494 lines
35 KiB
XML
494 lines
35 KiB
XML
<document ID-DOI="10.1099/ijs.0.028423-0" ID-GBIF-Dataset="4231de44-044f-4c4a-855b-2b3b1fadcfe8" ID-GBIF-Taxon="123198512" ID-Zenodo-Dep="269421" checkinTime="1469025345438" checkinUser="plazi" docAuthor="Ming Liu, Huan Qi, Xuesong Luo, Jun Dai, Fang Peng and Chengxiang Fang" docDate="2012" docId="6A5DC857FFB8836E9916CAF14E843D95" docLanguage="en" docName="96.full.pdf.imf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 62" docStyle="DocumentStylede.uka.ipd.idaho.easyIO.settings.Settings@45d8854c" docStyleName="ijsem.0000.journal_article" docTitle="Cesiribacter roseus Liu, 2012, sp. nov." docType="treatment" docVersion="6" lastPageNumber="98" masterDocId="9664B02FFFBA836C9A27CA474B283830" masterDocTitle="Cesiribacter roseus sp. nov., a pink-pigmented bacterium isolated from desert sand" masterLastPageNumber="99" masterPageNumber="96" pageId="2" pageNumber="98" updateTime="1636500710987" updateUser="ExternalLinkService">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>Cesiribacter roseus sp. nov., a pink-pigmented bacterium isolated from desert sand</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Ming Liu, Huan Qi, Xuesong Luo, Jun Dai, Fang Peng and Chengxiang Fang</mods:namePart>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>International Journal of Systematic and Evolutionary Microbiology</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2012</mods:date>
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<mods:detail type="volume">
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<mods:number>62</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>96</mods:start>
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<mods:end>99</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">10.1099/ijs.0.028423-0</mods:identifier>
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<mods:identifier type="GBIF-Dataset">4231de44-044f-4c4a-855b-2b3b1fadcfe8</mods:identifier>
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<mods:identifier type="Zenodo-Dep">269421</mods:identifier>
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</mods:mods>
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<treatment ID-GBIF-Taxon="123198512" LSID="urn:lsid:plazi:treatment:6A5DC857FFB8836E9916CAF14E843D95" httpUri="http://treatment.plazi.org/id/6A5DC857FFB8836E9916CAF14E843D95" lastPageNumber="98" pageId="2" pageNumber="98">
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<subSubSection box="[817,1372,182,207]" pageId="2" pageNumber="98" type="nomenclature">
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<paragraph blockId="2.[817,1372,182,207]" box="[817,1372,182,207]" pageId="2" pageNumber="98">
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<heading bold="true" box="[817,1372,182,207]" fontSize="10" level="1" pageId="2" pageNumber="98" reason="0">
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<emphasis bold="true" box="[817,1372,182,207]" pageId="2" pageNumber="98">
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Description of
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<taxonomicName box="[1008,1265,182,207]" class="Cytophagia" family="Flammeovirgaceae" genus="Cesiribacter" higherTaxonomySource="GBIF,CoL" kingdom="Bacteria" order="Cytophagales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="roseus" status="sp. nov.">
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<emphasis bold="true" box="[1008,1265,182,207]" italics="true" pageId="2" pageNumber="98">Cesiribacter roseus</emphasis>
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</taxonomicName>
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<taxonomicNameLabel box="[1274,1372,183,207]" pageId="2" pageNumber="98" rank="species">sp. nov.</taxonomicNameLabel>
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</emphasis>
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</heading>
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||
</paragraph>
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||
</subSubSection>
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<subSubSection pageId="2" pageNumber="98" type="etymology">
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<paragraph blockId="2.[817,1452,227,283]" pageId="2" pageNumber="98">
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<taxonomicName box="[817,1019,228,252]" class="Cytophagia" family="Flammeovirgaceae" genus="Cesiribacter" higherTaxonomySource="GBIF,CoL" kingdom="Bacteria" order="Cytophagales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="roseus">
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<emphasis box="[817,1019,228,252]" italics="true" pageId="2" pageNumber="98">Cesiribacter roseus</emphasis>
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</taxonomicName>
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(ro ′se.us. L. masc. adj.
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<taxonomicName box="[1319,1381,229,252]" class="Cytophagia" family="Flammeovirgaceae" genus="Cesiribacter" higherTaxonomySource="GBIF,CoL" kingdom="Bacteria" order="Cytophagales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="roseus">
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<emphasis box="[1319,1381,229,252]" italics="true" pageId="2" pageNumber="98">roseus</emphasis>
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</taxonomicName>
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rosecoloured, pink).
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</paragraph>
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</subSubSection>
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<tableNote pageId="2" pageNumber="98" targetBox="[130,719,477,951]" targetPageId="2">
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<paragraph blockId="2.[113,748,259,437]" box="[113,748,259,284]" pageId="2" pageNumber="98">
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Strains: 1, 311T; 2,
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<taxonomicName box="[306,540,265,284]" class="Cytophagia" family="Flammeovirgaceae" genus="Cesiribacter" higherTaxonomySource="GBIF,CoL" kingdom="Bacteria" order="Cytophagales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="andamanensis">
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<emphasis box="[306,540,265,284]" italics="true" pageId="2" pageNumber="98">Cesiribacter andamanensis</emphasis>
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</taxonomicName>
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AMV16T (data from
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</paragraph>
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<paragraph blockId="2.[113,748,259,437]" box="[113,748,289,315]" pageId="2" pageNumber="98">
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Srinivas
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<emphasis box="[187,228,295,314]" italics="true" pageId="2" pageNumber="98">et al.</emphasis>
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, 2 0 1 1); 3,
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<taxonomicName box="[317,486,296,314]" class="Cytophagia" family="Flammeovirgaceae" genus="Marivirga" higherTaxonomySource="GBIF,CoL" kingdom="Bacteria" order="Cytophagales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="tractuosa">
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<emphasis box="[317,486,296,314]" italics="true" pageId="2" pageNumber="98">Marivirga tractuosa</emphasis>
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</taxonomicName>
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NBRC 15989T [data from this
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</paragraph>
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<subSubSection pageId="2" pageNumber="98" type="description">
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<paragraph blockId="2.[817,1453,305,1445]" pageId="2" pageNumber="98">
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Cells are Gram-negative rods (1.5–
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<date box="[1193,1232,305,329]" pageId="2" pageNumber="98">3X</date>
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0.4–0.5 µm) with an irregular fibril structure and are motile and strictly aerobic. Catalase-positive and oxidase-negative. Colonies are pink, circular and convex with regular margins. Flexirubin is detected. Growth occurs at 4–37
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<emphasis bold="true" box="[1186,1195,428,447]" pageId="2" pageNumber="98">°</emphasis>
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||
<collectionCode box="[1195,1212,427,451]" country="Denmark" httpUri="http://grbio.org/cool/na0h-6vfh" name="University of Copenhagen" pageId="2" pageNumber="98">C</collectionCode>
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(optimum 30
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<emphasis bold="true" box="[1379,1388,428,447]" pageId="2" pageNumber="98">°</emphasis>
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C), at
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<collectingCountry box="[817,852,458,482]" name="Philippines" pageId="2" pageNumber="98">pH</collectingCountry>
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7–10 (optimum
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<collectingCountry box="[1043,1078,458,482]" name="Philippines" pageId="2" pageNumber="98">pH</collectingCountry>
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8) and at NaCl concentrations of up to 3.0 % (optimum 2.0 %). Positive for hydrolysis of aesculin, casein, starch and gelatin. In
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<potCollectionCode box="[1337,1378,519,543]" pageId="2" pageNumber="98">API</potCollectionCode>
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<potCollectionCode box="[1396,1452,519,543]" pageId="2" pageNumber="98">ZYM</potCollectionCode>
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tests, positive for alkaline phosphatase, esterase (
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<collectionCodeEnum box="[1346,1366,549,573]" pageId="2" pageNumber="98">
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<collectionCode box="[1346,1366,549,573]" country="Denmark" httpUri="http://grbio.org/cool/na0h-6vfh" name="University of Copenhagen" pageId="2" pageNumber="98">C</collectionCode>
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</collectionCodeEnum>
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4), esterase lipase (
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<collectionCodeEnum box="[951,972,580,604]" pageId="2" pageNumber="98">
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<collectionCode box="[951,972,580,604]" country="Denmark" httpUri="http://grbio.org/cool/na0h-6vfh" name="University of Copenhagen" pageId="2" pageNumber="98">C</collectionCode>
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</collectionCodeEnum>
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8), leucine arylamidase, valine arylamidase, naphthol-AS-BI-phosphohydrolase,
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<emphasis bold="true" box="[1228,1241,612,633]" italics="true" pageId="2" pageNumber="98">
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<potCollectionCode box="[1228,1241,612,633]" pageId="2" pageNumber="98">OE</potCollectionCode>
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</emphasis>
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-galactosidase,
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<emphasis box="[1423,1442,611,634]" italics="true" pageId="2" pageNumber="98">
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<collectionCodeEnum box="[1423,1442,611,634]" pageId="2" pageNumber="98">N</collectionCodeEnum>
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</emphasis>
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- acetyl-
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<emphasis bold="true" box="[887,901,642,665]" italics="true" pageId="2" pageNumber="98">β</emphasis>
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-glucosaminidase and
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<emphasis bold="true" box="[1153,1166,643,664]" italics="true" pageId="2" pageNumber="98">
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<potCollectionCode box="[1153,1166,643,664]" pageId="2" pageNumber="98">OE</potCollectionCode>
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</emphasis>
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-glucosidase, but negative for lipase (
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<collectionCodeEnum box="[944,964,672,696]" pageId="2" pageNumber="98">C</collectionCodeEnum>
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14), cystine arylamidase, trypsin,
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<emphasis bold="true" box="[1347,1360,673,694]" italics="true" pageId="2" pageNumber="98">
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<potCollectionCode box="[1347,1360,673,694]" pageId="2" pageNumber="98">OE</potCollectionCode>
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</emphasis>
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-chymotrypsin, acid phosphatase,
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<emphasis bold="true" box="[1130,1144,703,726]" italics="true" pageId="2" pageNumber="98">β</emphasis>
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-galactosidase,
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<emphasis bold="true" box="[1315,1329,703,726]" italics="true" pageId="2" pageNumber="98">β</emphasis>
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-glucuronidase,
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<emphasis bold="true" box="[883,897,734,757]" italics="true" pageId="2" pageNumber="98">β</emphasis>
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||
-glucosidase,
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<emphasis bold="true" box="[1048,1061,735,756]" italics="true" pageId="2" pageNumber="98">
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<potCollectionCode box="[1048,1061,735,756]" pageId="2" pageNumber="98">OE</potCollectionCode>
|
||
</emphasis>
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||
-mannosidase and
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<emphasis bold="true" box="[1276,1289,735,756]" italics="true" pageId="2" pageNumber="98">
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<potCollectionCode box="[1276,1289,735,756]" pageId="2" pageNumber="98">OE</potCollectionCode>
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</emphasis>
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||
-fucosidase. In
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<potCollectionCode box="[817,858,764,788]" pageId="2" pageNumber="98">API</potCollectionCode>
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20
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||
<collectionCodeEnum box="[895,930,764,788]" pageId="2" pageNumber="98">
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<potCollectionCode box="[895,930,764,788]" pageId="2" pageNumber="98">
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||
<collectionCode box="[895,930,764,788]" country="Australia" httpUri="http://biocol.org/urn:lsid:biocol.org:col:14575" name="University of New England" pageId="2" pageNumber="98">NE</collectionCode>
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</potCollectionCode>
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||
</collectionCodeEnum>
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||
test strips, positive reactions are observed for nitrate reduction, aesculin hydrolysis, gelatin hydrolysis and
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<emphasis bold="true" box="[874,888,826,849]" italics="true" pageId="2" pageNumber="98">β</emphasis>
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||
-galactosidase (weak) and negative reactions are observed for arginine dihydrolase, indole production, urease and glucose fermentation. Does not assimilate
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<potCollectionCode box="[1428,1452,886,910]" pageId="2" pageNumber="98">D-</potCollectionCode>
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||
glucose, L- arabinose, maltose,
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||
<potCollectionCode box="[1177,1198,916,940]" pageId="2" pageNumber="98">D-</potCollectionCode>
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||
mannose,
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||
<potCollectionCode box="[1323,1344,916,940]" pageId="2" pageNumber="98">D-</potCollectionCode>
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||
mannitol,
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||
<emphasis box="[817,836,948,971]" italics="true" pageId="2" pageNumber="98">
|
||
<collectionCodeEnum box="[817,836,948,971]" pageId="2" pageNumber="98">
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||
<collectionCode box="[817,836,948,971]" country="China" httpUri="http://biocol.org/urn:lsid:biocol.org:col:13092" name="Nanjing University" pageId="2" pageNumber="98">N</collectionCode>
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</collectionCodeEnum>
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||
</emphasis>
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||
-acetylglucosamine, adipic acid, capric acid, malic acid, potassium gluconate, trisodium citrate or phenylacetic acid. In
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<potCollectionCode box="[919,960,1008,1032]" pageId="2" pageNumber="98">API</potCollectionCode>
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||
20
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||
<collectionCodeEnum box="[999,1014,1008,1032]" pageId="2" pageNumber="98">E</collectionCodeEnum>
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||
tests, shows positive reactions for
|
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<emphasis bold="true" box="[1428,1442,1009,1032]" italics="true" pageId="2" pageNumber="98">β</emphasis>
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||
- galactosidase (weak), tryptophan deaminase and gelatin hydrolysis, weakly positive reactions for oxidation of sucrose, melibiose, amygdalin and arabinose and negative reactions for arginine dihydrolase, lysine decarboxylase, ornithine decarboxylase, citrate utilization,
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<collectionCode box="[1309,1329,1161,1185]" country="Finland" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15618" name="University of Helsinki" pageId="2" pageNumber="98">
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||
<collectionCodeEnum box="[1309,1329,1161,1185]" pageId="2" pageNumber="98">H</collectionCodeEnum>
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||
</collectionCode>
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||
2
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||
<collectionCodeEnum box="[1339,1352,1161,1185]" pageId="2" pageNumber="98">S</collectionCodeEnum>
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||
production, Voges–Proskauer reaction, urease, indole production and oxidation of glucose, mannitol, inositol, sorbitol and rhamnose. Susceptible to (per disc) erythromycin (15 µg), vancomycin (30 µg), acheomycin (30 µg) and penicillin (10
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<collectionCode box="[861,894,1314,1338]" pageId="2" pageNumber="98">
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<collectionCodeEnum box="[861,894,1314,1338]" pageId="2" pageNumber="98">
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<potCollectionCode box="[861,894,1314,1338]" pageId="2" pageNumber="98">IU</potCollectionCode>
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</collectionCodeEnum>
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</collectionCode>
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). The major quinone is
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<potCollectionCode box="[1182,1236,1314,1338]" pageId="2" pageNumber="98">MK-</potCollectionCode>
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||
7. The
|
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<collectionCodeEnum box="[1320,1408,1314,1338]" pageId="2" pageNumber="98">
|
||
<collectionCodeEnum box="[1320,1376,1314,1338]" pageId="2" pageNumber="98">
|
||
<collectionCode box="[1320,1376,1314,1338]" country="Australia" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15536" name="Department of Natural Resources, Environment, The Arts and Sport" pageId="2" pageNumber="98">
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||
<potCollectionCode box="[1320,1376,1314,1338]" pageId="2" pageNumber="98">DNA</potCollectionCode>
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||
</collectionCode>
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||
</collectionCodeEnum>
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||
<collectionCode box="[1389,1408,1314,1338]" pageId="2" pageNumber="98">
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||
<collectionCodeEnum box="[1389,1408,1314,1338]" pageId="2" pageNumber="98">G</collectionCodeEnum>
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||
</collectionCode>
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||
</collectionCodeEnum>
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||
+
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||
<collectionCode box="[1434,1451,1314,1338]" pageId="2" pageNumber="98">
|
||
<collectionCodeEnum box="[1434,1451,1314,1338]" pageId="2" pageNumber="98">C</collectionCodeEnum>
|
||
</collectionCode>
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||
content of the
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<typeStatus box="[980,1025,1345,1369]" pageId="2" pageNumber="98">type</typeStatus>
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strain is 47.1 mol%.
|
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</paragraph>
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||
</subSubSection>
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||
<paragraph blockId="2.[113,748,259,437]" box="[113,748,323,345]" pageId="2" pageNumber="98">
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||
study after growth on 0.1X TSA (Difco) with 1 % NaCl at 30
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<emphasis bold="true" box="[691,700,323,342]" pageId="2" pageNumber="98">°</emphasis>
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||
C for
|
||
</paragraph>
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||
<paragraph blockId="2.[113,748,259,437]" box="[113,747,350,376]" pageId="2" pageNumber="98">
|
||
4 days]; 4,
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<taxonomicName box="[205,424,356,375]" class="Sphingobacteria" family="Flexibacteraceae" genus="Roseivirga" kingdom="Bacteria" order="Sphingobacteriales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="echinicomitans">
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||
<emphasis box="[205,424,356,375]" italics="true" pageId="2" pageNumber="98">Roseivirga echinicomitans</emphasis>
|
||
</taxonomicName>
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||
KMM 6058T (
|
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<bibRefCitation author="Nedashkovskaya, O. I. & Kim, S. B. & Lysenko, A. M. & Park, M. S. & Mikhailov, V. V. & Bae, K. S. & Park, H. Y." journalOrPublisher="Int J Syst Evol Microbiol" pageId="2" pageNumber="98" pagination="1797 - 1800" refString="Nedashkovskaya, O. I., Kim, S. B., Lysenko, A. M., Park, M. S., Mikhailov, V. V., Bae, K. S. & Park, H. Y. (2005 b). Roseivirga echinicomitans sp. nov., a novel marine bacterium isolated from the sea urchin Strongylocentrotus intermedius, and emended description of the genus Roseivirga. Int J Syst Evol Microbiol 55, 1797 - 1800." title="Roseivirga echinicomitans sp. nov., a novel marine bacterium isolated from the sea urchin Strongylocentrotus intermedius, and emended description of the genus Roseivirga" type="book chapter" year="2005" yearSuffix="b">
|
||
Nedashkovskaya
|
||
<emphasis box="[702,744,356,375]" italics="true" pageId="2" pageNumber="98">et al.</emphasis>
|
||
,
|
||
<paragraph blockId="2.[113,748,259,437]" box="[113,747,381,406]" pageId="2" pageNumber="98">
|
||
2005b); 5,
|
||
<taxonomicName box="[211,429,387,406]" class="Cytophagia" family="Flammeovirgaceae" genus="Marinoscillum" higherTaxonomySource="GBIF,CoL" kingdom="Bacteria" order="Cytophagales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="furvescens">
|
||
<emphasis box="[211,429,387,406]" italics="true" pageId="2" pageNumber="98">Marinoscillum furvescens</emphasis>
|
||
</taxonomicName>
|
||
DSM 4134T (
|
||
<bibRefCitation author="Seo, H. - S. & Kwon, K. K. & Yang, S. - H. & Lee, H. - S. & Bae, S. S. & Lee, J. - H. & Kim, S. - J." box="[557,702,387,406]" journalOrPublisher="Int J Syst Evol Microbiol" pageId="2" pageNumber="98" pagination="1204 - 1208" part="59" refString="Seo, H. - S., Kwon, K. K., Yang, S. - H., Lee, H. - S., Bae, S. S., Lee, J. - H. & Kim, S. - J. (2009). Marinoscillum gen. nov., a member of the family ' Flexibacteraceae ', with Marinoscillum pacificum sp. nov. from a marine sponge and Marinoscillum furvescens nom. rev., comb. nov. Int J Syst Evol Microbiol 59, 1204 - 1208." title="Marinoscillum gen. nov., a member of the family ' Flexibacteraceae ', with Marinoscillum pacificum sp. nov. from a marine sponge and Marinoscillum furvescens nom. rev., comb. nov" type="journal article" year="2009">
|
||
Seo
|
||
<emphasis box="[598,643,387,406]" italics="true" pageId="2" pageNumber="98">et al.</emphasis>
|
||
, 2009
|
||
</bibRefCitation>
|
||
).,
|
||
</paragraph>
|
||
</bibRefCitation>
|
||
</paragraph>
|
||
<paragraph blockId="2.[113,748,259,437]" pageId="2" pageNumber="98">ND Not detected; tr, <1 %.</paragraph>
|
||
</tableNote>
|
||
<paragraph pageId="2" pageNumber="98">
|
||
<table box="[130,719,477,951]" gridcols="6" gridrows="16" pageId="2" pageNumber="98">
|
||
<tr box="[130,719,477,496]" gridrow="0" pageId="2" pageNumber="98">
|
||
<emphasis bold="true" box="[130,475,477,496]" pageId="2" pageNumber="98">
|
||
<th box="[130,311,477,496]" gridcol="0" gridrow="0" pageId="2" pageNumber="98">
|
||
<emphasis bold="true" box="[130,225,477,496]" pageId="2" pageNumber="98">Fatty acid</emphasis>
|
||
</th>
|
||
<th box="[377,415,477,496]" gridcol="1" gridrow="0" pageId="2" pageNumber="98">
|
||
<emphasis bold="true" box="[391,402,477,496]" pageId="2" pageNumber="98">1</emphasis>
|
||
</th>
|
||
<th box="[455,493,477,496]" gridcol="2" gridrow="0" pageId="2" pageNumber="98">
|
||
<emphasis bold="true" box="[464,475,477,496]" pageId="2" pageNumber="98">2</emphasis>
|
||
*
|
||
</th>
|
||
</emphasis>
|
||
<emphasis bold="true" box="[547,705,477,496]" pageId="2" pageNumber="98">
|
||
<th box="[533,571,477,496]" gridcol="3" gridrow="0" pageId="2" pageNumber="98">
|
||
<emphasis bold="true" box="[547,558,477,496]" pageId="2" pageNumber="98">3</emphasis>
|
||
</th>
|
||
<th box="[611,649,477,496]" gridcol="4" gridrow="0" pageId="2" pageNumber="98">
|
||
<emphasis bold="true" box="[624,635,477,496]" pageId="2" pageNumber="98">4</emphasis>
|
||
</th>
|
||
<th box="[681,719,477,496]" gridcol="5" gridrow="0" pageId="2" pageNumber="98">
|
||
<emphasis bold="true" box="[694,705,477,496]" pageId="2" pageNumber="98">5</emphasis>
|
||
</th>
|
||
</emphasis>
|
||
</tr>
|
||
<tr box="[130,719,523,545]" gridrow="1" pageId="2" pageNumber="98">
|
||
<th box="[130,311,523,545]" gridcol="0" gridrow="1" pageId="2" pageNumber="98">
|
||
C16: 1
|
||
<emphasis bold="true" box="[179,194,523,542]" italics="true" pageId="2" pageNumber="98">ω</emphasis>
|
||
5
|
||
<emphasis box="[205,213,523,541]" italics="true" pageId="2" pageNumber="98">c</emphasis>
|
||
</th>
|
||
<td box="[377,415,523,545]" gridcol="1" gridrow="1" pageId="2" pageNumber="98">29.9</td>
|
||
<td box="[455,493,523,545]" gridcol="2" gridrow="1" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,523,545]" gridcol="3" gridrow="1" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[611,649,523,545]" gridcol="4" gridrow="1" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[681,719,523,545]" gridcol="5" gridrow="1" pageId="2" pageNumber="98">28.5</td>
|
||
</tr>
|
||
<tr box="[130,719,552,574]" gridrow="2" pageId="2" pageNumber="98">
|
||
<th box="[130,311,552,574]" gridcol="0" gridrow="2" pageId="2" pageNumber="98">iso-C15: 0</th>
|
||
<td box="[377,415,552,574]" gridcol="1" gridrow="2" pageId="2" pageNumber="98">21.9</td>
|
||
<td box="[455,493,552,574]" gridcol="2" gridrow="2" pageId="2" pageNumber="98">3.4</td>
|
||
<td box="[533,571,552,574]" gridcol="3" gridrow="2" pageId="2" pageNumber="98">44.7</td>
|
||
<td box="[611,649,552,574]" gridcol="4" gridrow="2" pageId="2" pageNumber="98">20.2</td>
|
||
<td box="[681,719,552,574]" gridcol="5" gridrow="2" pageId="2" pageNumber="98">8.5</td>
|
||
</tr>
|
||
<tr box="[130,719,581,603]" gridrow="3" pageId="2" pageNumber="98">
|
||
<th box="[130,311,581,603]" gridcol="0" gridrow="3" pageId="2" pageNumber="98">iso-C17: 0 3-OH</th>
|
||
<td box="[377,415,581,603]" gridcol="1" gridrow="3" pageId="2" pageNumber="98">13.3</td>
|
||
<td box="[455,493,581,603]" gridcol="2" gridrow="3" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,581,603]" gridcol="3" gridrow="3" pageId="2" pageNumber="98">10.6</td>
|
||
<td box="[611,649,581,603]" gridcol="4" gridrow="3" pageId="2" pageNumber="98">12.1</td>
|
||
<td box="[681,719,581,603]" gridcol="5" gridrow="3" pageId="2" pageNumber="98">9.8</td>
|
||
</tr>
|
||
<tr box="[130,719,610,632]" gridrow="4" pageId="2" pageNumber="98">
|
||
<th box="[130,311,610,632]" gridcol="0" gridrow="4" pageId="2" pageNumber="98">iso-C15: 1</th>
|
||
<td box="[377,415,610,632]" gridcol="1" gridrow="4" pageId="2" pageNumber="98">4.0</td>
|
||
<td box="[455,493,610,632]" gridcol="2" gridrow="4" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,610,632]" gridcol="3" gridrow="4" pageId="2" pageNumber="98">tr</td>
|
||
<td box="[611,649,610,632]" gridcol="4" gridrow="4" pageId="2" pageNumber="98">20.2</td>
|
||
<td box="[681,719,610,632]" gridcol="5" gridrow="4" pageId="2" pageNumber="98">3.2</td>
|
||
</tr>
|
||
<tr box="[130,719,640,662]" gridrow="5" pageId="2" pageNumber="98">
|
||
<th box="[130,311,640,662]" gridcol="0" gridrow="5" pageId="2" pageNumber="98">C18: 0</th>
|
||
<td box="[377,415,640,662]" gridcol="1" gridrow="5" pageId="2" pageNumber="98">3.7</td>
|
||
<td box="[455,493,640,662]" gridcol="2" gridrow="5" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,640,662]" gridcol="3" gridrow="5" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[611,649,640,662]" gridcol="4" gridrow="5" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[681,719,640,662]" gridcol="5" gridrow="5" pageId="2" pageNumber="98">ND</td>
|
||
</tr>
|
||
<tr box="[130,719,669,691]" gridrow="6" pageId="2" pageNumber="98">
|
||
<th box="[130,311,669,691]" gridcol="0" gridrow="6" pageId="2" pageNumber="98">iso-C17: 0</th>
|
||
<td box="[377,415,669,691]" gridcol="1" gridrow="6" pageId="2" pageNumber="98">3.2</td>
|
||
<td box="[455,493,669,691]" gridcol="2" gridrow="6" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,669,691]" gridcol="3" gridrow="6" pageId="2" pageNumber="98">tr</td>
|
||
<td box="[611,649,669,691]" gridcol="4" gridrow="6" pageId="2" pageNumber="98">1.0</td>
|
||
<td box="[681,719,669,691]" gridcol="5" gridrow="6" pageId="2" pageNumber="98">1.0</td>
|
||
</tr>
|
||
<tr box="[130,719,698,720]" gridrow="7" pageId="2" pageNumber="98">
|
||
<th box="[130,311,698,720]" gridcol="0" gridrow="7" pageId="2" pageNumber="98">iso-C15: 0 3-OH</th>
|
||
<td box="[377,415,698,720]" gridcol="1" gridrow="7" pageId="2" pageNumber="98">3.1</td>
|
||
<td box="[455,493,698,720]" gridcol="2" gridrow="7" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,698,720]" gridcol="3" gridrow="7" pageId="2" pageNumber="98">5.8</td>
|
||
<td box="[611,649,698,720]" gridcol="4" gridrow="7" pageId="2" pageNumber="98">4.1</td>
|
||
<td box="[681,719,698,720]" gridcol="5" gridrow="7" pageId="2" pageNumber="98">ND</td>
|
||
</tr>
|
||
<tr box="[130,719,727,749]" gridrow="8" pageId="2" pageNumber="98">
|
||
<th box="[130,311,727,749]" gridcol="0" gridrow="8" pageId="2" pageNumber="98">C16: 0</th>
|
||
<td box="[377,415,727,749]" gridcol="1" gridrow="8" pageId="2" pageNumber="98">3.7</td>
|
||
<td box="[455,493,727,749]" gridcol="2" gridrow="8" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,727,749]" gridcol="3" gridrow="8" pageId="2" pageNumber="98">1.7</td>
|
||
<td box="[611,649,727,749]" gridcol="4" gridrow="8" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[681,719,727,749]" gridcol="5" gridrow="8" pageId="2" pageNumber="98">3.5</td>
|
||
</tr>
|
||
<tr box="[130,719,757,779]" gridrow="9" pageId="2" pageNumber="98">
|
||
<th box="[130,311,757,779]" gridcol="0" gridrow="9" pageId="2" pageNumber="98">iso-C13: 0 3-OH</th>
|
||
<td box="[377,415,757,779]" gridcol="1" gridrow="9" pageId="2" pageNumber="98">1.1</td>
|
||
<td box="[455,493,757,779]" gridcol="2" gridrow="9" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,757,779]" gridcol="3" gridrow="9" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[611,649,757,779]" gridcol="4" gridrow="9" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[681,719,757,779]" gridcol="5" gridrow="9" pageId="2" pageNumber="98">ND</td>
|
||
</tr>
|
||
<tr box="[130,719,786,808]" gridrow="10" pageId="2" pageNumber="98">
|
||
<th box="[130,311,786,808]" gridcol="0" gridrow="10" pageId="2" pageNumber="98">
|
||
C18: 1
|
||
<emphasis bold="true" box="[179,194,786,805]" italics="true" pageId="2" pageNumber="98">ω</emphasis>
|
||
9
|
||
<emphasis box="[205,213,786,804]" italics="true" pageId="2" pageNumber="98">c</emphasis>
|
||
</th>
|
||
<td box="[377,415,786,808]" gridcol="1" gridrow="10" pageId="2" pageNumber="98">1.3</td>
|
||
<td box="[455,493,786,808]" gridcol="2" gridrow="10" pageId="2" pageNumber="98">13.8</td>
|
||
<td box="[533,571,786,808]" gridcol="3" gridrow="10" pageId="2" pageNumber="98">tr</td>
|
||
<td box="[611,649,786,808]" gridcol="4" gridrow="10" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[681,719,786,808]" gridcol="5" gridrow="10" pageId="2" pageNumber="98">ND</td>
|
||
</tr>
|
||
<tr box="[130,719,815,837]" gridrow="11" pageId="2" pageNumber="98">
|
||
<th box="[130,311,815,837]" gridcol="0" gridrow="11" pageId="2" pageNumber="98">
|
||
C18: 1
|
||
<emphasis bold="true" box="[179,194,815,834]" italics="true" pageId="2" pageNumber="98">ω</emphasis>
|
||
7
|
||
<emphasis box="[205,213,816,834]" italics="true" pageId="2" pageNumber="98">c</emphasis>
|
||
</th>
|
||
<td box="[377,415,815,837]" gridcol="1" gridrow="11" pageId="2" pageNumber="98">1.2</td>
|
||
<td box="[455,493,815,837]" gridcol="2" gridrow="11" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,815,837]" gridcol="3" gridrow="11" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[611,649,815,837]" gridcol="4" gridrow="11" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[681,719,815,837]" gridcol="5" gridrow="11" pageId="2" pageNumber="98">ND</td>
|
||
</tr>
|
||
<tr box="[130,719,844,866]" gridrow="12" pageId="2" pageNumber="98">
|
||
<th box="[130,311,844,866]" gridcol="0" gridrow="12" pageId="2" pageNumber="98">iso-C13: 0</th>
|
||
<td box="[377,415,844,866]" gridcol="1" gridrow="12" pageId="2" pageNumber="98">tr</td>
|
||
<td box="[455,493,844,866]" gridcol="2" gridrow="12" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,844,866]" gridcol="3" gridrow="12" pageId="2" pageNumber="98">5.5</td>
|
||
<td box="[611,649,844,866]" gridcol="4" gridrow="12" pageId="2" pageNumber="98">2.9</td>
|
||
<td box="[681,719,844,866]" gridcol="5" gridrow="12" pageId="2" pageNumber="98">ND</td>
|
||
</tr>
|
||
<tr box="[130,719,873,896]" gridrow="13" pageId="2" pageNumber="98">
|
||
<th box="[130,311,873,896]" gridcol="0" gridrow="13" pageId="2" pageNumber="98">
|
||
iso-C17: 1
|
||
<emphasis bold="true" box="[213,228,873,892]" italics="true" pageId="2" pageNumber="98">ω</emphasis>
|
||
9
|
||
<emphasis box="[239,247,874,892]" italics="true" pageId="2" pageNumber="98">c</emphasis>
|
||
</th>
|
||
<td box="[377,415,873,896]" gridcol="1" gridrow="13" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[455,493,873,896]" gridcol="2" gridrow="13" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,873,896]" gridcol="3" gridrow="13" pageId="2" pageNumber="98">15.0</td>
|
||
<td box="[611,649,873,896]" gridcol="4" gridrow="13" pageId="2" pageNumber="98">1.1</td>
|
||
<td box="[681,719,873,896]" gridcol="5" gridrow="13" pageId="2" pageNumber="98">ND</td>
|
||
</tr>
|
||
<tr box="[130,719,902,922]" gridrow="14" pageId="2" pageNumber="98">
|
||
<th box="[130,311,902,922]" gridcol="0" gridrow="14" pageId="2" pageNumber="98">
|
||
Summed feature 3
|
||
<emphasis bold="true" box="[300,311,902,922]" pageId="2" pageNumber="98">†</emphasis>
|
||
</th>
|
||
<td box="[377,415,902,922]" gridcol="1" gridrow="14" pageId="2" pageNumber="98">1.2</td>
|
||
<td box="[455,493,902,922]" gridcol="2" gridrow="14" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,902,922]" gridcol="3" gridrow="14" pageId="2" pageNumber="98">5.9</td>
|
||
<td box="[611,649,902,922]" gridcol="4" gridrow="14" pageId="2" pageNumber="98">1.0</td>
|
||
<td box="[681,719,902,922]" gridcol="5" gridrow="14" pageId="2" pageNumber="98">22.2</td>
|
||
</tr>
|
||
<tr box="[130,719,931,951]" gridrow="15" pageId="2" pageNumber="98">
|
||
<th box="[130,311,931,951]" gridcol="0" gridrow="15" pageId="2" pageNumber="98">
|
||
Summed feature 4
|
||
<emphasis bold="true" box="[300,311,931,951]" pageId="2" pageNumber="98">†</emphasis>
|
||
</th>
|
||
<td box="[377,415,931,951]" gridcol="1" gridrow="15" pageId="2" pageNumber="98">13.0</td>
|
||
<td box="[455,493,931,951]" gridcol="2" gridrow="15" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[533,571,931,951]" gridcol="3" gridrow="15" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[611,649,931,951]" gridcol="4" gridrow="15" pageId="2" pageNumber="98">ND</td>
|
||
<td box="[681,719,931,951]" gridcol="5" gridrow="15" pageId="2" pageNumber="98">1.0</td>
|
||
</tr>
|
||
</table>
|
||
</paragraph>
|
||
<tableNote pageId="2" pageNumber="98" targetBox="[130,719,477,951]" targetPageId="2">
|
||
<paragraph blockId="2.[113,748,988,1162]" pageId="2" pageNumber="98">
|
||
*
|
||
<taxonomicName box="[123,283,994,1014]" class="Cytophagia" family="Flammeovirgaceae" genus="Cesiribacter" higherTaxonomySource="GBIF,CoL" kingdom="Bacteria" order="Cytophagales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="andamanensis">
|
||
<emphasis box="[123,283,994,1014]" italics="true" pageId="2" pageNumber="98">C. andamanensis</emphasis>
|
||
</taxonomicName>
|
||
AMV16T also contained C (3.0 %), C 12: 0 13: 0
|
||
</paragraph>
|
||
<paragraph blockId="2.[113,748,988,1162]" box="[113,748,1023,1045]" pageId="2" pageNumber="98">(3.8 %), C14: 0 (3.0 %), anteiso-C14: 0 (15.1 %), anteiso-C15: 0 (4.6 %),</paragraph>
|
||
<paragraph blockId="2.[113,748,988,1162]" box="[113,747,1052,1075]" pageId="2" pageNumber="98">
|
||
C15: 0 (28.7 %), C16: 1
|
||
<emphasis bold="true" box="[309,324,1052,1071]" italics="true" pageId="2" pageNumber="98">ω</emphasis>
|
||
9
|
||
<emphasis box="[335,343,1053,1071]" italics="true" pageId="2" pageNumber="98">c</emphasis>
|
||
(23.9 %) and C18: 1
|
||
<emphasis bold="true" box="[526,541,1052,1071]" italics="true" pageId="2" pageNumber="98">ω</emphasis>
|
||
9
|
||
<emphasis box="[552,560,1053,1071]" italics="true" pageId="2" pageNumber="98">c</emphasis>
|
||
(13.8 %), which are
|
||
</paragraph>
|
||
<paragraph blockId="2.[113,748,988,1162]" box="[113,319,1082,1101]" pageId="2" pageNumber="98">not listed in the table.</paragraph>
|
||
<paragraph blockId="2.[113,748,988,1162]" box="[113,747,1110,1133]" pageId="2" pageNumber="98">
|
||
<emphasis bold="true" box="[113,124,1110,1130]" pageId="2" pageNumber="98">†</emphasis>
|
||
Summed feature 3 comprised iso-C15: 0 2-OH and/or C16: 1
|
||
<emphasis bold="true" box="[708,723,1111,1130]" italics="true" pageId="2" pageNumber="98">ω</emphasis>
|
||
7
|
||
<emphasis box="[734,742,1112,1130]" italics="true" pageId="2" pageNumber="98">c</emphasis>
|
||
.
|
||
</paragraph>
|
||
<paragraph blockId="2.[113,748,988,1162]" box="[113,717,1140,1162]" pageId="2" pageNumber="98">Summed feature 4 comprised iso-C17: 1 I and/or anteiso-C17: 1 B.</paragraph>
|
||
</tableNote>
|
||
<caption ID-Table-UUID="B68B29C9FFB8836E9A56CEBB4AF63D00" httpUri="http://table.plazi.org/id/B68B29C9FFB8836E9A56CEBB4AF63D00" pageId="2" pageNumber="98" targetBox="[130,719,1477,1893]" targetIsTable="true" targetPageId="2">
|
||
<paragraph blockId="2.[113,748,1271,1328]" pageId="2" pageNumber="98">
|
||
<emphasis bold="true" box="[113,204,1276,1298]" pageId="2" pageNumber="98">Table 2.</emphasis>
|
||
Differential characteristics between strain 311T and its phylogenetically closest relatives
|
||
</paragraph>
|
||
</caption>
|
||
<tableNote pageId="2" pageNumber="98" targetBox="[130,719,1477,1893]" targetPageId="2">
|
||
<paragraph blockId="2.[113,748,1351,1437]" box="[113,748,1351,1376]" pageId="2" pageNumber="98">
|
||
Strains: 1, strain 311T; 2,
|
||
<taxonomicName box="[377,535,1356,1376]" class="Cytophagia" family="Flammeovirgaceae" genus="Cesiribacter" higherTaxonomySource="GBIF,CoL" kingdom="Bacteria" order="Cytophagales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="andamanensis">
|
||
<emphasis box="[377,535,1356,1376]" italics="true" pageId="2" pageNumber="98">C. andamanensis</emphasis>
|
||
</taxonomicName>
|
||
AMV16T (data from
|
||
</paragraph>
|
||
<paragraph blockId="2.[113,748,1351,1437]" box="[113,748,1381,1406]" pageId="2" pageNumber="98">
|
||
<bibRefCitation author="Srinivas, T. N. R. & Anil Kumar, P. & Madhu, S. & Sunil, B. & Sharma, T. V. R. S. & Shivaji, S." box="[113,293,1387,1406]" journalOrPublisher="Int J Syst Evol Microbiol" pageId="2" pageNumber="98" pagination="1521 - 1527" part="61" refString="Srinivas, T. N. R., Anil Kumar, P., Madhu, S., Sunil, B., Sharma, T. V. R. S. & Shivaji, S. (2011). Cesiribacter andamanensis gen. nov., sp. nov., isolated from a soil sample of a mud volcano. Int J Syst Evol Microbiol 61, 1521 - 1527." title="Cesiribacter andamanensis gen. nov., sp. nov., isolated from a soil sample of a mud volcano" type="journal article" year="2011">
|
||
Srinivas
|
||
<emphasis box="[191,236,1387,1406]" italics="true" pageId="2" pageNumber="98">et al.</emphasis>
|
||
, 2011
|
||
</bibRefCitation>
|
||
); 3,
|
||
<taxonomicName box="[332,508,1388,1406]" class="Cytophagia" family="Flammeovirgaceae" genus="Marivirga" higherTaxonomySource="GBIF,CoL" kingdom="Bacteria" order="Cytophagales" pageId="2" pageNumber="98" phylum="Bacteroidetes" rank="species" species="tractuosa">
|
||
<emphasis box="[332,508,1388,1406]" italics="true" pageId="2" pageNumber="98">Marivirga tractuosa</emphasis>
|
||
</taxonomicName>
|
||
NBRC 15989T (data from
|
||
</paragraph>
|
||
<subSubSection pageId="2" pageNumber="98" type="materials_examined">
|
||
<paragraph blockId="2.[817,1453,305,1445]" pageId="2" pageNumber="98">
|
||
<materialsCitation ID-GBIF-Occurrence="1287539205" collectedFrom="desert sand" collectionCode="CCTCC" country="China" location="Xinjiang" pageId="2" pageNumber="98" specimenCode="KACC 15456" specimenCount="1" stateProvince="Xinjiang" typeStatus="type">
|
||
The
|
||
<typeStatus box="[872,917,1391,1415]" pageId="2" pageNumber="98">type</typeStatus>
|
||
strain, 311
|
||
<collectionCode box="[1052,1064,1385,1401]" pageId="2" pageNumber="98">
|
||
<collectionCodeEnum box="[1052,1064,1385,1401]" pageId="2" pageNumber="98">T</collectionCodeEnum>
|
||
</collectionCode>
|
||
(=
|
||
<collectionCode box="[1110,1196,1391,1415]" country="China" httpUri="http://grbio.org/cool/bzd1-vhw1" name="China Center for Type Culture Collection" pageId="2" pageNumber="98">CCTCC</collectionCode>
|
||
<accessionNumber box="[1210,1333,1391,1415]" httpUri="http://www.uniprot.org/uniprot/AB207142" pageId="2" pageNumber="98">AB 207142</accessionNumber>
|
||
<collectionCode box="[1334,1346,1385,1401]" pageId="2" pageNumber="98">T</collectionCode>
|
||
=
|
||
<specimenCode pageId="2" pageNumber="98">
|
||
<collectionCode box="[1382,1452,1391,1415]" country="South Korea" httpUri="http://grbio.org/cool/hdjw-ij66" name="Korean Agricultural Culture Collection" pageId="2" pageNumber="98">
|
||
<potCollectionCode box="[1382,1452,1391,1415]" pageId="2" pageNumber="98">KACC</potCollectionCode>
|
||
</collectionCode>
|
||
15456
|
||
</specimenCode>
|
||
<collectionCode box="[881,893,1415,1431]" pageId="2" pageNumber="98">T</collectionCode>
|
||
), was isolated from
|
||
<collectedFrom box="[1116,1237,1421,1445]" pageId="2" pageNumber="98">desert sand</collectedFrom>
|
||
in
|
||
<collectingRegion box="[1275,1369,1421,1445]" country="China" name="Xinjiang Uygur" pageId="2" pageNumber="98">Xinjiang</collectingRegion>
|
||
,
|
||
<collectingCountry box="[1381,1449,1421,1445]" name="China" pageId="2" pageNumber="98">China</collectingCountry>
|
||
.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
</subSubSection>
|
||
<paragraph blockId="2.[113,748,1351,1437]" box="[113,584,1417,1437]" pageId="2" pageNumber="98">this study unless indicated). ND, No data available.</paragraph>
|
||
</tableNote>
|
||
</treatment>
|
||
</document> |