205 lines
18 KiB
XML
205 lines
18 KiB
XML
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<mods:title id="7C642F6FF2D8EE8896AE356F1C29301E">Bosea psychrotolerans sp. nov., a psychrotrophic alphaproteobacterium isolated from Lake Michigan water</mods:title>
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<mods:namePart id="FE5EC7EE4C9722E4DAE6A83064B69A7B">Albert, Richard A.</mods:namePart>
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<mods:namePart id="B06B2CC7E43AD05E2582B9594B0A8B29">McGuine, Molly</mods:namePart>
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<mods:namePart id="EEA202800F4CE6AA7748579FBEF5A2CC">Pavlons, Shawn C.</mods:namePart>
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<mods:namePart id="08D80380A60FFFB162396A3F6699A13A">Mossman, Shane</mods:namePart>
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<mods:namePart id="AC6ED691E4D82A96C6085EF26C757957">Sun, Sona</mods:namePart>
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<mods:namePart id="A3712B6A14B755C5AAA4F0033F7D087F">King, Mike</mods:namePart>
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<mods:namePart id="FF0EF424B0D2051E81F98C7B9DA1CF0F">Hong, Sunhee</mods:namePart>
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<mods:namePart id="6766112D34E040920457EADAB1BED63B">Farrance, Christine E.</mods:namePart>
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<mods:namePart id="561406A030747A0B51197A13CA0CCA97">Danner, Joseph</mods:namePart>
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<mods:namePart id="B9AA669E6B55B0570846D7872F9323A4">Joung, Yochan</mods:namePart>
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<mods:namePart id="823570AC9ACE4F13DD33C9FE9E98D855">Shapiro, Nicole</mods:namePart>
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<mods:namePart id="96C1660A28004B902223419FE015209E">Whitman, William B.</mods:namePart>
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<mods:namePart id="B3DA130C8734FEC5CCECDCED0428C3FC">Busse, Hans-Jürgen</mods:namePart>
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<mods:title id="B30B0D77A02D3C32749872C0BD8474FE">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:date id="F52FCB9335A5600E9C70074B4A3DB5B7">2019</mods:date>
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<mods:number id="BB6427D9C77A25CDC805213E5DE4B9D1">2019-05-01</mods:number>
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<mods:number id="EF75F3DBF78D54D726DB33E928FF6F8C">69</mods:number>
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<mods:start id="3AD4392C0756DB0BEDD040B1BE808B67">1376</mods:start>
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<treatment id="E40C87EEFF3D0F06FFBAFE97FC61FE73" ID-DOI="http://doi.org/10.5281/zenodo.6314477" ID-GBIF-Taxon="193437931" ID-Zenodo-Dep="6314477" LSID="urn:lsid:plazi:treatment:E40C87EEFF3D0F06FFBAFE97FC61FE73" httpUri="http://treatment.plazi.org/id/E40C87EEFF3D0F06FFBAFE97FC61FE73" lastPageNumber="1382" pageId="6" pageNumber="1382">
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<subSubSection id="24BF6573FF3D0F06FFBAFE97FF29FBAB" pageId="6" pageNumber="1382" type="nomenclature">
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<heading id="37528194FF3D0F06FFBAFE97FF29FBAB" allCaps="true" bold="true" centered="true" fontSize="12" level="2" pageId="6" pageNumber="1382" reason="3">
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<emphasis id="5ED1EAEAFF3D0F06FFBAFE97FF29FBAB" bold="true" pageId="6" pageNumber="1382">
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DESCRIPTION OF
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<taxonomicName id="ABA54D7BFF3D0F06FEADFE97FD3AFB86" authority="Albert & McGuine & Pavlons & Roecker & Bruess & Mossman & Sun & King & Hong & Farrance & Danner & Joung & Shapiro & Whitman & Busse, 2019" authorityName="Albert & McGuine & Pavlons & Roecker & Bruess & Mossman & Sun & King & Hong & Farrance & Danner & Joung & Shapiro & Whitman & Busse" authorityYear="2019" box="[366,743,999,1028]" class="Magnoliopsida" family="Amaranthaceae" genus="Bosea" kingdom="Plantae" order="Caryophyllales" pageId="6" pageNumber="1382" phylum="Tracheophyta" rank="species" species="psychrotolerans" status="sp. nov.">
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<emphasis id="5ED1EAEAFF3D0F06FEADFE97FD3AFB86" bold="true" box="[366,743,999,1028]" italics="true" pageId="6" pageNumber="1382">BOSEA PSYCHROTOLERANS</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="45E25791FF3D0F06FFBAF97CFF29FBAB" box="[121,244,1036,1065]" pageId="6" pageNumber="1382" rank="species">SP. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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<subSubSection id="24BF6573FF3D0F06FFBAF949FE6FFB0C" pageId="6" pageNumber="1382" type="etymology">
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<paragraph id="6C1A36F8FF3D0F06FFBAF949FE6FFB0C" blockId="6.[121,759,999,1949]" pageId="6" pageNumber="1382">
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<taxonomicName id="ABA54D7BFF3D0F06FFBAF949FE82FBD2" authorityName="Albert & McGuine & Pavlons & Roecker & Bruess & Mossman & Sun & King & Hong & Farrance & Danner & Joung & Shapiro & Whitman & Busse" authorityYear="2019" box="[121,351,1080,1104]" class="Magnoliopsida" family="Amaranthaceae" genus="Bosea" kingdom="Plantae" order="Caryophyllales" pageId="6" pageNumber="1382" phylum="Tracheophyta" rank="species" species="psychrotolerans">
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<emphasis id="5ED1EAEAFF3D0F06FFBAF949FE82FBD2" box="[121,351,1080,1104]" italics="true" pageId="6" pageNumber="1382">Bosea psychrotolerans</emphasis>
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</taxonomicName>
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(psy.chro.to′ le.rans. Gr. adj.
