148 lines
15 KiB
XML
148 lines
15 KiB
XML
<document id="C9215859C57793BE0AC9026210D3293C" ID-CLB-Dataset="30385" ID-DOI="http://dx.doi.org/10.3897/mycokeys.33.23670" ID-GBIF-Dataset="42cbc858-8729-4618-9467-590ea7ca068e" ID-PMC="PMC6283267" ID-Pensoft-Pub="1314-4049-33-25" ID-PubMed="30532625" ModsDocAuthor="" ModsDocDate="2018" ModsDocID="1314-4049-33-25" ModsDocOrigin="MycoKeys 33" ModsDocTitle="Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand" checkinTime="1522305991188" checkinUser="pensoft" docAuthor="Tibpromma, Saowaluck, Hyde, Kevin D., Bhat, Jayarama D., Mortimer, Peter E., Xu, Jianchu, Promputtha, Itthayakorn, Doilom, Mingkwan, Yang, Jun-Bo, Tang, Alvin M. C. & Karunarathna, Samantha C." docDate="2018" docId="BA9AEDC79184D45125D0927D07DDC3EC" docLanguage="en" docName="MycoKeys 33: 25-67" docOrigin="MycoKeys 33" docSource="http://dx.doi.org/10.3897/mycokeys.33.23670" docTitle="Mycelium Corda 1842" docType="treatment" docVersion="8" lastPageNumber="47" masterDocId="B85B6F41CC50A742FFD77F5B3B598C43" masterDocTitle="Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand" masterLastPageNumber="67" masterPageNumber="25" pageNumber="47" updateTime="1732677854369" updateUser="ExternalLinkService">
|
|
<mods:mods id="5A1BC9F68F719DEFB4A91706E5198DD1" xmlns:mods="http://www.loc.gov/mods/v3">
|
|
<mods:titleInfo id="435CDE901925B74CDA666FA8AC019AE4">
|
|
<mods:title id="055F2708FD25B3EAF72C271BADAE3375">Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand</mods:title>
|
|
</mods:titleInfo>
|
|
<mods:name id="D743987C876022C738B93AA13496D19C" type="personal">
|
|
<mods:role id="88F201A9A2C0057A0498FDD1D20DB343">
|
|
<mods:roleTerm id="273FEEA6A0A33AA38DDE504489D25CFB">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="3368C7EB89431E5DAA7EFF1E3A3CA849">Tibpromma, Saowaluck</mods:namePart>
|
|
</mods:name>
|
|
<mods:name id="34B8E5D0BB4B4A2F209C2CC6E2001D10" type="personal">
|
|
<mods:role id="C84C85FF602C4C44956ED159D7A6E7F4">
|
|
<mods:roleTerm id="182B0C85A1F8A3E9208A66B4A22A59E8">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="D02BBE6E9ECC4F9347B49B1BE5677F2A">Hyde, Kevin D.</mods:namePart>
|
|
</mods:name>
|
|
<mods:name id="3C663032CD18BEF3D09375D7C03A067A" type="personal">
|
|
<mods:role id="3A2EF64BE34B09CF66D9B15D0D886343">
|
|
<mods:roleTerm id="09C4C2BE5CAAE2B48EC32ECF3490CFF3">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="DC47FE746466DAACBD024EDF983297E5">Bhat, Jayarama D.</mods:namePart>
|
|
</mods:name>
|
|
<mods:name id="2E8E19A747333194B672AC7F4012DA65" type="personal">
|
|
<mods:role id="9EFB42CA8AE39CBD8B262DCF09D0CACF">
|
|
<mods:roleTerm id="F166EFA372EA23E499BFA0388BA54BDB">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="61B5A87F07B072CB090B1CB5D52BA678">Mortimer, Peter E.</mods:namePart>
|
|
</mods:name>
|
|
<mods:name id="3AC7D1C7AE18C3E10F5C41A3662506D9" type="personal">
|
|
<mods:role id="E4B4C453FBBCD6D03024E7A406795C9F">
|
|
<mods:roleTerm id="429F6132BBA53BE451B35775A5CB3532">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="458A71E706889B952E3B2EB10C5929B8">Xu, Jianchu</mods:namePart>
|
|
</mods:name>
|
|
<mods:name id="0EF49236E8E287B12C5C11EBF207844A" type="personal">
|
|
<mods:role id="DB2E15095062D1F11CF402A603CBD240">
|
|
<mods:roleTerm id="30A8520DE18559EBB4E8AFFB7AD333C1">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="7EAA0E08E55CC2B5DB2161052C1D5AF3">Promputtha, Itthayakorn</mods:namePart>
|
|
</mods:name>
|
|
<mods:name id="6B433C0EB6D386AC0BFF285D62705772" type="personal">
|
|
<mods:role id="8D4E2A0EF5F46E2F24EAE84567C27CE7">
|
|
<mods:roleTerm id="34E147684F058440E3D44F445EA3EDEA">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="31881878D270425E47CB5D55EF28968D">Doilom, Mingkwan</mods:namePart>
|
|
</mods:name>
|
|
<mods:name id="3B24965AB1DDD308C8ED31EC5661AC33" type="personal">
|
|
<mods:role id="BF422E38B5EDF8C00F64DB6A9A791A93">
|
|
<mods:roleTerm id="5A49CFFBE7725D7A6A39A0DE00E6A00C">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="30DD0036B626CCCBC81EC7066759BDAA">Yang, Jun-Bo</mods:namePart>
|
|
</mods:name>
|
|
<mods:name id="B344AD7E5E2C214D5D852206CB53097F" type="personal">
|
|
<mods:role id="11BB9DBB6CEA7C0574A5DD4C1F91E431">
|
|
<mods:roleTerm id="CDFAA3F90CFBB2C21D3BC38089AF0CE1">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="636173DA304CC0C39331F89145B110C8">Tang, Alvin M. C.</mods:namePart>
|
|
</mods:name>
|
|
<mods:name id="F487D3B3C6B56B183C77882EB8621E33" type="personal">
|
|
<mods:role id="4A2722E2EE7D388C0FAD633BACA354BC">
|
|
<mods:roleTerm id="34A0A5FA73B853190E796719532746E4">Author</mods:roleTerm>
|
|
</mods:role>
|
|
<mods:namePart id="8E86CECE0266E71C3FA6D1D55F360366">Karunarathna, Samantha C.</mods:namePart>
|
|
</mods:name>
|
|
<mods:typeOfResource id="B402C27226B61ADA3E5B1687866EA6FD">text</mods:typeOfResource>
|
|
<mods:relatedItem id="3FEDB3BF95EDC71105165D78BC9F2960" type="host">
|
|
<mods:titleInfo id="44F744F441B6AF93142C1BE4C036D2AF">
|
|
<mods:title id="0635077866F4193975041768EEE288A6">MycoKeys</mods:title>
|
|
</mods:titleInfo>
|
|
<mods:part id="67F35CE8204B409F644FD967E552ED3F">
|
|
<mods:date id="EEA470DD040663819EED0F04203F1A9B">2018</mods:date>
|
|
<mods:detail id="2741BF29FC00C4A1663D927BB02EA261" type="volume">
|
|
<mods:number id="C1849E73D5BF508F5212E2ED148858EC">33</mods:number>
|
|
</mods:detail>
|
|
<mods:extent id="79C09369FFF24FCAEF8E9FEF7E015EED" unit="page">
|
|
<mods:start id="2D4EC4F089E1E0FAFD8A36760B6ECE60">25</mods:start>
|
|
<mods:end id="19C2C61AC0A7CC4AD0604CE60F7469FE">67</mods:end>
|
|
</mods:extent>
|
|
</mods:part>
|
|
</mods:relatedItem>
|
|
<mods:location id="546F0EBCB5249F280833A45F10C3B082">
|
|
<mods:url id="FCECE7E08D12E5DB4E0C159401BBBF71">http://dx.doi.org/10.3897/mycokeys.33.23670</mods:url>
|
|
</mods:location>
|
|
<mods:classification id="8A94458BC0B0C6CF3D6E07C61FB08339">journal article</mods:classification>
|
|
<mods:identifier id="DA3B037C4DD03977F92F40AF052ACCCF" type="DOI">http://dx.doi.org/10.3897/mycokeys.33.23670</mods:identifier>
|
|
<mods:identifier id="4E983EE6785A91202BB9346ABDDC073A" type="Pensoft-Pub">1314-4049-33-25</mods:identifier>
|
|
</mods:mods>
|
|
<treatment id="BA9AEDC79184D45125D0927D07DDC3EC" ID-GBIF-Taxon="142664155" LSID="urn:lsid:plazi:treatment:BA9AEDC79184D45125D0927D07DDC3EC" httpUri="http://treatment.plazi.org/id/BA9AEDC79184D45125D0927D07DDC3EC" lastPageNumber="47" pageId="22" pageNumber="47" scope_order="Diaporthales" scope_phylum="Ascomycota">
|
|
<subSubSection id="434E6EE8F8607E449B09FE350EAF672E" pageId="22" pageNumber="47" type="nomenclature">
|
|
<paragraph id="958D2C0A1107B15529EF79A405D4116F" pageId="22" pageNumber="47">
|
|
<taxonomicName id="C8F702B4C508F27B6ACF881C75D96503" authority="Corda, 1842" authorityName="Corda" authorityYear="1842" class="Sordariomycetes" family="Sporocadaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Xylariales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="family">Sporocadaceae Corda, 1842</taxonomicName>
|
|
</paragraph>
|
|
</subSubSection>
|
|
<subSubSection id="FB73621C357AB73FCDFF4AD8C105B231" pageId="22" pageNumber="47" type="remarks">
|
|
<paragraph id="F1BEC87714E84B50C6FBD175816B088E" pageId="22" pageNumber="47">Remarks.</paragraph>
|
|
<paragraph id="5D8837AE629598612D3CBFE95186510B" pageId="22" pageNumber="47">
|
|
<taxonomicName id="036EBB347E285187CC6162920DCEC34C" genus="Sporocadaceae" lsidName="Sporocadaceae" pageId="22" pageNumber="47" rank="genus">Sporocadaceae</taxonomicName>
|
|
was introduced by Corda (1842) with
|
|
<taxonomicName id="8E89A2EF5717941CF7497AA8169AEE59" class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Pestalotiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pestalotiopsis" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Pestalotiopsis</taxonomicName>
|
|
-like asexual morphs and confirmed by
|
|
<bibRefCitation id="B1C55D276A8714898B6A116B30530A6D" author="Senanayake, IC" journalOrPublisher="Fungal Diversity" pageId="35" pageNumber="60" pagination="73 - 144" title="Towards unraveling relationships in Xylariomycetidae (Sordariomycetes)." url="https://doi.org/10.1007/s13225-015-0340-y" volume="73" year="2015">Senanayake et al. (2015)</bibRefCitation>
|
|
. Members of
|
|
<taxonomicName id="DFFD143320556965C0668D78D2155549" genus="Sporocadaceae" lsidName="Sporocadaceae" pageId="22" pageNumber="47" rank="genus">Sporocadaceae</taxonomicName>
|
|
are saprobes, endophytes or foliar pathogens in tropical and temperate regions (
|
|
<bibRefCitation id="3B788790BA38397F1BFB1CC2585D63E8" author="Jeewon, R" journalOrPublisher="Fungal Diversity" pageId="31" pageNumber="56" pagination="39 - 55" title="Phylogenetic evaluation of species nomenclature of Pestalotiopsis in relation to host association." volume="17" year="2004">Jeewon et al. 2004</bibRefCitation>
|
|
;
|
|
<bibRefCitation id="3D0684903423A57CEC2617EF326C4697" author="Tanaka, K" journalOrPublisher="Persoonia" pageId="35" pageNumber="60" pagination="85 - 98" title="Phylogeny of Discosia and Seimatosporium, and introduction of Adisciso and Immersidiscosia genera nova." url="https://doi.org/10.3767/003158511X576666" volume="26" year="2011">Tanaka et al. 2011</bibRefCitation>
|
|
).
|
|
<taxonomicName id="EFAF13AF6853857C79608B4FE612F8ED" class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Pestalotiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pestalotiopsis" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Pestalotiopsis</taxonomicName>
|
|
can be found as saprobes or pathogens worldwide (
|
|
<bibRefCitation id="4BA59993C51AF7B65028DD6715119308" author="Jeewon, R" journalOrPublisher="Molecular Phylogenetics and Evolution" pageId="30" pageNumber="55" pagination="378 - 392" title="Phylogenetic relationships of Pestalotiopsis and allied genera inferred from ribosomal DNA sequences and morphological characters." url="https://doi.org/10.1016/S1055-7903(02)00422-0" volume="25" year="2002">Jeewon et al. 2002</bibRefCitation>
|
|
,
|
|
<bibRefCitation id="BFD2800B2EB85C308C3DFE487E7C9C84" author="Jeewon, R" journalOrPublisher="Molecular Phylogenetics and Evolution" pageId="31" pageNumber="56" pagination="372 - 383" title="Phylogenetic significance of morphological characters in the taxonomy of Pestalotiopsis species." url="https://doi.org/10.1016/S1055-7903(03)00010-1" volume="27" year="2003">2003</bibRefCitation>
|
|
;
|
|
<bibRefCitation id="0B102B198CBD08AAAE0044346A462142" author="Maharachchikumbura, SSN" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="167 - 187" title="Pestalotiopsis-morphology, phylogeny, biochemistry and diversity." url="https://doi.org/10.1007/s13225-011-0125-x" volume="50" year="2011">Maharachchikumbura et al. 2011</bibRefCitation>
|
|
,
|
|
<bibRefCitation id="13A6ABE8CE62FA4ABB2863F2963A736E" author="Maharachchikumbura, SSN" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="95 - 129" title="A multi-locus backbone tree for Pestalotiopsis, with a polyphasic characterization of 14 new species." url="https://doi.org/10.1007/s13225-012-0198-1" volume="56" year="2012">2012</bibRefCitation>
|
|
,
|
|
