. Positive for
|
||||
<emphasis id="B918E016C81FFFA27ECAF8DBFC3570A5" box="[940,955,1482,1506]" italics="true" pageId="3" pageNumber="38">β</emphasis>
|
||||
-glucosidase, L- arabinose in
|
||||
<collectionCode id="ED7DA4C1C81FFFA27980F8DBFA9E70A5" box="[1254,1296,1482,1506]" pageId="3" pageNumber="38">API</collectionCode>
|
||||
20NE, but negative for nitrate reduction, reduction of nitrates to nitrogen, indole production, glucose acidification, arginine dihydrolase, urease, protease,
|
||||
<emphasis id="B918E016C81FFFA2790FFB3AFBF67304" box="[1129,1144,1579,1603]" italics="true" pageId="3" pageNumber="38">β</emphasis>
|
||||
-galactosidase, D- glucose, D- mannose, D- mannitol,
|
||||
<emphasis id="B918E016C81FFFA27941FB5DFBB67324" box="[1063,1080,1612,1635]" italics="true" pageId="3" pageNumber="38">N</emphasis>
|
||||
-acetyl-glucosamine, D- maltose, gluconate, caprate, adipate, malate, citrate, phenyl-acetate.
|
||||
<subScript id="17E83E41C81FFFA27E4FFB83FCB173E4" attach="none" box="[809,831,1676,1699]" fontSize="7" pageId="3" pageNumber="38">D-</subScript>
|
||||
melibiose and
|
||||
<subScript id="17E83E41C81FFFA27EBDFB83FC6273E3" attach="right" box="[987,1004,1676,1700]" fontSize="7" pageId="3" pageNumber="38">L-</subScript>
|
||||
arabinose are utilized. Does not utilize D- mannitol, D- glucose, salicin, L- fucose, D- sorbitol, propionate, caprate, valerate, citrate, L- histidine, 2-ketogluconate, 3-hydroxy-butyrate, 4-hydroxy-benzoate, L- proline,
|
||||
<subScript id="17E83E41C81FFFA27E4FFA02FCB27262" attach="none" box="[809,828,1805,1829]" fontSize="7" pageId="3" pageNumber="38">L-</subScript>
|
||||
rhamnose,
|
||||
<emphasis id="B918E016C81FFFA27EDCFA1FFC427262" box="[954,972,1806,1829]" italics="true" pageId="3" pageNumber="38">N</emphasis>
|
||||
-acetyl-glucosamine,
|
||||
<subScript id="17E83E41C81FFFA279D9FA02FB587263" attach="right" box="[1215,1238,1805,1828]" fontSize="7" pageId="3" pageNumber="38">D-</subScript>
|
||||
ribose, inositol, D- sucrose, D- maltose, itaconate, suberate, malonate, acetate, D, L- lactate, L- alanine, 5-ketogluconate, glycogen, 3-hydroxy-benzoate, and L- serine.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="C3766F8FC81FFFA47E26FA9FFD2470CA" lastPageId="5" lastPageNumber="40" pageId="3" pageNumber="38" type="description">
|
||||
<paragraph id="8BD33C04C81FFFA47E26FA9FFD2470CA" blockId="3.[809,1415,1385,1990]" lastBlockId="5.[144,682,1397,1422]" lastPageId="5" lastPageNumber="40" pageId="3" pageNumber="38">
|
||||
Strain M3 (= NIBRBAC000503070) was isolated from the intestinal tract of a finless porpoise (
|
||||
<taxonomicName id="4C6C4787C81FFFA47996FABFFE9170CA" baseAuthorityName="G. Cuvier" baseAuthorityYear="1829" class="Mammalia" family="Phocoenidae" genus="Neophocaena" kingdom="Animalia" lastPageId="5" lastPageNumber="40" order="Cetacea" pageId="3" pageNumber="38" phylum="Chordata" rank="species" species="phocaenoides">
|
||||
<emphasis id="B918E016C81FFFA47996FABFFE9170CA" italics="true" lastPageId="5" lastPageNumber="40" pageId="3" pageNumber="38">Neophocaena phocaenoides</emphasis>
|
||||
</taxonomicName>
|
||||
),
|
||||
<collectingRegion id="49A8F2E6C819FFA47C52F864FDD770CA" box="[308,601,1397,1421]" country="South Korea" name="Chungnam" pageId="5" pageNumber="40">Chungcheongnam Province</collectingRegion>
|
||||
,
|
||||
<collectingCountry id="F37B7C94C819FFA47F05F867FD2870CA" box="[611,678,1398,1421]" name="South Korea" pageId="5" pageNumber="40">Korea</collectingCountry>
|
||||
.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
</treatment>
|
||||
</document>
|
||||
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