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<emphasis id="5ED1EAEAFF3D0F06FD5AF948FD2CFBD2" box="[665,753,1080,1104]" italics="true" pageId="6" pageNumber="1382">psychros</emphasis>
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, cold; L. pres. part.
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<emphasis id="5ED1EAEAFF3D0F06FE8DF927FE7CFBED" box="[334,417,1111,1135]" italics="true" pageId="6" pageNumber="1382">tolerans</emphasis>
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, tolerating; N.L. part. adj.
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<taxonomicName id="ABA54D7BFF3D0F06FD0EF928FF27FB0C" authorityName="Albert & McGuine & Pavlons & Roecker & Bruess & Mossman & Sun & King & Hong & Farrance & Danner & Joung & Shapiro & Whitman & Busse" authorityYear="2019" class="Magnoliopsida" family="Amaranthaceae" genus="Bosea" kingdom="Plantae" order="Caryophyllales" pageId="6" pageNumber="1382" phylum="Tracheophyta" rank="species" species="psychrotolerans">
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<emphasis id="5ED1EAEAFF3D0F06FD0EF928FF27FB0C" italics="true" pageId="6" pageNumber="1382">psychrotolerans</emphasis>
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</taxonomicName>
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||
, cold-tolerating).
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||
</paragraph>
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</subSubSection>
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<subSubSection id="24BF6573FF3D0F06FFBAF9D4FC61FE73" pageId="6" pageNumber="1382" type="description">
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<paragraph id="6C1A36F8FF3D0F06FFBAF9D4FA80FF6F" blockId="6.[121,759,999,1949]" lastBlockId="6.[827,1465,182,497]" pageId="6" pageNumber="1382">
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Cells are short rods, 2–3 µm long and 0.4–0.5 µm in diameter that occur singly or in pairs and
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<taxonomicName id="ABA54D7BFF3D0F06FDD2F9B3FD7FFB58" box="[529,674,1219,1243]" form="rosettes" pageId="6" pageNumber="1382" rank="form">form rosettes</taxonomicName>
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. Gramstain-negative. Isolated colonies on PCA after 48 h incubation at 25
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<superScript id="9BD09BB0FF3D0F06FF2BF98EFF32FA8B" attach="right" box="[232,239,1278,1289]" fontSize="6" pageId="6" pageNumber="1382">Ǫ</superScript>
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C range from
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<quantity id="AB5D9B1DFF3D0F06FE4CF870FDCEFA9A" box="[399,531,1280,1304]" metricMagnitude="-4" metricUnit="m" metricValue="7.5" metricValueMax="10.0" metricValueMin="5.0" pageId="6" pageNumber="1382" unit="mm" value="0.75" valueMax="1.0" valueMin="0.5">0.5 to 1 mm</quantity>
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in diameter with an entire edge, flat and circular colony shape. Colonies have a tan colour and produce copious amount of extracellular material. Produces water soluble brown pigment when grown on PCA. The temperature growth range is 5–35
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<superScript id="9BD09BB0FF3D0F06FD14F809FD03FA06" attach="right" box="[727,734,1401,1412]" fontSize="6" pageId="6" pageNumber="1382">Ǫ</superScript>
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C, the pH growth range is 5.5 to 8.0, while the NaCl tolerance for growth was 0.0 to 1.4 % (w/v). Aerobic, motile, reduces nitrate, catalase-negative and oxidase-negative. Capsules not produced. Positive for use of
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<subScript id="F02134BDFF3D0F06FE7AF88CFE13F98C" attach="right" box="[441,462,1526,1550]" fontSize="7" pageId="6" pageNumber="1382">D-</subScript>
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glucose,
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<subScript id="F02134BDFF3D0F06FDEEF88CFD9EF98C" attach="right" box="[557,579,1526,1550]" fontSize="7" pageId="6" pageNumber="1382">D-</subScript>
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fructose, cellobiose, D- xylose, D- galactose, D- arabinose, D- ribose, sodium gluconate, Tween 20, Tween 80, sodium citrate, leucine and valine as growth substrates, but not lactose, maltose,
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<subScript id="F02134BDFF3D0F06FD65FB28FD66F9EB" attach="right" box="[678,699,1618,1641]" fontSize="7" pageId="6" pageNumber="1382">D-</subScript>
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mannitol, D- rhamnose, raffinose, D- glycerol, sucrose, trehalose, D- inositol, sodium acetate, sodium propionate, L- lysine, L- histidine and
|
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<subScript id="F02134BDFF3D0F06FEC8FBC4FEC1F944" attach="right" box="[267,284,1710,1734]" fontSize="7" pageId="6" pageNumber="1382">L-</subScript>
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threonine. Casein, starch and gelatin are not hydrolysed. The polyamine pattern contains predominantly
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<emphasis id="5ED1EAEAFF3D0F06FFBAFB9CFF7FF881" box="[121,162,1772,1795]" italics="true" pageId="6" pageNumber="1382">sym</emphasis>
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-homospermidine and ubiquinone Q-10 is the major compound in the quinone system. The polar lipid profile is composed of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine as major lipids, with moderate to minor amounts of phosphatidylmonomethylethanolamine, two unidentified aminolipids (AL1, AL2), one unidentified glycolipid (GL1) and two unidentified polar lipids (L1, L3) lacking a functional group.
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</paragraph>
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<materialsCitation id="DCCD3CA5FF3D0F06FCF8FC73FC61FE73" ID-GBIF-Occurrence="3470312301" collectionCode="LMG, NRRL" location="Lake Michigan" pageId="6" pageNumber="1382" specimenCode="LMG 30034, NRRL B- 65405" specimenCount="1" stateProvince="Wisconsin" typeStatus="holotype">
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The organism was isolated from a
|
||
<location id="697A6023FF3D0F06FB7CFC73FABCFE99" LSID="urn:lsid:plazi:treatment:E40C87EEFF3D0F06FFBAFE97FC61FE73:697A6023FF3D0F06FB7CFC73FABCFE99" box="[1215,1377,259,283]" name="Lake Michigan" pageId="6" pageNumber="1382" stateProvince="Wisconsin">Lake Michigan</location>
|
||
potable water sample in south-eastern
|
||
<collectingRegion id="AE61F81AFF3D0F06FB6EFC52FAFDFEB8" box="[1197,1312,290,314]" country="United States of America" name="Wisconsin" pageId="6" pageNumber="1382">Wisconsin</collectingRegion>
|
||
. Type strain 1131
|
||
<superScript id="9BD09BB0FF3D0F06FCADFC4AFCA7FEC9" attach="left" box="[878,890,314,331]" fontSize="7" pageId="6" pageNumber="1382">T</superScript>
|
||
has been deposited as
|
||
<specimenCode id="3C039E83FF3D0F06FBBAFC31FB26FEDB" box="[1145,1275,321,345]" pageId="6" pageNumber="1382">LMG 30034</specimenCode>
|
||
and as
|
||
<specimenCode id="3C039E83FF3D0F06FA97FC31FCA0FEF5" pageId="6" pageNumber="1382">NRRL B- 65405</specimenCode>
|
||
. The GenBank accession number for the 16S rRNA gene sequence of strain 1131
|
||
<superScript id="9BD09BB0FF3D0F06FBB2FC07FBA0FE0A" attach="left" box="[1137,1149,375,392]" fontSize="7" pageId="6" pageNumber="1382">T</superScript>
|
||
is
|
||
<accessionNumber id="73F6AB1BFF3D0F06FB5CFC0EFAC4FE14" box="[1183,1305,382,406]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MG687375" pageId="6" pageNumber="1382">MG687375</accessionNumber>
|
||
. The GenBank accession number for the entire genome of strain 1131
|
||
<superScript id="9BD09BB0FF3D0F06FA50FCE6FA42FE25" attach="left" box="[1427,1439,406,423]" fontSize="7" pageId="6" pageNumber="1382">T</superScript>
|
||
is PQFZ00000000. The DNA G+C content of strain 1131
|
||
<superScript id="9BD09BB0FF3D0F06FA50FCC5FA42FE44" attach="right" box="[1427,1439,437,454]" fontSize="7" pageId="6" pageNumber="1382">T</superScript>
|
||
is 66.65 mol%.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |