165 lines
15 KiB
XML
165 lines
15 KiB
XML
<document id="A31B1C7F59DA1E0AC05384B0B5D0BF67" ID-DOI="10.12651/JSR.2020.9.2.085" ID-ISSN="2713-8615" ID-Zenodo-Dep="13140525" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1722403497596" checkinUser="felipe" docAuthor="Han, Joo Hyun, Maeng, Soohyun, Park, Yuna, Lee, Sang Eun, Lee, Byoung-Hee & Kim, Ki-eun Lee and Myung Kyum" docDate="2020" docId="5E1987B87717551E2858A1F62661FB33" docLanguage="en" docName="JSpeciesRes.9.2.85-104.pdf" docOrigin="Journal of Species Research 9 (2)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Rhizobium alamii BT" docType="treatment" docVersion="2" lastPageNumber="102" masterDocId="A220FFC07707550F2B1FA51B2773FFF7" masterDocTitle="Identification of 12 radiation-resistant bacterial species in the phylum Proteobacteria new to Korea" masterLastPageNumber="104" masterPageNumber="85" pageNumber="101" updateTime="1722403955945" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:mods id="DD1BF0380863F5F39024A591612F76FB" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="ED1B891AA5E4E42B9CC37EA7D25E4C89">
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<mods:title id="216D84AE1FA51F802C237FE9FAD803CD">Identification of 12 radiation-resistant bacterial species in the phylum Proteobacteria new to Korea</mods:title>
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</mods:titleInfo>
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<mods:name id="66B2994C49FAE250F19AEEF52898EA30" type="personal">
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<mods:roleTerm id="08D345ED8E739CDA1CE0C4C1A92A2971">Author</mods:roleTerm>
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<mods:namePart id="5176B7560D0D4D38D19A4B4618B4B75E">Han, Joo Hyun</mods:namePart>
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<mods:affiliation id="AF3C2262E8BE9FADE12A28C57D85C6B8">Department of Bio & Environmental Technology, College of Natural Science, Seoul Women’s University, Seoul 01797, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="698CD017FF6B0F358079862A1949CFA3" type="personal">
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<mods:roleTerm id="121099D204398B55C3AB173C82D49DD1">Author</mods:roleTerm>
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<mods:namePart id="198E9B8A4F7D3E3040859532B0A73B21">Maeng, Soohyun</mods:namePart>
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<mods:affiliation id="54082F66E3580F26EC9E53AF5251E36C">Department of Bio & Environmental Technology, College of Natural Science, Seoul Women’s University, Seoul 01797, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="EBE5B358CA90D4470BDAEA86A252C705" type="personal">
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<mods:roleTerm id="97D435C873FEFEC6076053D0FF58F321">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="E81159D94B389D4E2EE32C946FC85649">Park, Yuna</mods:namePart>
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<mods:affiliation id="EB69626EB8D4CC20D6BCE2F9E88F7BCB">Department of Bio & Environmental Technology, College of Natural Science, Seoul Women’s University, Seoul 01797, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="7334B0942207D56D24233241D85A1448" type="personal">
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<mods:role id="88E20940ED19C03A6E124F3A14F7BAA8">
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<mods:roleTerm id="42F752812F4100BD637A44F269CCE2C0">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="EA4F4AC3618F18DB9DA9504366A0B22F">Lee, Sang Eun</mods:namePart>
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<mods:affiliation id="E483A3833B0B89514ED990350CFC7194">Department of Bio & Environmental Technology, College of Natural Science, Seoul Women’s University, Seoul 01797, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="E086EC21B05C492B090C589DC0AE2D71" type="personal">
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<mods:roleTerm id="E64F2435C193994E72B6E43EAF8CB13F">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="E91277EB825ADBE20E2B32211861CE05">Lee, Byoung-Hee</mods:namePart>
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<mods:affiliation id="E0DA069148A717078543D047B4333BA0">Environmental Research Complex, National Institute of Biological Resources, Incheon 22689, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="E7C00B5A6192E664D098C0BCB5254C6F" type="personal">
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<mods:roleTerm id="433DB31CC5A9D7F0E5A9E102DFEFA1A3">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="E496A39405D5320385A85B29CB8A035A">Kim, Ki-eun Lee and Myung Kyum</mods:namePart>
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<mods:typeOfResource id="371E34D8C8E0FB2A88D144F6BFEAE70D">text</mods:typeOfResource>
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<mods:titleInfo id="55E00B004BCADE567F9EAC2DD8171E75">
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<mods:title id="BA61BEFBA5598619219A25665DC67F61">Journal of Species Research</mods:title>
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</mods:titleInfo>
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<mods:part id="0E70E479FB2561C0A71FB0D9BF21F0CC">
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<mods:date id="E014213B69C2DBC9270A3408A3CE9146">2020</mods:date>
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<mods:detail id="E071A5C0AC0766B4D83E3995AFD102D8" type="volume">
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<mods:number id="1126D047F3E140FE845431DC16CC8AAE">9</mods:number>
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</mods:detail>
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<mods:detail id="784D30776F7E6C03EC2F24D6632AFCA6" type="issue">
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<mods:number id="04B04AD2BBAA82138F2CBD1C9E5368AA">2</mods:number>
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<mods:start id="7563529AE7FAB5202D6136B0DA17B908">85</mods:start>
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<mods:end id="91DB9D2B5F76590AA540F4CC550D90D7">104</mods:end>
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</mods:extent>
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</mods:part>
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<mods:classification id="DE6AA60239052D617CAF3DD1268353BC">journal article</mods:classification>
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<mods:identifier id="298036BDE5B3951C5A0700D0C29B9A9D" type="DOI">10.12651/JSR.2020.9.2.085</mods:identifier>
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<mods:identifier id="5F7C899AB5B1419D521186D32E7484A1" type="ISSN">2713-8615</mods:identifier>
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<mods:identifier id="5161D53BECE8826309D978D49886ADAF" type="Zenodo-Dep">13140525</mods:identifier>
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<treatment id="5E1987B87717551E2858A1F62661FB33" ID-DOI="http://doi.org/10.5281/zenodo.13140555" ID-Zenodo-Dep="13140555" LSID="urn:lsid:plazi:treatment:5E1987B87717551E2858A1F62661FB33" httpUri="http://treatment.plazi.org/id/5E1987B87717551E2858A1F62661FB33" lastPageId="17" lastPageNumber="102" pageId="16" pageNumber="101">
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<subSubSection id="9EAA65257717551E2858A1F62635FB93" lastPageId="17" lastPageNumber="102" pageId="16" pageNumber="101" type="nomenclature">
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<paragraph id="D60F36AE7717551F2858A1F62276FAF2" blockId="16.[839,1285,1261,1285]" box="[839,1285,1261,1285]" pageId="16" pageNumber="101">
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<heading id="8D4781C27717551F2858A1F62276FAF2" box="[839,1285,1261,1285]" fontSize="10" level="2" pageId="16" pageNumber="101" reason="5">
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<emphasis id="E4C4EABC7717551F2858A1F62276FAF2" bold="true" box="[839,1285,1261,1285]" pageId="16" pageNumber="101">
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Description of
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<taxonomicName id="11B04D2D7717551F28F1A1F623AFFAF2" ID-CoL="4SBYM" authority="BT" authorityName="BT" box="[1006,1244,1261,1285]" class="Alphaproteobacteria" family="Rhizobiaceae" genus="Rhizobium" kingdom="Bacteria" order="Rhizobiales" pageId="16" pageNumber="101" phylum="Proteobacteria" rank="species" species="alamii">
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<emphasis id="E4C4EABC7717551F28F1A1F623C0FAF2" bold="true" box="[1006,1203,1261,1285]" italics="true" pageId="16" pageNumber="101">Rhizobium alamii</emphasis>
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BT
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</taxonomicName>
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338
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</emphasis>
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</heading>
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</paragraph>
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<paragraph id="D60F36AE7717551E2841A0052635FB93" blockId="16.[839,1444,1310,1980]" lastBlockId="17.[144,749,261,1221]" lastPageId="17" lastPageNumber="102" pageId="16" pageNumber="101">
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Cells are Gram-stain-negative, non-flagellated, and rod-shaped. Colonies are white-colored after 3 days of incubation on R2A at 25°C. In the BIOLOG GEN III positive for D- maltose, D- trehalose, D- cellobiolose, gentiobiose, sucrose, D- turanose, pH 6,
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<emphasis id="E4C4EABC7717551F2F85A0BB23D9FA40" box="[1178,1194,1440,1463]" italics="true" pageId="16" pageNumber="101">α</emphasis>
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-D- lactose, D- melibiose,
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<emphasis id="E4C4EABC7717551F2858A0DB242AFA20" box="[839,857,1472,1495]" italics="true" pageId="16" pageNumber="101">N</emphasis>
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-acetyl-D- glucosamine,
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<emphasis id="E4C4EABC7717551F2F7DA0DB2307FA20" box="[1122,1140,1472,1495]" italics="true" pageId="16" pageNumber="101">N</emphasis>
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-acetyl-
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<emphasis id="E4C4EABC7717551F2FD5A0DB23AAFA2F" box="[1226,1241,1472,1496]" italics="true" pageId="16" pageNumber="101">β</emphasis>
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-mannosamin, 1% NaCl,
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<emphasis id="E4C4EABC7717551F2890A0FA24ECFA0F" box="[911,927,1505,1528]" italics="true" pageId="16" pageNumber="101">α</emphasis>
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-
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<subScript id="4A3434EB7717551F28B6A0FD24CEFA0F" attach="none" box="[937,957,1504,1528]" fontSize="7" pageId="16" pageNumber="101">D-</subScript>
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glucose,
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<subScript id="4A3434EB7717551F2F3EA0FD2346FA00" attach="right" box="[1057,1077,1504,1527]" fontSize="7" pageId="16" pageNumber="101">D-</subScript>
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mannose,
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<subScript id="4A3434EB7717551F2FB9A0FD23C8FA0F" attach="right" box="[1190,1211,1504,1528]" fontSize="7" pageId="16" pageNumber="101">D-</subScript>
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fructose,
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<subScript id="4A3434EB7717551F2E3CA0FD2244FA0F" attach="right" box="[1315,1335,1504,1528]" fontSize="7" pageId="16" pageNumber="101">D-</subScript>
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galactose, L- fucose, L- rhamnose, 1% sodium lactate, D- mannitol, D- arabitol, myo-inositol, glycerol, glycerol, rifamycin SV, L- glutamic acid, lincomycin, quinic acid, tetrazolium violet, tetrazolium blue, methyl pyruvate, L- malic acid, nalidixic acid, potassium tellurite and acetic acid; weak positive for dextrin, D- raffinose,
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<emphasis id="E4C4EABC7717551F2FADA3B923B2F94D" box="[1202,1217,1698,1722]" italics="true" pageId="16" pageNumber="101">β</emphasis>
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-methyl-D- glucoside,
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<subScript id="4A3434EB7717551F2858A3D3242EF92D" attach="none" box="[839,861,1730,1754]" fontSize="7" pageId="16" pageNumber="101">D-</subScript>
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salicin,
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<emphasis id="E4C4EABC7717551F28A6A3D924B8F92E" box="[953,971,1730,1753]" italics="true" pageId="16" pageNumber="101">N</emphasis>
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-
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<subScript id="4A3434EB7717551F28CCA3D92345F92D" attach="left" box="[979,1078,1730,1754]" fontSize="7" pageId="16" pageNumber="101">acetyl-D-</subScript>
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galactosamin,
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<emphasis id="E4C4EABC7717551F2FC2A3D9239CF92E" box="[1245,1263,1730,1753]" italics="true" pageId="16" pageNumber="101">N</emphasis>
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-acetyl
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<emphasis id="E4C4EABC7717551F2E5AA3D92224F92E" box="[1349,1367,1730,1753]" italics="true" pageId="16" pageNumber="101">N</emphasis>
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-acetyl neuraminic acid, D- fucose, D- sorbitol, glycyl-L- proline, L- alanine, L- aspartic acid, L- histidine, L- serine, pectin, D- glucuronic acid, D- malic acid, bromo-succinic acid, acetoacetic acid, formic acid and aztreonam; but negative for stachyose, pH 5, 4% NaCl, 8% NaCl, 3-methyl-glucose, inosine, fusidic acid, D- serine, D- glucose-6-PO
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<subScript id="4A3434EB7717551F2E8BA29022EEF86B" attach="left" box="[1428,1437,1931,1948]" fontSize="7" pageId="16" pageNumber="101">4</subScript>
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, D- fructose-6-PO
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<subScript id="4A3434EB7717551F28ECA2B0248FF84B" attach="left" box="[1011,1020,1963,1980]" fontSize="7" pageId="16" pageNumber="101">4</subScript>
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, D- aspartic acid, D- serine, minocycline, gelatin, L- arginine, L- pyroglutamic acid, guanidine HCl, niaproof 4, D- galacturonic acid, L- galactonic acid lactone, D- gluconic acid, glucuronamide, mucic acid, D- saccharic acid, vancomycin,
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<emphasis id="E4C4EABC7716551E2A7FA47D261EFE8A" box="[352,365,358,381]" italics="true" pageId="17" pageNumber="102">p</emphasis>
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-hydroxy-pheylacetic acid,
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<subScript id="4A3434EB7716551E2984A47725C3FE89" attach="right" box="[667,688,358,382]" fontSize="7" pageId="17" pageNumber="102">D-</subScript>
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lactic acid methyl ester, L- lactic acid, citric acid,
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<emphasis id="E4C4EABC7716551E2950A49C252CFE69" box="[591,607,391,414]" italics="true" pageId="17" pageNumber="102">α</emphasis>
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-keto-glutaric acid, lithium chloride, tween 40,
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<emphasis id="E4C4EABC7716551E2AE5A4BC257AFE49" box="[506,521,423,446]" italics="true" pageId="17" pageNumber="102">γ</emphasis>
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-amino-butryric acid,
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<emphasis id="E4C4EABC7716551E2B8FA4DC27D3FE29" box="[144,160,455,478]" italics="true" pageId="17" pageNumber="102">α</emphasis>
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-hydroxy-butyric acid,
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<emphasis id="E4C4EABC7716551E2AB5A4DC26CAFE28" box="[426,441,455,479]" italics="true" pageId="17" pageNumber="102">β</emphasis>
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-hydroxy-D, L- butyric acid,
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<emphasis id="E4C4EABC7716551E2B8FA4F327D3FE08" box="[144,160,488,511]" italics="true" pageId="17" pageNumber="102">α</emphasis>
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-keto butyric acid, propionic acid, sodium butyrate and sodium bromate. In API 20NE test, positive for esculin hydrolysis; weak positive for
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<emphasis id="E4C4EABC7716551E2ACDA7332692FDB7" box="[466,481,552,576]" italics="true" pageId="17" pageNumber="102">β</emphasis>
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-galactosidase; but negative for reduction of nitrates (NO
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<subScript id="4A3434EB7716551E2AFAA754269EFD97" attach="left" box="[485,493,591,608]" fontSize="7" pageId="17" pageNumber="102">3</subScript>
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) to nitrogen (N
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<subScript id="4A3434EB7716551E2992A75425E6FD97" attach="left" box="[653,661,591,608]" fontSize="7" pageId="17" pageNumber="102">2</subScript>
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), indole production on tryptophan, glucose fermentation, arginine dihydrolase, urease, gelatin hydrolysis. D- Glucose L- arabinose, D- mannose, D- mannitol, D- maltose and malic acid,
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<emphasis id="E4C4EABC7716551E2B8FA7D227D1FD17" box="[144,162,713,736]" italics="true" pageId="17" pageNumber="102">N</emphasis>
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-
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<subScript id="4A3434EB7716551E2BB7A7D22675FD16" attach="left" box="[168,262,713,737]" fontSize="7" pageId="17" pageNumber="102">acetyl-D-</subScript>
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glucosamine (weak) were utilized; but potassium gluconate, capric acid, adipic acid, trisodium citrate and phenylacetic acid were not utilized. In API 32 GN test, glycogen, salicin, D- fucose, D- sorbitol, 4-hydroxybenzoic acid,
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<subScript id="4A3434EB7716551E2A3FA64B2641FC95" attach="right" box="[288,306,842,866]" fontSize="7" pageId="17" pageNumber="102">L-</subScript>
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rhamnose,
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<emphasis id="E4C4EABC7716551E2AB9A65126CBFC96" box="[422,440,842,865]" italics="true" pageId="17" pageNumber="102">N</emphasis>
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-acetyl-glucosamine, inositol, D- saccharose (sucrose), D- maltose, L- serine, D- mannitol, salicin and D- sorbitol were utilized whereas, D- ribose, itaconic acid, suberic acid, sodium malonate, sodium acetate, lactic acid,
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<subScript id="4A3434EB7716551E2A4EA6CA2617FC14" attach="right" box="[337,356,971,995]" fontSize="7" pageId="17" pageNumber="102">L-</subScript>
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alanine, potassium 5-ketogluconate, 3-hydroxybenzoic acid, L- serine, propionic acid, capric acid, valeric acid, trisodium citrate, L- histidine, potassium 2-ketogluconate, 3-hydroxybutyric acid and L- proline were not utilized.
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</paragraph>
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</subSubSection>
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<subSubSection id="9EAA65257716551E2BB9A1772661FB33" pageId="17" pageNumber="102" type="description">
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<paragraph id="D60F36AE7716551E2BB9A1772661FB33" blockId="17.[144,749,261,1221]" pageId="17" pageNumber="102">
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Strain BT338 (
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<emphasis id="E4C4EABC7716551E2A53A1772613FB73" bold="true" box="[332,352,1132,1156]" pageId="17" pageNumber="102">=</emphasis>
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NIBRBAC000503035) was isolated from a soil sample, Uijeongbu City in
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<collectingRegion id="1474F84C7716551E2921A19727CCFB32" country="South Korea" name="Gyeonggi" pageId="17" pageNumber="102">Gyeonggi Province</collectingRegion>
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,
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<collectingCountry id="AEA7763E7716551E2BD6A1B6267DFB33" box="[201,270,1197,1220]" name="South Korea" pageId="17" pageNumber="102">Korea</collectingCountry>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |