171 lines
17 KiB
XML
171 lines
17 KiB
XML
<document id="1818FD3BBDA60BE8FAC9176666DDBCBC" ID-DOI="10.12651/JSR.2022.11.2.089" ID-ISSN="2713-8615" ID-Zenodo-Dep="12753308" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="carolina" IM.taxonomicNames_approvedBy="carolina" IM.treatments_approvedBy="carolina" checkinTime="1721182818068" checkinUser="felipe" docAuthor="Lee, Won Je" docDate="2022" docId="F54687D2FFB5FF908A84F8FFFB91FE7F" docLanguage="en" docName="JSpeciesRes.11.2.89-93.pdf" docOrigin="Journal of Species Research 11 (2)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Entosiphon oblongum Cavalier-Smith and Vickerman 2016" docType="treatment" docVersion="4" lastPageNumber="90" masterDocId="097FFFAAFFB4FF918A14FFACFFBEFB5A" masterDocTitle="Three newly recorded heterotrophic euglenids (Protist), Entosiphon oblongum, Euglena longa and Keelungia pulex from South Korea" masterLastPageNumber="93" masterPageNumber="89" pageNumber="90" updateTime="1721773064304" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:titleInfo id="483D3440AF0604B3A4FEB185E829D8D5">
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<mods:title id="63885A55219CCD45C79637DE3B3FE338">Three newly recorded heterotrophic euglenids (Protist), Entosiphon oblongum, Euglena longa and Keelungia pulex from South Korea</mods:title>
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<mods:name id="36E425D8EDD3636F8CF915303E9C917D" type="personal">
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<mods:roleTerm id="4533AF49721795A5C00C51BAD3D54F32">Author</mods:roleTerm>
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<mods:namePart id="73E766B4F1FDB5EFA528265B00FF2454">Lee, Won Je</mods:namePart>
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<mods:nameIdentifier id="51F34FF280DC76EBFD5A061B051C6684" type="email">wonje@kyungnam.ac.kr</mods:nameIdentifier>
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<mods:typeOfResource id="F458F8801941C87B8144259FCF6C4155">text</mods:typeOfResource>
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<mods:titleInfo id="3072043AA41182176019EBED058FFF86">
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<mods:title id="3AFEFC4D4C24F7F09F9736D0C38638F2">Journal of Species Research</mods:title>
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</mods:titleInfo>
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<mods:part id="20EB2551B7515A184D0B3F0A8206D921">
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<mods:date id="1096119AC50802F6656B19DD24ED28DC">2022</mods:date>
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<mods:detail id="D35A3B7432808BA0F40717FD4E2B7BEB" type="pubDate">
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<mods:number id="F10E58BB5BAFB8FCF118430C86F4C519">2022-05-31</mods:number>
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</mods:detail>
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<mods:detail id="5051A1725B440A13D6E064E02BAE77C8" type="volume">
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<mods:number id="7E7A242BA0F91BCEABDC4EB0FEBDCB48">11</mods:number>
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</mods:detail>
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<mods:detail id="8B5A0B52D8FCB86CD5C22237FD60FA77" type="issue">
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<mods:number id="0E1746B2EA4B1361063EB35271382876">2</mods:number>
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<mods:start id="6166874FF668CF617D7E47292C208C71">89</mods:start>
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<mods:end id="AD15487ED62746FBA041ACFA0991EAB6">93</mods:end>
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<mods:classification id="098E12DBB6B9E6201C995B9FF6A9ACB7">journal article</mods:classification>
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<mods:identifier id="0ED2EAB1680B09A99F0B5CB53F802E66" type="DOI">10.12651/JSR.2022.11.2.089</mods:identifier>
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<mods:identifier id="B21CE473421051EF85E1F7D1EEE7680E" type="ISSN">2713-8615</mods:identifier>
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<mods:identifier id="996C8DAA6A809416C6A5E8CB0086088F" type="Zenodo-Dep">12753308</mods:identifier>
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<treatment id="F54687D2FFB5FF908A84F8FFFB91FE7F" ID-DOI="http://doi.org/10.5281/zenodo.12802962" ID-Zenodo-Dep="12802962" LSID="urn:lsid:plazi:treatment:F54687D2FFB5FF908A84F8FFFB91FE7F" httpUri="http://treatment.plazi.org/id/F54687D2FFB5FF908A84F8FFFB91FE7F" lastPageNumber="90" pageId="1" pageNumber="90">
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<subSubSection id="35F5654FFFB5FF908A84F8FFFE4CFCD1" pageId="1" pageNumber="90" type="nomenclature">
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<paragraph id="7D5036C4FFB5FF908A84F8FFFD38FC31" blockId="1.[144,646,1875,1899]" box="[144,646,1875,1899]" pageId="1" pageNumber="90">
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<heading id="261881A8FFB5FF908A84F8FFFD38FC31" bold="true" box="[144,646,1875,1899]" fontSize="36" level="2" pageId="1" pageNumber="90" reason="3">
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<emphasis id="4F9BEAD6FFB5FF908A84F8FFFD38FC31" bold="true" box="[144,646,1875,1899]" pageId="1" pageNumber="90">
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1.
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<taxonomicName id="BAEF4D47FFB5FF908ABEF8FFFE21FC31" authority="Cavalier-Smith and Vickerman, 2016" authorityName="Cavalier-Smith and Vickerman" authorityYear="2016" box="[170,415,1875,1899]" class="Entosiphonea" family="Entosiphonidae" genus="Entosiphon" kingdom="Protozoa" order="Entosiphonida" pageId="1" pageNumber="90" phylum="Euglenozoa" rank="species" species="oblongum">
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<emphasis id="4F9BEAD6FFB5FF908ABEF8FFFE21FC31" bold="true" box="[170,415,1875,1899]" italics="true" pageId="1" pageNumber="90">Entosiphon oblongum</emphasis>
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</taxonomicName>
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<bibRefCitation id="197E4B35FFB5FF908BB2F8FFFD38FC31" author="Cavalier-Smith, T. & E. E. Chao & K. Vickerman" box="[422,646,1875,1899]" pageId="1" pageNumber="90" pagination="147 - 170" refId="ref2748" refString="Cavalier-Smith, T., E. E. Chao and K. Vickerman. 2016. New phagotrophic euglenoid species (new genus Decastava; Scytomonas saepesedens; Entosiphon oblongum), Hsp 90 introns, and putative euglenoid Hsp 90 pre-mRNA insertional editing. European Journal of Protistology 56: 147 - 170." type="journal article" year="2016">Cavalier-Smith and</bibRefCitation>
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</emphasis>
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||
</heading>
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||
</paragraph>
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<paragraph id="7D5036C4FFB5FF908ABEF8DFFE4CFCD1" blockId="1.[144,748,1907,1996]" box="[170,498,1907,1931]" pageId="1" pageNumber="90">
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<heading id="261881A8FFB5FF908ABEF8DFFE4CFCD1" bold="true" box="[170,498,1907,1931]" fontSize="10" level="2" pageId="1" pageNumber="90" reason="4">
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<emphasis id="4F9BEAD6FFB5FF908ABEF8DFFE4CFCD1" bold="true" box="[170,498,1907,1931]" pageId="1" pageNumber="90">Vickerman, 2016 (Figs. A -D)</emphasis>
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</heading>
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</paragraph>
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||
</subSubSection>
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<subSubSection id="35F5654FFFB5FF908A84F83FFA38FA04" pageId="1" pageNumber="90" type="materials_examined">
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<paragraph id="7D5036C4FFB5FF908A84F83FFA38FA04" blockId="1.[144,748,1907,1996]" lastBlockId="1.[809,1414,261,1317]" pageId="1" pageNumber="90">
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<emphasis id="4F9BEAD6FFB5FF908A84F83FFECFFCF1" bold="true" box="[144,369,1939,1963]" pageId="1" pageNumber="90">Material examined.</emphasis>
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<collectingCountry id="05F87654FFB5FF908B6DF838FE03FCF1" box="[377,445,1940,1963]" name="South Korea" pageId="1" pageNumber="90">Korea</collectingCountry>
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,
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<collectingRegion id="BF2BF826FFB5FF908BDEF83FFD9DFCF1" box="[458,547,1939,1963]" country="South Korea" name="Incheon" pageId="1" pageNumber="90">Incheon</collectingRegion>
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, Seo-gu, Yeonhuidong, Shimgok-chun,
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<geoCoordinate id="18DB5003FFB5FF908B91F818FD95FC91" box="[389,555,1972,1996]" degrees="37" direction="north" minutes="31" orientation="latitude" pageId="1" pageNumber="90" precision="1" seconds="37.10" value="37.526974">37°31′37.10″N</geoCoordinate>
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,
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<geoCoordinate id="18DB5003FFB5FF90882CF818FD56FC91" box="[568,744,1972,1996]" degrees="126" direction="east" minutes="39" orientation="longitude" pageId="1" pageNumber="90" precision="1" seconds="36.81" value="126.660225">126°39′36.81″E</geoCoordinate>
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,
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<materialsCitation id="CD873C99FFB5FF90893DFEA9FAC0FA04" collectingDate="2019-11-25" collectorName="Won Je Lee." country="South Korea" location="Korean Culture Collection of Protists" municipality="Kyungnam University" pageId="1" pageNumber="90" specimenCount="1" typeStatus="holotype">
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<date id="09511004FFB5FF90893DFEA9FC4BFA47" box="[809,1013,261,285]" pageId="1" pageNumber="90" value="2019-11-25">
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<collectingDate id="1915E9ECFFB5FF90893DFEA9FC4BFA47" box="[809,1013,261,285]" pageId="1" pageNumber="90" value="2019-11-25">25 November 2019</collectingDate>
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</date>
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, collected by
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<collectorName id="D01A5312FFB5FF908E90FEA9FAB8FA46" box="[1156,1286,261,284]" pageId="1" pageNumber="90">Won Je Lee.</collectorName>
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<typeStatus id="A2548866FFB5FF908F1FFEA9FA81FA47" box="[1291,1343,261,285]" pageId="1" pageNumber="90">Type</typeStatus>
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strain, live cells are kept with the
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<location id="7830601FFFB5FF908E5AFE8AFCC7FA07" LSID="urn:lsid:plazi:treatment:F54687D2FFB5FF908A84F8FFFB91FE7F:7830601FFFB5FF908E5AFE8AFCC7FA07" country="South Korea" municipality="Kyungnam University" name="Korean Culture Collection of Protists" pageId="1" pageNumber="90">Korean Culture Collection of Protists</location>
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,
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<collectingMunicipality id="9D34ACBEFFB5FF908996FEEAFBD4FA07" box="[898,1130,325,350]" pageId="1" pageNumber="90">Kyungnam University</collectingMunicipality>
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,
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<collectingCountry id="05F87654FFB5FF908E60FEEAFB08FA07" box="[1140,1206,326,349]" name="South Korea" pageId="1" pageNumber="90">Korea</collectingCountry>
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, reference ‘KF030
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</materialsCitation>
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’.
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</paragraph>
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</subSubSection>
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<subSubSection id="35F5654FFFB5FF90893DFECAFBBDF8D8" pageId="1" pageNumber="90" type="description">
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<paragraph id="7D5036C4FFB5FF90893DFECAFAA2F9BB" blockId="1.[809,1414,261,1317]" pageId="1" pageNumber="90">
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<emphasis id="4F9BEAD6FFB5FF90893DFECAFC0AFA24" bold="true" box="[809,948,358,382]" pageId="1" pageNumber="90">Description.</emphasis>
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Phagotrophs and gliding euglenid. Cells are oblong and 23.1-29.3 μm (Avg. 26.5 μm, n
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<emphasis id="4F9BEAD6FFB5FF908F1EFE2AFAA0FAC4" bold="true" box="[1290,1310,390,414]" pageId="1" pageNumber="90">=</emphasis>
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30) long. The cells are usually slightly dorso-ventrally flattened and not metabolic or plastic. Two unequal heterodynamic flagella. The anterior flagellum is about the cell length and beats actively with a sweeping motion. The thicker posterior flagellum is 1-1.5 times the cell length, is deflected posteriorly and trails along the substrate. The chiselshaped feeding siphon with two rods is moved in and out. Pellicle with several deep grooves. The cells may detach and swim with a trembling motion. The nucleus is located near the equator and to the right and is granular.
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</paragraph>
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<paragraph id="7D5036C4FFB5FF90892BFD45FBBDF8D8" blockId="1.[809,1414,261,1317]" pageId="1" pageNumber="90">
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The closest sequence retrieved by
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<collectionCode id="1BFEAE01FFB5FF908EDBFD45FAAFF85B" box="[1231,1297,745,769]" pageId="1" pageNumber="90">NCBI</collectionCode>
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<collectionCode id="1BFEAE01FFB5FF908F0FFD45FA3BF85B" box="[1307,1413,745,769]" pageId="1" pageNumber="90">BLASTN</collectionCode>
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search was that of 18S rDNA sequence of
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<taxonomicName id="BAEF4D47FFB5FF908EE8FCA6FC19F818" authority="CCAP 1220" authorityName="CCAP" authorityYear="1220" class="Entosiphonea" family="Entosiphonidae" genus="Entosiphon" kingdom="Protozoa" order="Entosiphonida" pageId="1" pageNumber="90" phylum="Euglenozoa" rank="species" species="oblongum">
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<emphasis id="4F9BEAD6FFB5FF908EE8FCA6FA3BF87B" box="[1276,1413,777,801]" italics="true" pageId="1" pageNumber="90">E. oblongum</emphasis>
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CCAP 1220
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</taxonomicName>
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/2 (accession number;
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<collectionCode id="1BFEAE01FFB5FF908E85FC85FB0DF81B" box="[1169,1203,809,833]" pageId="1" pageNumber="90">KP</collectionCode>
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306754) with a high identity of 99.83%. The 18S rDNA sequence of the stain is 1,761 bp in length.
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</paragraph>
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</subSubSection>
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<subSubSection id="35F5654FFFB5FF90893DFC27FB15FFFE" pageId="1" pageNumber="90" type="discussion">
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<paragraph id="7D5036C4FFB5FF90893DFC27FAD6FFDE" blockId="1.[809,1414,261,1317]" pageId="1" pageNumber="90">
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<emphasis id="4F9BEAD6FFB5FF90893DFC27FC20F8F9" bold="true" box="[809,926,907,931]" pageId="1" pageNumber="90">Remarks.</emphasis>
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The most similar genera are
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<taxonomicName id="BAEF4D47FFB5FF908EE1FC26FAEAF8F8" authorityName="Dujardin" authorityYear="1841" box="[1269,1364,906,930]" class="Ploeotarea" family="Ploeotiidae" genus="Ploeotia" kingdom="Protozoa" order="Ploeotiida" pageId="1" pageNumber="90" phylum="Euglenozoa" rank="genus">
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<emphasis id="4F9BEAD6FFB5FF908EE1FC26FAEAF8F8" box="[1269,1364,906,930]" italics="true" pageId="1" pageNumber="90">Ploeotia</emphasis>
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</taxonomicName>
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and
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<taxonomicName id="BAEF4D47FFB5FF90893DFC07FC7BF898" authorityName="R. E. Triemer" authorityYear="1986" box="[809,965,939,962]" class="Stavomonadea" family="Serpenomonadidae" genus="Serpenomonas" kingdom="Protozoa" order="Heterostavida" pageId="1" pageNumber="90" phylum="Euglenozoa" rank="genus">
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<emphasis id="4F9BEAD6FFB5FF90893DFC07FC7BF898" box="[809,965,939,962]" italics="true" pageId="1" pageNumber="90">Serpenomonas</emphasis>
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</taxonomicName>
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, but
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<taxonomicName id="BAEF4D47FFB5FF9089EAFC06FBC8F898" authorityName="Stein" authorityYear="1878" box="[1022,1142,938,962]" class="Entosiphonea" family="Entosiphonidae" genus="Entosiphon" kingdom="Protozoa" order="Entosiphonida" pageId="1" pageNumber="90" phylum="Euglenozoa" rank="genus">
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<emphasis id="4F9BEAD6FFB5FF9089EAFC06FBC8F898" box="[1022,1142,938,962]" italics="true" pageId="1" pageNumber="90">Entosiphon</emphasis>
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</taxonomicName>
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can be distinguished because its siphon is extensible, and because of ultrastructural differences in the construction of the feeding siphon (apparatus) and pellicle (Triemer, 1986; Triemer and Farmer, 1991). Among the genus,
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<taxonomicName id="BAEF4D47FFB5FF908E80FB80FAA5FF1E" authorityName="CCAP" authorityYear="1220" box="[1172,1307,1068,1092]" class="Entosiphonea" family="Entosiphonidae" genus="Entosiphon" kingdom="Protozoa" order="Entosiphonida" pageId="1" pageNumber="90" phylum="Euglenozoa" rank="species" species="oblongum">
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<emphasis id="4F9BEAD6FFB5FF908E80FB80FAA5FF1E" box="[1172,1307,1068,1092]" italics="true" pageId="1" pageNumber="90">E. oblongum</emphasis>
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</taxonomicName>
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is closely related to
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<taxonomicName id="BAEF4D47FFB5FF90898DFBE1FBA4FF3E" box="[921,1050,1100,1124]" class="Entosiphonea" family="Entosiphonidae" genus="Entosiphon" kingdom="Protozoa" order="Entosiphonida" pageId="1" pageNumber="90" phylum="Euglenozoa" rank="species" species="sulcatum">
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<emphasis id="4F9BEAD6FFB5FF90898DFBE1FBA4FF3E" box="[921,1050,1100,1124]" italics="true" pageId="1" pageNumber="90">E. sulcatum</emphasis>
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</taxonomicName>
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, but differing in shape and RNA and Hsp90 sequences (see
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<bibRefCitation id="197E4B35FFB5FF908E2AFBC0FAE2FFDE" author="Cavalier-Smith, T. & E. E. Chao & K. Vickerman" box="[1086,1372,1132,1156]" pageId="1" pageNumber="90" pagination="147 - 170" refId="ref2748" refString="Cavalier-Smith, T., E. E. Chao and K. Vickerman. 2016. New phagotrophic euglenoid species (new genus Decastava; Scytomonas saepesedens; Entosiphon oblongum), Hsp 90 introns, and putative euglenoid Hsp 90 pre-mRNA insertional editing. European Journal of Protistology 56: 147 - 170." type="journal article" year="2016">
|
||
Cavalier-Smith
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<emphasis id="4F9BEAD6FFB5FF908EF7FBC1FAA9FFDE" box="[1251,1303,1132,1156]" italics="true" pageId="1" pageNumber="90">et al.</emphasis>
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, 2016
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</bibRefCitation>
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).
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</paragraph>
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<paragraph id="7D5036C4FFB5FF90893DFB20FB15FFFE" blockId="1.[809,1414,261,1317]" box="[809,1195,1164,1188]" pageId="1" pageNumber="90">
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<emphasis id="4F9BEAD6FFB5FF90893DFB20FC39FFFE" bold="true" box="[809,903,1164,1188]" pageId="1" pageNumber="90">Habitat.</emphasis>
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Soil, Freshwater sediment.
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</paragraph>
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</subSubSection>
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||
<subSubSection id="35F5654FFFB5FF90893DFB01FB91FE7F" pageId="1" pageNumber="90" type="description">
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<paragraph id="7D5036C4FFB5FF90893DFB01FB37FF9E" blockId="1.[809,1414,261,1317]" box="[809,1161,1197,1221]" pageId="1" pageNumber="90">
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<emphasis id="4F9BEAD6FFB5FF90893DFB01FBB8FF9F" bold="true" box="[809,1030,1197,1221]" pageId="1" pageNumber="90">World distribution.</emphasis>
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<collectingCountry id="05F87654FFB5FF908E18FB01FB8BFF9E" box="[1036,1077,1197,1220]" name="United Kingdom" pageId="1" pageNumber="90">UK</collectingCountry>
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||
,
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<collectingCountry id="05F87654FFB5FF908E54FB01FB3BFF9E" box="[1088,1157,1197,1220]" name="South Korea" pageId="1" pageNumber="90">Korea</collectingCountry>
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.
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</paragraph>
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<paragraph id="7D5036C4FFB5FF90893DFB61FB1EFFBF" blockId="1.[809,1414,261,1317]" box="[809,1184,1229,1253]" pageId="1" pageNumber="90">
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<emphasis id="4F9BEAD6FFB5FF90893DFB61FC17FFBF" bold="true" box="[809,937,1229,1253]" pageId="1" pageNumber="90">Deposition.</emphasis>
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NIBREG0000000195.
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</paragraph>
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<paragraph id="7D5036C4FFB5FF90893DFB41FAFBFE5F" blockId="1.[809,1414,261,1317]" box="[809,1349,1261,1286]" pageId="1" pageNumber="90">
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<emphasis id="4F9BEAD6FFB5FF90893DFB41FB03FE5C" bold="true" box="[809,1213,1261,1286]" pageId="1" pageNumber="90">
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||
<collectionCode id="1BFEAE01FFB5FF90893DFB41FCD2FE5F" box="[809,876,1261,1285]" pageId="1" pageNumber="90">NCBI</collectionCode>
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GenBank Accession Number.
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</emphasis>
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<collectionCode id="1BFEAE01FFB5FF908ED7FB41FB4EFE5F" box="[1219,1264,1261,1285]" country="New Zealand" name="Otago Museum" pageId="1" pageNumber="90">OM</collectionCode>
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177657.
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</paragraph>
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<paragraph id="7D5036C4FFB5FF90893DFAA1FB91FE7F" blockId="1.[809,1414,261,1317]" box="[809,1071,1293,1317]" pageId="1" pageNumber="90">
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<emphasis id="4F9BEAD6FFB5FF90893DFAA1FC1AFE7F" bold="true" box="[809,932,1293,1317]" pageId="1" pageNumber="90">Identifiers.</emphasis>
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Won Je Lee.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |