172 lines
15 KiB
XML
172 lines
15 KiB
XML
<document id="9D665CBFE5D5FF7C86B072474C10C122" ID-DOI="10.1051/parasite/2023057" ID-ISSN="1776-1042" ID-PMC="PMC10714680" ID-PubMed="38084939" ID-Zenodo-Dep="12524515" IM.bibliography_approvedBy="valdenar" IM.illustrations_approvedBy="valdenar" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="valdenar" checkinTime="1719279849764" checkinUser="felipe" docAuthor="Su, Si, Hong, Mei, Cui, Meng-Yu, Gui, Zheng, Ma, Shi-Fa, Wu, Lin, Xing, Li-Li, Mu, Lan, Yu, Jing-Feng, Fu, Shao-Yin, Gao, Rui-Juan & Qi, Dong-Dong" docDate="2023" docId="039C6B19A94AD2223A18F89C70AAFA53" docLanguage="en" docName="Parasite.30.58.pdf" docOrigin="Parasite (Paris, France) 30 (58)" docSource="http://dx.doi.org/10.1051/parasite/2023057" docStyle="DocumentStyle:A40D95A4C09C797DBB807E438D2BF437.2:Parasite.2013-.journal_article" docStyleId="A40D95A4C09C797DBB807E438D2BF437" docStyleName="Parasite.2013-.journal_article" docStyleVersion="2" docTitle="Rickettsiales" docType="treatment" docVersion="3" lastPageNumber="5" masterDocId="FFA51361A94ED2243935FFE87052FF16" masterDocTitle="Microbial diversity of ticks and a novel typhus group Rickettsia species (Rickettsiales bacterium Ac 37 b) in Inner Mongolia, China" masterLastPageNumber="13" masterPageNumber="1" pageNumber="5" updateTime="1721140996003" updateUser="valdenar" zenodo-license-document="CC-BY-4.0">
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<mods:titleInfo id="9E3936BA40B5FA267DD87A3E385AAA5D">
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<mods:title id="177A898007BD10B6A4CA6D6D40D97FAC">Microbial diversity of ticks and a novel typhus group Rickettsia species (Rickettsiales bacterium Ac 37 b) in Inner Mongolia, China</mods:title>
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<mods:namePart id="00363FD6C54686BEADDBDC4BA41BB67B">Su, Si</mods:namePart>
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<mods:affiliation id="79AC0FD2B3BF388E07FD445DA468967D">Graduate School, Inner Mongolia Medical University, Hohhot 010059, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="EC9E7AC5AC102F4A01A44BCBE7E6A191">Hong, Mei</mods:namePart>
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<mods:affiliation id="4DA78058A5C40611E685D1580A9FF6FC">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="2055F9DA8EC4F2E3A4752B6465FAFDE3">Cui, Meng-Yu</mods:namePart>
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<mods:affiliation id="58592F2568A1EAC1C4C879019BBF123F">Graduate School, Inner Mongolia Medical University, Hohhot 010059, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="D2FEA907671D385B47C7049BD3737722">Gui, Zheng</mods:namePart>
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<mods:affiliation id="9557CEF13AAF18DD61E0420CC95E46D1">First Hospital of Jilin University, Changchun 130021, China</mods:affiliation>
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<mods:namePart id="E39997D40F3B277580A30A5FA20A2DE6">Ma, Shi-Fa</mods:namePart>
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<mods:affiliation id="9D5233FFA0F994010451CBB7C3D44444">Hulunbuir Mental Health Center, Hulunbuir 022150, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="D3F5E6BFC052EC3435C13F6E84A06BE3">Wu, Lin</mods:namePart>
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<mods:affiliation id="DE6F350CEF1F1F9CB9C32370C4E8FCE3">Beijing Guoke Biotechnology Co., Ltd, 102200 Beijing, China</mods:affiliation>
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<mods:namePart id="14CE7DD1562A9B4EA3FDB1779197782E">Xing, Li-Li</mods:namePart>
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<mods:affiliation id="C9A0F8652DACC483847656BA4A21D306">Department of Infection Control, Second Affiliated Hospital of Inner Mongolia Medical University, Hohhot, Inner Mongolia Autonomous Region 010000, China</mods:affiliation>
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<mods:namePart id="5AAE4B7DDE0ECA43D8C627320A542209">Mu, Lan</mods:namePart>
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<mods:affiliation id="D64E7C6B50BD2A63D370F3D7252626C4">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="91EAEC13A01D10A1049B94E0BB58AFF3">Yu, Jing-Feng</mods:namePart>
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<mods:affiliation id="A3FA3419212E4CD82CA308E37D112812">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="8E614364621E9361B1B9A7E13CD74010">Fu, Shao-Yin</mods:namePart>
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<mods:affiliation id="8FA5216492A72759A275964E77B3D882">Inner Mongolia Academy of Agricultural & Animal Husbandry Science, Hohhot 010031, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="C1C5C3621B466E84BD7DBF5817BD4E1E">Gao, Rui-Juan</mods:namePart>
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<mods:affiliation id="C91FF07E8147CE598877D6EF460F7730">School of Basic Medicine, Inner Mongolia Medical University, Hohhot 010110, Inner Mongolia, China</mods:affiliation>
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<mods:namePart id="1996D3D3B0A24C42ED3AB50BF7860272">Qi, Dong-Dong</mods:namePart>
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<mods:affiliation id="5295385BF9C50F41DD35351CBBA3289C">Hulunbuir Mental Health Center, Hulunbuir 022150, Inner Mongolia, China</mods:affiliation>
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<mods:date id="C6916826CA3D2BB6AD75E76DA0BF3823">2023</mods:date>
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<mods:title id="1A2340BE4948AAD28692A142D2A08597">Paris, France</mods:title>
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<mods:number id="50DED7B455313105D6EF325086DE5905">30</mods:number>
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<mods:number id="78EF16A9F7FF214DE579BD114A58B343">58</mods:number>
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<treatment id="039C6B19A94AD2223A18F89C70AAFA53" LSID="urn:lsid:plazi:treatment:039C6B19A94AD2223A18F89C70AAFA53" httpUri="http://treatment.plazi.org/id/039C6B19A94AD2223A18F89C70AAFA53" lastPageId="6" lastPageNumber="5" pageId="4" pageNumber="5">
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<subSubSection id="C32F8984A94AD2203A18F89C732EF8BB" pageId="4" pageNumber="5" type="nomenclature">
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<paragraph id="8B8ADA0FA94AD2203A18F89C732EF8BB" blockId="4.[813,1429,1908,1965]" pageId="4" pageNumber="5">
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<heading id="D0C26D63A94AD2203A18F89C732EF8BB" fontSize="9" level="2" pageId="4" pageNumber="5" reason="4">
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<emphasis id="B941061DA94AD2203A18F89C732EF8BB" bold="true" pageId="4" pageNumber="5">
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Phylogenetic analysis of
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<taxonomicName id="4C35A18CA94AD2203D59F89C755CF89B" ID-CoL="8ZXYL" box="[1132,1294,1908,1933]" class="Alphaproteobacteria" kingdom="Bacteria" order="Rickettsiales" pageId="4" pageNumber="5" phylum="Proteobacteria" rank="order">
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<emphasis id="B941061DA94AD2203D59F89C755CF89B" bold="true" box="[1132,1294,1908,1933]" italics="true" pageId="4" pageNumber="5">Rickettsiales</emphasis>
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</taxonomicName>
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bacterium Ac37b
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</emphasis>
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</heading>
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</paragraph>
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<subSubSection id="C32F8984A94AD2203A60F82275E9F8F7" box="[853,1467,1994,2017]" pageId="4" pageNumber="5" type="etymology">
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<paragraph id="8B8ADA0FA94AD2203A60F82275E9F8F7" blockId="4.[813,1467,1994,2047]" box="[853,1467,1994,2017]" pageId="4" pageNumber="5">
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The
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<taxonomicName id="4C35A18CA94AD2203AA1F8227446F8F7" box="[916,1044,1994,2017]" class="Alphaproteobacteria" kingdom="Bacteria" order="Rickettsiales" pageId="4" pageNumber="5" phylum="Proteobacteria" rank="order">
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<emphasis id="B941061DA94AD2203AA1F8227446F8F7" box="[916,1044,1994,2017]" italics="true" pageId="4" pageNumber="5">Rickettsiales</emphasis>
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</taxonomicName>
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bacterium Ac37b (OP286853 and
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</paragraph>
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<subSubSection id="C32F8984A94AD2223A18F80070AAFA53" lastPageId="6" lastPageNumber="7" pageId="4" pageNumber="5" type="description">
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<paragraph id="8B8ADA0FA94AD2223A18F80070AAFA53" blockId="4.[813,1467,1994,2047]" lastBlockId="6.[113,767,1112,1349]" lastPageId="6" lastPageNumber="7" pageId="4" pageNumber="5">
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OP286855) sequences were randomly selected to build a phylogenetic tree, named after regions and displayed on the phylogenetic tree with squares and triangles (
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<figureCitation id="130EC68AA948D2223B2CFB9F7233FB98" box="[537,609,1143,1166]" captionStart="Figure 9" captionStartId="8.[113,180,1580,1601]" captionTargetBox="[151,1436,238,1560]" captionTargetId="figure-103@8.[151,1436,238,1560]" captionTargetPageId="8" captionText="Figure 9. Phylogenetic tree of Rickettsiales bacterium Ac37b, Rickettsia bellii, Rickettsia raoultii, Anaplasma and Coxiella in ticks based on neighbor-joining (NJ) modeling; only values higher than 60 were added to the tree branches. (a) Phylogenetic tree of Rickettsiales bacterium Ac37b identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1320 bp) and triangles (1430 bp). (b) Phylogenetic tree of Rickettsia bellii identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1109 bp). (c) Phylogenetic tree of Rickettsia raoultii identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (855 bp). (d) Phylogenetic tree of Anaplasma identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1455 bp) and triangles (547 bp). (e) Phylogenetic tree of Coxiella identified in Inner Mongolia; the 16S rRNA gene sequences obtained in this study are marked with black squares (1463 bp)." figureDoi="http://doi.org/10.5281/zenodo.12524531" httpUri="https://zenodo.org/record/12524531/files/figure.png" pageId="6" pageNumber="7">Fig. 9a</figureCitation>
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). The phylogenetic tree of the 16S rRNA gene showed that
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<taxonomicName id="4C35A18CA948D2223B4AFB7E72ADFBBB" box="[639,767,1174,1197]" class="Alphaproteobacteria" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="order">
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<emphasis id="B941061DA948D2223B4AFB7E72ADFBBB" box="[639,767,1174,1197]" italics="true" pageId="6" pageNumber="7">Rickettsiales</emphasis>
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</taxonomicName>
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bacterium Ac37b found in Inner Mongolia is in the same branch as the
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<taxonomicName id="4C35A18CA948D22239F7FB3B7110FBFC" box="[194,322,1235,1258]" class="Alphaproteobacteria" kingdom="Bacteria" order="Rickettsiales" pageId="6" pageNumber="7" phylum="Proteobacteria" rank="order">
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<emphasis id="B941061DA948D22239F7FB3B7110FBFC" box="[194,322,1235,1258]" italics="true" pageId="6" pageNumber="7">Rickettsiales</emphasis>
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</taxonomicName>
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bacterium Ac37b (CP009217) found in
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<taxonomicName id="4C35A18CA948D2223944FB197123FA1E" box="[113,369,1265,1288]" class="Arachnida" family="Ixodidae" genus="Amblyomma" kingdom="Animalia" order="Ixodida" pageId="6" pageNumber="7" phylum="Arthropoda" rank="species" species="cajennense">
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<emphasis id="B941061DA948D2223944FB197123FA1E" box="[113,369,1265,1288]" italics="true" pageId="6" pageNumber="7">Amblyomma cajennense</emphasis>
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</taxonomicName>
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from
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<collectingCountry id="F3229A9FA948D222388EFB1971AEFA1E" box="[443,508,1265,1288]" name="Brazil" pageId="6" pageNumber="7">Brazil</collectingCountry>
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, and their homology is 100% according to sequence alignment analysis using
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<collectionCode id="ED2442CAA948D2223B87FAF872ADFA31" box="[690,767,1296,1319]" pageId="6" pageNumber="7">MEGA</collectionCode>
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7.0 software.
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</paragraph>
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</treatment>
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