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<mods:title id="22F67E514446206688EFC2282CE6B2FD">Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand</mods:title>
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<mods:namePart>Tibpromma, Saowaluck</mods:namePart>
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<mods:namePart>Hyde, Kevin D.</mods:namePart>
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<mods:namePart>Bhat, Jayarama D.</mods:namePart>
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<mods:namePart>Mortimer, Peter E.</mods:namePart>
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<mods:namePart>Xu, Jianchu</mods:namePart>
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<mods:namePart>Promputtha, Itthayakorn</mods:namePart>
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<mods:namePart>Doilom, Mingkwan</mods:namePart>
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<mods:namePart>Yang, Jun-Bo</mods:namePart>
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<mods:namePart>Tang, Alvin M. C.</mods:namePart>
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<mods:namePart>Karunarathna, Samantha C.</mods:namePart>
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<mods:date>2018</mods:date>
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<mods:number id="187298329C5276545C611F0B942C4E7A">33</mods:number>
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<treatment ID-GBIF-Taxon="142664223" LSID="urn:lsid:plazi:treatment:228C9EAC5B93863451543FDC0C05938E" httpUri="http://treatment.plazi.org/id/228C9EAC5B93863451543FDC0C05938E" lastPageNumber="35" pageId="10" pageNumber="35">
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<taxonomicName authority="Pat.) Griffon & Maubl., Bull. Soc. Mycol. Fr. 25: 57 (1909" authorityYear="1909" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae (Pat.) Griffon & Maubl., Bull. Soc. Mycol. Fr. 25: 57 (1909)</taxonomicName>
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<treatment id="228C9EAC5B93863451543FDC0C05938E" ID-GBIF-Taxon="142664223" LSID="urn:lsid:plazi:treatment:228C9EAC5B93863451543FDC0C05938E" httpUri="http://treatment.plazi.org/id/228C9EAC5B93863451543FDC0C05938E" lastPageNumber="35" pageId="10" pageNumber="35" scope_order="Botryosphaeriales" scope_phylum="Ascomycota">
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<subSubSection id="631E274CAD71D2446B9C713614B12C23" pageId="10" pageNumber="35" type="nomenclature">
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<paragraph id="21C883A5CB1C7C381DC6B5B634D5C162" pageId="10" pageNumber="35">
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<taxonomicName id="1C9E49E42C3643CC7D6E425822D064C8" ID-CoL="3SDJV" authority="Pat.) Griffon & Maubl., Bull. Soc. Mycol. Fr. 25: 57 (1909" authorityYear="1909" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae (Pat.) Griffon & Maubl., Bull. Soc. Mycol. Fr. 25: 57 (1909)</taxonomicName>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="10" pageNumber="35" type="description">
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<paragraph pageId="10" pageNumber="35">Culture characteristics.</paragraph>
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<paragraph pageId="10" pageNumber="35">
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<taxonomicName genus="Colonies" lsidName="Colonies" pageId="10" pageNumber="35" rank="genus">Colonies</taxonomicName>
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<subSubSection id="3FD59B6F2B1C4706D81DFB6E3DD23228" pageId="10" pageNumber="35" type="description">
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<paragraph id="ACC099CCFC9C7F50A32BA352E7DF3BE8" pageId="10" pageNumber="35">Culture characteristics.</paragraph>
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<paragraph id="9B1EE02787E7E3796F764B588222CCEE" pageId="10" pageNumber="35">
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<taxonomicName id="8C10D94018CE98AFA3C2316815A8E297" genus="Colonies" lsidName="Colonies" pageId="10" pageNumber="35" rank="genus">Colonies</taxonomicName>
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on PDA (Figure 2, PE25), superficial, initially white with flat mycelium on media, later becoming dark, circular, flossy and velvety; reverse dark. Not sporulating in culture.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="10" pageNumber="35" type="genbank numbers">
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<paragraph pageId="10" pageNumber="35">GenBank numbers.</paragraph>
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<paragraph pageId="10" pageNumber="35">ITS=MG646970, LSU=MG646945, SSU=MG646976, TEF1=MG646984.</paragraph>
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<subSubSection id="091A9C3CEEBF3CB3D210BECA4CB94638" pageId="10" pageNumber="35" type="genbank numbers">
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<paragraph id="98A55AF14F6368D60D3F7B238EFECDF7" pageId="10" pageNumber="35">GenBank numbers.</paragraph>
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<paragraph id="2BBBE2B1D4416B4643333CB196F8DC29" pageId="10" pageNumber="35">ITS=MG646970, LSU=MG646945, SSU=MG646976, TEF1=MG646984.</paragraph>
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</subSubSection>
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<subSubSection pageId="10" pageNumber="35" type="notes">
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<paragraph pageId="10" pageNumber="35">Notes.</paragraph>
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<paragraph pageId="10" pageNumber="35">
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<subSubSection id="CCDC6D853D5F45E2597E1BE9214A620C" pageId="10" pageNumber="35" type="notes">
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<paragraph id="92435DEE2972D65166C6F56276833394" pageId="10" pageNumber="35">Notes.</paragraph>
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<paragraph id="07B8AE693CC351E33A77425C647A41ED" pageId="10" pageNumber="35">
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Morphological and phylogenetic data supported placement of this isolate as
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<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae</taxonomicName>
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<taxonomicName id="E76D9831F457B7E182155AF69A8EA6DE" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae</taxonomicName>
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. The phylogenetic analysis showed the isolate groups with
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<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae</taxonomicName>
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<taxonomicName id="6726420A89FA80893A321D30B1C27F2A" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae</taxonomicName>
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. Nucleotide base pairs of published sequences of
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<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae</taxonomicName>
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<taxonomicName id="1DFD87801B821FE304AF461FBFD151D5" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae</taxonomicName>
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(strain EucN188, CBS 111530, PHLO9, CDFA145) were also compared with the sequence and found that the nucleotide base pairs of the ITS gene are 100% similar.
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</paragraph>
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</subSubSection>
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@ -1,143 +1,143 @@
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<treatment ID-GBIF-Taxon="142664172" LSID="urn:lsid:plazi:treatment:2F86123038A230E900659B0DE109B63E" httpUri="http://treatment.plazi.org/id/2F86123038A230E900659B0DE109B63E" lastPageId="18" lastPageNumber="42" pageId="17" pageNumber="42">
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<taxonomicName authority="Locq. ex Seifert & W. Gams, in Zhang et al. (2007)" family="Glomerellaceae" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Mycelium" order="Glomerellales" pageId="17" pageNumber="42" rank="family">Glomerellaceae Locq. ex Seifert & W. Gams, in Zhang et al. (2007)</taxonomicName>
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<treatment id="2F86123038A230E900659B0DE109B63E" ID-GBIF-Taxon="142664172" LSID="urn:lsid:plazi:treatment:2F86123038A230E900659B0DE109B63E" httpUri="http://treatment.plazi.org/id/2F86123038A230E900659B0DE109B63E" lastPageId="18" lastPageNumber="42" pageId="17" pageNumber="42" scope_order="Diaporthales" scope_phylum="Ascomycota">
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<subSubSection id="9E13822C74B523A23EFF276076F4FCBF" pageId="17" pageNumber="42" type="nomenclature">
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<paragraph id="88ED11AE4F26BB31AFFF7EA9AED8E40A" pageId="17" pageNumber="42">
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<taxonomicName id="25A09DE09ACC5ED69C379867F449A60F" ID-CoL="623J5" ID-ENA="681950" authority="Locq. ex Seifert & W. Gams, in Zhang et al. (2007)" class="Sordariomycetes" family="Glomerellaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Glomerellales" pageId="17" pageNumber="42" phylum="Ascomycota" rank="family">Glomerellaceae Locq. ex Seifert & W. Gams, in Zhang et al. (2007)</taxonomicName>
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</paragraph>
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</subSubSection>
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<subSubSection lastPageId="18" lastPageNumber="43" pageId="17" pageNumber="42" type="remarks">
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<paragraph pageId="17" pageNumber="42">Remarks.</paragraph>
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<subSubSection id="16C880C32DF86005D254283FA4C8B42B" lastPageId="18" lastPageNumber="43" pageId="17" pageNumber="42" type="remarks">
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<paragraph id="4D4827B8E4FF8083E9F30D5060BA41C4" pageId="17" pageNumber="42">Remarks.</paragraph>
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<paragraph id="96339AFF5643DF3F33729DC60651D7C6" lastPageId="18" lastPageNumber="43" pageId="17" pageNumber="42">
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The family
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<taxonomicName genus="Glomerellaceae" lsidName="Glomerellaceae" pageId="17" pageNumber="42" rank="genus">Glomerellaceae</taxonomicName>
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<taxonomicName id="509A7EF6F8238512761791145104C5B9" genus="Glomerellaceae" lsidName="Glomerellaceae" pageId="17" pageNumber="42" rank="genus">Glomerellaceae</taxonomicName>
|
||||
was introduced by Locquin (1984), but was invalidly published. To date, most
|
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<taxonomicName genus="Glomerellaceae" lsidName="Glomerellaceae" pageId="17" pageNumber="42" rank="genus">Glomerellaceae</taxonomicName>
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<taxonomicName id="7963118D56444116A04D5520C65FACD8" genus="Glomerellaceae" lsidName="Glomerellaceae" pageId="17" pageNumber="42" rank="genus">Glomerellaceae</taxonomicName>
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have been recorded to be pathogens (
|
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<bibRefCitation author="Maharachchikumbura, SS" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" pagination="1 - 317" title="Families of Sordariomycetes." url="https://doi.org/10.1007/s13225-016-0369-6" volume="79" year="2016 b">Maharachchikumbura et al. 2016b</bibRefCitation>
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<bibRefCitation id="53C78161DC039394A21ECA2845066EC4" author="Maharachchikumbura, SS" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" pagination="1 - 317" title="Families of Sordariomycetes." url="https://doi.org/10.1007/s13225-016-0369-6" volume="79" year="2016 b">Maharachchikumbura et al. 2016b</bibRefCitation>
|
||||
). Earlier studies reported that the position of the family
|
||||
<taxonomicName genus="Glomerellaceae" lsidName="Glomerellaceae" pageId="17" pageNumber="42" rank="genus">Glomerellaceae</taxonomicName>
|
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<taxonomicName id="151823828B18E780F0F732699756F58E" genus="Glomerellaceae" lsidName="Glomerellaceae" pageId="17" pageNumber="42" rank="genus">Glomerellaceae</taxonomicName>
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was not stable (
|
||||
<bibRefCitation author="Zhang, N" journalOrPublisher="Mycologia" pageId="38" pageNumber="63" pagination="1076 - 1087" title="An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny." url="https://doi.org/10.1080/15572536.2006.11832635" volume="98" year="2006">Zhang et al. 2006</bibRefCitation>
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<bibRefCitation id="150CB749B42497CF3AC4B6B83B499436" author="Zhang, N" journalOrPublisher="Mycologia" pageId="38" pageNumber="63" pagination="1076 - 1087" title="An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny." url="https://doi.org/10.1080/15572536.2006.11832635" volume="98" year="2006">Zhang et al. 2006</bibRefCitation>
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;
|
||||
<bibRefCitation pageId="17" pageNumber="42">Kirk et al. 2001</bibRefCitation>
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||||
<bibRefCitation id="72F9F05B48DAE0ED6747C7C0A04050FA" pageId="17" pageNumber="42">Kirk et al. 2001</bibRefCitation>
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;
|
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<bibRefCitation pageId="17" pageNumber="42">Kirk et al. 2008</bibRefCitation>
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<bibRefCitation id="4B9EAF0EE5E180F2D2F1FD1E4B81A4D6" pageId="17" pageNumber="42">Kirk et al. 2008</bibRefCitation>
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).
|
||||
<bibRefCitation author="Reblova, M" journalOrPublisher="Studies in Mycology" pageId="34" pageNumber="59" pagination="163 - 191" title="Monilochaetes and allied genera of the Glomerellales, and a reconsideration of families in the Microascales." url="https://doi.org/10.3114/sim.2011.68.07" volume="68" year="2011">
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<normalizedToken originalValue="Réblová">Reblova</normalizedToken>
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<bibRefCitation id="FAFA5DEA17F9091E87F99FE738F6682E" author="Reblova, M" journalOrPublisher="Studies in Mycology" pageId="34" pageNumber="59" pagination="163 - 191" title="Monilochaetes and allied genera of the Glomerellales, and a reconsideration of families in the Microascales." url="https://doi.org/10.3114/sim.2011.68.07" volume="68" year="2011">
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<normalizedToken id="608B435DDAEB975427AD58BECB2DF64D" originalValue="Réblová">Reblova</normalizedToken>
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et al. (2011)
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||||
</bibRefCitation>
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||||
resolved the placement of
|
||||
<taxonomicName genus="Glomerellaceae" lsidName="Glomerellaceae" pageId="17" pageNumber="42" rank="genus">Glomerellaceae</taxonomicName>
|
||||
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||||
by using phylogenetic analysis of combined ITS, LSU, SSU and RPB2 sequence data. Recently, the family
|
||||
<taxonomicName genus="Glomerellaceae" lsidName="Glomerellaceae" pageId="17" pageNumber="42" rank="genus">Glomerellaceae</taxonomicName>
|
||||
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|
||||
was established based on the genus
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<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Glomerella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Glomerella" order="Glomerellales" pageId="17" pageNumber="42" phylum="Ascomycota" rank="genus">Glomerella</taxonomicName>
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<taxonomicName id="4E0B53D7143939D6D867A641C9CA7C52" class="Sordariomycetes" family="Glomerellaceae" genus="Glomerella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Glomerella" order="Glomerellales" pageId="17" pageNumber="42" phylum="Ascomycota" rank="genus">Glomerella</taxonomicName>
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(
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<bibRefCitation author="Zhang, N" journalOrPublisher="Mycologia" pageId="38" pageNumber="63" pagination="1076 - 1087" title="An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny." url="https://doi.org/10.1080/15572536.2006.11832635" volume="98" year="2006">Zhang et al. 2006</bibRefCitation>
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<bibRefCitation id="3C7AD583785EF5D1EE62E14C748EC6DF" author="Zhang, N" journalOrPublisher="Mycologia" pageId="38" pageNumber="63" pagination="1076 - 1087" title="An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny." url="https://doi.org/10.1080/15572536.2006.11832635" volume="98" year="2006">Zhang et al. 2006</bibRefCitation>
|
||||
), which had been given a synonym under its asexual morph
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Glomerellales" pageId="17" pageNumber="42" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
|
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<taxonomicName id="224F6596657D4C9C2F414D9BE1223006" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Glomerellales" pageId="17" pageNumber="42" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
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(
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<bibRefCitation author="Maharachchikumbura, SS" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" pagination="199 - 301" title="Towards a natural classification and backbone tree for Sordariomycetes." url="https://doi.org/10.1007/s13225-015-0331-z" volume="72" year="2015">Maharachchikumbura et al. 2015</bibRefCitation>
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<bibRefCitation id="DC11DBF5CA021B73A9A70C2651C9B1EA" author="Maharachchikumbura, SS" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" pagination="199 - 301" title="Towards a natural classification and backbone tree for Sordariomycetes." url="https://doi.org/10.1007/s13225-015-0331-z" volume="72" year="2015">Maharachchikumbura et al. 2015</bibRefCitation>
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). Recently,
|
||||
<bibRefCitation author="Jayawardena, RS" journalOrPublisher="Mycosphere" pageId="30" pageNumber="55" pagination="1192 - 1260" title="Notes on currently accepted species of Colletotrichum." url="https://doi.org/10.5943/mycosphere/si/2c/9" volume="7" year="2016">Jayawardena et al. (2016)</bibRefCitation>
|
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<bibRefCitation id="781269CB9B3515BD2F266A510D14B849" author="Jayawardena, RS" journalOrPublisher="Mycosphere" pageId="30" pageNumber="55" pagination="1192 - 1260" title="Notes on currently accepted species of Colletotrichum." url="https://doi.org/10.5943/mycosphere/si/2c/9" volume="7" year="2016">Jayawardena et al. (2016)</bibRefCitation>
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provided notes
|
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<pageBreakToken pageId="18" pageNumber="43" start="start">on</pageBreakToken>
|
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<pageBreakToken id="BDF992802C4F50551E0684FC9B75A7E5" pageId="18" pageNumber="43" start="start">on</pageBreakToken>
|
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currently accepted species of
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
|
||||
<taxonomicName id="00FCE169DF8DF3C952B8BB32F145A295" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
|
||||
. In this study, the authors introduce a new endophytic
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
|
||||
<taxonomicName id="5F16BC7968A6F44735F7818870FEB7A1" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
|
||||
species and report a known species of endophytic
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
|
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<taxonomicName id="566041BB7189FB3E55E7F41F99F0B09B" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
|
||||
from
|
||||
<taxonomicName genus="Mycelium" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Mycelium gloeosporioides" pageId="18" pageNumber="43" phylum="Basidiomycota" rank="species" species="gloeosporioides">gloeosporioides</taxonomicName>
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<taxonomicName id="DDC0274B0E4E1F7F601A436AF46B4DEF" genus="Mycelium" lsidName="Mycelium gloeosporioides" pageId="18" pageNumber="43" rank="species" species="gloeosporioides">gloeosporioides</taxonomicName>
|
||||
species complex based on morphology and phylogenetic analysis.
|
||||
</paragraph>
|
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</subSubSection>
|
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|
|
|
|||
|
|
@ -1,149 +1,149 @@
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<treatment id="36598EEB5CF0DF46B113A8449C2C17D6" ID-GBIF-Taxon="142664218" LSID="urn:lsid:plazi:treatment:36598EEB5CF0DF46B113A8449C2C17D6" httpUri="http://treatment.plazi.org/id/36598EEB5CF0DF46B113A8449C2C17D6" lastPageId="10" lastPageNumber="35" pageId="9" pageNumber="34" scope_order="Botryosphaeriales" scope_phylum="Ascomycota">
|
||||
<subSubSection id="A09EF0BB66C443A9C47ADCA8BA6C2A9F" pageId="9" pageNumber="34" type="nomenclature">
|
||||
<paragraph id="9B2C587B5B36F24BF36435C3EA3436B2" pageId="9" pageNumber="34">
|
||||
<taxonomicName id="61EC75ED81C27E37CAC7ABB1BC4DAEAD" ID-CoL="4HB8N" authority="Henn., Hedwigia 48: 13 (1908)" class="Dothideomycetes" family="Phyllostictaceae" genus="Phyllosticta" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phyllosticta capitalensis" order="Botryosphaeriales" pageId="9" pageNumber="34" phylum="Ascomycota" rank="species" species="capitalensis">Phyllosticta capitalensis Henn., Hedwigia 48: 13 (1908)</taxonomicName>
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="9" pageNumber="34" type="description">
|
||||
<paragraph pageId="9" pageNumber="34">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="9" pageNumber="34">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="9" pageNumber="34" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="7996B7C5B2BDB5FEAC3D89D85D7E0D7E" pageId="9" pageNumber="34" type="description">
|
||||
<paragraph id="5E36C8A00437CC2BC32B4FA060CE7891" pageId="9" pageNumber="34">Culture characteristics.</paragraph>
|
||||
<paragraph id="03B398042385B1EA2C92EFE00F400504" pageId="9" pageNumber="34">
|
||||
<taxonomicName id="9B5BCC3B28C3081FB7ED12FD05F72150" genus="Colonies" lsidName="Colonies" pageId="9" pageNumber="34" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, PE35), superficial, dark olivaceous with filamentous hyphae and raised edge; reverse dark olivaceous. Sporulating in culture after 2 months.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="9" pageNumber="34" type="genbank numbers">
|
||||
<paragraph pageId="9" pageNumber="34">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="9" pageNumber="34">ITS=MG646954, LSU=MG646953, TEF1=MG646982.</paragraph>
|
||||
<subSubSection id="8184A50BDA619988AED1A9243CC7B85A" pageId="9" pageNumber="34" type="genbank numbers">
|
||||
<paragraph id="17072F8EB57CE7653F2988C2A2EFF429" pageId="9" pageNumber="34">GenBank numbers.</paragraph>
|
||||
<paragraph id="530E10EC642FDFA2B8C3040426401345" pageId="9" pageNumber="34">ITS=MG646954, LSU=MG646953, TEF1=MG646982.</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection lastPageId="10" lastPageNumber="35" pageId="9" pageNumber="34" type="notes">
|
||||
<paragraph pageId="9" pageNumber="34">Notes.</paragraph>
|
||||
<paragraph lastPageId="10" lastPageNumber="35" pageId="9" pageNumber="34">
|
||||
<taxonomicName class="Dothideomycetes" family="Phyllostictaceae" genus="Phyllosticta" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phyllosticta capitalensis" order="Botryosphaeriales" pageId="9" pageNumber="34" phylum="Ascomycota" rank="species" species="capitalensis">Phyllosticta capitalensis</taxonomicName>
|
||||
<subSubSection id="D855A55767AF7BD543F48809E3F76630" lastPageId="10" lastPageNumber="35" pageId="9" pageNumber="34" type="notes">
|
||||
<paragraph id="31AA2D67718B957F652A3CFF1EB0CD70" pageId="9" pageNumber="34">Notes.</paragraph>
|
||||
<paragraph id="3D6151DF826CF67296CCB76DC8321508" lastPageId="10" lastPageNumber="35" pageId="9" pageNumber="34">
|
||||
<taxonomicName id="98D677B7762788AC51A2CC344F0A69EC" class="Dothideomycetes" family="Phyllostictaceae" genus="Phyllosticta" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phyllosticta capitalensis" order="Botryosphaeriales" pageId="9" pageNumber="34" phylum="Ascomycota" rank="species" species="capitalensis">Phyllosticta capitalensis</taxonomicName>
|
||||
(
|
||||
<bibRefCitation pageId="9" pageNumber="34">Hennings 1908</bibRefCitation>
|
||||
<bibRefCitation id="492147F3573EBE90367F21C551B114E0" pageId="9" pageNumber="34">Hennings 1908</bibRefCitation>
|
||||
) is known as an endophytic taxon and a minor plant pathogen. It has a worldwide distribution and has been recorded
|
||||
<pageBreakToken pageId="10" pageNumber="35" start="start">on</pageBreakToken>
|
||||
<pageBreakToken id="71B98488A13FCCB5498E6E45D5A0D309" pageId="10" pageNumber="35" start="start">on</pageBreakToken>
|
||||
70 plant families (
|
||||
<bibRefCitation author="Baayen, RP" journalOrPublisher="Phytopathology" pageId="27" pageNumber="52" pagination="464 - 477" title="Nonpathogenic isolates of the citrus black spot fungus, Guignardiacitricarpa, identified as a cosmopolitan endophyte of woody plants, G. mangiferae (Phyllostictacapitalensis)." url="https://doi.org/10.1094/PHYTO.2002.92.5.464" volume="92" year="2002">Baayen et al. 2002</bibRefCitation>
|
||||
<bibRefCitation id="0D45C2C6827A9A93736B11419DA40A7E" author="Baayen, RP" journalOrPublisher="Phytopathology" pageId="27" pageNumber="52" pagination="464 - 477" title="Nonpathogenic isolates of the citrus black spot fungus, Guignardiacitricarpa, identified as a cosmopolitan endophyte of woody plants, G. mangiferae (Phyllostictacapitalensis)." url="https://doi.org/10.1094/PHYTO.2002.92.5.464" volume="92" year="2002">Baayen et al. 2002</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Okane, I" journalOrPublisher="Mycoscience" pageId="33" pageNumber="58" pagination="353 - 363" title="Extensive host range of an endophytic fungus, Guignardiaendophyllicola (anamorph: Phyllostictacapitalensis)." url="https://doi.org/10.1007/S10267-003-0128-X" volume="44" year="2003">Okane et al. 2003</bibRefCitation>
|
||||
<bibRefCitation id="AFBC565F67BE17246AC832B37F29B37D" author="Okane, I" journalOrPublisher="Mycoscience" pageId="33" pageNumber="58" pagination="353 - 363" title="Extensive host range of an endophytic fungus, Guignardiaendophyllicola (anamorph: Phyllostictacapitalensis)." url="https://doi.org/10.1007/S10267-003-0128-X" volume="44" year="2003">Okane et al. 2003</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Motohashi, K" journalOrPublisher="Mycoscience" pageId="33" pageNumber="58" pagination="291 - 302" title="Phylogenetic analyses of Japanese species of Phyllosticta sensu stricto." url="https://doi.org/10.1007/S10267-009-0487-Z" volume="50" year="2009">Motohashi et al. 2009</bibRefCitation>
|
||||
<bibRefCitation id="E2F744F7E6BD351DFBFC3680DADDD7FD" author="Motohashi, K" journalOrPublisher="Mycoscience" pageId="33" pageNumber="58" pagination="291 - 302" title="Phylogenetic analyses of Japanese species of Phyllosticta sensu stricto." url="https://doi.org/10.1007/S10267-009-0487-Z" volume="50" year="2009">Motohashi et al. 2009</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Wikee, S" journalOrPublisher="Studies in Mycology" pageId="37" pageNumber="62" pagination="1 - 29" title="A phylogenetic re-evaluation of Phyllosticta (Botryosphaeriales)." url="https://doi.org/10.3114/sim0019" volume="76" year="2013">Wikee et al. 2013</bibRefCitation>
|
||||
<bibRefCitation id="E6DA8FCA48BACA665A109A179CE80CBC" author="Wikee, S" journalOrPublisher="Studies in Mycology" pageId="37" pageNumber="62" pagination="1 - 29" title="A phylogenetic re-evaluation of Phyllosticta (Botryosphaeriales)." url="https://doi.org/10.3114/sim0019" volume="76" year="2013">Wikee et al. 2013</bibRefCitation>
|
||||
). The isolate recovered herein clusters with reasonable ML bootstrap support with other
|
||||
<taxonomicName lsidName="P. capitalensis" pageId="10" pageNumber="35" rank="species" species="capitalensis">P. capitalensis</taxonomicName>
|
||||
<taxonomicName id="068A6A7967957C031366B1BF0602914C" lsidName="P. capitalensis" pageId="10" pageNumber="35" rank="species" species="capitalensis">P. capitalensis</taxonomicName>
|
||||
isolates (Figure 5). Morphological examination also depicts similar morphs and hence it is identified as
|
||||
<taxonomicName lsidName="P. capitalensis" pageId="10" pageNumber="35" rank="species" species="capitalensis">P. capitalensis</taxonomicName>
|
||||
<taxonomicName id="84BA77A523D07ADE567845F470A1D2C1" lsidName="P. capitalensis" pageId="10" pageNumber="35" rank="species" species="capitalensis">P. capitalensis</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
<caption pageId="10" pageNumber="35">
|
||||
<paragraph pageId="10" pageNumber="35">
|
||||
<caption id="EE9C3AF011D1EFF90046FDBEC96D3BE7" pageId="10" pageNumber="35">
|
||||
<paragraph id="1A769143B0E776EF931887CAA0A30BAE" pageId="10" pageNumber="35">
|
||||
Figure 5. Phylogram generated from maximum likelihood analysis based on ITS, LSU and TEF1 sequenced data. Maximum likelihood bootstrap values are given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with
|
||||
<taxonomicName class="Leotiomycetes" family="Phacidiaceae" genus="Tiarosporella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Tiarosporella paludosa" order="Helotiales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="paludosa">Tiarosporella paludosa</taxonomicName>
|
||||
<taxonomicName id="A7909D12A4FD7E868E09B264E1A4DDF8" class="Leotiomycetes" family="Phacidiaceae" genus="Tiarosporella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Tiarosporella paludosa" order="Helotiales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="paludosa">Tiarosporella paludosa</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
<caption pageId="10" pageNumber="35">
|
||||
<paragraph pageId="10" pageNumber="35">
|
||||
<caption id="B909DA0DE8D7FC5D8C8BAE70DC1F3634" pageId="10" pageNumber="35">
|
||||
<paragraph id="994CC2BC15F6E9FDC133F658BA50CD01" pageId="10" pageNumber="35">
|
||||
Figure 6.
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae</taxonomicName>
|
||||
<taxonomicName id="76F5B722176DA8F9FF5F12A9B320D9D2" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae</taxonomicName>
|
||||
(MFLU 18-0002, holotype).
|
||||
<normalizedToken originalValue="a–d">a-d</normalizedToken>
|
||||
<normalizedToken id="DFFB5DF283FDDDAE572CB8120CA3D106" originalValue="a–d">a-d</normalizedToken>
|
||||
Mycelia masses. Scale bars: 20
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="19F44E9EA3BF4C78ECBEAB34741722AA" originalValue="μm">μm</normalizedToken>
|
||||
(
|
||||
<normalizedToken originalValue="a–c">a-c</normalizedToken>
|
||||
<normalizedToken id="B0FB6A23FFABB3F89CC50046C791C0AD" originalValue="a–c">a-c</normalizedToken>
|
||||
), 10
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="7948B40CC621C082835E52BF54958F17" originalValue="μm">μm</normalizedToken>
|
||||
(d).
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
|
|
@ -1,180 +1,180 @@
|
|||
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<mods:namePart>Xu, Jianchu</mods:namePart>
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<mods:namePart>Promputtha, Itthayakorn</mods:namePart>
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<mods:namePart>Doilom, Mingkwan</mods:namePart>
|
||||
<mods:namePart id="2BC62F7AAFB45E5C825DB808E9C10EA4">Doilom, Mingkwan</mods:namePart>
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<mods:namePart>Yang, Jun-Bo</mods:namePart>
|
||||
<mods:namePart id="05C05A2D74BE2CB80BEEB8BE0DCF0F66">Yang, Jun-Bo</mods:namePart>
|
||||
</mods:name>
|
||||
<mods:name type="personal">
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||||
<mods:role>
|
||||
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|
||||
</mods:role>
|
||||
<mods:namePart>Tang, Alvin M. C.</mods:namePart>
|
||||
<mods:namePart id="5B92D64ECB787F5EF16032B043BFFC96">Tang, Alvin M. C.</mods:namePart>
|
||||
</mods:name>
|
||||
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||||
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|
||||
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|
||||
</mods:role>
|
||||
<mods:namePart>Karunarathna, Samantha C.</mods:namePart>
|
||||
<mods:namePart id="6CAE2241394D11E1E3A3C11AE22B7D1E">Karunarathna, Samantha C.</mods:namePart>
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||||
</mods:name>
|
||||
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<mods:title>MycoKeys</mods:title>
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<mods:title id="1CF90224A368F042FD57E13813B6747C">MycoKeys</mods:title>
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<mods:part>
|
||||
<mods:date>2018</mods:date>
|
||||
<mods:detail type="volume">
|
||||
<mods:number>33</mods:number>
|
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<mods:part id="03C2238C4CDDBBB9DB5792CCCD403060">
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<mods:date id="AB83A9F1C1A94E4C6C44890CDB40A95D">2018</mods:date>
|
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<mods:detail id="D58C2FED1EFAED2D93BCE35A814E303C" type="volume">
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||||
<mods:number id="CC013F7FD9840AF993A9BB19047194E1">33</mods:number>
|
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</mods:detail>
|
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<mods:extent unit="page">
|
||||
<mods:start>25</mods:start>
|
||||
<mods:end>67</mods:end>
|
||||
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<mods:url id="9F8491464E4ECD08A7938B3955001A6F">http://dx.doi.org/10.3897/mycokeys.33.23670</mods:url>
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<mods:identifier type="DOI">http://dx.doi.org/10.3897/mycokeys.33.23670</mods:identifier>
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<mods:identifier type="Pensoft-Pub">1314-4049-33-25</mods:identifier>
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|
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|
||||
<treatment ID-GBIF-Taxon="142664196" LSID="urn:lsid:plazi:treatment:36CC6A8428BEE886B5641B80183BE8DD" httpUri="http://treatment.plazi.org/id/36CC6A8428BEE886B5641B80183BE8DD" lastPageNumber="41" pageId="16" pageNumber="41">
|
||||
<subSubSection pageId="16" pageNumber="41" type="nomenclature">
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<taxonomicName LSID=" MB823840" authority="Tibpromma & K. D. Hyde" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel pageId="16" pageNumber="41">sp. nov.</taxonomicNameLabel>
|
||||
<treatment id="36CC6A8428BEE886B5641B80183BE8DD" ID-GBIF-Taxon="142664196" LSID="urn:lsid:plazi:treatment:36CC6A8428BEE886B5641B80183BE8DD" httpUri="http://treatment.plazi.org/id/36CC6A8428BEE886B5641B80183BE8DD" lastPageNumber="41" pageId="16" pageNumber="41" scope_family="Diaporthaceae" scope_order="Diaporthales" scope_phylum="Ascomycota">
|
||||
<subSubSection id="A87FDA395C12AEDBF6C04648EB7CE3A6" pageId="16" pageNumber="41" type="nomenclature">
|
||||
<paragraph id="9811E7D276A0DE0E908464E3ED0E1D1D" pageId="16" pageNumber="41">
|
||||
<taxonomicName id="E7E842D941BF561979FD5DD2603C8171" ID-CoL="35D3Q" LSID=" MB823840" authority="Tibpromma & K. D. Hyde" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel id="42C6F94BDEB51EDBA9F36566C1224C32" pageId="16" pageNumber="41">sp. nov.</taxonomicNameLabel>
|
||||
Figure 13
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="etymology">
|
||||
<paragraph pageId="16" pageNumber="41">Etymology.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<subSubSection id="2B07A680846F206A2258042AE7DEB65C" pageId="16" pageNumber="41" type="etymology">
|
||||
<paragraph id="72E9380E732CE8CC1805409234427D30" pageId="16" pageNumber="41">Etymology.</paragraph>
|
||||
<paragraph id="881F6F022B5109A23F8FED4E69784896" pageId="16" pageNumber="41">
|
||||
Name referring to the host genus on which the fungus was first discovered (
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="5ED0AE9E8F3E7854454C1D4FE9947749" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="holotype">
|
||||
<paragraph pageId="16" pageNumber="41">Holotype.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">MFLU 18-0006</paragraph>
|
||||
<subSubSection id="FE390BA9330C41D63C4AE24AA254D1CB" pageId="16" pageNumber="41" type="holotype">
|
||||
<paragraph id="7D595B883298FDF62FA0F390C1105FBE" pageId="16" pageNumber="41">Holotype.</paragraph>
|
||||
<paragraph id="BAB67E735887BC04879B92AE35BD866B" pageId="16" pageNumber="41">MFLU 18-0006</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="description">
|
||||
<paragraph pageId="16" pageNumber="41">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="16" pageNumber="41" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="C25F9E32AE018640FAC4C8F5BAF8A6AA" pageId="16" pageNumber="41" type="description">
|
||||
<paragraph id="3EA95F5A7805C7082632BDED4EDE53A2" pageId="16" pageNumber="41">Culture characteristics.</paragraph>
|
||||
<paragraph id="8EE69F4DEA308A2B70363C47466390A8" pageId="16" pageNumber="41">
|
||||
<taxonomicName id="493CE56661E1F0AC24919C8B1F779C22" genus="Colonies" lsidName="Colonies" pageId="16" pageNumber="41" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, PE77), superficial, white, circular with entire edge, smooth and raised on surface media, flossy and velvety; reverse yellow-white, 9 cm diam. in 10 days. Generative hyphae simple-septate, branched, sub-hyaline, cells with guttules, thin-walled, 1.5-7
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="AD8C8355E49F289A68A1EA12EB2F6CAC" originalValue="µm">µm</normalizedToken>
|
||||
wide. Not sporulating in culture (Figure 13).
|
||||
</paragraph>
|
||||
<caption pageId="16" pageNumber="41">
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<caption id="075C68CCED10158A5B0159E687D4433B" pageId="16" pageNumber="41">
|
||||
<paragraph id="F905B22598B7781DD80A60F0B700FE16" pageId="16" pageNumber="41">
|
||||
Figure 12. Phylogram generated from maximum likelihood analysis based on ITS, TEF1 and
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="FA4676117EBFBD8C7AF4C039322EDE6C" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
sequenced data. Maximum likelihood (left) and Bayesian inference (right) bootstrap values are given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe ambigua" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="ambigua">Diaporthe ambigua</taxonomicName>
|
||||
<taxonomicName id="71B5B280FABFDF2ED0D30B0433A30645" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe ambigua" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="ambigua">Diaporthe ambigua</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
<caption pageId="16" pageNumber="41">
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<caption id="61F7693E895B1DBA723E6D0DDDF20E09" pageId="16" pageNumber="41">
|
||||
<paragraph id="7F40287DBDF507CF593EB0915D6A9B33" pageId="16" pageNumber="41">
|
||||
Figure 13.
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola</taxonomicName>
|
||||
<taxonomicName id="23CE78397762466B0C4199755BF2D9AA" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola</taxonomicName>
|
||||
(MFLU 18-0006, holotype).
|
||||
<normalizedToken originalValue="a–c">a-c</normalizedToken>
|
||||
<normalizedToken id="F62B9B2A7ADF77A00E9FC2F64FA2B60A" originalValue="a–c">a-c</normalizedToken>
|
||||
Mycelia masses. Scale bars: 5
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="A44D29DFA34B31D6D8695F849CAAA8B5" originalValue="µm">µm</normalizedToken>
|
||||
(
|
||||
<normalizedToken originalValue="a–c">a-c</normalizedToken>
|
||||
<normalizedToken id="9066F759469FB2FCC688E275347C5E46" originalValue="a–c">a-c</normalizedToken>
|
||||
).
|
||||
</paragraph>
|
||||
</caption>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="materials_examined">
|
||||
<paragraph pageId="16" pageNumber="41">Material examined.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<subSubSection id="50095F05F4F7D779FA22AB3E71825719" pageId="16" pageNumber="41" type="materials_examined">
|
||||
<paragraph id="A7B0D1E42A4212FE041582E81B207191" pageId="16" pageNumber="41">Material examined.</paragraph>
|
||||
<paragraph id="AC9ADDBBF8371379DFBEED48C634862F" pageId="16" pageNumber="41">
|
||||
THAILAND, Chumphon, Pathio District, on healthy leaves of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="56BA935328034391DBBDBB5261DD0D26" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. (
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="16" pageNumber="41" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="FE46A5FDA90072DA1268AEA9C7833B94" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
), 1 December 2016, S. Tibpromma PE77 (MFLU 18-0006, holotype); HKAS100858, paratype, ex-type living cultures, MFLUCC 17-0607 = KUMCC 17-0297.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="genbank numbers">
|
||||
<paragraph pageId="16" pageNumber="41">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<subSubSection id="DA39DECC7079FB494884D1E3ED898FB7" pageId="16" pageNumber="41" type="genbank numbers">
|
||||
<paragraph id="6ECF9C8A60DFBE396F6409A73E9E60F2" pageId="16" pageNumber="41">GenBank numbers.</paragraph>
|
||||
<paragraph id="A2DFBC5B3A5EB78886D4062DA1E66D59" pageId="16" pageNumber="41">
|
||||
ITS=MG646974,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="8BCA67F34006839C9BFDC67D17ACC236" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
=MG646930, ACT=MG646930.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="notes">
|
||||
<paragraph pageId="16" pageNumber="41">Notes.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Botryosphaeriales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
<subSubSection id="471880E5F863B9BC95AA01A38BABBE87" pageId="16" pageNumber="41" type="notes">
|
||||
<paragraph id="4A68E200966EE4287120AB3B436FB61C" pageId="16" pageNumber="41">Notes.</paragraph>
|
||||
<paragraph id="01A7E6C68F14AD917AEE36B295F96B75" pageId="16" pageNumber="41">
|
||||
<taxonomicName id="FF63DFD3584F1E475DF99E8E5B2D3363" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Botryosphaeriales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
species are plant pathogens, endophytes or saprobes (
|
||||
<bibRefCitation pageId="16" pageNumber="41">Carroll 1986</bibRefCitation>
|
||||
<bibRefCitation id="F435C7BB1CA7FF3DD36CA7C1EAB93D3D" pageId="16" pageNumber="41">Carroll 1986</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Garcia-Reyne, A" journalOrPublisher="Transplant Infectious Disease" pageId="29" pageNumber="54" pagination="204 - 207" title="Cutaneous infection by Phomopsislongicolla in a renal transplant recipient from Guinea: first report of human infection by this fungus." url="https://doi.org/10.1111/j.1399-3062.2010.00570.x" volume="13" year="2011">Garcia-Reyne et al. 2011</bibRefCitation>
|
||||
<bibRefCitation id="FFF5FA8AAA381EF67BCA9DFEEAD0108F" author="Garcia-Reyne, A" journalOrPublisher="Transplant Infectious Disease" pageId="29" pageNumber="54" pagination="204 - 207" title="Cutaneous infection by Phomopsislongicolla in a renal transplant recipient from Guinea: first report of human infection by this fungus." url="https://doi.org/10.1111/j.1399-3062.2010.00570.x" volume="13" year="2011">Garcia-Reyne et al. 2011</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="36" pageNumber="61" pagination="189 - 225" title="The genus Phomopsis: biology, applications, species concepts and names of common pathogens." url="https://doi.org/10.1007/s13225-011-0126-9" volume="50" year="2011">Udayanga et al. 2011</bibRefCitation>
|
||||
<bibRefCitation id="6B990F786338D546E8BED1D0EF951E4F" author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="36" pageNumber="61" pagination="189 - 225" title="The genus Phomopsis: biology, applications, species concepts and names of common pathogens." url="https://doi.org/10.1007/s13225-011-0126-9" volume="50" year="2011">Udayanga et al. 2011</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="157 - 171" title="A multi-locus phylogenetic evaluation of Diaporthe (Phomopsis)." url="https://doi.org/10.1007/s13225-012-0190-9" volume="56" year="2012">2012</bibRefCitation>
|
||||
<bibRefCitation id="A383D5AEBFF4C4671D9BADC5C4743C3F" author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="157 - 171" title="A multi-locus phylogenetic evaluation of Diaporthe (Phomopsis)." url="https://doi.org/10.1007/s13225-012-0190-9" volume="56" year="2012">2012</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="203 - 229" title="Insights into the genus Diaporthe: phylogenetic species delimitation in the D. eres species complex." url="https://doi.org/10.1007/s13225-014-0297-2" volume="67" year="2014">2014</bibRefCitation>
|
||||
<bibRefCitation id="8A103FAABDF8F92B0D2731639B87B4BE" author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="203 - 229" title="Insights into the genus Diaporthe: phylogenetic species delimitation in the D. eres species complex." url="https://doi.org/10.1007/s13225-014-0297-2" volume="67" year="2014">2014</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Hyde, KD" journalOrPublisher="Fungal Diversity" pageId="30" pageNumber="55" pagination="21 - 125" title="One stop shop: backbones trees for important phytopathogenic genera: I." url="https://doi.org/10.1007/s13225-014-0298-1" volume="67" year="2014">Hyde et al. 2014</bibRefCitation>
|
||||
<bibRefCitation id="2BE88AEEF5A5FD40B852E24C8A440024" author="Hyde, KD" journalOrPublisher="Fungal Diversity" pageId="30" pageNumber="55" pagination="21 - 125" title="One stop shop: backbones trees for important phytopathogenic genera: I." url="https://doi.org/10.1007/s13225-014-0298-1" volume="67" year="2014">Hyde et al. 2014</bibRefCitation>
|
||||
). Here, a new species
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola</taxonomicName>
|
||||
<taxonomicName id="6C65EFDE952D40EAB38B981BC1F4D017" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola</taxonomicName>
|
||||
is introduced based on phylogeny support. Based on phylogenetic analysis, the new species was well-separated from closely related species of
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Botryosphaeriales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
<taxonomicName id="363DA774F6D99F6C31D7E9752E82FF64" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Botryosphaeriales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
(61% in ML, 0.97 in PP). However, this isolate is an endophytic fungus and did not sporulate in culture during 5 months (Figure 13).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,126 +1,126 @@
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The family
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was introduced by
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and is the largest family of the order
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(
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<bibRefCitation author="Hyde, KD" journalOrPublisher="Fungal Diversity" pageId="29" pageNumber="54" pagination="1 - 313" title="Families of Dothideomycetes." url="https://doi.org/10.1007/s13225-013-0263-4" volume="63" year="2013">Hyde et al. 2013</bibRefCitation>
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;
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<bibRefCitation author="Ariyawansa, HA" journalOrPublisher="Fungal Diversity" pageId="27" pageNumber="52" pagination="85 - 139" title="Towards a natural classification and backbone tree for Pleosporaceae." url="https://doi.org/10.1007/s13225-015-0323-z" volume="71" year="2015 b">Ariyawansa et al. 2015b</bibRefCitation>
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<bibRefCitation id="2B09D29202C1BAD5183B793F752CD938" author="Ariyawansa, HA" journalOrPublisher="Fungal Diversity" pageId="27" pageNumber="52" pagination="85 - 139" title="Towards a natural classification and backbone tree for Pleosporaceae." url="https://doi.org/10.1007/s13225-015-0323-z" volume="71" year="2015 b">Ariyawansa et al. 2015b</bibRefCitation>
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;
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<bibRefCitation author="Liu, JK" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="75 - 99" title="Ranking higher taxa using divergence times: a case study in Dothideomycetes." url="https://doi.org/10.1007/s13225-017-0385-1" volume="84" year="2017">Liu et al. 2017</bibRefCitation>
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<bibRefCitation id="1E63939A93B9C10A2AD785106304B9B7" author="Liu, JK" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="75 - 99" title="Ranking higher taxa using divergence times: a case study in Dothideomycetes." url="https://doi.org/10.1007/s13225-017-0385-1" volume="84" year="2017">Liu et al. 2017</bibRefCitation>
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). Members of this family can be endophytes, aquatic or terrestrial saprobes, plant
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<pageBreakToken pageId="15" pageNumber="40" start="start">pathogens</pageBreakToken>
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<pageBreakToken id="AA26DD790723418B492AE468D764A6D9" pageId="15" pageNumber="40" start="start">pathogens</pageBreakToken>
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or opportunistic animal pathogens (
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<bibRefCitation pageId="15" pageNumber="40">Sivanesan 1984</bibRefCitation>
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<bibRefCitation id="FE56B839A9047C36312A886D4C8E1E07" pageId="15" pageNumber="40">Sivanesan 1984</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Carter, E" journalOrPublisher="Journal of Clinical Microbiology" pageId="27" pageNumber="52" pagination="5419 - 5423" title="Fatal cerebral phaeohyphomycosis due to Curvularia lunata in an immunocompetent patient." url="https://doi.org/10.1128/JCM.42.11.5419-5423.2004" volume="42" year="2004">Carter and Boudreaux 2004</bibRefCitation>
|
||||
<bibRefCitation id="DB0F1A1E52B55ABFEA1314932EC2527A" author="Carter, E" journalOrPublisher="Journal of Clinical Microbiology" pageId="27" pageNumber="52" pagination="5419 - 5423" title="Fatal cerebral phaeohyphomycosis due to Curvularia lunata in an immunocompetent patient." url="https://doi.org/10.1128/JCM.42.11.5419-5423.2004" volume="42" year="2004">Carter and Boudreaux 2004</bibRefCitation>
|
||||
). A backbone tree for
|
||||
<taxonomicName genus="Pleosporaceae" lsidName="Pleosporaceae" pageId="15" pageNumber="40" rank="genus">Pleosporaceae</taxonomicName>
|
||||
<taxonomicName id="03428B3FB5F0CDE5FF8FD9B6CC579F8F" genus="Pleosporaceae" lsidName="Pleosporaceae" pageId="15" pageNumber="40" rank="genus">Pleosporaceae</taxonomicName>
|
||||
was provided by
|
||||
<bibRefCitation author="Ariyawansa, HA" journalOrPublisher="Fungal Divers" pageId="27" pageNumber="52" pagination="1 - 248" title="Fungal diversity notes 111 - 252: taxonomic and phylogenetic contributions to fungal taxa." url="https://doi.org/10.1007/s13225-015-0346-5" volume="75" year="2015 a">Ariyawansa et al. (2015a)</bibRefCitation>
|
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<bibRefCitation id="5A319CE05277F4A0E7362BE361E5CE1C" author="Ariyawansa, HA" journalOrPublisher="Fungal Divers" pageId="27" pageNumber="52" pagination="1 - 248" title="Fungal diversity notes 111 - 252: taxonomic and phylogenetic contributions to fungal taxa." url="https://doi.org/10.1007/s13225-015-0346-5" volume="75" year="2015 a">Ariyawansa et al. (2015a)</bibRefCitation>
|
||||
. In this study,
|
||||
<taxonomicName class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
<taxonomicName id="CCF1601ECD3D220DED8C4D5D4D80D4F8" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
is reported from a
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="15" pageNumber="40" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="E5BAF5930C7B1EB27DA16500834B92FB" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="15" pageNumber="40" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. host in Thailand.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,170 +1,170 @@
|
|||
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<treatment ID-GBIF-Taxon="142664167" LSID="urn:lsid:plazi:treatment:3C11012E51FEBE4DB8E61E8817071F09" httpUri="http://treatment.plazi.org/id/3C11012E51FEBE4DB8E61E8817071F09" lastPageId="8" lastPageNumber="32" pageId="7" pageNumber="32">
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The order
|
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|
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was introduced by
|
||||
<bibRefCitation author="Schoch, CL" journalOrPublisher="Mycologia" pageId="34" pageNumber="59" pagination="1041 - 1052" title="A multigene phylogeny of the Dothideomycetes using four nuclear loci." url="https://doi.org/10.1080/15572536.2006.11832632" volume="98" year="2006">Schoch et al. (2006)</bibRefCitation>
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with
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|
||||
as the type family.
|
||||
<taxonomicName genus="Botryosphaeriales" lsidName="Botryosphaeriales" pageId="7" pageNumber="32" rank="genus">Botryosphaeriales</taxonomicName>
|
||||
<taxonomicName id="6E84E57D519D88C6B3C7B15CA4BE9326" genus="Botryosphaeriales" lsidName="Botryosphaeriales" pageId="7" pageNumber="32" rank="genus">Botryosphaeriales</taxonomicName>
|
||||
is a diverse order with a worldwide distribution, comprising species that vary from endophytes to pathogens (
|
||||
<bibRefCitation author="Slippers, B" journalOrPublisher="Fungal Biology Reviews" pageId="35" pageNumber="60" pagination="90 - 106" title="Botryosphaeriaceae as endophytes and latent pathogens of woody plants: diversity, ecology and impact." url="https://doi.org/10.1016/j.fbr.2007.06.002" volume="21" year="2007">Slippers and Wingfield 2007</bibRefCitation>
|
||||
<bibRefCitation id="2D8321D5F09D33F0C6331A511C5D8498" author="Slippers, B" journalOrPublisher="Fungal Biology Reviews" pageId="35" pageNumber="60" pagination="90 - 106" title="Botryosphaeriaceae as endophytes and latent pathogens of woody plants: diversity, ecology and impact." url="https://doi.org/10.1016/j.fbr.2007.06.002" volume="21" year="2007">Slippers and Wingfield 2007</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Phillips, AJL" journalOrPublisher="Studies in Mycology" pageId="34" pageNumber="59" pagination="51 - 167" title="The Botryosphaeriaceae: genera and species known from culture." url="https://doi.org/10.3114/sim0021" volume="76" year="2013">Phillips et al. 2013</bibRefCitation>
|
||||
<bibRefCitation id="ED6CE5CAA641AD8EE496E990A8D523FD" author="Phillips, AJL" journalOrPublisher="Studies in Mycology" pageId="34" pageNumber="59" pagination="51 - 167" title="The Botryosphaeriaceae: genera and species known from culture." url="https://doi.org/10.3114/sim0021" volume="76" year="2013">Phillips et al. 2013</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Chethana, KWT" journalOrPublisher="Mycologia" pageId="28" pageNumber="53" url="https://doi.org/10.5943/mycosphere/si/1b/3" year="2016">Chethana et al. 2016</bibRefCitation>
|
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<bibRefCitation id="49CD5B468A6FBE0BFFEA2B237246C461" author="Chethana, KWT" journalOrPublisher="Mycologia" pageId="28" pageNumber="53" url="https://doi.org/10.5943/mycosphere/si/1b/3" year="2016">Chethana et al. 2016</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Daranagama, DA" journalOrPublisher="Mycosphere" pageId="28" pageNumber="53" pagination="933 - 941" title="Phaeobotryonnegundinis sp. nov. (Botryosphaeriales) from Russia." url="https://doi.org/10.5943/mycosphere/si/1b/2" volume="7" year="2016">Daranagama et al. 2016</bibRefCitation>
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<bibRefCitation id="D02F9287893BE4B2D619CCF16477A1D1" author="Daranagama, DA" journalOrPublisher="Mycosphere" pageId="28" pageNumber="53" pagination="933 - 941" title="Phaeobotryonnegundinis sp. nov. (Botryosphaeriales) from Russia." url="https://doi.org/10.5943/mycosphere/si/1b/2" volume="7" year="2016">Daranagama et al. 2016</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Dissanayake, AJ" journalOrPublisher="Mycosphere" pageId="28" pageNumber="53" pagination="1001 - 1073" title="Botryosphaeriaceae: Current status of genera and species." url="https://doi.org/10.5943/mycosphere/si/1b/13" volume="7" year="2016">Dissanayake et al. 2016</bibRefCitation>
|
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<bibRefCitation id="9B05789EE13F096104AFBB618A87CA23" author="Dissanayake, AJ" journalOrPublisher="Mycosphere" pageId="28" pageNumber="53" pagination="1001 - 1073" title="Botryosphaeriaceae: Current status of genera and species." url="https://doi.org/10.5943/mycosphere/si/1b/13" volume="7" year="2016">Dissanayake et al. 2016</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Konta, S" journalOrPublisher="Mycosphere" pageId="31" pageNumber="56" pagination="921 - 932" title="Botryosphaeriaceae from palms in Thailand- Barriopsisarchontophoenicis sp. nov, from Archontophoenixalexandrae." url="https://doi.org/10.5943/mycosphere/si/1b/1" volume="7" year="2016 a">Konta et al. 2016a</bibRefCitation>
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<bibRefCitation id="DEC08F775A374172D4DB8B66491CB977" author="Konta, S" journalOrPublisher="Mycosphere" pageId="31" pageNumber="56" pagination="921 - 932" title="Botryosphaeriaceae from palms in Thailand- Barriopsisarchontophoenicis sp. nov, from Archontophoenixalexandrae." url="https://doi.org/10.5943/mycosphere/si/1b/1" volume="7" year="2016 a">Konta et al. 2016a</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Konta, S" journalOrPublisher="Mycosphere" pageId="31" pageNumber="56" pagination="950 - 961" title="Botryosphaeriaceae from palms in Thailand II-two new species of Neodeightonia, N. rattanica and N. rattanicola from Calamus (rattan palm)." url="https://doi.org/10.5943/mycosphere/si/1b/6" volume="7" year="2016 b">b</bibRefCitation>
|
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<bibRefCitation id="27FA0F29A9FEDD1546FD0042BD6259AB" author="Konta, S" journalOrPublisher="Mycosphere" pageId="31" pageNumber="56" pagination="950 - 961" title="Botryosphaeriaceae from palms in Thailand II-two new species of Neodeightonia, N. rattanica and N. rattanicola from Calamus (rattan palm)." url="https://doi.org/10.5943/mycosphere/si/1b/6" volume="7" year="2016 b">b</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Linaldeddu, BT" journalOrPublisher="European Journal of Plant Pathology" pageId="31" pageNumber="56" pagination="259 - 279" title="Phylogeny, morphology and pathogenicity of Botryosphaeriaceae, Diatrypaceae and Gnomoniaceae associated with branch diseases of hazelnut in Sardinia (Italy)." url="https://doi.org/10.1007/s10658-016-0912-z" volume="146" year="2016 a">Linaldeddu et al. 2016a</bibRefCitation>
|
||||
<bibRefCitation id="B7B3256944D5C21E6AD5C1F61DE209C8" author="Linaldeddu, BT" journalOrPublisher="European Journal of Plant Pathology" pageId="31" pageNumber="56" pagination="259 - 279" title="Phylogeny, morphology and pathogenicity of Botryosphaeriaceae, Diatrypaceae and Gnomoniaceae associated with branch diseases of hazelnut in Sardinia (Italy)." url="https://doi.org/10.1007/s10658-016-0912-z" volume="146" year="2016 a">Linaldeddu et al. 2016a</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Linaldeddu, BT" journalOrPublisher="Mycosphere" pageId="32" pageNumber="57" pagination="893 - 905" title="Sardiniellaurbana gen. et sp. nov., a new member of the Botryosphaeriaceae isolated from declining Celtisaustralis trees in Sardinian streetscapes." url="https://doi.org/10.5943/mycosphere/si/1b/5" volume="7" year="2016 b">b</bibRefCitation>
|
||||
<bibRefCitation id="AAA5483C1602594B513AD96E3A29925B" author="Linaldeddu, BT" journalOrPublisher="Mycosphere" pageId="32" pageNumber="57" pagination="893 - 905" title="Sardiniellaurbana gen. et sp. nov., a new member of the Botryosphaeriaceae isolated from declining Celtisaustralis trees in Sardinian streetscapes." url="https://doi.org/10.5943/mycosphere/si/1b/5" volume="7" year="2016 b">b</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Linaldeddu, BT" journalOrPublisher="Mycosphere" pageId="32" pageNumber="57" pagination="962 - 977" title="Botryosphaeriaceae species associated with lentisk dieback in Italy and description of Diplodiainsularis sp. nov." url="https://doi.org/10.5943/mycosphere/si/1b/8" volume="7" year="2016 c">c</bibRefCitation>
|
||||
<bibRefCitation id="D8A5D0D7DDC492FA246DC75D76462BC8" author="Linaldeddu, BT" journalOrPublisher="Mycosphere" pageId="32" pageNumber="57" pagination="962 - 977" title="Botryosphaeriaceae species associated with lentisk dieback in Italy and description of Diplodiainsularis sp. nov." url="https://doi.org/10.5943/mycosphere/si/1b/8" volume="7" year="2016 c">c</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Manawasinghe, IS" journalOrPublisher="Mycosphere" pageId="33" pageNumber="58" pagination="883 - 892" title="Mycosphere Essays 14: Assessing the aggressiveness of plant pathogenic Botryosphaeriaceae." url="https://doi.org/10.5943/mycosphere/si/1b/7" volume="7" year="2016">Manawasinghe et al. 2016</bibRefCitation>
|
||||
<bibRefCitation id="992253B9319AC85433FA4ACBDF1AFB92" author="Manawasinghe, IS" journalOrPublisher="Mycosphere" pageId="33" pageNumber="58" pagination="883 - 892" title="Mycosphere Essays 14: Assessing the aggressiveness of plant pathogenic Botryosphaeriaceae." url="https://doi.org/10.5943/mycosphere/si/1b/7" volume="7" year="2016">Manawasinghe et al. 2016</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Zhang, M" journalOrPublisher="Mycosphere" pageId="38" pageNumber="63" pagination="942 - 949" title="Two new species of Spencermartinsia (Botryosphaeriaceae, Botryosphaeriales) from China." volume="7" year="2017">Zhang et al. 2017</bibRefCitation>
|
||||
<bibRefCitation id="D9B16AF15BDD7DEC01302C59347EAD8F" author="Zhang, M" journalOrPublisher="Mycosphere" pageId="38" pageNumber="63" pagination="942 - 949" title="Two new species of Spencermartinsia (Botryosphaeriaceae, Botryosphaeriales) from China." volume="7" year="2017">Zhang et al. 2017</bibRefCitation>
|
||||
). Currently, nine families are recognised, namely,
|
||||
<taxonomicName family="Aplosporellaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Aplosporellaceae</taxonomicName>
|
||||
<taxonomicName id="33ABE7A097AE4CD69930A34006380E19" class="Dothideomycetes" family="Aplosporellaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Botryosphaeriales" pageId="7" pageNumber="32" phylum="Ascomycota" rank="family">Aplosporellaceae</taxonomicName>
|
||||
,
|
||||
<taxonomicName family="Botryosphaeriaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Botryosphaeriaceae</taxonomicName>
|
||||
<taxonomicName id="178F4C94FA55ECF9FC70D086C724BA8D" class="Dothideomycetes" family="Botryosphaeriaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Botryosphaeriales" pageId="7" pageNumber="32" phylum="Ascomycota" rank="family">Botryosphaeriaceae</taxonomicName>
|
||||
,
|
||||
<taxonomicName family="Endomelanconiopsisaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Endomelanconiopsisaceae</taxonomicName>
|
||||
<taxonomicName id="D72D776A006F7A8E88235FF12DF76CC5" family="Endomelanconiopsisaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Endomelanconiopsisaceae</taxonomicName>
|
||||
,
|
||||
<taxonomicName family="Melanopsaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Melanopsaceae</taxonomicName>
|
||||
<taxonomicName id="16F2AFACF841D83A17C4AC35E71C0C41" class="Dothideomycetes" family="Melanopsaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Botryosphaeriales" pageId="7" pageNumber="32" phylum="Ascomycota" rank="family">Melanopsaceae</taxonomicName>
|
||||
,
|
||||
<taxonomicName family="Phyllostictaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Phyllostictaceae</taxonomicName>
|
||||
<taxonomicName id="AF4E432ADF0E1BA1DF1AB836E02D7991" class="Dothideomycetes" family="Phyllostictaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Botryosphaeriales" pageId="7" pageNumber="32" phylum="Ascomycota" rank="family">Phyllostictaceae</taxonomicName>
|
||||
,
|
||||
<taxonomicName family="Planistromellaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Planistromellaceae</taxonomicName>
|
||||
<taxonomicName id="53AFC67F3DB20C90366F36CE5DC908BE" class="Dothideomycetes" family="Planistromellaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Botryosphaeriales" pageId="7" pageNumber="32" phylum="Ascomycota" rank="family">Planistromellaceae</taxonomicName>
|
||||
,
|
||||
<taxonomicName family="Pseudofusicoccumaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Pseudofusicoccumaceae</taxonomicName>
|
||||
<taxonomicName id="3E7D629E5A3981230BD03F99067078B9" family="Pseudofusicoccumaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Pseudofusicoccumaceae</taxonomicName>
|
||||
,
|
||||
<taxonomicName family="Saccharataceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Saccharataceae</taxonomicName>
|
||||
<taxonomicName id="6213AF5A3E7D16F5794030BF625BE7BE" class="Dothideomycetes" family="Saccharataceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Botryosphaeriales" pageId="7" pageNumber="32" phylum="Ascomycota" rank="family">Saccharataceae</taxonomicName>
|
||||
and
|
||||
<taxonomicName family="Septorioideaceae" lsidName="Mycelium" pageId="7" pageNumber="32" rank="family">Septorioideaceae</taxonomicName>
|
||||
<pageBreakToken pageId="8" pageNumber="33" start="start">(</pageBreakToken>
|
||||
<bibRefCitation author="Schoch, CL" journalOrPublisher="Mycologia" pageId="34" pageNumber="59" pagination="1041 - 1052" title="A multigene phylogeny of the Dothideomycetes using four nuclear loci." url="https://doi.org/10.1080/15572536.2006.11832632" volume="98" year="2006">Schoch et al. 2006</bibRefCitation>
|
||||
<taxonomicName id="9EB89AF313BDC947FFF83DBD505B44C5" class="Dothideomycetes" family="Septorioideaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Botryosphaeriales" pageId="7" pageNumber="32" phylum="Ascomycota" rank="family">Septorioideaceae</taxonomicName>
|
||||
<pageBreakToken id="7D9ADE9C5338E42AE89B2B30EFABBDE8" pageId="8" pageNumber="33" start="start">(</pageBreakToken>
|
||||
<bibRefCitation id="650425E2ADE3C21196F854E1D7F4BFFD" author="Schoch, CL" journalOrPublisher="Mycologia" pageId="34" pageNumber="59" pagination="1041 - 1052" title="A multigene phylogeny of the Dothideomycetes using four nuclear loci." url="https://doi.org/10.1080/15572536.2006.11832632" volume="98" year="2006">Schoch et al. 2006</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Minnis, AM" journalOrPublisher="Persoonia" pageId="33" pageNumber="58" pagination="11 - 28" title="Phylogeny and taxonomic revision of the Planistromellaceae including its coelomycetous anamorphs: contributions towards a monograph of the genus Kellermania." url="http://dx.doi.org/10.3767/003158512X658766" volume="29" year="2012">Minnis et al. 2012</bibRefCitation>
|
||||
<bibRefCitation id="F0C880084BC8D4A74877B79C7ED3ABCB" author="Minnis, AM" journalOrPublisher="Persoonia" pageId="33" pageNumber="58" pagination="11 - 28" title="Phylogeny and taxonomic revision of the Planistromellaceae including its coelomycetous anamorphs: contributions towards a monograph of the genus Kellermania." url="http://dx.doi.org/10.3767/003158512X658766" volume="29" year="2012">Minnis et al. 2012</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Wikee, S" journalOrPublisher="Studies in Mycology" pageId="37" pageNumber="62" pagination="1 - 29" title="A phylogenetic re-evaluation of Phyllosticta (Botryosphaeriales)." url="https://doi.org/10.3114/sim0019" volume="76" year="2013">Wikee et al. 2013</bibRefCitation>
|
||||
<bibRefCitation id="4FFECA39F022423E0BCA32F021DB794D" author="Wikee, S" journalOrPublisher="Studies in Mycology" pageId="37" pageNumber="62" pagination="1 - 29" title="A phylogenetic re-evaluation of Phyllosticta (Botryosphaeriales)." url="https://doi.org/10.3114/sim0019" volume="76" year="2013">Wikee et al. 2013</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Slippers, B" journalOrPublisher="Studies in Mycology" pageId="35" pageNumber="60" pagination="31 - 49" title="Phylogenetic lineages in the Botryosphaeriales: a systematic and evolutionary framework." url="https://doi.org/10.3114/sim0020" volume="76" year="2013">Slippers et al. 2013</bibRefCitation>
|
||||
<bibRefCitation id="982DDFF17C7B55F02BB9313CAF7A7A0B" author="Slippers, B" journalOrPublisher="Studies in Mycology" pageId="35" pageNumber="60" pagination="31 - 49" title="Phylogenetic lineages in the Botryosphaeriales: a systematic and evolutionary framework." url="https://doi.org/10.3114/sim0020" volume="76" year="2013">Slippers et al. 2013</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Wyka, SA" journalOrPublisher="Fungal Biology" pageId="38" pageNumber="63" pagination="1030 - 1040" title="The new family Septorioideaceae, within the Botryosphaeriales and Septorioidesstrobi as a new species associated with needle defoliation of Pinusstrobus in the United States." url="https://doi.org/10.1016/j.funbio.2016.04.005" volume="120" year="2016">Wyka and Broders 2016</bibRefCitation>
|
||||
<bibRefCitation id="49C136273C2D4124857D7FCFD8F6ED34" author="Wyka, SA" journalOrPublisher="Fungal Biology" pageId="38" pageNumber="63" pagination="1030 - 1040" title="The new family Septorioideaceae, within the Botryosphaeriales and Septorioidesstrobi as a new species associated with needle defoliation of Pinusstrobus in the United States." url="https://doi.org/10.1016/j.funbio.2016.04.005" volume="120" year="2016">Wyka and Broders 2016</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Dissanayake, AJ" journalOrPublisher="Mycosphere" pageId="28" pageNumber="53" pagination="1001 - 1073" title="Botryosphaeriaceae: Current status of genera and species." url="https://doi.org/10.5943/mycosphere/si/1b/13" volume="7" year="2016">Dissanayake et al. 2016</bibRefCitation>
|
||||
<bibRefCitation id="0B87D5A8442C7B7F64AAB8C6EF470CA7" author="Dissanayake, AJ" journalOrPublisher="Mycosphere" pageId="28" pageNumber="53" pagination="1001 - 1073" title="Botryosphaeriaceae: Current status of genera and species." url="https://doi.org/10.5943/mycosphere/si/1b/13" volume="7" year="2016">Dissanayake et al. 2016</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Yang, T" journalOrPublisher="Fungal Biology" pageId="38" pageNumber="63" pagination="322 - 346" title="Families, genera and species of Botryosphaeriales." url="https://doi.org/10.1016/j.funbio.2016.11.001" volume="121" year="2017">Yang et al. 2017</bibRefCitation>
|
||||
<bibRefCitation id="8A45E9AAA42F464A71AF1390E7C9B7F8" author="Yang, T" journalOrPublisher="Fungal Biology" pageId="38" pageNumber="63" pagination="322 - 346" title="Families, genera and species of Botryosphaeriales." url="https://doi.org/10.1016/j.funbio.2016.11.001" volume="121" year="2017">Yang et al. 2017</bibRefCitation>
|
||||
). In this study,
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="8" pageNumber="33" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae</taxonomicName>
|
||||
<taxonomicName id="A9635796661F184C7FE9B13825B52265" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="8" pageNumber="33" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae</taxonomicName>
|
||||
is introduced as a new species and reports are provided on
|
||||
<taxonomicName class="Dothideomycetes" family="Phyllostictaceae" genus="Phyllosticta" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phyllosticta capitalensis" order="Botryosphaeriales" pageId="8" pageNumber="33" phylum="Ascomycota" rank="species" species="capitalensis">Phyllosticta capitalensis</taxonomicName>
|
||||
<taxonomicName id="4EBEC4AD5DCEB9AEE75212843339CF77" class="Dothideomycetes" family="Phyllostictaceae" genus="Phyllosticta" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phyllosticta capitalensis" order="Botryosphaeriales" pageId="8" pageNumber="33" phylum="Ascomycota" rank="species" species="capitalensis">Phyllosticta capitalensis</taxonomicName>
|
||||
and
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="8" pageNumber="33" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae</taxonomicName>
|
||||
<taxonomicName id="602FD8E698E3D2369D6517B11E0F7AD8" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Lasiodiplodia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Lasiodiplodia theobromae" order="Botryosphaeriales" pageId="8" pageNumber="33" phylum="Ascomycota" rank="species" species="theobromae">Lasiodiplodia theobromae</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,130 +1,130 @@
|
|||
<document ID-DOI="http://dx.doi.org/10.3897/mycokeys.33.23670" ID-GBIF-Dataset="42cbc858-8729-4618-9467-590ea7ca068e" ID-Pensoft-Pub="1314-4049-33-25" ModsDocAuthor="" ModsDocDate="2018" ModsDocID="1314-4049-33-25" ModsDocOrigin="MycoKeys 33" ModsDocTitle="Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand" checkinTime="1522305991188" checkinUser="pensoft" docAuthor="Tibpromma, Saowaluck, Hyde, Kevin D., Bhat, Jayarama D., Mortimer, Peter E., Xu, Jianchu, Promputtha, Itthayakorn, Doilom, Mingkwan, Yang, Jun-Bo, Tang, Alvin M. C. & Karunarathna, Samantha C." docDate="2018" docId="3F215A125E52A9A89BD7502D77DB3743" docLanguage="en" docName="MycoKeys 33: 25-67" docOrigin="MycoKeys 33" docSource="http://dx.doi.org/10.3897/mycokeys.33.23670" docTitle="Endopandanicola Tibpromma & K. D. Hyde, gen. nov." docType="treatment" docVersion="4" lastPageNumber="30" masterDocId="B85B6F41CC50A742FFD77F5B3B598C43" masterDocTitle="Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand" masterLastPageNumber="67" masterPageNumber="25" pageNumber="30" updateTime="1643467627895" updateUser="ExternalLinkService">
|
||||
<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
|
||||
<mods:titleInfo>
|
||||
<mods:title>Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand</mods:title>
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<mods:namePart>Hyde, Kevin D.</mods:namePart>
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<mods:namePart>Mortimer, Peter E.</mods:namePart>
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<treatment ID-GBIF-Taxon="142664151" LSID="urn:lsid:plazi:treatment:3F215A125E52A9A89BD7502D77DB3743" httpUri="http://treatment.plazi.org/id/3F215A125E52A9A89BD7502D77DB3743" lastPageNumber="30" pageId="5" pageNumber="30">
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<taxonomicName LSID=" MB823835" authority="Tibpromma & K. D. Hyde" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="genus">Endopandanicola Tibpromma & K.D. Hyde</taxonomicName>
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<taxonomicNameLabel pageId="5" pageNumber="30">gen. nov.</taxonomicNameLabel>
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<treatment id="3F215A125E52A9A89BD7502D77DB3743" ID-GBIF-Taxon="142664151" LSID="urn:lsid:plazi:treatment:3F215A125E52A9A89BD7502D77DB3743" httpUri="http://treatment.plazi.org/id/3F215A125E52A9A89BD7502D77DB3743" lastPageNumber="30" pageId="5" pageNumber="30" scope_class="Agaricomycetes" scope_family="Polyporaceae" scope_order="Polyporales">
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<taxonomicName id="3D86E9BF3CCAC0B34ACE40F20E5A632E" ID-CoL="4BNW" ID-ENA="2259876" LSID=" MB823835" authority="Tibpromma & K. D. Hyde" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="genus">Endopandanicola Tibpromma & K.D. Hyde</taxonomicName>
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<taxonomicNameLabel id="81EB96C55711F699DAEAE8573612698A" pageId="5" pageNumber="30">gen. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="5" pageNumber="30" type="etymology">
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<paragraph pageId="5" pageNumber="30">Etymology.</paragraph>
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<paragraph id="5B3BD2F162C20998ACDD0DFA67D11BBB" pageId="5" pageNumber="30">Etymology.</paragraph>
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Named after its habitat as an endophyte of
|
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<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="5" pageNumber="30" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
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<taxonomicName id="3EBF878F8D7674F013F0C02CD6BA9192" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="5" pageNumber="30" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
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.
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</paragraph>
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<paragraph pageId="5" pageNumber="30">Type species.</paragraph>
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<paragraph pageId="5" pageNumber="30">
|
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<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola thailandica" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="species" species="thailandica">Endopandanicola thailandica</taxonomicName>
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<subSubSection id="A639A87584771271BC9BC607551ACA26" pageId="5" pageNumber="30" type="type species">
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<paragraph id="09C61E6FC37BBE69E1499B094B9D801D" pageId="5" pageNumber="30">Type species.</paragraph>
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<taxonomicName id="EEC35B2EDD63B6AF442ACA64A7F2B2E2" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola thailandica" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="species" species="thailandica">Endopandanicola thailandica</taxonomicName>
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Tibpromma & K.D. Hyde
|
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</paragraph>
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|
||||
<paragraph pageId="5" pageNumber="30">Culture characteristics.</paragraph>
|
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<taxonomicName genus="Colonies" lsidName="Colonies" pageId="5" pageNumber="30" rank="genus">Colonies</taxonomicName>
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<paragraph id="A342CA122C3CF8FA0A117946A98C53C6" pageId="5" pageNumber="30">Culture characteristics.</paragraph>
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<taxonomicName id="DAAF94A17D5A44DD35F388E164C6CDB4" genus="Colonies" lsidName="Colonies" pageId="5" pageNumber="30" rank="genus">Colonies</taxonomicName>
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on PDA (PE60), superficial, initially white, later becoming yellow-white, smooth at the surface, irregular, with undulate margin, flossy to velvety; reverse white to yellow-white. Generative hyphae simple-septate, branched, sub-hyaline, thin-walled.
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<paragraph pageId="5" pageNumber="30">Notes.</paragraph>
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<paragraph pageId="5" pageNumber="30">
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<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="genus">Endopandanicola</taxonomicName>
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<paragraph id="5EC491B25AEFCF85B99F2634A5DF04A8" pageId="5" pageNumber="30">Notes.</paragraph>
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<paragraph id="85A040477EAB6E8C4DC16C3EDE9A915D" pageId="5" pageNumber="30">
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<taxonomicName id="1331A0F12AF6B635CBD7B450F0ED3648" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="genus">Endopandanicola</taxonomicName>
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||||
formed a single, well-supported clade (100 % in ML, 100 % in MP), which is distinct as compared to other genera in
|
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<taxonomicName family="Polyporaceae" lsidName="Mycelium" pageId="5" pageNumber="30" rank="family">Polyporaceae</taxonomicName>
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<taxonomicName id="4035EBDBA4FB504E2369F008B73F1437" class="Agaricomycetes" family="Polyporaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="family">Polyporaceae</taxonomicName>
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||||
(Figure 3). This genus comprises resupinate or crust polypores that live inside leaves or wood as endophytes and do not form fruiting bodies (sexual morph), but form flat mycelia. More collections of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="5" pageNumber="30" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
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<taxonomicName id="35DB9E8784233BC8D034C1970D4169F8" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="5" pageNumber="30" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
are needed in the future to locate the sexual morph of
|
||||
<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="genus">Endopandanicola</taxonomicName>
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<taxonomicName id="EE0AA67ECEDC28B4F4170B7286B1001E" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="genus">Endopandanicola</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,118 +1,118 @@
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<treatment ID-GBIF-Taxon="142664166" LSID="urn:lsid:plazi:treatment:411170C878DB27449388D07014D32667" httpUri="http://treatment.plazi.org/id/411170C878DB27449388D07014D32667" lastPageId="5" lastPageNumber="29" pageId="4" pageNumber="29">
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<taxonomicName authority="Fr. ex Corda" family="Polyporaceae" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Mycelium" order="Polyporales" pageId="4" pageNumber="29" rank="family">Polyporaceae Fr. ex Corda</taxonomicName>
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<paragraph id="D9417997B45E62E6B7CD4456B4262F5B" lastPageId="5" lastPageNumber="30" pageId="4" pageNumber="29">
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The family
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<taxonomicName id="FD5714B7C85C58D9F723298F7814488E" class="Agaricomycetes" family="Polyporaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Polyporales" pageId="4" pageNumber="29" phylum="Basidiomycota" rank="family">Polyporaceae</taxonomicName>
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was introduced by Fr. ex Corda (1839) and includes 92 genera and 636 species (
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<bibRefCitation pageId="4" pageNumber="29">Kirk et al. 2008</bibRefCitation>
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<bibRefCitation id="E6C4C1EA7A37DD3B9A00B6C7B370EBED" pageId="4" pageNumber="29">Kirk et al. 2008</bibRefCitation>
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). According to
|
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<bibRefCitation author="Cannon, PF" journalOrPublisher="Systema Ascomycetum" pageId="27" pageNumber="52" url="https://doi.org/10.1079/9780851998275.0000" year="2007">Cannon and Kirk (2007)</bibRefCitation>
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<bibRefCitation id="4E1F4C9557182375588F67149D72ECD0" author="Cannon, PF" journalOrPublisher="Systema Ascomycetum" pageId="27" pageNumber="52" url="https://doi.org/10.1079/9780851998275.0000" year="2007">Cannon and Kirk (2007)</bibRefCitation>
|
||||
, the species in this family are characterised by poroid, irregular or lamellate hymenophores and are saprobes. Recent phylogenetic analyses of
|
||||
<taxonomicName family="Polyporaceae" lsidName="Mycelium" pageId="4" pageNumber="29" rank="family">Polyporaceae</taxonomicName>
|
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<taxonomicName id="3B52874C8C494E2672FAB4A015CFD39A" class="Agaricomycetes" family="Polyporaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Polyporales" pageId="4" pageNumber="29" phylum="Basidiomycota" rank="family">Polyporaceae</taxonomicName>
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are by Binder
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al. (2013) and
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<bibRefCitation author="Hyde, KD" journalOrPublisher="Fungal Diversity" pageId="30" pageNumber="55" pagination="1 - 235" title="Fungal diversity notes 603 - 708: taxonomic and phylogenetic notes on genera and species." url="https://doi.org/10.1007/s13225-017-0391-3" volume="87" year="2017">Hyde et al. (2017)</bibRefCitation>
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<bibRefCitation id="290C7F45C30B3A82E73291FA36A0773C" author="Hyde, KD" journalOrPublisher="Fungal Diversity" pageId="30" pageNumber="55" pagination="1 - 235" title="Fungal diversity notes 603 - 708: taxonomic and phylogenetic notes on genera and species." url="https://doi.org/10.1007/s13225-017-0391-3" volume="87" year="2017">Hyde et al. (2017)</bibRefCitation>
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. In this study, a new endophytic genus,
|
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<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="genus">Endopandanicola</taxonomicName>
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<taxonomicName id="E3F3A2DB30A7B8F0B1C8ED7664C0319E" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="genus">Endopandanicola</taxonomicName>
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with
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<taxonomicName lsidName="En. thailandica" pageId="5" pageNumber="30" rank="species" species="thailandica">En. thailandica</taxonomicName>
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as the type species was discovered. In addition to the new genus,
|
||||
<taxonomicName class="Agaricomycetes" family="Phanerochaetaceae" genus="Phanerochaete" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phanerochaete chrysosporium" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="species" species="chrysosporium">Phanerochaete chrysosporium</taxonomicName>
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<taxonomicName id="5ABA5B069EA017976B3E96D85A59A2CE" class="Agaricomycetes" family="Phanerochaetaceae" genus="Phanerochaete" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phanerochaete chrysosporium" order="Polyporales" pageId="5" pageNumber="30" phylum="Basidiomycota" rank="species" species="chrysosporium">Phanerochaete chrysosporium</taxonomicName>
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was also identified.
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||||
|
|
|
|||
|
|
@ -1,123 +1,123 @@
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|||
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<treatment ID-GBIF-Taxon="142664195" LSID="urn:lsid:plazi:treatment:611218841386AA02302A637FFB5FD637" httpUri="http://treatment.plazi.org/id/611218841386AA02302A637FFB5FD637" lastPageNumber="41" pageId="16" pageNumber="41">
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<subSubSection pageId="16" pageNumber="41" type="nomenclature">
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<paragraph pageId="16" pageNumber="41">
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||||
<taxonomicName authority="Udayanga, X. Z. Liu & K. D. Hyde, 2012" authorityName="Udayanga, X. Z. Liu & K. D. Hyde" authorityYear="2012" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe siamensis" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="siamensis">Diaporthe siamensis Udayanga, X.Z. Liu & K.D. Hyde, 2012</taxonomicName>
|
||||
<treatment id="611218841386AA02302A637FFB5FD637" ID-GBIF-Taxon="142664195" LSID="urn:lsid:plazi:treatment:611218841386AA02302A637FFB5FD637" httpUri="http://treatment.plazi.org/id/611218841386AA02302A637FFB5FD637" lastPageNumber="41" pageId="16" pageNumber="41" scope_family="Diaporthaceae" scope_order="Diaporthales" scope_phylum="Ascomycota">
|
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<subSubSection id="BA94E4AE090C357888E4DAD89299E093" pageId="16" pageNumber="41" type="nomenclature">
|
||||
<paragraph id="2D7DDD5398B1BDDABBDFE5AA49FD4608" pageId="16" pageNumber="41">
|
||||
<taxonomicName id="1D76D032C17A9A3895199F7BE98BA33F" ID-CoL="35D7L" authority="Udayanga, X. Z. Liu & K. D. Hyde, 2012" authorityName="Udayanga, X. Z. Liu & K. D. Hyde" authorityYear="2012" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe siamensis" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="siamensis">Diaporthe siamensis Udayanga, X.Z. Liu & K.D. Hyde, 2012</taxonomicName>
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="description">
|
||||
<paragraph pageId="16" pageNumber="41">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="16" pageNumber="41" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="F035200F0FDA86DB8562A566C8781CE3" pageId="16" pageNumber="41" type="description">
|
||||
<paragraph id="01D1D6C773C8CD4A6F43901365D22205" pageId="16" pageNumber="41">Culture characteristics.</paragraph>
|
||||
<paragraph id="C0AC7F5ACB2FAD25A3BFF51DC8ABE4D6" pageId="16" pageNumber="41">
|
||||
<taxonomicName id="4D66C5D4F82CB768B617FB2ECD6EB4A2" genus="Colonies" lsidName="Colonies" pageId="16" pageNumber="41" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, PE37), superficial, white to yellow-white, irregular, curled and raised on media surface, flossy; under surfaceyellow-white.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="genbank numbers">
|
||||
<paragraph pageId="16" pageNumber="41">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<subSubSection id="9425DC5A75E70AD9CF0350AE024A99D6" pageId="16" pageNumber="41" type="genbank numbers">
|
||||
<paragraph id="52D3FF60D4514371A8BBEA3E58A067DE" pageId="16" pageNumber="41">GenBank numbers.</paragraph>
|
||||
<paragraph id="D164B28A43B10978399DC9D2D8FB5004" pageId="16" pageNumber="41">
|
||||
ITS=MG646975, TEF1=MG646989,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="CA6F90C2CCD1434C5A8585EAF34ACE98" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
=MG646925, ACT=MG646940.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="notes">
|
||||
<paragraph pageId="16" pageNumber="41">Notes.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<subSubSection id="47EEABA089B011F43496AF19FA059950" pageId="16" pageNumber="41" type="notes">
|
||||
<paragraph id="D2A116CB857E25314E28C4394BC51BEF" pageId="16" pageNumber="41">Notes.</paragraph>
|
||||
<paragraph id="A8E05BF0A8F47D77EB74B627BD58E876" pageId="16" pageNumber="41">
|
||||
In the phylogenetic analysis, the
|
||||
<normalizedToken originalValue="authors’">authors'</normalizedToken>
|
||||
<normalizedToken id="8D05FE482C59427D481803DA28D335F6" originalValue="authors’">authors'</normalizedToken>
|
||||
collection grouped with
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe siamensis" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="siamensis">Diaporthe siamensis</taxonomicName>
|
||||
<taxonomicName id="97782F41521E7029E2D0CAACF9759426" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe siamensis" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="siamensis">Diaporthe siamensis</taxonomicName>
|
||||
MFLUCC 10-0573 with high statistical values of 100% in ML and 1.00 in PP.
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe siamensis" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="siamensis">Diaporthe siamensis</taxonomicName>
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<taxonomicName id="A6ACC9D1A767CBE2B3EE487B80C42C5E" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe siamensis" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="siamensis">Diaporthe siamensis</taxonomicName>
|
||||
is an endophytic fungus collected from a
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="16" pageNumber="41" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="D3347FD8797EE4DCF96FDC1E6FC6CEF2" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
host in Thailand.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,181 +1,181 @@
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<mods:date>2018</mods:date>
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<mods:date id="E06EE7B4F444D526052472DC88F754EF">2018</mods:date>
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<mods:number id="741AEBC5F9B03635DE5A7F49817E16AF">33</mods:number>
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<treatment ID-GBIF-Taxon="142664191" LSID="urn:lsid:plazi:treatment:668B9293F7428F9E1E34677271A6025F" httpUri="http://treatment.plazi.org/id/668B9293F7428F9E1E34677271A6025F" lastPageId="20" lastPageNumber="45" pageId="18" pageNumber="43">
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<subSubSection pageId="18" pageNumber="43" type="nomenclature">
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<paragraph pageId="18" pageNumber="43">
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<taxonomicName LSID=" MB823841" authority="Tibpromma & K. D. Hyde" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum pandanicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="pandanicola">Colletotrichum pandanicola Tibpromma & K.D. Hyde</taxonomicName>
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<taxonomicNameLabel pageId="18" pageNumber="43">sp. nov.</taxonomicNameLabel>
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<treatment id="668B9293F7428F9E1E34677271A6025F" ID-GBIF-Taxon="142664191" LSID="urn:lsid:plazi:treatment:668B9293F7428F9E1E34677271A6025F" httpUri="http://treatment.plazi.org/id/668B9293F7428F9E1E34677271A6025F" lastPageId="20" lastPageNumber="45" pageId="18" pageNumber="43" scope_family="Glomerellaceae" scope_order="Diaporthales" scope_phylum="Ascomycota">
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<subSubSection id="36CEF3B00568CA5D3100053C8978E293" pageId="18" pageNumber="43" type="nomenclature">
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<paragraph id="8BF20CE58FD12444F67FD349990EB445" pageId="18" pageNumber="43">
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<taxonomicName id="8E5C03642801AFA695653148330D3B0A" ID-CoL="X43F" LSID=" MB823841" authority="Tibpromma & K. D. Hyde" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum pandanicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="pandanicola">Colletotrichum pandanicola Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel id="218E3EAB66BBACD83AC26149354BBC89" pageId="18" pageNumber="43">sp. nov.</taxonomicNameLabel>
|
||||
Figure 15
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="19" pageNumber="44" type="etymology">
|
||||
<paragraph pageId="19" pageNumber="44">
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<pageBreakToken pageId="19" pageNumber="44" start="start">Etymology</pageBreakToken>
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<paragraph id="5367892B5EF90D5122024CF6B45C2048" pageId="19" pageNumber="44">
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<pageBreakToken id="FFF17D67B56EB850572F3E54BEFB1D46" pageId="19" pageNumber="44" start="start">Etymology</pageBreakToken>
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.
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||||
</paragraph>
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<paragraph pageId="19" pageNumber="44">
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||||
<paragraph id="24ED5BB88FDAEC9126C22D12189C6397" pageId="19" pageNumber="44">
|
||||
name referring to the host genus (
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="19" pageNumber="44" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
<taxonomicName id="918C96BC63347AF9DEEABFC4B53B07DE" class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="19" pageNumber="44" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
).
|
||||
</paragraph>
|
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</subSubSection>
|
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<subSubSection pageId="19" pageNumber="44" type="holotype">
|
||||
<paragraph pageId="19" pageNumber="44">Holotype.</paragraph>
|
||||
<paragraph pageId="19" pageNumber="44">MFLU 18-0003</paragraph>
|
||||
<subSubSection id="62FE51A604E006246692E2804EEC13DF" pageId="19" pageNumber="44" type="holotype">
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<paragraph id="2F34E2976E9862FF008D7C4E63424CA6" pageId="19" pageNumber="44">Holotype.</paragraph>
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<paragraph id="2C058C15F19403E12C925BD19E3CF6E7" pageId="19" pageNumber="44">MFLU 18-0003</paragraph>
|
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</subSubSection>
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<subSubSection pageId="19" pageNumber="44" type="description">
|
||||
<paragraph pageId="19" pageNumber="44">Description.</paragraph>
|
||||
<paragraph pageId="19" pageNumber="44">
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||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="19" pageNumber="44" rank="genus">Colonies</taxonomicName>
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<subSubSection id="DA2EE3E8AAE0BF147E77F8F1BC7A2D42" pageId="19" pageNumber="44" type="description">
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<paragraph id="8933E45BDB644B7E00AFA5906EB6A02B" pageId="19" pageNumber="44">Description.</paragraph>
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<paragraph id="8F36805AADD49A123C158CA0C439CFF8" pageId="19" pageNumber="44">
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<taxonomicName id="73ECB2BC8CEBA9B30146DEED5C211BDA" genus="Colonies" lsidName="Colonies" pageId="19" pageNumber="44" rank="genus">Colonies</taxonomicName>
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||||
on PDA attaining 9 cm diam. in 7 days at room temperature, dark-grey. Sexual morph Undetermined. Asexual morph
|
||||
<taxonomicName genus="Conidiophores" lsidName="Conidiophores" pageId="19" pageNumber="44" rank="genus">Conidiophores</taxonomicName>
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<taxonomicName id="3F608FF17BEA05CE7D85DA3F5E53738B" genus="Conidiophores" lsidName="Conidiophores" pageId="19" pageNumber="44" rank="genus">Conidiophores</taxonomicName>
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||||
hyaline, smooth-walled, cylindrical to slightly inflated.
|
||||
<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="19" pageNumber="44" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
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<taxonomicName id="9A81E8BBB0DF63D97CA8D7C84A110BA5" genus="Conidia" lsidName="Conidia" pageId="19" pageNumber="44" rank="genus">Conidia</taxonomicName>
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9-18
|
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<normalizedToken originalValue="µm">µm</normalizedToken>
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<normalizedToken id="8AA07CF0C8E38A2F4046AFD4E967009D" originalValue="µm">µm</normalizedToken>
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high, 4-8
|
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<normalizedToken originalValue="µm">µm</normalizedToken>
|
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<normalizedToken id="9B53D0F9B8C6CB8F3918B0D5E68967FB" originalValue="µm">µm</normalizedToken>
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diam. (= 13.39
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<normalizedToken originalValue="×">x</normalizedToken>
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<normalizedToken id="80A02141E7EFE837A776338F3F20F7AD" originalValue="×">x</normalizedToken>
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5.35
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<normalizedToken originalValue="µm">µm</normalizedToken>
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<normalizedToken id="847BF946BE89B31B1CC6459FB10C7B5C" originalValue="µm">µm</normalizedToken>
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, n = 20), hyaline, cylindrical with rounded ends tapering slightly towards the base, smooth, septate, guttulate.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="19" pageNumber="44" type="description">
|
||||
<paragraph pageId="19" pageNumber="44">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="19" pageNumber="44">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="19" pageNumber="44" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="17031E6383A143C96A2B6D81C6E5FDCA" pageId="19" pageNumber="44" type="description">
|
||||
<paragraph id="8317A932CD9BE7CAC39FF2C0B5EAC014" pageId="19" pageNumber="44">Culture characteristics.</paragraph>
|
||||
<paragraph id="B54FB44DACF9DDA3670F1BE739FAF041" pageId="19" pageNumber="44">
|
||||
<taxonomicName id="6EED162F6EEFF857777C7D96A435320C" genus="Colonies" lsidName="Colonies" pageId="19" pageNumber="44" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, PE09), superficial, white in the beginning and later becoming dark-grey, circular, entire edge, smooth, flossy, velvety and raised on surface media; reverse dark. Sporulating in culture after 1 month.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="20" pageNumber="45" type="materials_examined">
|
||||
<paragraph pageId="20" pageNumber="45">
|
||||
<pageBreakToken pageId="20" pageNumber="45" start="start">Material</pageBreakToken>
|
||||
<subSubSection id="C9CA368811FBB7F128C13B3B873BFEC9" pageId="20" pageNumber="45" type="materials_examined">
|
||||
<paragraph id="ED6F251D87E22B8008CA90EB7FD6A5F1" pageId="20" pageNumber="45">
|
||||
<pageBreakToken id="A51E6E6413B64B55E35BFFB510816DF0" pageId="20" pageNumber="45" start="start">Material</pageBreakToken>
|
||||
examined.
|
||||
</paragraph>
|
||||
<paragraph pageId="20" pageNumber="45">
|
||||
<paragraph id="E3800113D42A1B645C259E2078BFDDAA" pageId="20" pageNumber="45">
|
||||
THAILAND, Chumphon, Pathio District, on healthy leaves of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="20" pageNumber="45" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="CA5C41C4E505C641705E5CA8A68B5619" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="20" pageNumber="45" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. (
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="20" pageNumber="45" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="4D732C8E0AD33A25FDC3B0AD8E2E96C0" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="20" pageNumber="45" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
), 1 December 2016, S. Tibpromma PE09 (MFLU 18-0003, holotype); GZAAS 16-0145, paratype, ex-type living cultures, MFLUCC 17-0571.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="20" pageNumber="45" type="genbank numbers">
|
||||
<paragraph pageId="20" pageNumber="45">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="20" pageNumber="45">
|
||||
<subSubSection id="E44E4794332D61CA2B22A390C8F4CF2D" pageId="20" pageNumber="45" type="genbank numbers">
|
||||
<paragraph id="974EEBC69BF0A26CDEBA6C08EAF2E09C" pageId="20" pageNumber="45">GenBank numbers.</paragraph>
|
||||
<paragraph id="83463AA3DF5C69FCFB6B8FA3286BD25C" pageId="20" pageNumber="45">
|
||||
ITS=MG646967,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="DD9DC932FD2760C3078E6D64CCB29B28" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
=MG646926, GAPDH= MG646931, CHS-1=MG646935, ACT=MG646938.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="20" pageNumber="45" type="notes">
|
||||
<paragraph pageId="20" pageNumber="45">Notes.</paragraph>
|
||||
<paragraph pageId="20" pageNumber="45">
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum pandanicola" order="Glomerellales" pageId="20" pageNumber="45" phylum="Ascomycota" rank="species" species="pandanicola">Colletotrichum pandanicola</taxonomicName>
|
||||
<subSubSection id="5B9F82F4FF1508B2D8710AD730127609" pageId="20" pageNumber="45" type="notes">
|
||||
<paragraph id="BEA1FB8722FC57322B9F5803168A57EA" pageId="20" pageNumber="45">Notes.</paragraph>
|
||||
<paragraph id="E6427B5FF34FE14E34948113279220D6" pageId="20" pageNumber="45">
|
||||
<taxonomicName id="710BDA19F819883E6E8F2BE3930169FE" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum pandanicola" order="Glomerellales" pageId="20" pageNumber="45" phylum="Ascomycota" rank="species" species="pandanicola">Colletotrichum pandanicola</taxonomicName>
|
||||
is introduced here as a new species in the
|
||||
<taxonomicName genus="Mycelium" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Mycelium gloeosporioides" pageId="20" pageNumber="45" phylum="Basidiomycota" rank="species" species="gloeosporioides">gloeosporioides</taxonomicName>
|
||||
<taxonomicName id="2B71A635EC704A6AF38C7763BF62A327" genus="Mycelium" lsidName="Mycelium gloeosporioides" pageId="20" pageNumber="45" rank="species" species="gloeosporioides">gloeosporioides</taxonomicName>
|
||||
species complex based on morphological and phylogenetic data. The phylogenetic analysis shows that this new taxon is well-separated from other known
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Botryosphaeriales" pageId="20" pageNumber="45" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
|
||||
<taxonomicName id="0727E381AA8EA64E02397A87FB3E33D5" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum" order="Botryosphaeriales" pageId="20" pageNumber="45" phylum="Ascomycota" rank="genus">Colletotrichum</taxonomicName>
|
||||
species (Figure 14). The authors also compared nucleotides of
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="93E33C591BFB1E230ADE317A547A1C0C" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
, GAPDH, CHS-1 and ACT and found that there are differences between
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum tropicale" order="Glomerellales" pageId="20" pageNumber="45" phylum="Ascomycota" rank="species" species="tropicale">Colletotrichum tropicale</taxonomicName>
|
||||
<taxonomicName id="76781DDE32645EA240790FCBF948360B" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum tropicale" order="Glomerellales" pageId="20" pageNumber="45" phylum="Ascomycota" rank="species" species="tropicale">Colletotrichum tropicale</taxonomicName>
|
||||
and this new species (β-tubulin 7 bp, GAPDH 11 bp, CHS-1 7 bp and ACT 3 bp).
|
||||
</paragraph>
|
||||
<caption pageId="20" pageNumber="45">
|
||||
<paragraph pageId="20" pageNumber="45">
|
||||
<caption id="9671910878D63AE9BDD0C66A6BFC1847" pageId="20" pageNumber="45">
|
||||
<paragraph id="45FEA4DFBADC877A0BA712B321B549CB" pageId="20" pageNumber="45">
|
||||
Figure 14. Phylogram generated from maximum likelihood analysis based on combined ITS, Actin,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="568405CDC05435B99AEF6AC1355C281B" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
, GADPH and CHS-1 sequenced data. Maximum likelihood (left) and Bayesian inference (right) bootstrap values are given above/below the nodes. The newly generated sequences are in red text. The tree is rooted with
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum truncatum" order="Glomerellales" pageId="20" pageNumber="45" phylum="Ascomycota" rank="species" species="truncatum">Colletotrichum truncatum</taxonomicName>
|
||||
<taxonomicName id="45A71A08B2FA68C4B24FCDDFD7E37DEE" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum truncatum" order="Glomerellales" pageId="20" pageNumber="45" phylum="Ascomycota" rank="species" species="truncatum">Colletotrichum truncatum</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
|
|
@ -1,164 +1,164 @@
|
|||
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<treatment ID-GBIF-Taxon="142664165" LSID="urn:lsid:plazi:treatment:6B0036C662EF53EDB6ACE5936BFD0234" httpUri="http://treatment.plazi.org/id/6B0036C662EF53EDB6ACE5936BFD0234" lastPageId="7" lastPageNumber="32" pageId="6" pageNumber="31">
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<subSubSection pageId="6" pageNumber="31" type="nomenclature">
|
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<paragraph pageId="6" pageNumber="31">
|
||||
<taxonomicName LSID=" MB823836" authority="Tibpromma & K. D. Hyde" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola thailandica" order="Polyporales" pageId="6" pageNumber="31" phylum="Basidiomycota" rank="species" species="thailandica">
|
||||
<pageBreakToken pageId="6" pageNumber="31" start="start">Endopandanicola</pageBreakToken>
|
||||
<treatment id="6B0036C662EF53EDB6ACE5936BFD0234" ID-GBIF-Taxon="142664165" LSID="urn:lsid:plazi:treatment:6B0036C662EF53EDB6ACE5936BFD0234" httpUri="http://treatment.plazi.org/id/6B0036C662EF53EDB6ACE5936BFD0234" lastPageId="7" lastPageNumber="32" pageId="6" pageNumber="31" scope_class="Agaricomycetes" scope_family="Polyporaceae" scope_order="Polyporales">
|
||||
<subSubSection id="45202AE7BF16E833C160BEFEF704DCAD" pageId="6" pageNumber="31" type="nomenclature">
|
||||
<paragraph id="DAC818E996A29EBD9E0745C7A499A1AB" pageId="6" pageNumber="31">
|
||||
<taxonomicName id="CEA94C6CCD2776E26B439632E10C4A77" ID-CoL="39S36" LSID=" MB823836" authority="Tibpromma & K. D. Hyde" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola thailandica" order="Polyporales" pageId="6" pageNumber="31" phylum="Basidiomycota" rank="species" species="thailandica">
|
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<pageBreakToken id="158030E55EC89C9FDB8E5A6EC7C7372E" pageId="6" pageNumber="31" start="start">Endopandanicola</pageBreakToken>
|
||||
thailandica Tibpromma & K.D. Hyde
|
||||
</taxonomicName>
|
||||
<taxonomicNameLabel pageId="6" pageNumber="31">sp. nov.</taxonomicNameLabel>
|
||||
<taxonomicNameLabel id="ADC06D8DE057C93E4993DE15A3AA803F" pageId="6" pageNumber="31">sp. nov.</taxonomicNameLabel>
|
||||
Figure 4
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="6" pageNumber="31" type="etymology">
|
||||
<paragraph pageId="6" pageNumber="31">Etymology.</paragraph>
|
||||
<paragraph pageId="6" pageNumber="31">named after Thailand, the country where the fungus was first discovered.</paragraph>
|
||||
<subSubSection id="A37584ED8A7DBBA12782B4E47EAE9950" pageId="6" pageNumber="31" type="etymology">
|
||||
<paragraph id="133E255EF932CC729B5E1EF442F79761" pageId="6" pageNumber="31">Etymology.</paragraph>
|
||||
<paragraph id="7DFEA0312B78E3BF341C27115D9823A9" pageId="6" pageNumber="31">named after Thailand, the country where the fungus was first discovered.</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="6" pageNumber="31" type="holotype">
|
||||
<paragraph pageId="6" pageNumber="31">Holotype.</paragraph>
|
||||
<paragraph pageId="6" pageNumber="31">MFLU 18-0021</paragraph>
|
||||
<subSubSection id="9AA912F934A62294F8A3823694998F6A" pageId="6" pageNumber="31" type="holotype">
|
||||
<paragraph id="BCED2553D1E4D4D52BE4C1CB267DC7E8" pageId="6" pageNumber="31">Holotype.</paragraph>
|
||||
<paragraph id="79F004DE8AF0D08B7D7DD69C0B947251" pageId="6" pageNumber="31">MFLU 18-0021</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="6" pageNumber="31" type="description">
|
||||
<paragraph pageId="6" pageNumber="31">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="6" pageNumber="31">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="6" pageNumber="31" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="38239469DB4287ACF3F579827625149C" pageId="6" pageNumber="31" type="description">
|
||||
<paragraph id="97260358207C51501D904EBEEE6A7059" pageId="6" pageNumber="31">Culture characteristics.</paragraph>
|
||||
<paragraph id="DCC442394B30AF5C54AFD907A7627475" pageId="6" pageNumber="31">
|
||||
<taxonomicName id="D3FF098C8EFE95A224CA9152E9746AF6" genus="Colonies" lsidName="Colonies" pageId="6" pageNumber="31" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2 PE10, FE42, FE43, FE46 and PE60), superficial, initially white, later becoming yellow-white, irregular, with undulate margin, smooth with flossy to velvety; reverse white to yellow-white. Generative hyphae simple-septate, branched, with clamp connections, sub-hyaline, thin-walled, 1.5-3.5
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="D10717AE76B74E445470B71A51F26D8B" originalValue="µm">µm</normalizedToken>
|
||||
wide.
|
||||
</paragraph>
|
||||
<caption pageId="6" pageNumber="31">
|
||||
<paragraph pageId="6" pageNumber="31">Figure 2. All cultures from this study are grown on PDA at room temperature after 7 days (original codes are written at the bottom of each picture).</paragraph>
|
||||
<caption id="9E470B7BC38D20A79D17B67CD63B3CBD" pageId="6" pageNumber="31">
|
||||
<paragraph id="FA03BED216549F1B6A7420327231FA62" pageId="6" pageNumber="31">Figure 2. All cultures from this study are grown on PDA at room temperature after 7 days (original codes are written at the bottom of each picture).</paragraph>
|
||||
</caption>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="6" pageNumber="31" type="materials_examined">
|
||||
<paragraph pageId="6" pageNumber="31">Material examined.</paragraph>
|
||||
<paragraph pageId="6" pageNumber="31">
|
||||
<subSubSection id="4560C912F1C0C19D191EB21137D83E49" pageId="6" pageNumber="31" type="materials_examined">
|
||||
<paragraph id="DE012B7740BBF14F96BBDB5904479827" pageId="6" pageNumber="31">Material examined.</paragraph>
|
||||
<paragraph id="94B8EE321BC16A8163FBAAE7EC448825" pageId="6" pageNumber="31">
|
||||
THAILAND, Chumphon, Pathio District, on healthy leaves of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="6" pageNumber="31" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="9720F2A0204519F9499933E06BAB5C45" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="6" pageNumber="31" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. (
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="6" pageNumber="31" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="2277FDA09121D82330455E344E2BBF3B" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="6" pageNumber="31" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
), 1 December 2016, S. Tibpromma PE60 (MFLU 18-0021, holotype); HKAS100856, paratype, ex-type living cultures, MFLUCC 17-0600 = KUMCC 17-0295; Chumphon, Pathio District, 1 December 2016, S. Tibpromma PE10, living culture, MFLUCC 17-0572; Ranong, Muang, Muang District, 3 December 2016, S. Tibpromma FE42, living culture, MFLUCC 17-0548; FE43, living culture, MFLUCC 17-0549 = KUMCC 17-0264; FE46, living culture, MFLUCC 17-0551 = KUMCC 17-0265.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="6" pageNumber="31" type="genbank numbers">
|
||||
<paragraph pageId="6" pageNumber="31">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="6" pageNumber="31">ITS; MFLUCC 17-0545=MG646961, MFLUCC 17-0548=MG646964, MFLUCC 17-0549=MG646963, MFLUCC 17-0551=MG646962, MFLUCC 17-0572=MG646959, MFLUCC 17-0600=MG646960.</paragraph>
|
||||
<subSubSection id="113EAAB426388D20D99A10D917B88120" pageId="6" pageNumber="31" type="genbank numbers">
|
||||
<paragraph id="E36561A2274ED9BDD1B71B385214607C" pageId="6" pageNumber="31">GenBank numbers.</paragraph>
|
||||
<paragraph id="44C4AA916AC228B33754C93615483113" pageId="6" pageNumber="31">ITS; MFLUCC 17-0545=MG646961, MFLUCC 17-0548=MG646964, MFLUCC 17-0549=MG646963, MFLUCC 17-0551=MG646962, MFLUCC 17-0572=MG646959, MFLUCC 17-0600=MG646960.</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="7" pageNumber="32" type="notes">
|
||||
<paragraph pageId="7" pageNumber="32">
|
||||
<pageBreakToken pageId="7" pageNumber="32" start="start">Notes</pageBreakToken>
|
||||
<subSubSection id="ADD38414AD9C7E5FCE805060EED41AFC" pageId="7" pageNumber="32" type="notes">
|
||||
<paragraph id="2F6E6AEDF8E5723E44473D5E04A9B1A0" pageId="7" pageNumber="32">
|
||||
<pageBreakToken id="5B27AC19AEFD354F84E7FEF9451088B4" pageId="7" pageNumber="32" start="start">Notes</pageBreakToken>
|
||||
.
|
||||
</paragraph>
|
||||
<paragraph pageId="7" pageNumber="32">
|
||||
<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="genus">Endopandanicola</taxonomicName>
|
||||
<paragraph id="1AA98E09E54C2EE64F9C7AD6995F3A2A" pageId="7" pageNumber="32">
|
||||
<taxonomicName id="6327861CC748B4F5950280E07888020E" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="genus">Endopandanicola</taxonomicName>
|
||||
is introduced and typified by
|
||||
<taxonomicName lsidName="En. thailandica" pageId="7" pageNumber="32" rank="species" species="thailandica">En. thailandica</taxonomicName>
|
||||
<taxonomicName id="7EFAF6C065A3E121B174B1F6AD5618C9" lsidName="En. thailandica" pageId="7" pageNumber="32" rank="species" species="thailandica">En. thailandica</taxonomicName>
|
||||
which is represented by six isolates and is described as a novel species based on its asexual morph. The phylogenetic analysis of ITS sequence data showed that this species clustered together with
|
||||
<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Panus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Panus" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="genus">Panus</taxonomicName>
|
||||
<taxonomicName id="A167ECDEFC4EF726A81504E1520FF016" class="Agaricomycetes" family="Polyporaceae" genus="Panus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Panus" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="genus">Panus</taxonomicName>
|
||||
, but there is a high level of statistical support for its separation (100% in ML, 100% in MP) (Figure 3).
|
||||
</paragraph>
|
||||
<caption pageId="7" pageNumber="32">
|
||||
<paragraph pageId="7" pageNumber="32">
|
||||
<caption id="E3773C3D11039703BBEFD1B1731EECF7" pageId="7" pageNumber="32">
|
||||
<paragraph id="30C84E1A23316EBA567BC1838992B623" pageId="7" pageNumber="32">
|
||||
Figure 3. Phylogram generated from maximum likelihood analysis based on ITS sequence data. Maximum parsimony (left) and maximum likelihood (right) bootstrap support values are given above/below the nodes. The newly generated sequences are in red text. The tree is rooted with
|
||||
<taxonomicName class="Agaricomycetes" family="Meruliaceae" genus="Pirex" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pirex concentricus" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="concentricus">Pirex concentricus</taxonomicName>
|
||||
<taxonomicName id="1E3513A20D3F081CB1C14EF648745EFF" class="Agaricomycetes" family="Meruliaceae" genus="Pirex" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pirex concentricus" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="concentricus">Pirex concentricus</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
<caption pageId="7" pageNumber="32">
|
||||
<paragraph pageId="7" pageNumber="32">
|
||||
<caption id="C130D8A7E259C46DC83272C4306D03AC" pageId="7" pageNumber="32">
|
||||
<paragraph id="6F9B4F26F1D257E0E5B15941422255F0" pageId="7" pageNumber="32">
|
||||
Figure 4.
|
||||
<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola thailandica" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="thailandica">Endopandanicola thailandica</taxonomicName>
|
||||
<taxonomicName id="8015BA26FED0B780C7BB05ED87C8F1DB" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola thailandica" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="thailandica">Endopandanicola thailandica</taxonomicName>
|
||||
(MFLU 18-0021, holotype). a Mycelia masses b, c Clamp connections. Scale bars: 10
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="5F75C45EB34D6B6645DDE160ECE6C3D7" originalValue="μm">μm</normalizedToken>
|
||||
(a), 5
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="B14F4241E54A16669A35C92B6E5C4BE2" originalValue="μm">μm</normalizedToken>
|
||||
(b, c).
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
|
|
@ -1,191 +1,191 @@
|
|||
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<mods:namePart>Bhat, Jayarama D.</mods:namePart>
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<mods:namePart>Xu, Jianchu</mods:namePart>
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<mods:namePart id="3C88B172CA926DA7E5000394F71A8B64">Xu, Jianchu</mods:namePart>
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<mods:namePart>Promputtha, Itthayakorn</mods:namePart>
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<mods:namePart>Yang, Jun-Bo</mods:namePart>
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<mods:namePart>Tang, Alvin M. C.</mods:namePart>
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<mods:namePart>Karunarathna, Samantha C.</mods:namePart>
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<mods:namePart id="7147EC0A28DED834396E0C6F4E19AC7B">Karunarathna, Samantha C.</mods:namePart>
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<mods:title id="10723C92C82D7D86F2362331557332CB">MycoKeys</mods:title>
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<mods:part>
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<mods:date>2018</mods:date>
|
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<mods:detail type="volume">
|
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<mods:number>33</mods:number>
|
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<mods:part id="76C0E1BF750D24F32215D796A7A483AF">
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<mods:date id="CFAE7DFC192B3C50E7245D7B1DF63E89">2018</mods:date>
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<mods:detail id="2CD53C91BD72C531BF425E31C4FBEA8D" type="volume">
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<mods:number id="69CB4B88BF49F62D79230FBFF6995826">33</mods:number>
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<mods:extent unit="page">
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<mods:start>25</mods:start>
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<mods:start id="FCAFDBE626CB6F15E8BF89E4D218E8DE">25</mods:start>
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<mods:end id="8491BD2B6C750E28696665F8A211D632">67</mods:end>
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<mods:identifier id="8D707A11C3D9B0CB877F60C4C1E7CA5D" type="Pensoft-Pub">1314-4049-33-25</mods:identifier>
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<treatment ID-GBIF-Taxon="142664187" LSID="urn:lsid:plazi:treatment:6E51AF2B7B605980E6ADA0D1DC7576C2" httpUri="http://treatment.plazi.org/id/6E51AF2B7B605980E6ADA0D1DC7576C2" lastPageId="22" lastPageNumber="47" pageId="21" pageNumber="46">
|
||||
<subSubSection pageId="21" pageNumber="46" type="nomenclature">
|
||||
<paragraph pageId="21" pageNumber="46">
|
||||
<taxonomicName LSID=" MB823842" authority="Tibpromma & K. D. Hyde" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="21" pageNumber="46" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel pageId="21" pageNumber="46">sp. nov.</taxonomicNameLabel>
|
||||
<treatment id="6E51AF2B7B605980E6ADA0D1DC7576C2" ID-GBIF-Taxon="142664187" LSID="urn:lsid:plazi:treatment:6E51AF2B7B605980E6ADA0D1DC7576C2" httpUri="http://treatment.plazi.org/id/6E51AF2B7B605980E6ADA0D1DC7576C2" lastPageId="22" lastPageNumber="47" pageId="21" pageNumber="46" scope_family="Glomerellaceae" scope_order="Diaporthales" scope_phylum="Ascomycota">
|
||||
<subSubSection id="045ADDA897FDE25D0DEBBFDD4259250F" pageId="21" pageNumber="46" type="nomenclature">
|
||||
<paragraph id="CDA38F6FE8F77249E986605A9B0E48B6" pageId="21" pageNumber="46">
|
||||
<taxonomicName id="51D51BCFC4E64C902FD19040CFE4B1FF" ID-CoL="73S98" LSID=" MB823842" authority="Tibpromma & K. D. Hyde" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="21" pageNumber="46" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel id="8C0F9648166C5158B0660B08691DD9D0" pageId="21" pageNumber="46">sp. nov.</taxonomicNameLabel>
|
||||
Figure 17
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="21" pageNumber="46" type="etymology">
|
||||
<paragraph pageId="21" pageNumber="46">Etymology.</paragraph>
|
||||
<paragraph pageId="21" pageNumber="46">Named after its original habitat as an endophytic fungus.</paragraph>
|
||||
<subSubSection id="6C7F7E52F35A715DAFCA4AF8A0C59705" pageId="21" pageNumber="46" type="etymology">
|
||||
<paragraph id="D8D9B8C94A36C8B4D2CA7E2CDF5B0D32" pageId="21" pageNumber="46">Etymology.</paragraph>
|
||||
<paragraph id="31652CEEDAA33B62E78013419899CE7C" pageId="21" pageNumber="46">Named after its original habitat as an endophytic fungus.</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="21" pageNumber="46" type="holotype">
|
||||
<paragraph pageId="21" pageNumber="46">Holotype.</paragraph>
|
||||
<paragraph pageId="21" pageNumber="46">MFLU 18-0001</paragraph>
|
||||
<subSubSection id="684B71447509A223A18CE294C180A485" pageId="21" pageNumber="46" type="holotype">
|
||||
<paragraph id="420582B6C20D67F02C70A262DE578084" pageId="21" pageNumber="46">Holotype.</paragraph>
|
||||
<paragraph id="CCE0DAF61E5FC5EF4375ECA4DB8EE455" pageId="21" pageNumber="46">MFLU 18-0001</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="21" pageNumber="46" type="description">
|
||||
<paragraph pageId="21" pageNumber="46">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="21" pageNumber="46">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="21" pageNumber="46" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="FC931B1347E222DA5C33AB990E61E973" pageId="21" pageNumber="46" type="description">
|
||||
<paragraph id="96E6BF39D91A5ADDB09F0208FA5F4AF7" pageId="21" pageNumber="46">Culture characteristics.</paragraph>
|
||||
<paragraph id="DE7090B1D001F4E035B60433B8BD177B" pageId="21" pageNumber="46">
|
||||
<taxonomicName id="A86FCB0D9D1E8A52CBB7D67E1E7EEFF8" genus="Colonies" lsidName="Colonies" pageId="21" pageNumber="46" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, FE101), superficial, dark olivaceous with circular rings with filiform edge and rough and raised on media surface; reverse dark olivaceous.
|
||||
<taxonomicName genus="Mycelium" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Mycelium" pageId="21" pageNumber="46" phylum="Basidiomycota" rank="genus">Mycelium</taxonomicName>
|
||||
<taxonomicName id="0E5351A3F5EAA17FA03135A02400E07F" genus="Mycelium" lsidName="Mycelium" pageId="21" pageNumber="46" rank="genus">Mycelium</taxonomicName>
|
||||
composed of branched, pale-brown to dark-brown, thick-walled, guttulate, hyphae, with cells sub-globose to ovoid in shape. Not sporulating in culture.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="21" pageNumber="46" type="materials_examined">
|
||||
<paragraph pageId="21" pageNumber="46">Material examined.</paragraph>
|
||||
<paragraph pageId="21" pageNumber="46">
|
||||
<subSubSection id="DE271BE786340F8E458779AB5F5EF8C0" pageId="21" pageNumber="46" type="materials_examined">
|
||||
<paragraph id="D43D587709BA61E7AF16DE0FD7FF6976" pageId="21" pageNumber="46">Material examined.</paragraph>
|
||||
<paragraph id="9934C50B6083C0C7E76D2F4EAF50BA5F" pageId="21" pageNumber="46">
|
||||
THAILAND, Ranong, Muang, on healthy leaves of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="21" pageNumber="46" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
<taxonomicName id="F438155389F3489A12B6763FF101075A" class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="21" pageNumber="46" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
sp. (
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="21" pageNumber="46" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="93A6B606521F184867F781235D5BBB70" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="21" pageNumber="46" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
), 3 December 2016, S. Tibpromma FE101 (MFLU 18-0001, holotype); HKAS100847, paratype, ex-type living cultures, MFLUCC 17-0545 = KUMCC 17-0263.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="21" pageNumber="46" type="genbank numbers">
|
||||
<paragraph pageId="21" pageNumber="46">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="21" pageNumber="46">LSU=MG646946, SSU=MG646978, TEF1=MG646985.</paragraph>
|
||||
<subSubSection id="21EE7499CCBD56340AF62C668A4D7A5D" pageId="21" pageNumber="46" type="genbank numbers">
|
||||
<paragraph id="54DE5EFC82989D9055F3C8AC2A5FFC4E" pageId="21" pageNumber="46">GenBank numbers.</paragraph>
|
||||
<paragraph id="C3FE8F9E0F9838300437EFC27F2DED09" pageId="21" pageNumber="46">LSU=MG646946, SSU=MG646978, TEF1=MG646985.</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection lastPageId="22" lastPageNumber="47" pageId="21" pageNumber="46" type="notes">
|
||||
<paragraph pageId="21" pageNumber="46">Notes.</paragraph>
|
||||
<paragraph lastPageId="22" lastPageNumber="47" pageId="21" pageNumber="46">
|
||||
<taxonomicName class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus" order="Magnaporthales" pageId="21" pageNumber="46" phylum="Ascomycota" rank="genus">Mycoleptodiscus</taxonomicName>
|
||||
<subSubSection id="D4377FCCAF842B836BECF0CD5585094C" lastPageId="22" lastPageNumber="47" pageId="21" pageNumber="46" type="notes">
|
||||
<paragraph id="7DBD1137E2E2924D27626B4FEDC8A98D" pageId="21" pageNumber="46">Notes.</paragraph>
|
||||
<paragraph id="FB240E5A6B52D3AAC687F11277517817" lastPageId="22" lastPageNumber="47" pageId="21" pageNumber="46">
|
||||
<taxonomicName id="A087E3245D48E18416FA32C977B6291B" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus" order="Magnaporthales" pageId="21" pageNumber="46" phylum="Ascomycota" rank="genus">Mycoleptodiscus</taxonomicName>
|
||||
Ostaz. (1968) belongs to
|
||||
<taxonomicName genus="Magnaporthaceae" lsidName="Magnaporthaceae" pageId="21" pageNumber="46" rank="genus">Magnaporthaceae</taxonomicName>
|
||||
<taxonomicName id="FEAAAFCA9513F35EAD1A05DFA8B8FAEA" genus="Magnaporthaceae" lsidName="Magnaporthaceae" pageId="21" pageNumber="46" rank="genus">Magnaporthaceae</taxonomicName>
|
||||
,
|
||||
<taxonomicName genus="Magnaporthales." lsidName="Magnaporthales." pageId="21" pageNumber="46" rank="genus">Magnaporthales.</taxonomicName>
|
||||
<taxonomicName id="63DC103EE63EAA9F492CF57B2610B41E" genus="Magnaporthales." lsidName="Magnaporthales." pageId="21" pageNumber="46" rank="genus">Magnaporthales.</taxonomicName>
|
||||
Since 1968, there have been 17 records of
|
||||
<taxonomicName class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus" order="Magnaporthales" pageId="21" pageNumber="46" phylum="Ascomycota" rank="genus">Mycoleptodiscus</taxonomicName>
|
||||
<taxonomicName id="D2B8874F4D9360F182A4F60992DD1CB2" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus" order="Magnaporthales" pageId="21" pageNumber="46" phylum="Ascomycota" rank="genus">Mycoleptodiscus</taxonomicName>
|
||||
in Index Fun
|
||||
<pageBreakToken pageId="22" pageNumber="47" start="start">gorum</pageBreakToken>
|
||||
<pageBreakToken id="0737C99058C0658EC0BC5EC4A9701964" pageId="22" pageNumber="47" start="start">gorum</pageBreakToken>
|
||||
. Most of these species were described without molecular data. In this study, a new species
|
||||
<taxonomicName class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus</taxonomicName>
|
||||
<taxonomicName id="AD3D3F963931C9664B641CD4C97A50E4" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus</taxonomicName>
|
||||
is introduced, based on culture characteristics and phylogenetic analysis (100 % in ML).
|
||||
<taxonomicName class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus</taxonomicName>
|
||||
<taxonomicName id="41AF460019812553C7DF2A763C63985B" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus</taxonomicName>
|
||||
was found as an endophytic fungus on leaves of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="22" pageNumber="47" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
<taxonomicName id="5152D7CC1C0EB505693CADEE92F0A9C7" class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="22" pageNumber="47" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
sp;
|
||||
<taxonomicName class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus freycinetiae" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="freycinetiae">Mycoleptodiscus freycinetiae</taxonomicName>
|
||||
<taxonomicName id="1568BA2AC277D513E1E67306941EBF94" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus freycinetiae" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="freycinetiae">Mycoleptodiscus freycinetiae</taxonomicName>
|
||||
Whitton, K.D. Hyde & McKenzie was found as a saprobic fungus on the same host but there was no molecular data available to confirm this identification. The authors were unable to compare the morphological differences between the new taxon and
|
||||
<taxonomicName class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus freycinetiae" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="freycinetiae">Mycoleptodiscus freycinetiae</taxonomicName>
|
||||
<taxonomicName id="C926E0849C49239F0E901866E774B51A" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus freycinetiae" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="freycinetiae">Mycoleptodiscus freycinetiae</taxonomicName>
|
||||
, because only culture characteristics are presented here for this new taxon (Fig. 17).
|
||||
</paragraph>
|
||||
<caption pageId="22" pageNumber="47">
|
||||
<paragraph pageId="22" pageNumber="47">
|
||||
<caption id="5559DAD000EB9BEA6C81898EAABC4D25" pageId="22" pageNumber="47">
|
||||
<paragraph id="B2E43CDC852F7C28F921FE0C32AAAD85" pageId="22" pageNumber="47">
|
||||
Figure 15.
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum pandanicola" order="Glomerellales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="pandanicola">Colletotrichum pandanicola</taxonomicName>
|
||||
<taxonomicName id="6E5D70E9F80384A90DF587F7205DFD82" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum pandanicola" order="Glomerellales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="pandanicola">Colletotrichum pandanicola</taxonomicName>
|
||||
(MFLU 18-0003, holotype). a Colony on PDA media b
|
||||
<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
|
||||
<taxonomicName id="2BC0FB5A3093D809D7D0BF6E6A250F69" genus="Conidia" lsidName="Conidia" pageId="22" pageNumber="47" rank="genus">Conidia</taxonomicName>
|
||||
and conidiogenous cells
|
||||
<normalizedToken originalValue="c–g">c-g</normalizedToken>
|
||||
<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
|
||||
<normalizedToken id="82542D1ACF7004273851691DF33560B5" originalValue="c–g">c-g</normalizedToken>
|
||||
<taxonomicName id="01270D9B5C20723E9013597D9B8C3593" genus="Conidia" lsidName="Conidia" pageId="22" pageNumber="47" rank="genus">Conidia</taxonomicName>
|
||||
on PDA culture. Scale bars: 5
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="851E503F1BA6814016B2FFE025FE1FAA" originalValue="μm">μm</normalizedToken>
|
||||
(b), 2
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="0B118FDBE8DE62813C31CEF7E4CC8C52" originalValue="μm">μm</normalizedToken>
|
||||
(
|
||||
<normalizedToken originalValue="c–g">c-g</normalizedToken>
|
||||
<normalizedToken id="A3451A87C55F1C0E664E5DB93BAF699D" originalValue="c–g">c-g</normalizedToken>
|
||||
).
|
||||
</paragraph>
|
||||
</caption>
|
||||
<caption pageId="22" pageNumber="47">
|
||||
<paragraph pageId="22" pageNumber="47">
|
||||
<caption id="54E48ADED4209DC336EB3BA3E9EEC579" pageId="22" pageNumber="47">
|
||||
<paragraph id="BD13C72EE20D3680A7A8A426D264B51B" pageId="22" pageNumber="47">
|
||||
Figure 16. Phylogram generated from maximum likelihood analysis based on combined ITS, LSU, SSU and TEF1 sequenced data. Maximum parsimony bootstrap values are given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with
|
||||
<taxonomicName class="Sordariomycetes" family="Thyridiaceae" genus="Thyridium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Thyridium vestitum" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="vestitum">Thyridium vestitum</taxonomicName>
|
||||
<taxonomicName id="51122536AE3CB385B2A73BE873552ADB" class="Sordariomycetes" family="Thyridiaceae" genus="Thyridium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Thyridium vestitum" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="vestitum">Thyridium vestitum</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
<caption pageId="22" pageNumber="47">
|
||||
<paragraph pageId="22" pageNumber="47">
|
||||
<caption id="AEF95CA22E9116A5F5C3F1ADE7568E40" pageId="22" pageNumber="47">
|
||||
<paragraph id="45D5D91397281A63F175166DF75A40C8" pageId="22" pageNumber="47">
|
||||
Figure 17.
|
||||
<taxonomicName class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus</taxonomicName>
|
||||
<taxonomicName id="DECA254317E846D345EFEF928C4096F4" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus</taxonomicName>
|
||||
(MFLU 18-0001, holotype). a Colony on MEA media b, c Mycelia masses
|
||||
<normalizedToken originalValue="d–f">d-f</normalizedToken>
|
||||
<normalizedToken id="C84C8C6973F5450E4167DC7A095AC210" originalValue="d–f">d-f</normalizedToken>
|
||||
Vegetative hyphae in culture. Scale bars: 10
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="79E29800E4662491BFCDA1C9E1A2D6C2" originalValue="μm">μm</normalizedToken>
|
||||
(
|
||||
<normalizedToken originalValue="b–d">b-d</normalizedToken>
|
||||
<normalizedToken id="D4A5AD13773C6BD89D6DB865D1DAF63D" originalValue="b–d">b-d</normalizedToken>
|
||||
), 5
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="54EA92ED09E6631A5D0912E223F62060" originalValue="μm">μm</normalizedToken>
|
||||
(e, f).
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
|
|
@ -1,134 +1,134 @@
|
|||
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<treatment ID-GBIF-Taxon="142664214" LSID="urn:lsid:plazi:treatment:6FD0E28464F1BAF89D087A70699E74A5" httpUri="http://treatment.plazi.org/id/6FD0E28464F1BAF89D087A70699E74A5" lastPageNumber="40" pageId="15" pageNumber="40">
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<taxonomicName authority="Uppal, Patel & Kamat, Indian J. Agric. Sci. 8: 49 (1938)" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii Uppal, Patel & Kamat, Indian J. Agric. Sci. 8: 49 (1938)</taxonomicName>
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<treatment id="6FD0E28464F1BAF89D087A70699E74A5" ID-GBIF-Taxon="142664214" LSID="urn:lsid:plazi:treatment:6FD0E28464F1BAF89D087A70699E74A5" httpUri="http://treatment.plazi.org/id/6FD0E28464F1BAF89D087A70699E74A5" lastPageNumber="40" pageId="15" pageNumber="40" scope_family="Pleosporaceae" scope_order="Capnodiales" scope_phylum="Ascomycota">
|
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<subSubSection id="726F2B9E9581E982010685AF2BBA57CF" pageId="15" pageNumber="40" type="nomenclature">
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<taxonomicName id="26E7180264ECA89717C5B3B1B97B193D" ID-CoL="C9PS" authority="Uppal, Patel & Kamat, Indian J. Agric. Sci. 8: 49 (1938)" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii Uppal, Patel & Kamat, Indian J. Agric. Sci. 8: 49 (1938)</taxonomicName>
|
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</paragraph>
|
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</subSubSection>
|
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<subSubSection pageId="15" pageNumber="40" type="description">
|
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<paragraph pageId="15" pageNumber="40">Culture characteristics.</paragraph>
|
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<paragraph pageId="15" pageNumber="40">
|
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<taxonomicName genus="Colonies" lsidName="Colonies" pageId="15" pageNumber="40" rank="genus">Colonies</taxonomicName>
|
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<subSubSection id="1080BEF36D9B1778C788C6C9F658E819" pageId="15" pageNumber="40" type="description">
|
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<paragraph id="5330A4EE2E9C71E84E03038DADDED7EB" pageId="15" pageNumber="40">Culture characteristics.</paragraph>
|
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<paragraph id="14A35A47F69DB494927206646A6E55D1" pageId="15" pageNumber="40">
|
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<taxonomicName id="84817B5D742811CFBABA153FB5BB0C94" genus="Colonies" lsidName="Colonies" pageId="15" pageNumber="40" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, PE26), superficial, white-orange to cream, circular, entire edge, smooth, flossy, velvety and raised on surface media; reverse yellow-white at the margin and yellow-brown in centre. Not sporulating in culture.
|
||||
</paragraph>
|
||||
</subSubSection>
|
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<subSubSection pageId="15" pageNumber="40" type="genbank numbers">
|
||||
<paragraph pageId="15" pageNumber="40">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="15" pageNumber="40">ITS=MG646973, LSU=MG646952, TEF1=MG646987.</paragraph>
|
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<subSubSection id="B2C77DC12BC33B3B73D5AAE6166B1DF9" pageId="15" pageNumber="40" type="genbank numbers">
|
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<paragraph id="8C3594980CD5624B9AA1D9EAEA12EC5C" pageId="15" pageNumber="40">GenBank numbers.</paragraph>
|
||||
<paragraph id="B3F8AB3475B0D58A7B6E38CCBECDB4B6" pageId="15" pageNumber="40">ITS=MG646973, LSU=MG646952, TEF1=MG646987.</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="15" pageNumber="40" type="notes">
|
||||
<paragraph pageId="15" pageNumber="40">Notes.</paragraph>
|
||||
<paragraph pageId="15" pageNumber="40">
|
||||
<taxonomicName class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
<subSubSection id="ED0DFFAA2578FB2C5EEB0E1A2495D6C5" pageId="15" pageNumber="40" type="notes">
|
||||
<paragraph id="92E5D1AB5787B5306FC41F0088435793" pageId="15" pageNumber="40">Notes.</paragraph>
|
||||
<paragraph id="1E19EB35CBAF60E3D23F9DF6D3546C9F" pageId="15" pageNumber="40">
|
||||
<taxonomicName id="8237FA7EA4D006E223725D1FD89151E9" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
was introduced by
|
||||
<bibRefCitation author="Uppal, BN" journalOrPublisher="Indian Journal of Agricultural Science" pageId="37" pageNumber="62" pagination="49 - 62" title="Alternaria blight of Cumin." volume="8" year="1938">Uppal et al. (1938)</bibRefCitation>
|
||||
<bibRefCitation id="7F870D8840396680BDD769D8D0D5D3A2" author="Uppal, BN" journalOrPublisher="Indian Journal of Agricultural Science" pageId="37" pageNumber="62" pagination="49 - 62" title="Alternaria blight of Cumin." volume="8" year="1938">Uppal et al. (1938)</bibRefCitation>
|
||||
from India on
|
||||
<taxonomicName genus="Cumnium" lsidName="Cumnium cyminum" pageId="15" pageNumber="40" rank="species" species="cyminum">Cumnium cyminum</taxonomicName>
|
||||
<taxonomicName id="78C107D51C257A78AD776F2560B2A2BE" genus="Cumnium" lsidName="Cumnium cyminum" pageId="15" pageNumber="40" rank="species" species="cyminum">Cumnium cyminum</taxonomicName>
|
||||
. This species has a close phylogenetic relationship with
|
||||
<taxonomicName class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria tomato" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="tomato">Alternaria tomato</taxonomicName>
|
||||
<taxonomicName id="E893FC3A42F507376B3E56C85D900F87" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria tomato" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="tomato">Alternaria tomato</taxonomicName>
|
||||
and
|
||||
<taxonomicName lsidName="A. jacinthicola" pageId="15" pageNumber="40" rank="species" species="jacinthicola">A. jacinthicola</taxonomicName>
|
||||
<taxonomicName id="A7B384D0E3FF94F53F6DB5DB3F745525" lsidName="A. jacinthicola" pageId="15" pageNumber="40" rank="species" species="jacinthicola">A. jacinthicola</taxonomicName>
|
||||
(
|
||||
<bibRefCitation author="Woudenberg, JHC" journalOrPublisher="Studies in Mycology" pageId="38" pageNumber="63" url="https://doi.org/10.1016/j.simyco.2015.07.001" year="2015">Woudenberg et al. 2015</bibRefCitation>
|
||||
<bibRefCitation id="068D111D559C9D6438F6A64EF3E53979" author="Woudenberg, JHC" journalOrPublisher="Studies in Mycology" pageId="38" pageNumber="63" url="https://doi.org/10.1016/j.simyco.2015.07.001" year="2015">Woudenberg et al. 2015</bibRefCitation>
|
||||
). Results from phylogenetic analysis show that the
|
||||
<normalizedToken originalValue="authors’">authors'</normalizedToken>
|
||||
<normalizedToken id="1DC26599D3435AC7DBF65EFC7413DA20" originalValue="authors’">authors'</normalizedToken>
|
||||
collection belongs to
|
||||
<taxonomicName class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
<taxonomicName id="B17DF1A26BDCDDBE4F4B53F5B710B45E" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
with a relatively high bootstrap support (89% in ML) (Figure 11). Nucleotides across the ITS regions of
|
||||
<taxonomicName class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
<taxonomicName id="5BC218F7A357E766C918E04AA8222B3D" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
CBS 108.27 and the isolates were compared and the authors noted that they are identical.
|
||||
</paragraph>
|
||||
<caption pageId="15" pageNumber="40">
|
||||
<paragraph pageId="15" pageNumber="40">
|
||||
<caption id="97B578BB0B25E64C5983CA719EF2EC88" pageId="15" pageNumber="40">
|
||||
<paragraph id="DC15C5DE0E9019F686959E9EFBAF6EDF" pageId="15" pageNumber="40">
|
||||
Figure 11. Phylogram generated from maximum likelihood analysis based on ITS, TEF1, LSU and RPB2 sequence data. Maximum likelihood bootstrap values are given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with
|
||||
<taxonomicName class="Dothideomycetes" family="Pleosporaceae" genus="Pleospora" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pleospora herbarum" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="herbarum">Pleospora herbarum</taxonomicName>
|
||||
<taxonomicName id="078AE5FFAAD73300543ED8A01CB3756B" class="Dothideomycetes" family="Pleosporaceae" genus="Pleospora" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pleospora herbarum" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="herbarum">Pleospora herbarum</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
|
|
@ -1,128 +1,128 @@
|
|||
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<treatment ID-GBIF-Taxon="142664161" LSID="urn:lsid:plazi:treatment:76FBAFED696A8C5BA81AD95D55E1CDB9" httpUri="http://treatment.plazi.org/id/76FBAFED696A8C5BA81AD95D55E1CDB9" lastPageId="21" lastPageNumber="45" pageId="20" pageNumber="45">
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<taxonomicName authority="P. F. Cannon" family="Magnaporthaceae" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Mycelium" order="Magnaporthales" pageId="20" pageNumber="45" rank="family">Magnaporthaceae P.F. Cannon</taxonomicName>
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<treatment id="76FBAFED696A8C5BA81AD95D55E1CDB9" ID-GBIF-Taxon="142664161" LSID="urn:lsid:plazi:treatment:76FBAFED696A8C5BA81AD95D55E1CDB9" httpUri="http://treatment.plazi.org/id/76FBAFED696A8C5BA81AD95D55E1CDB9" lastPageId="21" lastPageNumber="45" pageId="20" pageNumber="45" scope_family="Glomerellaceae" scope_order="Diaporthales" scope_phylum="Ascomycota">
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<taxonomicName id="9A95BFEF20436A0DFD110C0348C80798" ID-CoL="CC7" authority="P. F. Cannon" class="Sordariomycetes" family="Magnaporthaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Magnaporthales" pageId="20" pageNumber="45" phylum="Ascomycota" rank="family">Magnaporthaceae P.F. Cannon</taxonomicName>
|
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<paragraph pageId="20" pageNumber="45">Remarks.</paragraph>
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<paragraph id="9F123FE279803443087FFA31A0C4FE8D" pageId="20" pageNumber="45">Remarks.</paragraph>
|
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<paragraph id="A430276CFFF99CC8D9DFE2AFEDC94E23" lastPageId="21" lastPageNumber="46" pageId="20" pageNumber="45">
|
||||
The family
|
||||
<taxonomicName genus="Magnaporthaceae" lsidName="Magnaporthaceae" pageId="20" pageNumber="45" rank="genus">Magnaporthaceae</taxonomicName>
|
||||
<taxonomicName id="97EBE116B4BE6F1FEC650352CC08FB16" genus="Magnaporthaceae" lsidName="Magnaporthaceae" pageId="20" pageNumber="45" rank="genus">Magnaporthaceae</taxonomicName>
|
||||
was introduced by
|
||||
<bibRefCitation author="Cannon, PF" journalOrPublisher="Systema Ascomycetum" pageId="27" pageNumber="52" pagination="25 - 42" title="The newly recognized family Magnaporthaceae and its interrelationships." volume="13" year="1994">Cannon (1994)</bibRefCitation>
|
||||
<bibRefCitation id="97998204E3C943878ABA8E15D30865F0" author="Cannon, PF" journalOrPublisher="Systema Ascomycetum" pageId="27" pageNumber="52" pagination="25 - 42" title="The newly recognized family Magnaporthaceae and its interrelationships." volume="13" year="1994">Cannon (1994)</bibRefCitation>
|
||||
and was placed as a family within the class
|
||||
<taxonomicName class="Sordariomycetes" lsidName="Mycelium" pageId="20" pageNumber="45" rank="class">Sordariomycetes</taxonomicName>
|
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<taxonomicName id="1B17237391C5ABD4D400FF4D4526EBBD" class="Sordariomycetes" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" pageId="20" pageNumber="45" phylum="Ascomycota" rank="class">Sordariomycetes</taxonomicName>
|
||||
(
|
||||
<bibRefCitation pageId="20" pageNumber="45">Kirk et al. 2001</bibRefCitation>
|
||||
<bibRefCitation id="2673465C832F51F5EBFF2BF0B24E8BBE" pageId="20" pageNumber="45">Kirk et al. 2001</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Lumbsch, HT" journalOrPublisher="Myconet" pageId="32" pageNumber="57" pagination="1 - 58" title="Outline of ascomycota- 2007." volume="13" year="2007">Lumbsch and Huhndorf 2007</bibRefCitation>
|
||||
<bibRefCitation id="BC1B5C1CD45FB0811179850AE2252C7B" author="Lumbsch, HT" journalOrPublisher="Myconet" pageId="32" pageNumber="57" pagination="1 - 58" title="Outline of ascomycota- 2007." volume="13" year="2007">Lumbsch and Huhndorf 2007</bibRefCitation>
|
||||
). According to
|
||||
<bibRefCitation pageId="20" pageNumber="45">Thongkantha et al. (2009)</bibRefCitation>
|
||||
<bibRefCitation id="8751C531A3BD486B57816619E604B643" pageId="20" pageNumber="45">Thongkantha et al. (2009)</bibRefCitation>
|
||||
, the placement of the taxa
|
||||
<taxonomicName genus="Magnaporthaceae" lsidName="Magnaporthaceae" pageId="20" pageNumber="45" rank="genus">Magnaporthaceae</taxonomicName>
|
||||
<taxonomicName id="CE9C1E6943751942153FC85C1D9BFD25" genus="Magnaporthaceae" lsidName="Magnaporthaceae" pageId="20" pageNumber="45" rank="genus">Magnaporthaceae</taxonomicName>
|
||||
has long been problematic due to a lack of convincing morphological
|
||||
<pageBreakToken pageId="21" pageNumber="46" start="start">characteristics</pageBreakToken>
|
||||
<pageBreakToken id="753E77CF5EA3FE42869FCF21EB32DEE8" pageId="21" pageNumber="46" start="start">characteristics</pageBreakToken>
|
||||
and inconclusive molecular data.
|
||||
<bibRefCitation pageId="21" pageNumber="46">Thongkantha et al. (2009)</bibRefCitation>
|
||||
<bibRefCitation id="62152F080F9BAE2341B10F48AA49CEFE" pageId="21" pageNumber="46">Thongkantha et al. (2009)</bibRefCitation>
|
||||
established a new order,
|
||||
<taxonomicName genus="Magnaporthales" lsidName="Magnaporthales" pageId="21" pageNumber="46" rank="genus">Magnaporthales</taxonomicName>
|
||||
<taxonomicName id="75567BAA852203FF8A037891910E38E7" genus="Magnaporthales" lsidName="Magnaporthales" pageId="21" pageNumber="46" rank="genus">Magnaporthales</taxonomicName>
|
||||
, to accommodate
|
||||
<taxonomicName genus="Magnaporthaceae" lsidName="Magnaporthaceae" pageId="21" pageNumber="46" rank="genus">Magnaporthaceae</taxonomicName>
|
||||
<taxonomicName id="6BA8A224D08961EF9E7154740EBE332E" genus="Magnaporthaceae" lsidName="Magnaporthaceae" pageId="21" pageNumber="46" rank="genus">Magnaporthaceae</taxonomicName>
|
||||
, based on a combination of morphological characteristics and the phylogenetic analysis of combined sequence data.
|
||||
<bibRefCitation author="Maharachchikumbura, SS" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" pagination="199 - 301" title="Towards a natural classification and backbone tree for Sordariomycetes." url="https://doi.org/10.1007/s13225-015-0331-z" volume="72" year="2015">Maharachchikumbura et al. (2015)</bibRefCitation>
|
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<bibRefCitation id="D6EBD8380CE6A925BD41EA743E99E898" author="Maharachchikumbura, SS" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" pagination="199 - 301" title="Towards a natural classification and backbone tree for Sordariomycetes." url="https://doi.org/10.1007/s13225-015-0331-z" volume="72" year="2015">Maharachchikumbura et al. (2015)</bibRefCitation>
|
||||
provided an updated outline of the family
|
||||
<taxonomicName genus="Magnaporthacea" lsidName="Magnaporthacea" pageId="21" pageNumber="46" rank="genus">Magnaporthacea</taxonomicName>
|
||||
<taxonomicName id="737A93FE507C3C118334CCFC5DDDF53F" genus="Magnaporthacea" lsidName="Magnaporthacea" pageId="21" pageNumber="46" rank="genus">Magnaporthacea</taxonomicName>
|
||||
e with 20 genera, which included both sexual and asexual morphs. In this study,
|
||||
<taxonomicName class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="21" pageNumber="46" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus</taxonomicName>
|
||||
<taxonomicName id="1860E62CC60FCB8BFD947C9BB555B63D" class="Sordariomycetes" family="Magnaporthaceae" genus="Mycoleptodiscus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycoleptodiscus endophyticus" order="Magnaporthales" pageId="21" pageNumber="46" phylum="Ascomycota" rank="species" species="endophyticus">Mycoleptodiscus endophyticus</taxonomicName>
|
||||
is introduced as a new species.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,132 +1,132 @@
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<mods:namePart>Doilom, Mingkwan</mods:namePart>
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<mods:namePart id="8B01C34655E7D6BEEFD998BABF7B1736">Doilom, Mingkwan</mods:namePart>
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<mods:namePart>Yang, Jun-Bo</mods:namePart>
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<mods:namePart id="A62BDB08BD53C45668B4831301C516D9">Yang, Jun-Bo</mods:namePart>
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<mods:namePart>Tang, Alvin M. C.</mods:namePart>
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<mods:namePart id="17B8B6959F70498BFD88D676F99934D4">Tang, Alvin M. C.</mods:namePart>
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<mods:namePart>Karunarathna, Samantha C.</mods:namePart>
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<mods:namePart id="6D138F1EF39C9F0D6ED569DFD296F2F2">Karunarathna, Samantha C.</mods:namePart>
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<treatment ID-GBIF-Taxon="142664169" LSID="urn:lsid:plazi:treatment:7B9CAD105D8D16187A40CDEEEBF55017" httpUri="http://treatment.plazi.org/id/7B9CAD105D8D16187A40CDEEEBF55017" lastPageNumber="36" pageId="11" pageNumber="36">
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<subSubSection pageId="11" pageNumber="36" type="nomenclature">
|
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<paragraph pageId="11" pageNumber="36">
|
||||
<taxonomicName authority="Munk." family="Massarinaceae" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Mycelium" order="Pleosporales" pageId="11" pageNumber="36" rank="family">Massarinaceae Munk.</taxonomicName>
|
||||
<treatment id="7B9CAD105D8D16187A40CDEEEBF55017" ID-GBIF-Taxon="142664169" LSID="urn:lsid:plazi:treatment:7B9CAD105D8D16187A40CDEEEBF55017" httpUri="http://treatment.plazi.org/id/7B9CAD105D8D16187A40CDEEEBF55017" lastPageNumber="36" pageId="11" pageNumber="36" scope_order="Capnodiales" scope_phylum="Ascomycota">
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|
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|
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<taxonomicName id="1C164BE1F837B9F562936D7BF21EF7EA" ID-CoL="CF5" ID-ENA="290882" authority="Munk." class="Dothideomycetes" family="Massarinaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Pleosporales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="family">Massarinaceae Munk.</taxonomicName>
|
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</paragraph>
|
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</subSubSection>
|
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<subSubSection pageId="11" pageNumber="36" type="remarks">
|
||||
<paragraph pageId="11" pageNumber="36">Remarks.</paragraph>
|
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<paragraph pageId="11" pageNumber="36">
|
||||
<subSubSection id="3998BE58AFA232B2E6FA445F48F0FAF9" pageId="11" pageNumber="36" type="remarks">
|
||||
<paragraph id="4943B903CECBFA34EC58F30FDB517586" pageId="11" pageNumber="36">Remarks.</paragraph>
|
||||
<paragraph id="D5F034B9A11BFE651B98729D62708D2C" pageId="11" pageNumber="36">
|
||||
The family
|
||||
<taxonomicName genus="Massarinaceae" lsidName="Massarinaceae" pageId="11" pageNumber="36" rank="genus">Massarinaceae</taxonomicName>
|
||||
<taxonomicName id="3E7D4E79E60787D844F53F5226FBFD1C" genus="Massarinaceae" lsidName="Massarinaceae" pageId="11" pageNumber="36" rank="genus">Massarinaceae</taxonomicName>
|
||||
was introduced by
|
||||
<bibRefCitation author="Munk, A" journalOrPublisher="Friesia" pageId="33" pageNumber="58" pagination="303 - 308" title="On Metasphaeriacoccodes (Karst.) Sacc. and other fungi probably related to Massarina Sacc. (Massarinaceae n. fam.)." volume="5" year="1956">Munk (1956)</bibRefCitation>
|
||||
<bibRefCitation id="AE7443A68DB5C536043410418148E9E6" author="Munk, A" journalOrPublisher="Friesia" pageId="33" pageNumber="58" pagination="303 - 308" title="On Metasphaeriacoccodes (Karst.) Sacc. and other fungi probably related to Massarina Sacc. (Massarinaceae n. fam.)." volume="5" year="1956">Munk (1956)</bibRefCitation>
|
||||
under
|
||||
<taxonomicName genus="Pleosporales" lsidName="Pleosporales" pageId="11" pageNumber="36" rank="genus">Pleosporales</taxonomicName>
|
||||
<taxonomicName id="24E7EC64B244B9685711CAA934F8AAF9" genus="Pleosporales" lsidName="Pleosporales" pageId="11" pageNumber="36" rank="genus">Pleosporales</taxonomicName>
|
||||
together with
|
||||
<taxonomicName genus="Cucurbitariaceae" lsidName="Cucurbitariaceae" pageId="11" pageNumber="36" rank="genus">Cucurbitariaceae</taxonomicName>
|
||||
<taxonomicName id="4F0BB20BBDB2F63F46FD3E74E43755D8" genus="Cucurbitariaceae" lsidName="Cucurbitariaceae" pageId="11" pageNumber="36" rank="genus">Cucurbitariaceae</taxonomicName>
|
||||
and
|
||||
<taxonomicName genus="Didymosphaeriaceae" lsidName="Didymosphaeriaceae" pageId="11" pageNumber="36" rank="genus">Didymosphaeriaceae</taxonomicName>
|
||||
<taxonomicName id="8C52886A4A4451141FC4B96AA7DAC6A1" genus="Didymosphaeriaceae" lsidName="Didymosphaeriaceae" pageId="11" pageNumber="36" rank="genus">Didymosphaeriaceae</taxonomicName>
|
||||
. Later,
|
||||
<bibRefCitation pageId="11" pageNumber="36">Barr (1987)</bibRefCitation>
|
||||
<bibRefCitation id="F8BC52A4231E58CC958AE2795D66C375" pageId="11" pageNumber="36">Barr (1987)</bibRefCitation>
|
||||
segregated
|
||||
<taxonomicName genus="Massarinaceae" lsidName="Massarinaceae" pageId="11" pageNumber="36" rank="genus">Massarinaceae</taxonomicName>
|
||||
<taxonomicName id="F1DBA67CC01C0F3B8E9DEB037EEDFD4A" genus="Massarinaceae" lsidName="Massarinaceae" pageId="11" pageNumber="36" rank="genus">Massarinaceae</taxonomicName>
|
||||
under
|
||||
<taxonomicName genus="Lophiostomataceae" lsidName="Lophiostomataceae" pageId="11" pageNumber="36" rank="genus">Lophiostomataceae</taxonomicName>
|
||||
<taxonomicName id="5C1815853599F3D2BD997E3BAF9824E2" genus="Lophiostomataceae" lsidName="Lophiostomataceae" pageId="11" pageNumber="36" rank="genus">Lophiostomataceae</taxonomicName>
|
||||
based on morphology, while based on multigene phylogenetic analysis
|
||||
<bibRefCitation author="Schoch, CL" journalOrPublisher="Studies in Mycology" pageId="34" pageNumber="59" pagination="1 - 15" title="A class-wide phylogenetic assessment of Dothideomycetes." url="https://doi.org/10.3114/sim.2009.64.01" volume="64" year="2009">Schoch et al. (2009)</bibRefCitation>
|
||||
<bibRefCitation id="72BC6172C74329CD4FB6CD77D1D9893A" author="Schoch, CL" journalOrPublisher="Studies in Mycology" pageId="34" pageNumber="59" pagination="1 - 15" title="A class-wide phylogenetic assessment of Dothideomycetes." url="https://doi.org/10.3114/sim.2009.64.01" volume="64" year="2009">Schoch et al. (2009)</bibRefCitation>
|
||||
also showed
|
||||
<taxonomicName genus="Massarinaceae" lsidName="Massarinaceae" pageId="11" pageNumber="36" rank="genus">Massarinaceae</taxonomicName>
|
||||
<taxonomicName id="B3F506E289B686DDEB061BA893C4DDB3" genus="Massarinaceae" lsidName="Massarinaceae" pageId="11" pageNumber="36" rank="genus">Massarinaceae</taxonomicName>
|
||||
is a distinct family in order
|
||||
<taxonomicName genus="Pleosporales" lsidName="Pleosporales" pageId="11" pageNumber="36" rank="genus">Pleosporales</taxonomicName>
|
||||
<taxonomicName id="422576921F6838EF0246229A955D9AA3" genus="Pleosporales" lsidName="Pleosporales" pageId="11" pageNumber="36" rank="genus">Pleosporales</taxonomicName>
|
||||
. Recently,
|
||||
<bibRefCitation author="Zhang, Y" journalOrPublisher="Studies in Mycology" pageId="38" pageNumber="63" pagination="85 - 102" title="Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation." url="https://doi.org/10.3114/sim.2009.64.04" volume="64" year="2009">Zhang et al. (2009</bibRefCitation>
|
||||
<bibRefCitation id="4D4EB56359774054A01C70799E75A73A" author="Zhang, Y" journalOrPublisher="Studies in Mycology" pageId="38" pageNumber="63" pagination="85 - 102" title="Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation." url="https://doi.org/10.3114/sim.2009.64.04" volume="64" year="2009">Zhang et al. (2009</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Zhang, Y" journalOrPublisher="Fungal Diversity" pageId="38" pageNumber="63" pagination="1 - 221" title="Pleosporales." url="https://doi.org/10.1007/s13225-011-0117-x" volume="53" year="2012">2012</bibRefCitation>
|
||||
<bibRefCitation id="F8EFA3FD3A24EB310CF7338A92CED681" author="Zhang, Y" journalOrPublisher="Fungal Diversity" pageId="38" pageNumber="63" pagination="1 - 221" title="Pleosporales." url="https://doi.org/10.1007/s13225-011-0117-x" volume="53" year="2012">2012</bibRefCitation>
|
||||
) recognised
|
||||
<taxonomicName genus="Massarinaceae" lsidName="Massarinaceae" pageId="11" pageNumber="36" rank="genus">Massarinaceae</taxonomicName>
|
||||
<taxonomicName id="FAEB42C528170462AB50AF7FE63819FB" genus="Massarinaceae" lsidName="Massarinaceae" pageId="11" pageNumber="36" rank="genus">Massarinaceae</taxonomicName>
|
||||
as a distinct lineage based on both morphology and molecular phylogeny. In this study, a new species of endophytic
|
||||
<taxonomicName class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
<taxonomicName id="6FDE02D92730D7AA55F71122E355A556" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
, based on morphological and phylogenetic support, is introduced from
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="11" pageNumber="36" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="0DEE397BF97659A1D032E05A3054C491" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="11" pageNumber="36" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. in Thailand.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,151 +1,151 @@
|
|||
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<mods:namePart>Mortimer, Peter E.</mods:namePart>
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<mods:namePart>Xu, Jianchu</mods:namePart>
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<mods:namePart>Doilom, Mingkwan</mods:namePart>
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<mods:namePart id="2FBE20396AB177903A82EBFB9CAC7EB9">Doilom, Mingkwan</mods:namePart>
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<mods:namePart>Yang, Jun-Bo</mods:namePart>
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<mods:namePart>Tang, Alvin M. C.</mods:namePart>
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<mods:namePart>Karunarathna, Samantha C.</mods:namePart>
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<mods:namePart id="17B44540078A73ECBBB9AFDE84F00ED5">Karunarathna, Samantha C.</mods:namePart>
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<mods:part>
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<mods:date>2018</mods:date>
|
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<mods:number>33</mods:number>
|
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<mods:date id="F8107F351D1706976BF2F658F5941C72">2018</mods:date>
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<mods:number id="F0DE5CAB4F427E8E1EB84737D1F370F1">33</mods:number>
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<mods:extent unit="page">
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<mods:start>25</mods:start>
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<mods:start id="FF5AFCF4A46985A8AAC334322739CA51">25</mods:start>
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<mods:end id="CDCA6051306396F22A183E18D50C3C09">67</mods:end>
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<treatment ID-GBIF-Taxon="142664221" LSID="urn:lsid:plazi:treatment:8B885C845A3D34D0AF9BC182D25CC29E" httpUri="http://treatment.plazi.org/id/8B885C845A3D34D0AF9BC182D25CC29E" lastPageId="9" lastPageNumber="34" pageId="8" pageNumber="33">
|
||||
<subSubSection pageId="8" pageNumber="33" type="nomenclature">
|
||||
<paragraph pageId="8" pageNumber="33">
|
||||
<taxonomicName LSID=" MB823837" authority="Tibpromma & K. D. Hyde" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="8" pageNumber="33" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel pageId="8" pageNumber="33">sp. nov.</taxonomicNameLabel>
|
||||
<treatment id="8B885C845A3D34D0AF9BC182D25CC29E" ID-GBIF-Taxon="142664221" LSID="urn:lsid:plazi:treatment:8B885C845A3D34D0AF9BC182D25CC29E" httpUri="http://treatment.plazi.org/id/8B885C845A3D34D0AF9BC182D25CC29E" lastPageId="9" lastPageNumber="34" pageId="8" pageNumber="33" scope_order="Botryosphaeriales" scope_phylum="Ascomycota">
|
||||
<subSubSection id="7F4AE90A7E3D67FD062FC0C80B2F2122" pageId="8" pageNumber="33" type="nomenclature">
|
||||
<paragraph id="32C0AE4EEF69DBA5B773E0EC8ED5AF30" pageId="8" pageNumber="33">
|
||||
<taxonomicName id="B4C2FEBEE92C54445683D4A3A2BB5883" ID-CoL="39RVB" LSID=" MB823837" authority="Tibpromma & K. D. Hyde" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="8" pageNumber="33" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel id="05064B821D510544E061A9ADB6DA1453" pageId="8" pageNumber="33">sp. nov.</taxonomicNameLabel>
|
||||
Figure 6
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="9" pageNumber="34" type="etymology">
|
||||
<paragraph pageId="9" pageNumber="34">
|
||||
<pageBreakToken pageId="9" pageNumber="34" start="start">Etymology</pageBreakToken>
|
||||
<subSubSection id="12FF45F4CC11AD67CDFB8C27EB47ED05" pageId="9" pageNumber="34" type="etymology">
|
||||
<paragraph id="3C0F57C82E57D60E80519B9F9C870A17" pageId="9" pageNumber="34">
|
||||
<pageBreakToken id="E09F1C56F1AB04F37318E337DF8B8710" pageId="9" pageNumber="34" start="start">Etymology</pageBreakToken>
|
||||
.
|
||||
</paragraph>
|
||||
<paragraph pageId="9" pageNumber="34">
|
||||
<paragraph id="5B69E54AA7F9E597C1EADA599F1D2A73" pageId="9" pageNumber="34">
|
||||
name referring to the host genus on which the fungus was found (
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="9" pageNumber="34" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
<taxonomicName id="33C066B4BEED49AA087C89B5F5C634B9" class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="9" pageNumber="34" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="9" pageNumber="34" type="holotype">
|
||||
<paragraph pageId="9" pageNumber="34">Holotype.</paragraph>
|
||||
<paragraph pageId="9" pageNumber="34">MFLU 18-0002</paragraph>
|
||||
<subSubSection id="1DDAEEB82FB3C6036995815ACD5B7715" pageId="9" pageNumber="34" type="holotype">
|
||||
<paragraph id="C32B98893C70DC270A1AC47630B32400" pageId="9" pageNumber="34">Holotype.</paragraph>
|
||||
<paragraph id="F04B18C179A9FC5BD2D88067BC8BE314" pageId="9" pageNumber="34">MFLU 18-0002</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="9" pageNumber="34" type="description">
|
||||
<paragraph pageId="9" pageNumber="34">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="9" pageNumber="34">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="9" pageNumber="34" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="D4EA8F0B24A13D8F758DF22B9888B787" pageId="9" pageNumber="34" type="description">
|
||||
<paragraph id="3ECBABF57C5FA59CF982F0E869CC8B63" pageId="9" pageNumber="34">Culture characteristics.</paragraph>
|
||||
<paragraph id="069FD86690586FCF1BD40FDDA1A75E26" pageId="9" pageNumber="34">
|
||||
<taxonomicName id="A6EF674746684CEA884A5D041A21A75E" genus="Colonies" lsidName="Colonies" pageId="9" pageNumber="34" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, FE41), superficial, initially white-grey with flat mycelium on media with dark centre, later becoming dark olivaceous with circular rings and flossy at the margin; reverse dark olivaceous. Generative hyphae simple-septate, branched, sub-hyaline to brown, cylindrical, guttulate, thick-walled. Not sporulating in culture (Figure 6).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="9" pageNumber="34" type="materials_examined">
|
||||
<paragraph pageId="9" pageNumber="34">Material examined.</paragraph>
|
||||
<paragraph pageId="9" pageNumber="34">
|
||||
<subSubSection id="DC99E3822F72084C8124C8433479F6F6" pageId="9" pageNumber="34" type="materials_examined">
|
||||
<paragraph id="6FC53A961E949BAFAA11119C5C2F377B" pageId="9" pageNumber="34">Material examined.</paragraph>
|
||||
<paragraph id="7B7A42520760CE5803F275DB7A07639C" pageId="9" pageNumber="34">
|
||||
THAILAND, Ranong, Muang, on healthy leaves of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="9" pageNumber="34" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
<taxonomicName id="8A362BC817E65522E2BDBEE43153CA8C" class="Liliopsida" family="Pandanaceae" genus="Freycinetia" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Freycinetia" order="Pandanales" pageId="9" pageNumber="34" phylum="Tracheophyta" rank="genus">Freycinetia</taxonomicName>
|
||||
sp. (
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="9" pageNumber="34" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="578CB89F6A89E469EF1FF53869EA8D40" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="9" pageNumber="34" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
), 3 December 2016, S. Tibpromma FE41 (MFLU 18-0002, holotype); HKAS100853, paratype, ex-type living cultures, MFLUCC 17-0547 = KUMCC 17-0292.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="9" pageNumber="34" type="genbank numbers">
|
||||
<paragraph pageId="9" pageNumber="34">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="9" pageNumber="34">
|
||||
<subSubSection id="0F3C4717D1C88D902D3644CE3A277017" pageId="9" pageNumber="34" type="genbank numbers">
|
||||
<paragraph id="3439CC147B995D79217697F18F3FC3ED" pageId="9" pageNumber="34">GenBank numbers.</paragraph>
|
||||
<paragraph id="F50E3115835CAD6423E025EE1F1F78A3" pageId="9" pageNumber="34">
|
||||
ITS=MG646955, LSU=MG646948, TEF1=MG646983,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="287D91FC32BF99170DD65CD728E27431" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
=MG646924.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="9" pageNumber="34" type="notes">
|
||||
<paragraph pageId="9" pageNumber="34">Notes.</paragraph>
|
||||
<paragraph pageId="9" pageNumber="34">
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="9" pageNumber="34" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae</taxonomicName>
|
||||
<subSubSection id="64707E019AA4893EA55CDC92672E5924" pageId="9" pageNumber="34" type="notes">
|
||||
<paragraph id="911F7DE8AD07419E001099B9B59E64F2" pageId="9" pageNumber="34">Notes.</paragraph>
|
||||
<paragraph id="1EECBC7FF1AB5D17DD4B58CCAC90B714" pageId="9" pageNumber="34">
|
||||
<taxonomicName id="6CD328DBC732CE09370CF7F206014BFB" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="9" pageNumber="34" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae</taxonomicName>
|
||||
is closely related to the endophytic fungus
|
||||
<taxonomicName lsidName="En. endophytica" pageId="9" pageNumber="34" rank="species" species="endophytica">En. endophytica</taxonomicName>
|
||||
<taxonomicName id="A6BCC882AEA4C491E59F0508890FBF88" lsidName="En. endophytica" pageId="9" pageNumber="34" rank="species" species="endophytica">En. endophytica</taxonomicName>
|
||||
. Therefore, the culture characteristics of these two taxa were compared and it was found that, in
|
||||
<taxonomicName lsidName="En. endophytica" pageId="9" pageNumber="34" rank="species" species="endophytica">En. endophytica</taxonomicName>
|
||||
<taxonomicName id="FBA5B048DEF93E0C2908E008F8B2D13D" lsidName="En. endophytica" pageId="9" pageNumber="34" rank="species" species="endophytica">En. endophytica</taxonomicName>
|
||||
, at first the hyphae are colourless, immersed, later becoming olivaceous in the centre with irregular concentric rings; aerial mycelia are dark olivaceous or grey when dense; shiny black when the aerial mycelia are loose (
|
||||
<bibRefCitation author="Rojas, EI" journalOrPublisher="Mycologia" pageId="34" pageNumber="59" pagination="760 - 775" title="Endomelanconiopsis, a new anamorph genus in the Botryosphaeriaceae." url="https://doi.org/10.3852/07-207" volume="100" year="2008">Rojas et al. 2008</bibRefCitation>
|
||||
<bibRefCitation id="299DA97717034BB28AE7CE95FCB2632E" author="Rojas, EI" journalOrPublisher="Mycologia" pageId="34" pageNumber="59" pagination="760 - 775" title="Endomelanconiopsis, a new anamorph genus in the Botryosphaeriaceae." url="https://doi.org/10.3852/07-207" volume="100" year="2008">Rojas et al. 2008</bibRefCitation>
|
||||
) whereas aerial mycelia of
|
||||
<taxonomicName lsidName="En. freycinetiae" pageId="9" pageNumber="34" rank="species" species="freycinetiae">En. freycinetiae</taxonomicName>
|
||||
<taxonomicName id="B25E76ADA24EDA1B9D3B6F825AA670D9" lsidName="En. freycinetiae" pageId="9" pageNumber="34" rank="species" species="freycinetiae">En. freycinetiae</taxonomicName>
|
||||
has dark olivaceous, circular rings and flossy surface (Figure 2, FE41). Nucleotide base pairs of ITS and TEF1 were also compared and it was found that there are differences (ITS 3 bp, TEF1 8 bp).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,117 +1,117 @@
|
|||
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<treatment ID-GBIF-Taxon="142664148" LSID="urn:lsid:plazi:treatment:930D48148D049D71B62084170A371CAC" httpUri="http://treatment.plazi.org/id/930D48148D049D71B62084170A371CAC" lastPageNumber="32" pageId="7" pageNumber="32">
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<subSubSection pageId="7" pageNumber="32" type="nomenclature">
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<taxonomicName authority="Burds., in Burdsall & Eslyn, Mycotaxon 1 (2): 124 (1974)" class="Agaricomycetes" family="Phanerochaetaceae" genus="Phanerochaete" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phanerochaete chrysosporium" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="chrysosporium">Phanerochaete chrysosporium Burds., in Burdsall & Eslyn, Mycotaxon 1(2): 124 (1974)</taxonomicName>
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<treatment id="930D48148D049D71B62084170A371CAC" ID-GBIF-Taxon="142664148" LSID="urn:lsid:plazi:treatment:930D48148D049D71B62084170A371CAC" httpUri="http://treatment.plazi.org/id/930D48148D049D71B62084170A371CAC" lastPageNumber="32" pageId="7" pageNumber="32" scope_class="Agaricomycetes" scope_family="Polyporaceae" scope_order="Polyporales">
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<subSubSection id="F1DF1D374A185C9BE6A9C216A0F805B2" pageId="7" pageNumber="32" type="nomenclature">
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<paragraph id="253F527BA54CAC391F7017E45371C31A" pageId="7" pageNumber="32">
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<taxonomicName id="E64805AFE6E76369B2CB7B9E5CD9287C" ID-CoL="6V9CC" authority="Burds., in Burdsall & Eslyn, Mycotaxon 1 (2): 124 (1974)" class="Agaricomycetes" family="Phanerochaetaceae" genus="Phanerochaete" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phanerochaete chrysosporium" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="chrysosporium">Phanerochaete chrysosporium Burds., in Burdsall & Eslyn, Mycotaxon 1(2): 124 (1974)</taxonomicName>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="7" pageNumber="32" type="description">
|
||||
<paragraph pageId="7" pageNumber="32">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="7" pageNumber="32">
|
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<taxonomicName genus="Colonies" lsidName="Colonies" pageId="7" pageNumber="32" rank="genus">Colonies</taxonomicName>
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<subSubSection id="A50F23C679E9D05CDBEE74655A377826" pageId="7" pageNumber="32" type="description">
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<paragraph id="B0418DB2F984B740F1D26ACE62E74BB7" pageId="7" pageNumber="32">Culture characteristics.</paragraph>
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<paragraph id="6E48DCB901A8D723E01ECD8945536C90" pageId="7" pageNumber="32">
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<taxonomicName id="168E02DCC10D24788B58DE0F10BF5409" genus="Colonies" lsidName="Colonies" pageId="7" pageNumber="32" rank="genus">Colonies</taxonomicName>
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on PDA (Figure 2, PE15), superficial, white, surface smooth with flat media surface, circular, with entire edge; reverse white to yellow-white.
|
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</paragraph>
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</subSubSection>
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<subSubSection pageId="7" pageNumber="32" type="genbank numbers">
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<paragraph pageId="7" pageNumber="32">GenBank numbers.</paragraph>
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<paragraph pageId="7" pageNumber="32">ITS=MG646957.</paragraph>
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<subSubSection id="3D0CE84660D28A8B63B6912C7C504E67" pageId="7" pageNumber="32" type="genbank numbers">
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<paragraph id="8FDA8C8B57E6A9339BE3649F3B3518A1" pageId="7" pageNumber="32">GenBank numbers.</paragraph>
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<paragraph id="FAC61A31AFAF4153F617D4533836F010" pageId="7" pageNumber="32">ITS=MG646957.</paragraph>
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</subSubSection>
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<subSubSection pageId="7" pageNumber="32" type="notes">
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<paragraph pageId="7" pageNumber="32">Notes.</paragraph>
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<paragraph pageId="7" pageNumber="32">
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<subSubSection id="430B870DFE45EEFA5FE1DFE143AAA464" pageId="7" pageNumber="32" type="notes">
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<paragraph id="2071DE907141BC3B2DD83F928C3D9028" pageId="7" pageNumber="32">Notes.</paragraph>
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<paragraph id="0272451DB4DE9DD718AC7AB312A81E0A" pageId="7" pageNumber="32">
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Burdsall and Eslyn (1974) introduced
|
||||
<taxonomicName class="Agaricomycetes" family="Phanerochaetaceae" genus="Phanerochaete" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phanerochaete chrysosporium" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="chrysosporium">Phanerochaete chrysosporium</taxonomicName>
|
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<taxonomicName id="9862C6993B7FBA66CBBA7BA0B438731D" class="Agaricomycetes" family="Phanerochaetaceae" genus="Phanerochaete" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phanerochaete chrysosporium" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="chrysosporium">Phanerochaete chrysosporium</taxonomicName>
|
||||
which was collected on dead wood of
|
||||
<taxonomicName class="Magnoliopsida" family="Platanaceae" genus="Platanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Platanus wrightii" order="Proteales" pageId="7" pageNumber="32" phylum="Tracheophyta" rank="species" species="wrightii">Platanus wrightii</taxonomicName>
|
||||
<taxonomicName id="3FA2D3ADB015CDAF33362EDF7DD7F185" class="Magnoliopsida" family="Platanaceae" genus="Platanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Platanus wrightii" order="Proteales" pageId="7" pageNumber="32" phylum="Tracheophyta" rank="species" species="wrightii">Platanus wrightii</taxonomicName>
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||||
in the USA. Phylogenetic analysis of ITS sequence data shows this taxon groups with
|
||||
<taxonomicName class="Agaricomycetes" family="Phanerochaetaceae" genus="Phanerochaete" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phanerochaete chrysosporium" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="chrysosporium">Phanerochaete chrysosporium</taxonomicName>
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<taxonomicName id="C11255B61ED3CF456C870A4FBA861CBA" class="Agaricomycetes" family="Phanerochaetaceae" genus="Phanerochaete" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phanerochaete chrysosporium" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="chrysosporium">Phanerochaete chrysosporium</taxonomicName>
|
||||
(sequences obtained from GenBank) that had been collected from different hosts. The phylogenetic placement of this species is shown in Figure 3.
|
||||
</paragraph>
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</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,120 +1,120 @@
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<treatment ID-GBIF-Taxon="142664178" LSID="urn:lsid:plazi:treatment:B0580FD5E08095FDE9D6B8EA2DAD39E9" httpUri="http://treatment.plazi.org/id/B0580FD5E08095FDE9D6B8EA2DAD39E9" lastPageNumber="49" pageId="24" pageNumber="49">
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<taxonomicName authority="Vaughan-Mart., Kurtzman, S. A. Mey. & E. B. O'Neill) Kurtzman & M. Suzuki, Mycoscience 51 (1): 8 (2010" authorityYear="2010" class="Saccharomycetes" family="Debaryomycetaceae" genus="Meyerozyma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Meyerozyma caribbica" order="Saccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="caribbica">
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<taxonomicName id="792F50BD1FD1BE7BF8E24A58B87685A0" ID-CoL="42L3B" authority="Vaughan-Mart., Kurtzman, S. A. Mey. & E. B. O'Neill) Kurtzman & M. Suzuki, Mycoscience 51 (1): 8 (2010" authorityYear="2010" class="Saccharomycetes" family="Debaryomycetaceae" genus="Meyerozyma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Meyerozyma caribbica" order="Saccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="caribbica">
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Meyerozyma caribbica (Vaughan-Mart., Kurtzman, S.A. Mey. & E.B.
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<normalizedToken originalValue="O’Neill">O'Neill</normalizedToken>
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<normalizedToken id="2FEE6C327F0B4B98F9088D8B65AEC471" originalValue="O’Neill">O'Neill</normalizedToken>
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) Kurtzman & M. Suzuki, Mycoscience 51(1): 8 (2010)
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<paragraph pageId="24" pageNumber="49">Culture characteristics.</paragraph>
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<paragraph pageId="24" pageNumber="49">
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<taxonomicName genus="Colonies" lsidName="Colonies" pageId="24" pageNumber="49" rank="genus">Colonies</taxonomicName>
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<paragraph id="26E8B1777AE604131291BBE8061648CD" pageId="24" pageNumber="49">Culture characteristics.</paragraph>
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on PDA (Figure 2, PE75, 98), superficial, white to yellow-white, rings with irregular, undulate edge and curled, raised on the surface media; reverse yellow-white to yellow at the margin and dark-brown at the centre. Sporulating in culture after 2 months.
|
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</paragraph>
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<paragraph pageId="24" pageNumber="49">GenBank numbers.</paragraph>
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<paragraph pageId="24" pageNumber="49">MFLUCC 17-0556 ITS=MG646971, LSU=MG646950, SSU=MG646977. MFLUCC 17-0606 ITS=MG646972, LSU=MG646951, SSU=MG646980.</paragraph>
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<paragraph id="BFE8BEDEB9E37E2A76DC90DDDDE325C4" pageId="24" pageNumber="49">GenBank numbers.</paragraph>
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<paragraph id="81166363A3F841960E3979B0CE5DFC0F" pageId="24" pageNumber="49">MFLUCC 17-0556 ITS=MG646971, LSU=MG646950, SSU=MG646977. MFLUCC 17-0606 ITS=MG646972, LSU=MG646951, SSU=MG646980.</paragraph>
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<subSubSection pageId="24" pageNumber="49" type="notes">
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<paragraph pageId="24" pageNumber="49">Notes.</paragraph>
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<paragraph pageId="24" pageNumber="49">
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||||
<taxonomicName class="Saccharomycetes" family="Debaryomycetaceae" genus="Meyerozyma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Meyerozyma caribbica" order="Saccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="caribbica">Meyerozyma caribbica</taxonomicName>
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<subSubSection id="7DA50838E6AB34BEAF7CD61FF7F46A1C" pageId="24" pageNumber="49" type="notes">
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<paragraph id="B2D00F6CE4E7EB7746FF6F8FF5982925" pageId="24" pageNumber="49">Notes.</paragraph>
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<paragraph id="AB7E92FC51BED466A6738DE61D8C83AC" pageId="24" pageNumber="49">
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<taxonomicName id="8001DD69D876BB29ED0D67A56E808CC8" class="Saccharomycetes" family="Debaryomycetaceae" genus="Meyerozyma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Meyerozyma caribbica" order="Saccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="caribbica">Meyerozyma caribbica</taxonomicName>
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collected in this study is represented by two endophytic isolates from
|
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<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="24" pageNumber="49" rank="family">Pandanaceae</taxonomicName>
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<taxonomicName id="B62AE9C2DA37808DEA5D8B34DEC7371A" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="24" pageNumber="49" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
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||||
. Phylogenetic analysis also supported the identification of this sample as
|
||||
<taxonomicName class="Saccharomycetes" family="Debaryomycetaceae" genus="Meyerozyma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Meyerozyma caribbica" order="Saccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="caribbica">Meyerozyma caribbica</taxonomicName>
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<taxonomicName id="78A1969FADCC437D4AB9F9689FFDEB89" class="Saccharomycetes" family="Debaryomycetaceae" genus="Meyerozyma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Meyerozyma caribbica" order="Saccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="caribbica">Meyerozyma caribbica</taxonomicName>
|
||||
.
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||||
</paragraph>
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</subSubSection>
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||||
|
|
|
|||
|
|
@ -1,201 +1,201 @@
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<treatment ID-GBIF-Taxon="142664206" LSID="urn:lsid:plazi:treatment:B1D766B403ACC7C8D4CD520C2EDED711" httpUri="http://treatment.plazi.org/id/B1D766B403ACC7C8D4CD520C2EDED711" lastPageNumber="36" pageId="11" pageNumber="36">
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<taxonomicName LSID=" MB823838" authority="Tibpromma & K. D. Hyde" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium endophyticum" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="endophyticum">Cladosporium endophyticum Tibpromma & K.D. Hyde</taxonomicName>
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<taxonomicNameLabel pageId="11" pageNumber="36">sp. nov.</taxonomicNameLabel>
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<treatment id="B1D766B403ACC7C8D4CD520C2EDED711" ID-GBIF-Taxon="142664206" LSID="urn:lsid:plazi:treatment:B1D766B403ACC7C8D4CD520C2EDED711" httpUri="http://treatment.plazi.org/id/B1D766B403ACC7C8D4CD520C2EDED711" lastPageNumber="36" pageId="11" pageNumber="36" scope_order="Capnodiales" scope_phylum="Ascomycota">
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<taxonomicName id="49201A46A9265E84720BBA9134482EC6" ID-CoL="VQ44" LSID=" MB823838" authority="Tibpromma & K. D. Hyde" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium endophyticum" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="endophyticum">Cladosporium endophyticum Tibpromma & K.D. Hyde</taxonomicName>
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<taxonomicNameLabel id="B66ACE4C43682293CE1AD2810285309A" pageId="11" pageNumber="36">sp. nov.</taxonomicNameLabel>
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Figure 8
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</paragraph>
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</subSubSection>
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<subSubSection pageId="11" pageNumber="36" type="etymology">
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<paragraph pageId="11" pageNumber="36">Etymology.</paragraph>
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<paragraph pageId="11" pageNumber="36">named after its status as an endophytic fungus.</paragraph>
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<paragraph id="1EB1B38724E8A5B3ADA3585C2D5DFADD" pageId="11" pageNumber="36">named after its status as an endophytic fungus.</paragraph>
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<paragraph pageId="11" pageNumber="36">Holotype.</paragraph>
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<paragraph pageId="11" pageNumber="36">MFLU 18-0005</paragraph>
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<paragraph pageId="11" pageNumber="36">Description.</paragraph>
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<paragraph id="E857CF645D19FE8E4F7F82C5383CEADA" pageId="11" pageNumber="36">Description.</paragraph>
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on PDA attaining 9 cm diam. in six weeks at room temperature, slow growing, dark olivaceous.
|
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<taxonomicName genus="Mycelium" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Mycelium" pageId="11" pageNumber="36" phylum="Basidiomycota" rank="genus">Mycelium</taxonomicName>
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superficial and immersed composed of septate, branched, 2.3-4.5
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wide, sub-hyaline, with smooth and thick-walled hyphae. Sexual morph Undetermined. Asexual morph
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6-10
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high, 3-4
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diam. (x̄ = 8.24
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3.52
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, n = 10), terminal and intercalary, cylindrical or sub-cylindrical, darkened conidiogenous loci.
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<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
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3-6
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2-4
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<normalizedToken id="66474CA467F200639FCB5A4C97AFFE72" originalValue="µm">µm</normalizedToken>
|
||||
(x̄ = 3.64
|
||||
<normalizedToken originalValue="×">x</normalizedToken>
|
||||
<normalizedToken id="BFEB9FD307423FC3CBB1B188D4D9CBD6" originalValue="×">x</normalizedToken>
|
||||
2.75
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="2731778325A1285392C511F415941AFB" originalValue="µm">µm</normalizedToken>
|
||||
, n = 30), forming long branched chains, hyaline to pale-olivaceous, smooth and thin-walled, aseptate, globose to ovoid with rounded ends.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="11" pageNumber="36" type="description">
|
||||
<paragraph pageId="11" pageNumber="36">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="11" pageNumber="36">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="11" pageNumber="36" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="098670E637337F9822F1D40E6C50F152" pageId="11" pageNumber="36" type="description">
|
||||
<paragraph id="7D3C4A0DE69B4A6F27186A4EE297AE00" pageId="11" pageNumber="36">Culture characteristics.</paragraph>
|
||||
<paragraph id="C8B51EAEE7436B96B721C37D381B6C6A" pageId="11" pageNumber="36">
|
||||
<taxonomicName id="206F0662C7BD47AFA8905D9248ADA645" genus="Colonies" lsidName="Colonies" pageId="11" pageNumber="36" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, PE58), superficial, dark olivaceous with dark-grey centre, irregular, undulate with wrinkled and raised on surface media; reverse dark olivaceous. Generative hyphae simple-septate, branched, sub-hyaline, guttules, thick-walled (Figure 8).
|
||||
</paragraph>
|
||||
<caption pageId="11" pageNumber="36">
|
||||
<paragraph pageId="11" pageNumber="36">
|
||||
<caption id="17AD7A9C439E52F96FA75C5CBCF8B141" pageId="11" pageNumber="36">
|
||||
<paragraph id="23BBDC43F90A1AE8EA98C4BBE262937D" pageId="11" pageNumber="36">
|
||||
Figure 8.
|
||||
<taxonomicName class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium endophyticum" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="endophyticum">Cladosporium endophyticum</taxonomicName>
|
||||
<taxonomicName id="9C000939338A802478B4CDC3C907C1F4" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium endophyticum" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="endophyticum">Cladosporium endophyticum</taxonomicName>
|
||||
(MFLU 18-0005, holotype). a Colony on MEA media b
|
||||
<taxonomicName genus="Mycelium" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Mycelium" pageId="11" pageNumber="36" phylum="Basidiomycota" rank="genus">Mycelium</taxonomicName>
|
||||
<taxonomicName id="B673334F73EFB215C06390A3957FE690" genus="Mycelium" lsidName="Mycelium" pageId="11" pageNumber="36" rank="genus">Mycelium</taxonomicName>
|
||||
masses
|
||||
<normalizedToken originalValue="c–e">c-e</normalizedToken>
|
||||
<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
|
||||
<normalizedToken id="431CA19A4266449CA5092ED45824AE1A" originalValue="c–e">c-e</normalizedToken>
|
||||
<taxonomicName id="C790B6A2DE076C6854EE7526E1C14448" genus="Conidia" lsidName="Conidia" pageId="11" pageNumber="36" rank="genus">Conidia</taxonomicName>
|
||||
and conidiogenous cells f, g
|
||||
<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
|
||||
<taxonomicName id="E8AE1865673C150B68EA3EF04B8EBFB4" genus="Conidia" lsidName="Conidia" pageId="11" pageNumber="36" rank="genus">Conidia</taxonomicName>
|
||||
h
|
||||
<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
|
||||
<taxonomicName id="FFC7E34D5837EF437FB6C48729FEB6AF" genus="Conidia" lsidName="Conidia" pageId="11" pageNumber="36" rank="genus">Conidia</taxonomicName>
|
||||
and conidiogenous cells. Scale bars: 5
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="C354F12B7F719C0E1200E844EE6B6096" originalValue="µm">µm</normalizedToken>
|
||||
(
|
||||
<normalizedToken originalValue="b–h">b-h</normalizedToken>
|
||||
<normalizedToken id="97C30EAD26946E480BAF6DE09B61A267" originalValue="b–h">b-h</normalizedToken>
|
||||
), 10
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="823E0269964897D8B23BAE2B2E55D76B" originalValue="µm">µm</normalizedToken>
|
||||
(h).
|
||||
</paragraph>
|
||||
</caption>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="11" pageNumber="36" type="materials_examined">
|
||||
<paragraph pageId="11" pageNumber="36">Material examined.</paragraph>
|
||||
<paragraph pageId="11" pageNumber="36">
|
||||
<subSubSection id="CF180B5977ACDFA907D86343D9028416" pageId="11" pageNumber="36" type="materials_examined">
|
||||
<paragraph id="1CFE0F2D26C5E60FE7CE876034EBA6D9" pageId="11" pageNumber="36">Material examined.</paragraph>
|
||||
<paragraph id="7E9B14DA7176B9D5D9B93D9929C018B8" pageId="11" pageNumber="36">
|
||||
THAILAND, Chumphon, Pathio District, on healthy leaves of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="11" pageNumber="36" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="FBD43EA0BD827464A2AE6243DA37CF74" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="11" pageNumber="36" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. (
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="11" pageNumber="36" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="8D99D8FF21B6D4BCAEB9270486678EBF" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="11" pageNumber="36" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
), 1 December 2016, S. Tibpromma PE58 (MFLU 18-0005, holotype); HKAS100855, paratype, ex-type living cultures, MFLUCC 17-0599 = KUMCC 17-0294.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="11" pageNumber="36" type="genbank numbers">
|
||||
<paragraph pageId="11" pageNumber="36">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="11" pageNumber="36">ITS=MG646956, LSU=MG646949, SSU=MG646981, TEF1=MG646988.</paragraph>
|
||||
<subSubSection id="95E306830FF9E93F4549FFB4F5FBA8AE" pageId="11" pageNumber="36" type="genbank numbers">
|
||||
<paragraph id="2708B9E2619A929D23751F84F32AEA4D" pageId="11" pageNumber="36">GenBank numbers.</paragraph>
|
||||
<paragraph id="E68B0EBAF0441F43188927E18D4246BB" pageId="11" pageNumber="36">ITS=MG646956, LSU=MG646949, SSU=MG646981, TEF1=MG646988.</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="11" pageNumber="36" type="notes">
|
||||
<paragraph pageId="11" pageNumber="36">Notes.</paragraph>
|
||||
<paragraph pageId="11" pageNumber="36">
|
||||
<taxonomicName class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium endophyticum" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="endophyticum">Cladosporium endophyticum</taxonomicName>
|
||||
<subSubSection id="BD63E92412A8F9C3418703291294FAA3" pageId="11" pageNumber="36" type="notes">
|
||||
<paragraph id="4FAE8A128B88EF7C88AA05646732934A" pageId="11" pageNumber="36">Notes.</paragraph>
|
||||
<paragraph id="9B7B689A3D05F9B20917AD79A1C4E544" pageId="11" pageNumber="36">
|
||||
<taxonomicName id="14A22062964CBB1DFE1F6E29D9445216" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium endophyticum" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="endophyticum">Cladosporium endophyticum</taxonomicName>
|
||||
was isolated as an endophyte from
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="11" pageNumber="36" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="887C2DF45FEE906FC5859004E211183C" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="11" pageNumber="36" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. in Thailand. In the phylogenetic analysis of combined gene sequence data of ITS, LSU, SSU and TEF1, the new taxon
|
||||
<taxonomicName class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium endophyticum" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="endophyticum">Cladosporium endophyticum</taxonomicName>
|
||||
<taxonomicName id="37D70FC79FDA55C0C9F9085265FEE1BA" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium endophyticum" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="endophyticum">Cladosporium endophyticum</taxonomicName>
|
||||
is sister to
|
||||
<taxonomicName lsidName="C. halotolerans" pageId="11" pageNumber="36" rank="species" species="halotolerans">C. halotolerans</taxonomicName>
|
||||
<taxonomicName id="FD1FB18CA1C7033A33BF931B7BEB605C" lsidName="C. halotolerans" pageId="11" pageNumber="36" rank="species" species="halotolerans">C. halotolerans</taxonomicName>
|
||||
(Figure 7), but well-separated with high bootstrap support (90% in ML). Moreover, the morphology of this new taxon was compared with
|
||||
<taxonomicName class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium halotolerans" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="halotolerans">Cladosporium halotolerans</taxonomicName>
|
||||
<taxonomicName id="5B825A8DC7F16DD2A4A78DD419660E9B" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium halotolerans" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="halotolerans">Cladosporium halotolerans</taxonomicName>
|
||||
which has brown to dark brown, subglobose to globose with verrucose, less often short-ovoid conidia, narrower at both ends (
|
||||
<bibRefCitation author="Zalar, P" journalOrPublisher="Studies in Mycology" pageId="38" pageNumber="63" pagination="157 - 183" title="Phylogeny and ecology of the ubiquitous saprobe Cladosporiumsphaerospermum, with descriptions of seven new species from hypersaline environments." url="https://doi.org/10.3114/sim.2007.58.06" volume="58" year="2007">Zalar et al. 2007</bibRefCitation>
|
||||
<bibRefCitation id="480EAF047D193BFB353506BCE5E7464F" author="Zalar, P" journalOrPublisher="Studies in Mycology" pageId="38" pageNumber="63" pagination="157 - 183" title="Phylogeny and ecology of the ubiquitous saprobe Cladosporiumsphaerospermum, with descriptions of seven new species from hypersaline environments." url="https://doi.org/10.3114/sim.2007.58.06" volume="58" year="2007">Zalar et al. 2007</bibRefCitation>
|
||||
), while
|
||||
<taxonomicName lsidName="C. endophyticum" pageId="11" pageNumber="36" rank="species" species="endophyticum">C. endophyticum</taxonomicName>
|
||||
<taxonomicName id="0D5F40E83C8344D26C78F05BC71F15FE" lsidName="C. endophyticum" pageId="11" pageNumber="36" rank="species" species="endophyticum">C. endophyticum</taxonomicName>
|
||||
has globose to ovoid, hyaline to pale-olivaceous conidia with rounded ends. Here, the authors introduce the new species
|
||||
<taxonomicName lsidName="C. endophyticum" pageId="11" pageNumber="36" rank="species" species="endophyticum">C. endophyticum</taxonomicName>
|
||||
<taxonomicName id="166C866751C2A1CF777C67FCA7A74E6A" lsidName="C. endophyticum" pageId="11" pageNumber="36" rank="species" species="endophyticum">C. endophyticum</taxonomicName>
|
||||
and provide an updated phylogenetic tree for the genus
|
||||
<taxonomicName class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Cladosporium</taxonomicName>
|
||||
<taxonomicName id="0EA032FBA4830E15D2E8BD9AE971E0BD" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Cladosporium</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,145 +1,145 @@
|
|||
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<mods:namePart>Yang, Jun-Bo</mods:namePart>
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<treatment ID-GBIF-Taxon="142664155" LSID="urn:lsid:plazi:treatment:BA9AEDC79184D45125D0927D07DDC3EC" httpUri="http://treatment.plazi.org/id/BA9AEDC79184D45125D0927D07DDC3EC" lastPageNumber="47" pageId="22" pageNumber="47">
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<taxonomicName authority="Corda, 1842" authorityName="Corda" authorityYear="1842" family="Sporocadaceae" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Mycelium" order="Xylariales" pageId="22" pageNumber="47" rank="family">Sporocadaceae Corda, 1842</taxonomicName>
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<treatment id="BA9AEDC79184D45125D0927D07DDC3EC" ID-GBIF-Taxon="142664155" LSID="urn:lsid:plazi:treatment:BA9AEDC79184D45125D0927D07DDC3EC" httpUri="http://treatment.plazi.org/id/BA9AEDC79184D45125D0927D07DDC3EC" lastPageNumber="47" pageId="22" pageNumber="47" scope_order="Diaporthales" scope_phylum="Ascomycota">
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<taxonomicName id="C8F702B4C508F27B6ACF881C75D96503" authority="Corda, 1842" authorityName="Corda" authorityYear="1842" class="Sordariomycetes" family="Sporocadaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Xylariales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="family">Sporocadaceae Corda, 1842</taxonomicName>
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<paragraph pageId="22" pageNumber="47">Remarks.</paragraph>
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<paragraph pageId="22" pageNumber="47">
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<taxonomicName genus="Sporocadaceae" lsidName="Sporocadaceae" pageId="22" pageNumber="47" rank="genus">Sporocadaceae</taxonomicName>
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<paragraph id="5D8837AE629598612D3CBFE95186510B" pageId="22" pageNumber="47">
|
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<taxonomicName id="036EBB347E285187CC6162920DCEC34C" genus="Sporocadaceae" lsidName="Sporocadaceae" pageId="22" pageNumber="47" rank="genus">Sporocadaceae</taxonomicName>
|
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was introduced by Corda (1842) with
|
||||
<taxonomicName class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Pestalotiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pestalotiopsis" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Pestalotiopsis</taxonomicName>
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<taxonomicName id="8E89A2EF5717941CF7497AA8169AEE59" class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Pestalotiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pestalotiopsis" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Pestalotiopsis</taxonomicName>
|
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-like asexual morphs and confirmed by
|
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<bibRefCitation author="Senanayake, IC" journalOrPublisher="Fungal Diversity" pageId="35" pageNumber="60" pagination="73 - 144" title="Towards unraveling relationships in Xylariomycetidae (Sordariomycetes)." url="https://doi.org/10.1007/s13225-015-0340-y" volume="73" year="2015">Senanayake et al. (2015)</bibRefCitation>
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<bibRefCitation id="B1C55D276A8714898B6A116B30530A6D" author="Senanayake, IC" journalOrPublisher="Fungal Diversity" pageId="35" pageNumber="60" pagination="73 - 144" title="Towards unraveling relationships in Xylariomycetidae (Sordariomycetes)." url="https://doi.org/10.1007/s13225-015-0340-y" volume="73" year="2015">Senanayake et al. (2015)</bibRefCitation>
|
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. Members of
|
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<taxonomicName genus="Sporocadaceae" lsidName="Sporocadaceae" pageId="22" pageNumber="47" rank="genus">Sporocadaceae</taxonomicName>
|
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<taxonomicName id="DFFD143320556965C0668D78D2155549" genus="Sporocadaceae" lsidName="Sporocadaceae" pageId="22" pageNumber="47" rank="genus">Sporocadaceae</taxonomicName>
|
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are saprobes, endophytes or foliar pathogens in tropical and temperate regions (
|
||||
<bibRefCitation author="Jeewon, R" journalOrPublisher="Fungal Diversity" pageId="31" pageNumber="56" pagination="39 - 55" title="Phylogenetic evaluation of species nomenclature of Pestalotiopsis in relation to host association." volume="17" year="2004">Jeewon et al. 2004</bibRefCitation>
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<bibRefCitation id="3B788790BA38397F1BFB1CC2585D63E8" author="Jeewon, R" journalOrPublisher="Fungal Diversity" pageId="31" pageNumber="56" pagination="39 - 55" title="Phylogenetic evaluation of species nomenclature of Pestalotiopsis in relation to host association." volume="17" year="2004">Jeewon et al. 2004</bibRefCitation>
|
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;
|
||||
<bibRefCitation author="Tanaka, K" journalOrPublisher="Persoonia" pageId="35" pageNumber="60" pagination="85 - 98" title="Phylogeny of Discosia and Seimatosporium, and introduction of Adisciso and Immersidiscosia genera nova." url="https://doi.org/10.3767/003158511X576666" volume="26" year="2011">Tanaka et al. 2011</bibRefCitation>
|
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<bibRefCitation id="3D0684903423A57CEC2617EF326C4697" author="Tanaka, K" journalOrPublisher="Persoonia" pageId="35" pageNumber="60" pagination="85 - 98" title="Phylogeny of Discosia and Seimatosporium, and introduction of Adisciso and Immersidiscosia genera nova." url="https://doi.org/10.3767/003158511X576666" volume="26" year="2011">Tanaka et al. 2011</bibRefCitation>
|
||||
).
|
||||
<taxonomicName class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Pestalotiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pestalotiopsis" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Pestalotiopsis</taxonomicName>
|
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<taxonomicName id="EFAF13AF6853857C79608B4FE612F8ED" class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Pestalotiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pestalotiopsis" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Pestalotiopsis</taxonomicName>
|
||||
can be found as saprobes or pathogens worldwide (
|
||||
<bibRefCitation author="Jeewon, R" journalOrPublisher="Molecular Phylogenetics and Evolution" pageId="30" pageNumber="55" pagination="378 - 392" title="Phylogenetic relationships of Pestalotiopsis and allied genera inferred from ribosomal DNA sequences and morphological characters." url="https://doi.org/10.1016/S1055-7903(02)00422-0" volume="25" year="2002">Jeewon et al. 2002</bibRefCitation>
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<bibRefCitation id="4BA59993C51AF7B65028DD6715119308" author="Jeewon, R" journalOrPublisher="Molecular Phylogenetics and Evolution" pageId="30" pageNumber="55" pagination="378 - 392" title="Phylogenetic relationships of Pestalotiopsis and allied genera inferred from ribosomal DNA sequences and morphological characters." url="https://doi.org/10.1016/S1055-7903(02)00422-0" volume="25" year="2002">Jeewon et al. 2002</bibRefCitation>
|
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,
|
||||
<bibRefCitation author="Jeewon, R" journalOrPublisher="Molecular Phylogenetics and Evolution" pageId="31" pageNumber="56" pagination="372 - 383" title="Phylogenetic significance of morphological characters in the taxonomy of Pestalotiopsis species." url="https://doi.org/10.1016/S1055-7903(03)00010-1" volume="27" year="2003">2003</bibRefCitation>
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<bibRefCitation id="BFD2800B2EB85C308C3DFE487E7C9C84" author="Jeewon, R" journalOrPublisher="Molecular Phylogenetics and Evolution" pageId="31" pageNumber="56" pagination="372 - 383" title="Phylogenetic significance of morphological characters in the taxonomy of Pestalotiopsis species." url="https://doi.org/10.1016/S1055-7903(03)00010-1" volume="27" year="2003">2003</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Maharachchikumbura, SSN" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="167 - 187" title="Pestalotiopsis-morphology, phylogeny, biochemistry and diversity." url="https://doi.org/10.1007/s13225-011-0125-x" volume="50" year="2011">Maharachchikumbura et al. 2011</bibRefCitation>
|
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<bibRefCitation id="0B102B198CBD08AAAE0044346A462142" author="Maharachchikumbura, SSN" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="167 - 187" title="Pestalotiopsis-morphology, phylogeny, biochemistry and diversity." url="https://doi.org/10.1007/s13225-011-0125-x" volume="50" year="2011">Maharachchikumbura et al. 2011</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Maharachchikumbura, SSN" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="95 - 129" title="A multi-locus backbone tree for Pestalotiopsis, with a polyphasic characterization of 14 new species." url="https://doi.org/10.1007/s13225-012-0198-1" volume="56" year="2012">2012</bibRefCitation>
|
||||
<bibRefCitation id="13A6ABE8CE62FA4ABB2863F2963A736E" author="Maharachchikumbura, SSN" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="95 - 129" title="A multi-locus backbone tree for Pestalotiopsis, with a polyphasic characterization of 14 new species." url="https://doi.org/10.1007/s13225-012-0198-1" volume="56" year="2012">2012</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Maharachchikumbura, SSN" journalOrPublisher="Tropical Plant Pathology" pageId="32" pageNumber="57" pagination="227 - 235" title="A destructive new disease of Syzygiumsamarangense in Thailand caused by the new species Pestalotiopsissamarangensis." url="http://dx.doi.org/10.1590/S1982-56762013005000002" volume="38" year="2013">2013</bibRefCitation>
|
||||
<bibRefCitation id="29D98C06EE4846A83F6CF615F004D5E8" author="Maharachchikumbura, SSN" journalOrPublisher="Tropical Plant Pathology" pageId="32" pageNumber="57" pagination="227 - 235" title="A destructive new disease of Syzygiumsamarangense in Thailand caused by the new species Pestalotiopsissamarangensis." url="http://dx.doi.org/10.1590/S1982-56762013005000002" volume="38" year="2013">2013</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Maharachchikumbura, SSN" journalOrPublisher="Mycological Progress" pageId="32" pageNumber="57" pagination="617 - 624" title="Improving the backbone tree for the genus Pestalotiopsis; addition of P. steyaertii and P. magna sp. nov." url="https://doi.org/10.1007/s11557-013-0944-0" volume="13" year="2014 a">2014a</bibRefCitation>
|
||||
<bibRefCitation id="CA5259A4E7214B982B51CEB5C2EC753A" author="Maharachchikumbura, SSN" journalOrPublisher="Mycological Progress" pageId="32" pageNumber="57" pagination="617 - 624" title="Improving the backbone tree for the genus Pestalotiopsis; addition of P. steyaertii and P. magna sp. nov." url="https://doi.org/10.1007/s11557-013-0944-0" volume="13" year="2014 a">2014a</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Maharachchikumbura, SSN" journalOrPublisher="Studies in Mycology" pageId="32" pageNumber="57" pagination="121 - 186" title="Pestalotiopsis revisited." url="https://doi.org/10.1016/j.simyco.2014.09.005" volume="79" year="2014 b">b</bibRefCitation>
|
||||
<bibRefCitation id="FC91000B71B8BA7B3D83F3DF0561B674" author="Maharachchikumbura, SSN" journalOrPublisher="Studies in Mycology" pageId="32" pageNumber="57" pagination="121 - 186" title="Pestalotiopsis revisited." url="https://doi.org/10.1016/j.simyco.2014.09.005" volume="79" year="2014 b">b</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Maharachchikumbura, SSN" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" url="https://doi.org/10.1007/s11557-016-1162-3" year="2016 a">2016a</bibRefCitation>
|
||||
<bibRefCitation id="7A78613F894543F3C3CD47B163594102" author="Maharachchikumbura, SSN" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" url="https://doi.org/10.1007/s11557-016-1162-3" year="2016 a">2016a</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Maharachchikumbura, SSN" journalOrPublisher="Phytopathologia Mediterranea" pageId="33" pageNumber="58" pagination="380 - 390" title="Characterization of Neopestalotiopsis, Pestalotiopsis and Truncatella species associated with grapevine trunk diseases in France." url="http://dx.doi.org/10.14601/Phytopathol_Mediterr-18298" volume="55" year="2016 c">c</bibRefCitation>
|
||||
<bibRefCitation id="0DECE5D8F319E914C0A23B2FE28B6878" author="Maharachchikumbura, SSN" journalOrPublisher="Phytopathologia Mediterranea" pageId="33" pageNumber="58" pagination="380 - 390" title="Characterization of Neopestalotiopsis, Pestalotiopsis and Truncatella species associated with grapevine trunk diseases in France." url="http://dx.doi.org/10.14601/Phytopathol_Mediterr-18298" volume="55" year="2016 c">c</bibRefCitation>
|
||||
). Recently,
|
||||
<bibRefCitation author="Chen, YY" journalOrPublisher="Mycosphere" pageId="27" pageNumber="52" pagination="103 - 110" title="Fungi from Asian Karst formations I. Pestalotiopsisphotinicola sp. nov., causing leaf spots of Photiniaserrulata." url="https://doi.org/10.5943/mycosphere/8/1/9" volume="8" year="2017">Chen et al. (2017)</bibRefCitation>
|
||||
<bibRefCitation id="D17FF816469B370BC2361ECF3D71DB4C" author="Chen, YY" journalOrPublisher="Mycosphere" pageId="27" pageNumber="52" pagination="103 - 110" title="Fungi from Asian Karst formations I. Pestalotiopsisphotinicola sp. nov., causing leaf spots of Photiniaserrulata." url="https://doi.org/10.5943/mycosphere/8/1/9" volume="8" year="2017">Chen et al. (2017)</bibRefCitation>
|
||||
provided updates for this genus based on morphology and phylogeny. In this study, two known species of
|
||||
<taxonomicName class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Pestalotiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pestalotiopsis" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Pestalotiopsis</taxonomicName>
|
||||
<taxonomicName id="413E9F1E329CF232F82EE5AF5229BB88" class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Pestalotiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pestalotiopsis" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="genus">Pestalotiopsis</taxonomicName>
|
||||
from
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="22" pageNumber="47" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="B9F1459C79B54C0EC747B5611FB17024" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="22" pageNumber="47" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
hosts were isolated.
|
||||
</paragraph>
|
||||
<caption pageId="22" pageNumber="47">
|
||||
<paragraph pageId="22" pageNumber="47">
|
||||
<caption id="0803AD2AD5319C0346898DEBBAC1BBA1" pageId="22" pageNumber="47">
|
||||
<paragraph id="5690629BDB79C30444AD527630594B7A" pageId="22" pageNumber="47">
|
||||
Figure 18. Phylogram generated from maximum likelihood analysis based on the combination of ITS,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="B1A12AB388280DBE4C0B3A0B7D899C2F" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
and TEF1 sequenced data. Maximum parsimony bootstrap is given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with
|
||||
<taxonomicName class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Seiridium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Seiridium camelliae" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="camelliae">Seiridium camelliae</taxonomicName>
|
||||
<taxonomicName id="197B32C064552C3BAABF5ADD8F7C0914" class="Sordariomycetes" family="Pestalotiopsidaceae" genus="Seiridium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Seiridium camelliae" order="Amphisphaeriales" pageId="22" pageNumber="47" phylum="Ascomycota" rank="species" species="camelliae">Seiridium camelliae</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
|
|
@ -1,126 +1,126 @@
|
|||
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<treatment ID-GBIF-Taxon="142664207" LSID="urn:lsid:plazi:treatment:C043E8C1ABE4CCA09BCABE485D1D1AA3" httpUri="http://treatment.plazi.org/id/C043E8C1ABE4CCA09BCABE485D1D1AA3" lastPageNumber="36" pageId="11" pageNumber="36">
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<taxonomicName authority="Link, 1816" authorityName="Link" authorityYear="1816" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Cladosporium Link, 1816</taxonomicName>
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<taxonomicName id="7D8A4E26D37E99F1C706F8A000A766E0" ID-CoL="3QF6" authority="Link, 1816" authorityName="Link" authorityYear="1816" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Cladosporium Link, 1816</taxonomicName>
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<paragraph pageId="11" pageNumber="36">Remarks.</paragraph>
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The genus
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(
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,
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) is a large genus of the
|
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|
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(
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<bibRefCitation author="Wijayawardene, NN" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="1 - 594" title="Notes for genera: Ascomycota." url="https://doi.org/10.1007/s13225-017-0386-0" volume="86" year="2017">Wijayawardene et al. 2017</bibRefCitation>
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<bibRefCitation id="237A885428CF09511E47146457813137" author="Wijayawardene, NN" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="1 - 594" title="Notes for genera: Ascomycota." url="https://doi.org/10.1007/s13225-017-0386-0" volume="86" year="2017">Wijayawardene et al. 2017</bibRefCitation>
|
||||
). The genus comprises species that are saprobes, endophytes and pathogens. A few species have been documented as being etiologic agents in vertebrate hosts (
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||||
<bibRefCitation pageId="11" pageNumber="36">David 1997</bibRefCitation>
|
||||
<bibRefCitation id="9E127F7595BAB1A6A9E224530C56D821" pageId="11" pageNumber="36">David 1997</bibRefCitation>
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;
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<bibRefCitation author="Bensch, K" journalOrPublisher="Studies in Mycology" pageId="27" pageNumber="52" pagination="1 - 401" title="The genus Cladosporium." url="https://doi.org/10.1016/S0166-0616(14)60070-1" volume="72" year="2012">Bensch et al. 2012</bibRefCitation>
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<bibRefCitation id="A04CA456052263410E944260267F984C" author="Bensch, K" journalOrPublisher="Studies in Mycology" pageId="27" pageNumber="52" pagination="1 - 401" title="The genus Cladosporium." url="https://doi.org/10.1016/S0166-0616(14)60070-1" volume="72" year="2012">Bensch et al. 2012</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Bensch, K" journalOrPublisher="Studies in Mycology" pageId="27" pageNumber="52" pagination="23 - 74" title="Common but different: The expanding realm of Cladosporium." url="https://doi.org/10.1016/j.simyco.2015.10.001" volume="82" year="2015">2015</bibRefCitation>
|
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<bibRefCitation id="7B1F7189B5CD669ACE8EB08989CFF872" author="Bensch, K" journalOrPublisher="Studies in Mycology" pageId="27" pageNumber="52" pagination="23 - 74" title="Common but different: The expanding realm of Cladosporium." url="https://doi.org/10.1016/j.simyco.2015.10.001" volume="82" year="2015">2015</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Crous, PW" journalOrPublisher="Studies in Mycology" pageId="28" pageNumber="53" url="https://doi.org/10.3767/003158514X682395" year="2014">Crous et al. 2014</bibRefCitation>
|
||||
<bibRefCitation id="3C5522209F529C4428BB520C73B1A46C" author="Crous, PW" journalOrPublisher="Studies in Mycology" pageId="28" pageNumber="53" url="https://doi.org/10.3767/003158514X682395" year="2014">Crous et al. 2014</bibRefCitation>
|
||||
). In this study, a new species of
|
||||
<taxonomicName class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Cladosporium</taxonomicName>
|
||||
<taxonomicName id="8F7D3D59621CB6EEDB97040B41AC09CA" class="Dothideomycetes" family="Cladosporiaceae" genus="Cladosporium" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cladosporium" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="genus">Cladosporium</taxonomicName>
|
||||
is described, with high bootstrap support in the phylogenetic analysis (Figure 7).
|
||||
</paragraph>
|
||||
<caption pageId="11" pageNumber="36">
|
||||
<paragraph pageId="11" pageNumber="36">
|
||||
<caption id="42C342EC0C5A96B76845B43E10807EC5" pageId="11" pageNumber="36">
|
||||
<paragraph id="884214717B18AE13B29661CAAD392ED2" pageId="11" pageNumber="36">
|
||||
Figure 7. Phylogram generated from maximum likelihood analysis based on ITS, TEF1 and Actin sequenced data. Maximum likelihood bootstrap is given above/below the nodes. The newly generated sequences in red bold. The tree is rooted with
|
||||
<taxonomicName class="Dothideomycetes" family="Mycosphaerellaceae" genus="Cercospora" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cercospora beticola" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="beticola">Cercospora beticola</taxonomicName>
|
||||
<taxonomicName id="E2D8CDAD04EFE5157850C8B5E3A1CE00" class="Dothideomycetes" family="Mycosphaerellaceae" genus="Cercospora" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Cercospora beticola" order="Capnodiales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="beticola">Cercospora beticola</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
|
|
@ -1,120 +1,120 @@
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<taxonomicName id="D8E59D1E360E51EB19078935359A3867" class="Saccharomycetes" family="Debaryomycetaceae" genus="Meyerozyma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Meyerozyma" order="Saccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="genus">Meyerozyma</taxonomicName>
|
||||
belongs to family
|
||||
<taxonomicName genus="Debaryomycetaceae" lsidName="Debaryomycetaceae" pageId="24" pageNumber="49" rank="genus">Debaryomycetaceae</taxonomicName>
|
||||
<taxonomicName id="4AEAB011E3A73AD1235AF019A8296DD1" genus="Debaryomycetaceae" lsidName="Debaryomycetaceae" pageId="24" pageNumber="49" rank="genus">Debaryomycetaceae</taxonomicName>
|
||||
and was detailed in
|
||||
<bibRefCitation author="Kurtzman, CP" journalOrPublisher="Mycoscience" pageId="31" pageNumber="56" pagination="2 - 14" title="Phylogenetic analysis of ascomycete yeasts that form coenzyme Q- 9 and the proposal of the new genera Babjeviella, Meyerozyma, Millerozyma, Priceomyces, and Scheffersomyces." url="https://doi.org/10.1007/S10267-009-0011-5" volume="51" year="2010">Kurtzman and Suzuki (2010)</bibRefCitation>
|
||||
<bibRefCitation id="807A7B35765E652062BA2BF3CD31D1F4" author="Kurtzman, CP" journalOrPublisher="Mycoscience" pageId="31" pageNumber="56" pagination="2 - 14" title="Phylogenetic analysis of ascomycete yeasts that form coenzyme Q- 9 and the proposal of the new genera Babjeviella, Meyerozyma, Millerozyma, Priceomyces, and Scheffersomyces." url="https://doi.org/10.1007/S10267-009-0011-5" volume="51" year="2010">Kurtzman and Suzuki (2010)</bibRefCitation>
|
||||
. In this study,
|
||||
<taxonomicName class="Saccharomycetes" family="Debaryomycetaceae" genus="Meyerozyma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Meyerozyma caribbica" order="Saccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="caribbica">Meyerozyma caribbica</taxonomicName>
|
||||
<taxonomicName id="8247742296F437EF7E6B9A0F9D47CE66" class="Saccharomycetes" family="Debaryomycetaceae" genus="Meyerozyma" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Meyerozyma caribbica" order="Saccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="caribbica">Meyerozyma caribbica</taxonomicName>
|
||||
was found on a
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="24" pageNumber="49" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="CE4A3A0A48B2EECC400D8EE2108F18B2" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="24" pageNumber="49" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
host as an endophytic fungus. Species identification was confirmed by DNA sequence data.
|
||||
</paragraph>
|
||||
<caption pageId="24" pageNumber="49">
|
||||
<paragraph pageId="24" pageNumber="49">
|
||||
<caption id="68B3712DAC803578ABBA5D17B2E50639" pageId="24" pageNumber="49">
|
||||
<paragraph id="12AD5015AC5507960CA41980032A924F" pageId="24" pageNumber="49">
|
||||
Figure 19. Phylogram generated from maximum likelihood analysis based on combined LSU and SSU sequence data. Maximum parsimony bootstrap is given above/below the nodes. The newly generated sequences are in red text. The tree is rooted with
|
||||
<taxonomicName class="Schizosaccharomycetes" family="Schizosaccharomycetaceae" genus="Schizosaccharomyces" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Schizosaccharomyces pombe" order="Schizosaccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="pombe">Schizosaccharomyces pombe</taxonomicName>
|
||||
<taxonomicName id="A0EC307CFEFFD27E0859261443667522" class="Schizosaccharomycetes" family="Schizosaccharomycetaceae" genus="Schizosaccharomyces" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Schizosaccharomyces pombe" order="Schizosaccharomycetales" pageId="24" pageNumber="49" phylum="Ascomycota" rank="species" species="pombe">Schizosaccharomyces pombe</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
|
|
@ -1,142 +1,142 @@
|
|||
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Diaporthaceae
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The family
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(1917) and was placed in the order
|
||||
<taxonomicName genus="Diaporthales" lsidName="Diaporthales" pageId="16" pageNumber="41" rank="genus">Diaporthales</taxonomicName>
|
||||
<taxonomicName id="7698DDD3644D0FE524747898DA4938DB" genus="Diaporthales" lsidName="Diaporthales" pageId="16" pageNumber="41" rank="genus">Diaporthales</taxonomicName>
|
||||
. This family comprised two
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
<taxonomicName id="A112057114139CDE5CC2F8E322172572" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
genera (
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Phomopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phomopsis" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Phomopsis</taxonomicName>
|
||||
<taxonomicName id="CC9D39ADDB79309D0373B59DADDB5058" class="Sordariomycetes" family="Diaporthaceae" genus="Phomopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phomopsis" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Phomopsis</taxonomicName>
|
||||
and
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Mazzantia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mazzantia" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Mazzantia</taxonomicName>
|
||||
<taxonomicName id="A83DA4EF26FCBB6E8AE42BD86356F4CE" class="Sordariomycetes" family="Diaporthaceae" genus="Mazzantia" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mazzantia" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Mazzantia</taxonomicName>
|
||||
) (
|
||||
<bibRefCitation author="Wehmeyer, LE" journalOrPublisher="Mycologia Memoirs" pageId="37" pageNumber="62" pagination="1 - 250" title="The Pyrenomycetous Fungi." volume="6" year="1975">Wehmeyer 1975</bibRefCitation>
|
||||
<bibRefCitation id="13350607DBABEB21CAB06DBA8FCA5C67" author="Wehmeyer, LE" journalOrPublisher="Mycologia Memoirs" pageId="37" pageNumber="62" pagination="1 - 250" title="The Pyrenomycetous Fungi." volume="6" year="1975">Wehmeyer 1975</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Castlebury, LA" journalOrPublisher="Mycologia" pageId="28" pageNumber="53" pagination="1017 - 1031" title="A preliminary overview of the Diaporthales based on large subunit nuclear ribosomal DNA sequences." url="https://doi.org/10.1080/15572536.2003.11833157" volume="94" year="2002">Castlebury et al. 2002</bibRefCitation>
|
||||
<bibRefCitation id="3380A87C17BAEA2AEDA6625DF0FCCC30" author="Castlebury, LA" journalOrPublisher="Mycologia" pageId="28" pageNumber="53" pagination="1017 - 1031" title="A preliminary overview of the Diaporthales based on large subunit nuclear ribosomal DNA sequences." url="https://doi.org/10.1080/15572536.2003.11833157" volume="94" year="2002">Castlebury et al. 2002</bibRefCitation>
|
||||
). Later,
|
||||
<taxonomicName genus="Diaporthaceae" lsidName="Diaporthaceae" pageId="16" pageNumber="41" rank="genus">Diaporthaceae</taxonomicName>
|
||||
<taxonomicName id="16F9FBB8B6C665337EEF9548E0D9747A" genus="Diaporthaceae" lsidName="Diaporthaceae" pageId="16" pageNumber="41" rank="genus">Diaporthaceae</taxonomicName>
|
||||
was given the synonym
|
||||
<taxonomicName genus="Valsaceae" lsidName="Valsaceae" pageId="16" pageNumber="41" rank="genus">Valsaceae</taxonomicName>
|
||||
<taxonomicName id="662EDD4382525DFBEC6E642BD2586088" genus="Valsaceae" lsidName="Valsaceae" pageId="16" pageNumber="41" rank="genus">Valsaceae</taxonomicName>
|
||||
(
|
||||
<bibRefCitation pageId="16" pageNumber="41">Barr 1978</bibRefCitation>
|
||||
<bibRefCitation id="E0A19FED9EB90CD129EA9080112E89A7" pageId="16" pageNumber="41">Barr 1978</bibRefCitation>
|
||||
). Based on DNA sequence data, some other genera have been placed in
|
||||
<taxonomicName genus="Diaporthaceae" lsidName="Diaporthaceae" pageId="16" pageNumber="41" rank="genus">Diaporthaceae</taxonomicName>
|
||||
<taxonomicName id="DAC60246E89759A15577CFB2E875EAC7" genus="Diaporthaceae" lsidName="Diaporthaceae" pageId="16" pageNumber="41" rank="genus">Diaporthaceae</taxonomicName>
|
||||
(
|
||||
<bibRefCitation author="Dai, DQ" journalOrPublisher="Cryptogamie Mycologie" pageId="28" pageNumber="53" pagination="63 - 72" title="Pustulomyces gen. nov. accommodated in Diaporthaceae, Diaporthales, as revealed by morphology and molecular analyses." url="https://doi.org/10.7872/crym.v35.iss1.2014.63" volume="35" year="2014">Dai et al. 2014</bibRefCitation>
|
||||
<bibRefCitation id="C3B21629FA9988E72D89B78B7C3272EC" author="Dai, DQ" journalOrPublisher="Cryptogamie Mycologie" pageId="28" pageNumber="53" pagination="63 - 72" title="Pustulomyces gen. nov. accommodated in Diaporthaceae, Diaporthales, as revealed by morphology and molecular analyses." url="https://doi.org/10.7872/crym.v35.iss1.2014.63" volume="35" year="2014">Dai et al. 2014</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Voglmayr, H" journalOrPublisher="Persoonia" pageId="37" pageNumber="62" pagination="61 - 82" title="Stilbosporaceae resurrected: generic reclassification and speciation." url="https://doi.org/10.3767/003158514X684212" volume="33" year="2014">Voglmayr and Jaklitsch 2014</bibRefCitation>
|
||||
<bibRefCitation id="F31D701FC83D3D11C3D227E723ED5ACF" author="Voglmayr, H" journalOrPublisher="Persoonia" pageId="37" pageNumber="62" pagination="61 - 82" title="Stilbosporaceae resurrected: generic reclassification and speciation." url="https://doi.org/10.3767/003158514X684212" volume="33" year="2014">Voglmayr and Jaklitsch 2014</bibRefCitation>
|
||||
). Recently,
|
||||
<bibRefCitation author="Maharachchikumbura, SS" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" pagination="199 - 301" title="Towards a natural classification and backbone tree for Sordariomycetes." url="https://doi.org/10.1007/s13225-015-0331-z" volume="72" year="2015">Maharachchikumbura et al. (2015)</bibRefCitation>
|
||||
<bibRefCitation id="F9A5FCE3FDE985C575D0CC09D52691D8" author="Maharachchikumbura, SS" journalOrPublisher="Fungal Diversity" pageId="33" pageNumber="58" pagination="199 - 301" title="Towards a natural classification and backbone tree for Sordariomycetes." url="https://doi.org/10.1007/s13225-015-0331-z" volume="72" year="2015">Maharachchikumbura et al. (2015)</bibRefCitation>
|
||||
and
|
||||
<bibRefCitation author="Senanayake, IC" journalOrPublisher="Studies in Mycology" pageId="35" pageNumber="60" pagination="217 - 296" title="Families of Diaporthales based on morphological and phylogenetic evidence." url="https://doi.org/10.1016/j.simyco.2017.07.003" volume="86" year="2017">Senanayake et al. (2017)</bibRefCitation>
|
||||
<bibRefCitation id="16564631028067B1006EEE8326A191A6" author="Senanayake, IC" journalOrPublisher="Studies in Mycology" pageId="35" pageNumber="60" pagination="217 - 296" title="Families of Diaporthales based on morphological and phylogenetic evidence." url="https://doi.org/10.1016/j.simyco.2017.07.003" volume="86" year="2017">Senanayake et al. (2017)</bibRefCitation>
|
||||
listed further genera that belong to
|
||||
<taxonomicName genus="Diaporthaceae" lsidName="Diaporthaceae" pageId="16" pageNumber="41" rank="genus">Diaporthaceae</taxonomicName>
|
||||
<taxonomicName id="C0FDC724D712629371A7803CE696813B" genus="Diaporthaceae" lsidName="Diaporthaceae" pageId="16" pageNumber="41" rank="genus">Diaporthaceae</taxonomicName>
|
||||
. In this study, a new and a known species of
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
<taxonomicName id="C305B56ED019F64EC1BD5A14918E3898" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
from
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="16" pageNumber="41" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="5D6E95202592C03768CF26A7FB395C2C" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
hosts in Thailand is reported.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,141 +1,141 @@
|
|||
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<mods:namePart>Doilom, Mingkwan</mods:namePart>
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<mods:namePart>Yang, Jun-Bo</mods:namePart>
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<treatment ID-GBIF-Taxon="142664183" LSID="urn:lsid:plazi:treatment:F3817CAF8E3CEB4C5C6BFAD14EBA432D" httpUri="http://treatment.plazi.org/id/F3817CAF8E3CEB4C5C6BFAD14EBA432D" lastPageNumber="43" pageId="18" pageNumber="43">
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|
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<paragraph pageId="18" pageNumber="43">
|
||||
<taxonomicName authority="Prihast., L. Cai & K. D. Hyde, 2009" authorityName="Prihast., L. Cai & K. D. Hyde" authorityYear="2009" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Sordariomycetes" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola Prihast., L. Cai & K.D. Hyde, 2009</taxonomicName>
|
||||
<treatment id="F3817CAF8E3CEB4C5C6BFAD14EBA432D" ID-GBIF-Taxon="142664183" LSID="urn:lsid:plazi:treatment:F3817CAF8E3CEB4C5C6BFAD14EBA432D" httpUri="http://treatment.plazi.org/id/F3817CAF8E3CEB4C5C6BFAD14EBA432D" lastPageNumber="43" pageId="18" pageNumber="43" scope_family="Glomerellaceae" scope_order="Diaporthales" scope_phylum="Ascomycota">
|
||||
<subSubSection id="156C83E4C2A617931900C6B5A27933DF" pageId="18" pageNumber="43" type="nomenclature">
|
||||
<paragraph id="36C761DEF2DC3A083BB7CEF63D785FF7" pageId="18" pageNumber="43">
|
||||
<taxonomicName id="E383E85673011A26C09309B07A93A5DA" authority="Prihast., L. Cai & K. D. Hyde, 2009" authorityName="Prihast., L. Cai & K. D. Hyde" authorityYear="2009" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Sordariomycetes" pageId="18" pageNumber="43" rank="species" species="fructicola">Colletotrichum fructicola Prihast., L. Cai & K.D. Hyde, 2009</taxonomicName>
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="18" pageNumber="43" type="description">
|
||||
<paragraph pageId="18" pageNumber="43">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="18" pageNumber="43">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="18" pageNumber="43" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="0F0B083433C4E1A8B27E728D4211F268" pageId="18" pageNumber="43" type="description">
|
||||
<paragraph id="D90F16500F77E53BFC8548D644BF6BFB" pageId="18" pageNumber="43">Culture characteristics.</paragraph>
|
||||
<paragraph id="5997F83084D6D6B35ACCBFA248C9CD3B" pageId="18" pageNumber="43">
|
||||
<taxonomicName id="AEB8A195E434CDFB9FFDE329F6386470" genus="Colonies" lsidName="Colonies" pageId="18" pageNumber="43" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, PE84, 88), superficial, white to olivaceous in the beginning and later become olivaceous to dark-olivaceous, circular, entire edge, smooth, dense and raised on surface media; reverse dark-olivaceous. Sporulating in culture after 1 month.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="18" pageNumber="43" type="genbank numbers">
|
||||
<paragraph pageId="18" pageNumber="43">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="18" pageNumber="43">
|
||||
<subSubSection id="142F67831DEF7F80A3538E14CC667D7C" pageId="18" pageNumber="43" type="genbank numbers">
|
||||
<paragraph id="B0A6A7A2B276709A187C2399A515B411" pageId="18" pageNumber="43">GenBank numbers.</paragraph>
|
||||
<paragraph id="1CC2C68F48F242CC3AB3B9B5213FE251" pageId="18" pageNumber="43">
|
||||
MFLUCC 17-0613 ITS=MG646968,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="287E7259E68E4C9B7297647758271D2C" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
=MG646927, GAPDH=MG646932, CHS-1=MG646937, ACT=MG646939. MFLUCC 17-0555 ITS=MG646969,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="622776BF563CE3663A746086A50E774D" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
=MG646928, GADPH=MG646933, CHS-1=MG646936, ACT=MG646944.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="18" pageNumber="43" type="notes">
|
||||
<paragraph pageId="18" pageNumber="43">Notes.</paragraph>
|
||||
<paragraph pageId="18" pageNumber="43">
|
||||
<subSubSection id="88E40E82F01FA7A650A5E30E1169016F" pageId="18" pageNumber="43" type="notes">
|
||||
<paragraph id="3AF19AE53182EDA576638F6E6380A495" pageId="18" pageNumber="43">Notes.</paragraph>
|
||||
<paragraph id="B0F5321A22DDCE0E9D73D9FA3E5B48E3" pageId="18" pageNumber="43">
|
||||
The
|
||||
<taxonomicName genus="Mycelium" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Mycelium gloeosporioides" pageId="18" pageNumber="43" phylum="Basidiomycota" rank="species" species="gloeosporioides">gloeosporioides</taxonomicName>
|
||||
<taxonomicName id="01E75D7502FAA83DF97A282E3F0DCD4F" genus="Mycelium" lsidName="Mycelium gloeosporioides" pageId="18" pageNumber="43" rank="species" species="gloeosporioides">gloeosporioides</taxonomicName>
|
||||
species complex is mainly plant pathogens (
|
||||
<bibRefCitation author="Weir, BS" journalOrPublisher="Mycologia Memoirs" pageId="37" pageNumber="62" url="https://doi.org/10.3114/sim0011" year="2012">Weir et al. 2012</bibRefCitation>
|
||||
<bibRefCitation id="2BF78FF9FBE3CFDC959EAFBBFA432ACD" author="Weir, BS" journalOrPublisher="Mycologia Memoirs" pageId="37" pageNumber="62" url="https://doi.org/10.3114/sim0011" year="2012">Weir et al. 2012</bibRefCitation>
|
||||
) and some species are endophytes (
|
||||
<bibRefCitation author="Liu, F" journalOrPublisher="Persoonia" pageId="32" pageNumber="57" pagination="63 - 86" title="Unravelling Colletotrichum species associated with Camellia: employing ApMat and GS loci to resolve species in the C. gloeosporioides complex." url="https://doi.org/10.1016/j.funbio.2017.06.003" volume="35" year="2015">Liu et al. 2015</bibRefCitation>
|
||||
<bibRefCitation id="3F4F9B2D052C509D0D9D0C1843B8B5A1" author="Liu, F" journalOrPublisher="Persoonia" pageId="32" pageNumber="57" pagination="63 - 86" title="Unravelling Colletotrichum species associated with Camellia: employing ApMat and GS loci to resolve species in the C. gloeosporioides complex." url="https://doi.org/10.1016/j.funbio.2017.06.003" volume="35" year="2015">Liu et al. 2015</bibRefCitation>
|
||||
).
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
|
||||
<taxonomicName id="6611F6013711768F4BB7F4FA885A5B94" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
|
||||
has a wide host range (
|
||||
<bibRefCitation author="Weir, BS" journalOrPublisher="Mycologia Memoirs" pageId="37" pageNumber="62" url="https://doi.org/10.3114/sim0011" year="2012">Weir et al. 2012</bibRefCitation>
|
||||
<bibRefCitation id="2CAD897D0246D69E597CA0FEDCF1BE26" author="Weir, BS" journalOrPublisher="Mycologia Memoirs" pageId="37" pageNumber="62" url="https://doi.org/10.3114/sim0011" year="2012">Weir et al. 2012</bibRefCitation>
|
||||
) and was originally reported from coffee berries in Thailand (
|
||||
<bibRefCitation author="Prihastuti, H" journalOrPublisher="Fungal Diversity" pageId="34" pageNumber="59" pagination="89 - 109" title="Characterization of Colletotrichum species associated with coffee berries in northern Thailand." volume="39" year="2009">Prihastuti et al. 2009</bibRefCitation>
|
||||
<bibRefCitation id="A327A549768B5A1CBD318082AB59AE8A" author="Prihastuti, H" journalOrPublisher="Fungal Diversity" pageId="34" pageNumber="59" pagination="89 - 109" title="Characterization of Colletotrichum species associated with coffee berries in northern Thailand." volume="39" year="2009">Prihastuti et al. 2009</bibRefCitation>
|
||||
). In this study, the authors followed
|
||||
<bibRefCitation author="Jayawardena, RS" journalOrPublisher="Mycosphere" pageId="30" pageNumber="55" pagination="1192 - 1260" title="Notes on currently accepted species of Colletotrichum." url="https://doi.org/10.5943/mycosphere/si/2c/9" volume="7" year="2016">Jayawardena et al. (2016)</bibRefCitation>
|
||||
<bibRefCitation id="C211DBC4266E242ADB711826A9C15661" author="Jayawardena, RS" journalOrPublisher="Mycosphere" pageId="30" pageNumber="55" pagination="1192 - 1260" title="Notes on currently accepted species of Colletotrichum." url="https://doi.org/10.5943/mycosphere/si/2c/9" volume="7" year="2016">Jayawardena et al. (2016)</bibRefCitation>
|
||||
and identify the collection as
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
|
||||
<taxonomicName id="AA6EF63335D555CAF3509CD3120FD6FC" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
|
||||
which was isolated from a
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="18" pageNumber="43" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="A6B3F3640BFA2727A10E8CB09CFA0479" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="18" pageNumber="43" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
host. Based on phylogenetic analysis, this taxon grouped with
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
|
||||
<taxonomicName id="A0BC872A24B1958FD0C57B6008DFE309" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
|
||||
with 90 % in ML and 1.00 in PP. The ITS,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="9D18EB03297FDD2D406C61785B95DF70" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
, GAPDH, CHS-1 and ACT DNA nucleotide comparison showed that the taxon and other strains of
|
||||
<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
|
||||
<taxonomicName id="C66E6BAF4EBC2E5A0D981EAB7CE878E2" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="18" pageNumber="43" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
|
||||
Prihast., L. Cai & K.D. Hyde have 100% similarity.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,231 +1,231 @@
|
|||
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<mods:name type="personal">
|
||||
<mods:role>
|
||||
<mods:roleTerm>Author</mods:roleTerm>
|
||||
<mods:name id="8A35B7F084E1AE3936534169115FCC1D" type="personal">
|
||||
<mods:role id="2BC1BCA49D085D5DFF23FA6D124143FB">
|
||||
<mods:roleTerm id="76080D60326578D235B0420E16547CE9">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart>Promputtha, Itthayakorn</mods:namePart>
|
||||
<mods:namePart id="734FD9EFD28A0AEA761A1C41E40F83F5">Promputtha, Itthayakorn</mods:namePart>
|
||||
</mods:name>
|
||||
<mods:name type="personal">
|
||||
<mods:role>
|
||||
<mods:roleTerm>Author</mods:roleTerm>
|
||||
<mods:name id="E86F9A98FE1AF450B1647E6D05A40C52" type="personal">
|
||||
<mods:role id="2F91A5EA7764CEE81ABD1079493CEADC">
|
||||
<mods:roleTerm id="490533D830F10590E6DBE0866ABF9EC0">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart>Doilom, Mingkwan</mods:namePart>
|
||||
<mods:namePart id="04803CDEE9F57BD86955711AC77EB06F">Doilom, Mingkwan</mods:namePart>
|
||||
</mods:name>
|
||||
<mods:name type="personal">
|
||||
<mods:role>
|
||||
<mods:roleTerm>Author</mods:roleTerm>
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||||
<mods:name id="72290820B58ABEE7FCFDF1DDDF78F23A" type="personal">
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<mods:role id="8044E7B38110DF13EDA9A3347320F835">
|
||||
<mods:roleTerm id="C75E968A2D45BFF04AFD5D413FC76F4F">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart>Yang, Jun-Bo</mods:namePart>
|
||||
<mods:namePart id="0C46E7ACF4C1E2D3250FF332B82155B1">Yang, Jun-Bo</mods:namePart>
|
||||
</mods:name>
|
||||
<mods:name type="personal">
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||||
<mods:role>
|
||||
<mods:roleTerm>Author</mods:roleTerm>
|
||||
<mods:name id="EC46FAB0AA076E0934FFB3D8998478D7" type="personal">
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<mods:role id="7D52F5AFCE5079575CE398E6E9CA07F8">
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<mods:roleTerm id="692F5915A1B47666BB94CE6EBD137BA3">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart>Tang, Alvin M. C.</mods:namePart>
|
||||
<mods:namePart id="2FC95E101471E2354A461C5A1DB28DB5">Tang, Alvin M. C.</mods:namePart>
|
||||
</mods:name>
|
||||
<mods:name type="personal">
|
||||
<mods:role>
|
||||
<mods:roleTerm>Author</mods:roleTerm>
|
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<mods:name id="CA2E748CF0564AD01AFF640E940A7F09" type="personal">
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<mods:role id="DCEDE1DEA8AA1AC25837D46A173A7283">
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<mods:roleTerm id="05D5B5ACFE048A0E175EAED6A2BF3759">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart>Karunarathna, Samantha C.</mods:namePart>
|
||||
<mods:namePart id="9641C6AF0AF18AAFE8FA781A487E76B7">Karunarathna, Samantha C.</mods:namePart>
|
||||
</mods:name>
|
||||
<mods:typeOfResource>text</mods:typeOfResource>
|
||||
<mods:relatedItem type="host">
|
||||
<mods:titleInfo>
|
||||
<mods:title>MycoKeys</mods:title>
|
||||
<mods:typeOfResource id="387F2D435D6F84E1D29A381859D7DB31">text</mods:typeOfResource>
|
||||
<mods:relatedItem id="93F7BE0178753DB807DCFBBB2DB77286" type="host">
|
||||
<mods:titleInfo id="01235ACB783150B7493224B51CC13CBC">
|
||||
<mods:title id="C3788D079AA43B87483F32C788129594">MycoKeys</mods:title>
|
||||
</mods:titleInfo>
|
||||
<mods:part>
|
||||
<mods:date>2018</mods:date>
|
||||
<mods:detail type="volume">
|
||||
<mods:number>33</mods:number>
|
||||
<mods:part id="0CCEBFE81DC618F1D2D79AC62229E7D0">
|
||||
<mods:date id="42FD9E103B60CEB2CF0AEF8C3CFEE3E3">2018</mods:date>
|
||||
<mods:detail id="9D9E89E60A3C9FDD43DA1984935945EE" type="volume">
|
||||
<mods:number id="373CE462B369CBDEC35C9992DEE6112A">33</mods:number>
|
||||
</mods:detail>
|
||||
<mods:extent unit="page">
|
||||
<mods:start>25</mods:start>
|
||||
<mods:end>67</mods:end>
|
||||
<mods:extent id="1A5EDA3CB99A20478C78DC728F99092C" unit="page">
|
||||
<mods:start id="A82EBBA707FC2A06A39C73D2246A1B8E">25</mods:start>
|
||||
<mods:end id="F3B477191CF500B2F2EBA2D1F8765F00">67</mods:end>
|
||||
</mods:extent>
|
||||
</mods:part>
|
||||
</mods:relatedItem>
|
||||
<mods:location>
|
||||
<mods:url>http://dx.doi.org/10.3897/mycokeys.33.23670</mods:url>
|
||||
<mods:location id="51DFABCCECA77CED3BE00B9DD30246BF">
|
||||
<mods:url id="6BDBECE6063D093B455D74522C06ABEF">http://dx.doi.org/10.3897/mycokeys.33.23670</mods:url>
|
||||
</mods:location>
|
||||
<mods:classification>journal article</mods:classification>
|
||||
<mods:identifier type="DOI">http://dx.doi.org/10.3897/mycokeys.33.23670</mods:identifier>
|
||||
<mods:identifier type="Pensoft-Pub">1314-4049-33-25</mods:identifier>
|
||||
<mods:classification id="965D3A7B1E4A22A63AA0895EE21E5875">journal article</mods:classification>
|
||||
<mods:identifier id="0DFB69E05FC00D18A0A23C0F1220D11F" type="DOI">http://dx.doi.org/10.3897/mycokeys.33.23670</mods:identifier>
|
||||
<mods:identifier id="FDAF3301CC57354DA0C2DC0BDBAF375D" type="Pensoft-Pub">1314-4049-33-25</mods:identifier>
|
||||
</mods:mods>
|
||||
<treatment ID-GBIF-Taxon="142664211" LSID="urn:lsid:plazi:treatment:F63FD24A3884F54BDFE600F0A4F6A5B8" httpUri="http://treatment.plazi.org/id/F63FD24A3884F54BDFE600F0A4F6A5B8" lastPageId="14" lastPageNumber="39" pageId="11" pageNumber="36">
|
||||
<subSubSection pageId="11" pageNumber="36" type="nomenclature">
|
||||
<paragraph pageId="11" pageNumber="36">
|
||||
<taxonomicName LSID=" MB823839" authority="Tibpromma & K. D. Hyde" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina pandanicola" order="Pleosporales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="pandanicola">Massarina pandanicola Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel pageId="11" pageNumber="36">sp. nov.</taxonomicNameLabel>
|
||||
<treatment id="F63FD24A3884F54BDFE600F0A4F6A5B8" ID-GBIF-Taxon="142664211" LSID="urn:lsid:plazi:treatment:F63FD24A3884F54BDFE600F0A4F6A5B8" httpUri="http://treatment.plazi.org/id/F63FD24A3884F54BDFE600F0A4F6A5B8" lastPageId="14" lastPageNumber="39" pageId="11" pageNumber="36" scope_family="Massarinaceae" scope_order="Capnodiales" scope_phylum="Ascomycota">
|
||||
<subSubSection id="C02B90ACE0DD0D266068C60ED3CEC78A" pageId="11" pageNumber="36" type="nomenclature">
|
||||
<paragraph id="50CD75B279F8FCE9DD77DBC2248A507D" pageId="11" pageNumber="36">
|
||||
<taxonomicName id="B0EE0CACAC507244816C8FD8ED1C3B05" ID-CoL="6QVDK" LSID=" MB823839" authority="Tibpromma & K. D. Hyde" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina pandanicola" order="Pleosporales" pageId="11" pageNumber="36" phylum="Ascomycota" rank="species" species="pandanicola">Massarina pandanicola Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel id="B88938975DED344A8FD3AEF35E10ECBB" pageId="11" pageNumber="36">sp. nov.</taxonomicNameLabel>
|
||||
Figure 10
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="12" pageNumber="37" type="etymology">
|
||||
<paragraph pageId="12" pageNumber="37">
|
||||
<pageBreakToken pageId="12" pageNumber="37" start="start">Etymology</pageBreakToken>
|
||||
<subSubSection id="6D6A69A9A001CF2839DDFCE92CCDF5E0" pageId="12" pageNumber="37" type="etymology">
|
||||
<paragraph id="3C1A6006B4D8D29E685DAA5EDC9F7803" pageId="12" pageNumber="37">
|
||||
<pageBreakToken id="8754442FBDCBEDB27A0D65776EC1BF9F" pageId="12" pageNumber="37" start="start">Etymology</pageBreakToken>
|
||||
.
|
||||
</paragraph>
|
||||
<paragraph pageId="12" pageNumber="37">
|
||||
<paragraph id="345C3418CBFEA48CC4B8F1D20FDFEAD7" pageId="12" pageNumber="37">
|
||||
name referring to the host genus of the plant on which the fungus was first discovered (
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="12" pageNumber="37" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="E5BB71DEFEA755FE22DE7D2F8DE83A94" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="12" pageNumber="37" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="13" pageNumber="38" type="holotype">
|
||||
<paragraph pageId="13" pageNumber="38">
|
||||
<pageBreakToken pageId="13" pageNumber="38" start="start">Holotype</pageBreakToken>
|
||||
<subSubSection id="CEAF99CAE35A6292CEED0597385211AD" pageId="13" pageNumber="38" type="holotype">
|
||||
<paragraph id="BB1450069110F6C09C0E5CB8EC9EDA4D" pageId="13" pageNumber="38">
|
||||
<pageBreakToken id="0F691F19586142D6A069A750981285E9" pageId="13" pageNumber="38" start="start">Holotype</pageBreakToken>
|
||||
.
|
||||
</paragraph>
|
||||
<paragraph pageId="13" pageNumber="38">MFLU 18-0004</paragraph>
|
||||
<paragraph id="E5DED371C93A4CBD4A99BC820DDC52A8" pageId="13" pageNumber="38">MFLU 18-0004</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="13" pageNumber="38" type="description">
|
||||
<paragraph pageId="13" pageNumber="38">Description.</paragraph>
|
||||
<paragraph pageId="13" pageNumber="38">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="13" pageNumber="38" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="6BCC9E106309FEB965CF4667C99B7D42" pageId="13" pageNumber="38" type="description">
|
||||
<paragraph id="3CF614B3D0512918CD82299C5FFB67D3" pageId="13" pageNumber="38">Description.</paragraph>
|
||||
<paragraph id="52DEB61C638A975EA3A74399871B4E98" pageId="13" pageNumber="38">
|
||||
<taxonomicName id="B530679FD25BFDDDD68B94A953D7EFA9" genus="Colonies" lsidName="Colonies" pageId="13" pageNumber="38" rank="genus">Colonies</taxonomicName>
|
||||
on PDA attaining 9 cm diam. in 4 weeks at room temperature, slow growing, white to yellow-white.
|
||||
<taxonomicName genus="Mycelium" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Mycelium" pageId="13" pageNumber="38" phylum="Basidiomycota" rank="genus">Mycelium</taxonomicName>
|
||||
<taxonomicName id="D6983AA248D2F5AA0172614E146CDD2A" genus="Mycelium" lsidName="Mycelium" pageId="13" pageNumber="38" rank="genus">Mycelium</taxonomicName>
|
||||
superficial and immersed composed of septate, branched, 2.5-7
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="42FEAA923853DA8AD6A270A5BD8F4DE7" originalValue="µm">µm</normalizedToken>
|
||||
wide, sub-hyaline, with smooth and thick-walled hyphae. Sexual morph Undetermined. Asexual morph
|
||||
<taxonomicName genus="Conidiophores" lsidName="Conidiophores" pageId="13" pageNumber="38" rank="genus">Conidiophores</taxonomicName>
|
||||
<taxonomicName id="0D6C1147213CCCDB8A3267FA26B254E5" genus="Conidiophores" lsidName="Conidiophores" pageId="13" pageNumber="38" rank="genus">Conidiophores</taxonomicName>
|
||||
12-25
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="A5A0668FE8289338CF7E570F70C891A7" originalValue="µm">µm</normalizedToken>
|
||||
high, 8-14
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="79A444E278D96BDEDDF86E6A4E7D6561" originalValue="µm">µm</normalizedToken>
|
||||
diam. (x̄ = 15.12
|
||||
<normalizedToken originalValue="×">x</normalizedToken>
|
||||
<normalizedToken id="90CF4CA258D417234D6C1CDD03C15BD2" originalValue="×">x</normalizedToken>
|
||||
10.45
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="F17CC6B4BF13310A9CCEE1A98952B3D0" originalValue="µm">µm</normalizedToken>
|
||||
, n = 10), enteroblastic, phialidic, cylindrical or sub-cylindrical, sub-hyaline.
|
||||
<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="13" pageNumber="38" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
|
||||
<taxonomicName id="00198BC538C587B0A835A4B3FE733E60" genus="Conidia" lsidName="Conidia" pageId="13" pageNumber="38" rank="genus">Conidia</taxonomicName>
|
||||
3-5
|
||||
<normalizedToken originalValue="×">x</normalizedToken>
|
||||
<normalizedToken id="1B020DDED73596844E0D1EF8AF6E7F9B" originalValue="×">x</normalizedToken>
|
||||
1-3
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="1CF6D7F4806B98FB8DCF6A098ED21043" originalValue="µm">µm</normalizedToken>
|
||||
(x̄ = 4.34
|
||||
<normalizedToken originalValue="×">x</normalizedToken>
|
||||
<normalizedToken id="6AE42640872859BD159C0AEAC1EDA5F4" originalValue="×">x</normalizedToken>
|
||||
1.75
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="B973C64D0CC9FCAAE9F05B5A4EB7DC07" originalValue="µm">µm</normalizedToken>
|
||||
, n = 30), cylindrical, hyaline, smooth and thin-walled, aseptate, rounded ends, guttulate, without sheet or appendages.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="14" pageNumber="39" type="description">
|
||||
<paragraph pageId="14" pageNumber="39">
|
||||
<pageBreakToken pageId="14" pageNumber="39" start="start">Culture</pageBreakToken>
|
||||
<subSubSection id="6A32FB89ACD8857A0E9612DE082AD285" pageId="14" pageNumber="39" type="description">
|
||||
<paragraph id="5D616A38948CAB6E6FA9986FD34951D0" pageId="14" pageNumber="39">
|
||||
<pageBreakToken id="FC6904BE80BD70C611543609A7D9A70A" pageId="14" pageNumber="39" start="start">Culture</pageBreakToken>
|
||||
characteristics.
|
||||
</paragraph>
|
||||
<paragraph pageId="14" pageNumber="39">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="14" pageNumber="39" rank="genus">Colonies</taxonomicName>
|
||||
<paragraph id="CF5F1A5054FAAB5E66896F57212A7AEC" pageId="14" pageNumber="39">
|
||||
<taxonomicName id="C18ECCD7182C8C82EF93CFB6ACE5B6DD" genus="Colonies" lsidName="Colonies" pageId="14" pageNumber="39" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, PE52), superficial, white to yellow-white, irregular, undulate with smooth and raised on surface media; reverse yellow-white. Generative hyphae simple-septate, branched, sub-hyaline, with guttulate cells, thin-walled. Sporulating in culture within 3 months (Figure 10).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="14" pageNumber="39" type="materials_examined">
|
||||
<paragraph pageId="14" pageNumber="39">Material examined.</paragraph>
|
||||
<paragraph pageId="14" pageNumber="39">
|
||||
<subSubSection id="8884361B06EDDE2CC2D04224BAF1E78D" pageId="14" pageNumber="39" type="materials_examined">
|
||||
<paragraph id="8D37FCAC8BF39E2F636221321AA38233" pageId="14" pageNumber="39">Material examined.</paragraph>
|
||||
<paragraph id="D33CA830B572B4FA931E201B27B38BB0" pageId="14" pageNumber="39">
|
||||
THAILAND, Chumphon, Pathio District, on healthy leaves of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="14" pageNumber="39" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="7FF3C99B17C53E860DD106E66C62FB69" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="14" pageNumber="39" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. (
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="14" pageNumber="39" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="E7AAC709D97D62166C91E711BB1210D2" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="14" pageNumber="39" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
), 1 December 2016, S. Tibpromma PE52 (MFLU 18-0004, holotype); HKAS100854, paratype, ex-type living cultures, MFLUCC 17-0596 = KUMCC 17-0293.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="14" pageNumber="39" type="genbank numbers">
|
||||
<paragraph pageId="14" pageNumber="39">Genbank numbers.</paragraph>
|
||||
<paragraph pageId="14" pageNumber="39">ITS=MG646958, LSU=MG646947, SSU=MG646979, TEF1=MG646986.</paragraph>
|
||||
<subSubSection id="AB4853B01A201108AE7999326B0E2B82" pageId="14" pageNumber="39" type="genbank numbers">
|
||||
<paragraph id="81CAEF7496700498F2A98A746DAE291D" pageId="14" pageNumber="39">Genbank numbers.</paragraph>
|
||||
<paragraph id="D894BFE6FCD8AAB2F31EB6EFACA14A68" pageId="14" pageNumber="39">ITS=MG646958, LSU=MG646947, SSU=MG646979, TEF1=MG646986.</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="14" pageNumber="39" type="notes">
|
||||
<paragraph pageId="14" pageNumber="39">Notes.</paragraph>
|
||||
<paragraph pageId="14" pageNumber="39">
|
||||
<subSubSection id="B0573F4F0E939D35878D1D818513865C" pageId="14" pageNumber="39" type="notes">
|
||||
<paragraph id="59A880ADD20BFF3F759266655863E73F" pageId="14" pageNumber="39">Notes.</paragraph>
|
||||
<paragraph id="746E677C8591818E1E8FC88569E85A28" pageId="14" pageNumber="39">
|
||||
The genus
|
||||
<taxonomicName class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
<taxonomicName id="EF6DAFBCFF7686599C19116E0091986F" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
has been known as a phylogenetically diverse group in the order
|
||||
<taxonomicName genus="Pleosporales" lsidName="Pleosporales" pageId="14" pageNumber="39" rank="genus">Pleosporales</taxonomicName>
|
||||
<taxonomicName id="F1135886FD4932D26CE789EDB769EFFF" genus="Pleosporales" lsidName="Pleosporales" pageId="14" pageNumber="39" rank="genus">Pleosporales</taxonomicName>
|
||||
based on molecular data (
|
||||
<bibRefCitation author="Liew, ECY" journalOrPublisher="Mycologia" pageId="31" pageNumber="56" pagination="803 - 813" title="An evaluation of the monophyly of Massarina based on ribosomal DNA sequences." url="https://doi.org/10.1080/15572536.2003.11833174" volume="94" year="2002">Liew et al. 2002</bibRefCitation>
|
||||
<bibRefCitation id="508C1247E83C6352E7D61B180A80177A" author="Liew, ECY" journalOrPublisher="Mycologia" pageId="31" pageNumber="56" pagination="803 - 813" title="An evaluation of the monophyly of Massarina based on ribosomal DNA sequences." url="https://doi.org/10.1080/15572536.2003.11833174" volume="94" year="2002">Liew et al. 2002</bibRefCitation>
|
||||
) and most members in
|
||||
<taxonomicName class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
<taxonomicName id="445F839736BBDB3898A107A23D7D8C6C" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
except for the type species (
|
||||
<taxonomicName lsidName="M. eburnea" pageId="14" pageNumber="39" rank="species" species="eburnea">M. eburnea</taxonomicName>
|
||||
<taxonomicName id="A96F8F86A7F035BA1F388433842AA255" lsidName="M. eburnea" pageId="14" pageNumber="39" rank="species" species="eburnea">M. eburnea</taxonomicName>
|
||||
) are morphologically variable. The taxon,
|
||||
<taxonomicName class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina pandanicola" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="pandanicola">Massarina pandanicola</taxonomicName>
|
||||
<taxonomicName id="10BACD354360FAC65D22C598D9C663ED" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina pandanicola" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="pandanicola">Massarina pandanicola</taxonomicName>
|
||||
collected from
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="14" pageNumber="39" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="3D0350AD707D4045E4699E8820BC6E79" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="14" pageNumber="39" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. in Thailand is introduced here as a new species with both morphology and phylogeny support. The morphology of the taxon showed similar conidia with
|
||||
<taxonomicName class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina eburnean" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="eburnean">Massarina eburnean</taxonomicName>
|
||||
<taxonomicName id="7E5905DDC561F318A0FF5BE1B14ABF62" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina eburnean" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="eburnean">Massarina eburnean</taxonomicName>
|
||||
(
|
||||
<bibRefCitation author="Tanaka, K" journalOrPublisher="Studies in mycology" pageId="35" pageNumber="60" pagination="75 - 136" title="Revision of the Massarineae (Pleosporales, Dothideomycetes)." url="http://dx.doi.org/10.1016/j.simyco.2015.10.002" volume="82" year="2015">Tanaka et al. 2015</bibRefCitation>
|
||||
<bibRefCitation id="A680354B2256A81419DF98B2F4596364" author="Tanaka, K" journalOrPublisher="Studies in mycology" pageId="35" pageNumber="60" pagination="75 - 136" title="Revision of the Massarineae (Pleosporales, Dothideomycetes)." url="http://dx.doi.org/10.1016/j.simyco.2015.10.002" volume="82" year="2015">Tanaka et al. 2015</bibRefCitation>
|
||||
), but based on phylogenetic analysis of combined ITS, LSU, SSU and TEF1 gene sequence data, the new taxon
|
||||
<taxonomicName lsidName="M. pandanicola" pageId="14" pageNumber="39" rank="species" species="pandanicola">M. pandanicola</taxonomicName>
|
||||
<taxonomicName id="3AE3035630C579006CD3EF7AC66B804E" lsidName="M. pandanicola" pageId="14" pageNumber="39" rank="species" species="pandanicola">M. pandanicola</taxonomicName>
|
||||
is well-separated from other species in
|
||||
<taxonomicName class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
<taxonomicName id="BFF87DF95DBB6110A44225900A1A2E1E" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
(Figure 9) with high bootstrap support (79 % in ML). This is the first record of
|
||||
<taxonomicName class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
<taxonomicName id="5DFD6300E7F52DD43DD44C6DE2569940" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Massarina</taxonomicName>
|
||||
from
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="14" pageNumber="39" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="F27F8E485D2F1F210828942FC4EC6232" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="14" pageNumber="39" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp.
|
||||
</paragraph>
|
||||
<caption pageId="14" pageNumber="39">
|
||||
<paragraph pageId="14" pageNumber="39">
|
||||
<caption id="A9B20F7A7095B15229AAB87479118A0F" pageId="14" pageNumber="39">
|
||||
<paragraph id="990360986782B9824B02940193BC1A6F" pageId="14" pageNumber="39">
|
||||
Figure 9. Phylogram generated from maximum likelihood analysis based on ITS, TEF1, SSU, LSU and RPB2 sequenced data. Maximum likelihood bootstrap values are given above/below the nodes. The newly generated sequences in red bold. The tree is rooted with
|
||||
<taxonomicName class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria alternata" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="alternata">Alternaria alternata</taxonomicName>
|
||||
<taxonomicName id="8BBF33875C2DD43437DF8DEF5BE6435C" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria alternata" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="alternata">Alternaria alternata</taxonomicName>
|
||||
and
|
||||
<taxonomicName class="Dothideomycetes" family="Pleosporaceae" genus="Pleospora" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pleospora herbarum" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="herbarum">Pleospora herbarum</taxonomicName>
|
||||
<taxonomicName id="0B077BB09E1180ADC01BFFB12A286927" class="Dothideomycetes" family="Pleosporaceae" genus="Pleospora" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pleospora herbarum" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="herbarum">Pleospora herbarum</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
<caption pageId="14" pageNumber="39">
|
||||
<paragraph pageId="14" pageNumber="39">
|
||||
<caption id="66D5B55E088A19DB65BB90EDF801394C" pageId="14" pageNumber="39">
|
||||
<paragraph id="95E23F79264F5D380098ABE7E7F28F0C" pageId="14" pageNumber="39">
|
||||
Figure 10.
|
||||
<taxonomicName class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina pandanicola" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="pandanicola">Massarina pandanicola</taxonomicName>
|
||||
<taxonomicName id="4C8F7266070D2CF28B745FFA97962195" class="Dothideomycetes" family="Massarinaceae" genus="Massarina" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Massarina pandanicola" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="species" species="pandanicola">Massarina pandanicola</taxonomicName>
|
||||
(MFLU 18-0004, holotype). a Colony on MEA media b
|
||||
<taxonomicName genus="Mycelium" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Mycelium" pageId="14" pageNumber="39" phylum="Basidiomycota" rank="genus">Mycelium</taxonomicName>
|
||||
<taxonomicName id="22DB53F820894959294061CBC7C2A00F" genus="Mycelium" lsidName="Mycelium" pageId="14" pageNumber="39" rank="genus">Mycelium</taxonomicName>
|
||||
masses
|
||||
<normalizedToken originalValue="c–g">c-g</normalizedToken>
|
||||
<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
|
||||
<normalizedToken id="8A065D6E387CAA22BAE5728E6501D716" originalValue="c–g">c-g</normalizedToken>
|
||||
<taxonomicName id="ABD5F0BC9233420BB573E42AB75295F4" genus="Conidia" lsidName="Conidia" pageId="14" pageNumber="39" rank="genus">Conidia</taxonomicName>
|
||||
and conidiogenous cells h
|
||||
<taxonomicName class="Arthoniomycetes" family="Arthoniaceae" genus="Conidia" higherTaxonomySource="GBIF" kingdom="Fungi" lsidName="Conidia" order="Arthoniales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="genus">Conidia</taxonomicName>
|
||||
<taxonomicName id="FA662F42C9CD9704F66F3338BFE8850F" genus="Conidia" lsidName="Conidia" pageId="14" pageNumber="39" rank="genus">Conidia</taxonomicName>
|
||||
. Scale bars: 20
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="956E730D66646909DECCCC853DE2AED7" originalValue="μm">μm</normalizedToken>
|
||||
(b), 2
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="BDE6C584A5ED013AB49EDE65670ECDB0" originalValue="μm">μm</normalizedToken>
|
||||
(
|
||||
<normalizedToken originalValue="c–g">c-g</normalizedToken>
|
||||
<normalizedToken id="C52DD331A96BA170B8F7B183D6058E33" originalValue="c–g">c-g</normalizedToken>
|
||||
), 5
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="F3AF0CBE24130DA01AAD9A27600E7B98" originalValue="μm">μm</normalizedToken>
|
||||
(h).
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
Loading…
Reference in a new issue