<bibRefCitation id="29D98C06EE4846A83F6CF615F004D5E8" author="Maharachchikumbura, SSN" journalOrPublisher="Tropical Plant Pathology" pageId="32" pageNumber="57" pagination="227 - 235" title="A destructive new disease of Syzygiumsamarangense in Thailand caused by the new species Pestalotiopsissamarangensis." url="http://dx.doi.org/10.1590/S1982-56762013005000002" volume="38" year="2013">2013</bibRefCitation>
|
|
,
|
|
<bibRefCitation id="CA5259A4E7214B982B51CEB5C2EC753A" author="Maharachchikumbura, SSN" journalOrPublisher="Mycological Progress" pageId="32" pageNumber="57" pagination="617 - 624" title="Improving the backbone tree for the genus Pestalotiopsis; addition of P. steyaertii and P. magna sp. nov." url="https://doi.org/10.1007/s11557-013-0944-0" volume="13" year="2014 a">2014a</bibRefCitation>
|
|
,
|
|
<bibRefCitation id="FC91000B71B8BA7B3D83F3DF0561B674" author="Maharachchikumbura, SSN" journalOrPublisher="Studies in Mycology" pageId="32" pageNumber="57" pagination="121 - 186" title="Pestalotiopsis revisited." url="https://doi.org/10.1016/j.simyco.2014.09.005" volume="79" year="2014 b">b</bibRefCitation>
|
|
,
|
|
<bibRefCitation id="7A78613F894543F3C3CD47B163594102" author="Maharachchikumbura, SSN" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" url="https://doi.org/10.1007/s11557-016-1162-3" year="2016 a">2016a</bibRefCitation>
|
|
,
|
|
<bibRefCitation id="0DECE5D8F319E914C0A23B2FE28B6878" author="Maharachchikumbura, SSN" journalOrPublisher="Phytopathologia Mediterranea" pageId="33" pageNumber="58" pagination="380 - 390" title="Characterization of Neopestalotiopsis, Pestalotiopsis and Truncatella species associated with grapevine trunk diseases in France." url="http://dx.doi.org/10.14601/Phytopathol_Mediterr-18298" volume="55" year="2016 c">c</bibRefCitation>
|
|
). Recently,
|
|
<bibRefCitation id="D17FF816469B370BC2361ECF3D71DB4C" author="Chen, YY" journalOrPublisher="Mycosphere" pageId="27" pageNumber="52" pagination="103 - 110" title="Fungi from Asian Karst formations I. Pestalotiopsisphotinicola sp. nov., causing leaf spots of Photiniaserrulata." url="https://doi.org/10.5943/mycosphere/8/1/9" volume="8" year="2017">Chen et al. (2017)</bibRefCitation>
|
|
provided updates for this genus based on morphology and phylogeny. In this study, two known species of
|
|
<taxonomicName id="413E9F1E329CF232F82EE5AF5229BB88" class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Pestalotiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pestalotiopsis" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Pestalotiopsis</taxonomicName>
|
|
from
|
|
<taxonomicName id="B9F1459C79B54C0EC747B5611FB17024" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="22" pageNumber="47" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
|
hosts were isolated.
|
|
</paragraph>
|
|
<caption id="0803AD2AD5319C0346898DEBBAC1BBA1" pageId="22" pageNumber="47">
|
|
<paragraph id="5690629BDB79C30444AD527630594B7A" pageId="22" pageNumber="47">
|
|
Figure 18. Phylogram generated from maximum likelihood analysis based on the combination of ITS,
|
|
<normalizedToken id="B1A12AB388280DBE4C0B3A0B7D899C2F" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
|
and TEF1 sequenced data. Maximum parsimony bootstrap is given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with
|
|
<taxonomicName id="197B32C064552C3BAABF5ADD8F7C0914" class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Seiridium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Seiridium camelliae" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="camelliae">Seiridium camelliae</taxonomicName>
|
|
.
|
|
</paragraph>
|
|
</caption>
|
|
</subSubSection>
|
|
</treatment>
|
|
</document> |