Add updates up until 2024-11-18 18:41:22
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<treatment id="E421313B26FB5BE2B14C6E2B258322F4" ID-arpha="E421313B-26FB-5BE2-B14C-6E2B258322F4" LSID="urn:lsid:plazi:treatment:E421313B26FB5BE2B14C6E2B258322F4" httpUri="http://treatment.plazi.org/id/E421313B26FB5BE2B14C6E2B258322F4">
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<subSubSection id="067FD2819044947437EACFC0F5D7337C" type="nomenclature">
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<paragraph id="F55A7CFAE486ACEBF72695E37AF54480">
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<treatmentCitation id="5B386AA67FC5B02A1E1BB8E00D9B5779" author="Vain." journal="Meddn Soc. Fauna Flora Fenn." page="173" score="69.61431267672758" volume="48" year="1925">
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<taxonomicName id="3608AF5989526DD636320BEBD51318D5" authority="Vain., Meddn Soc. Fauna" authorityName="Vain., Meddn Soc. Fauna" class="Lecanoromycetes" family="Parmeliaceae" genus="Usnea" kingdom="Animalia" order="Lecanorales" phylum="Ascomycota" rank="species" species="lapponica">
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<taxonomicName id="1E2BB8909F29A79EF97D5192F3385839" ID-CoL="7F32L" authority="Vain." authorityName="Vain." class="Lecanoromycetes" family="Parmeliaceae" genus="Usnea" kingdom="Fungi" order="Lecanorales" phylum="Ascomycota" rank="species" species="lapponica">
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<emphasis id="F12C8EAE5FF1186AE5DA292152D05379" italics="true">Usnea lapponica</emphasis>
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Vain., Meddn Soc. Fauna
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Vain.
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</taxonomicName>
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||||
Flora Fenn. 48: 173 (1925)
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, Meddn Soc. Fauna Flora Fenn. 48: 173 (1925)
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</treatmentCitation>
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||||
[1924]
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</paragraph>
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||||
|
|
@ -127,10 +127,7 @@ cross-section of the branch showing central strand.
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<paragraph id="A29FB61CCA33927733D01FA6AC2400E7">
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||||
<heading id="14ED6D23950A23B0B0AB663BDEAEF80A" reason="title">Chemical study.</heading>
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</paragraph>
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<paragraph id="7F7AE46FEF178DB7365A58341CF8EE52">
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<collectionCode id="4AD81EFFDADEE60B050153A9C0E6F853" country="United Kingdom" lsid="urn:lsid:biocol.org:col:15867" name="Royal Botanic Gardens" type="Herbarium">K</collectionCode>
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||||
+ ve (yellow), C-ve, KC + ve (yellow). Usnic acid and salazinic acid were detected through TLC.
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</paragraph>
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<paragraph id="7F7AE46FEF178DB7365A58341CF8EE52">K + ve (yellow), C-ve, KC + ve (yellow). Usnic acid and salazinic acid were detected through TLC.</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EESAG" type="Phylogenetic analysis">
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<paragraph id="C39CBABCF2670289393E2F009F2854DF">
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@ -141,26 +138,18 @@ For phylogenetic analysis, sequences of the genus
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<taxonomicName id="869E750A0E703F480A9831FA8A05354D" class="Lecanoromycetes" family="Parmeliaceae" genus="Usnea" kingdom="Fungi" order="Lecanorales" phylum="Ascomycota" rank="genus">
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<emphasis id="2165FF62A02F7E031000B60A8EF35B3D" italics="true">Usnea</emphasis>
|
||||
</taxonomicName>
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||||
were retrieved from GenBank based on their similarity to our sequences.
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<collectionCode id="A84C21A4D94149527B289C5CD15212B9" country="USA" lsid="urn:lsid:biocol.org:col:15406" name="Harvard University - Arnold Arboretum" type="Herbarium">A</collectionCode>
|
||||
total of 31 ITS nrDNA sequences were analyzed during this study. The final aligned file was comprised of 503 nucleotides, among which 397 were conserved, 104 were variable, 88 were parsimony-informative, and 16 were singleton variants.
|
||||
were retrieved from GenBank based on their similarity to our sequences. A total of 31 ITS nrDNA sequences were analyzed during this study. The final aligned file was comprised of 503 nucleotides, among which 397 were conserved, 104 were variable, 88 were parsimony-informative, and 16 were singleton variants.
|
||||
<taxonomicName id="A5C3917FAA6E2825EBBE1F45E12186E7" authority="(Mont.) Krog" authorityName="Krog" baseAuthorityName="Mont." class="Lecanoromycetes" family="Parmeliaceae" genus="Protousnea" kingdom="Fungi" order="Lecanorales" phylum="Ascomycota" rank="species" species="magellanica">
|
||||
<emphasis id="5F72CFEB07238F20A5A91AEF816D931D" italics="true">Protousnea magellanica</emphasis>
|
||||
(Mont.) Krog
|
||||
</taxonomicName>
|
||||
(
|
||||
<ext-link id="C5C51E74B4A12AADC8AC74E318DCA995" ext-link-type="gen" xlink_href="DQ985192" xlink_type="simple">
|
||||
<accessionNumber id="F2D20B64528F05548ABE84649478A221" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/DQ985192">
|
||||
<collectionCode id="1DBFBF5E91E3DF7A3CF2E82E45FC9E7F">DQ</collectionCode>
|
||||
985192
|
||||
</accessionNumber>
|
||||
<accessionNumber id="F2D20B64528F05548ABE84649478A221" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/DQ985192">DQ 985192</accessionNumber>
|
||||
</ext-link>
|
||||
and
|
||||
<ext-link id="C81E261381B23C94DB56119E05CC3AB4" ext-link-type="gen" xlink_href="KR995309" xlink_type="simple">
|
||||
<accessionNumber id="4BA91F21517F65758ACB28E282188381" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KR995309">
|
||||
<collectionCode id="07DCFEC80A44453B9110A7B02DC7E7B9" country="Germany" lsid="urn:lsid:biocol.org:col:15288" name="Staatliches Museum für Naturkunde Karlsruhe" type="Herbarium">KR</collectionCode>
|
||||
995309
|
||||
</accessionNumber>
|
||||
<accessionNumber id="4BA91F21517F65758ACB28E282188381" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KR995309">KR 995309</accessionNumber>
|
||||
</ext-link>
|
||||
) was chosen as an outgroup. In the ITS phylogram, the sequence of the Pakistani
|
||||
<taxonomicName id="7FB567F40AFDAFEBEBA8A7C35B686228" class="Lecanoromycetes" family="Parmeliaceae" genus="Usnea" kingdom="Fungi" order="Lecanorales" phylum="Ascomycota" rank="species" species="lapponica">
|
||||
|
|
@ -170,37 +159,25 @@ specimen forms a clade along with sequences of the same taxon reported from
|
|||
<collectingCountry id="9BE3C4829389F80CC6644C3E3990AFAD" name="Austria">Austria</collectingCountry>
|
||||
(
|
||||
<ext-link id="AD2FB989837A963737ECC0059DA4C529" ext-link-type="gen" xlink_href="KJ406267" xlink_type="simple">
|
||||
<accessionNumber id="B36E0B7B8144E2322F4E1139086449BB" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KJ406267">
|
||||
<collectionCode id="15314E251B6E9CE0390170A63BAB8A79">KJ</collectionCode>
|
||||
406267
|
||||
</accessionNumber>
|
||||
<accessionNumber id="B36E0B7B8144E2322F4E1139086449BB" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KJ406267">KJ 406267</accessionNumber>
|
||||
</ext-link>
|
||||
),
|
||||
<collectingCountry id="62FC84C1D6C1F2D844693FE22D5A5568" name="India">India</collectingCountry>
|
||||
(
|
||||
<ext-link id="EE84AD77E07275FD2E21D80BBF6A01C8" ext-link-type="gen" xlink_href="KJ406266" xlink_type="simple">
|
||||
<accessionNumber id="1940EC3956A8FE7E9D154DA616793428" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KJ406266">
|
||||
<collectionCode id="E1A188476CE7C353868D4E7D5332A5B2">KJ</collectionCode>
|
||||
406266
|
||||
</accessionNumber>
|
||||
<accessionNumber id="1940EC3956A8FE7E9D154DA616793428" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KJ406266">KJ 406266</accessionNumber>
|
||||
</ext-link>
|
||||
),
|
||||
<collectingCountry id="1FBCB1269651BAC91738DC5E97F90E96" name="Sweden">Sweden</collectingCountry>
|
||||
(
|
||||
<ext-link id="9D71521F1848C04197BC0410315240F3" ext-link-type="gen" xlink_href="KJ406265" xlink_type="simple">
|
||||
<accessionNumber id="5FD4A61ADB749586E971DCD02335989C" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KJ406265">
|
||||
<collectionCode id="19B97252467FF1140AEC80B013A6B329">KJ</collectionCode>
|
||||
406265
|
||||
</accessionNumber>
|
||||
<accessionNumber id="5FD4A61ADB749586E971DCD02335989C" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KJ406265">KJ 406265</accessionNumber>
|
||||
</ext-link>
|
||||
), and
|
||||
<collectingCountry id="C05E0894DDFD21006251517C06D7C742" name="Switzerland">Switzerland</collectingCountry>
|
||||
(
|
||||
<ext-link id="4FD5A662656747C2F2ACB9D323F7A2B0" ext-link-type="gen" xlink_href="KX132930" xlink_type="simple">
|
||||
<accessionNumber id="1CCE91AEDC015DB761A725B890B7667C" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KX132930">
|
||||
<collectionCode id="A5918BE9E7EF579B6E61B893346DC8BC">KX</collectionCode>
|
||||
132930
|
||||
</accessionNumber>
|
||||
<accessionNumber id="1CCE91AEDC015DB761A725B890B7667C" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KX132930">KX 132930</accessionNumber>
|
||||
</ext-link>
|
||||
) (Fig.
|
||||
<figureCitation id="E806BE5C4E189235188C7E2971FFA700" captionStart="Figure 10" captionStartId="F10" captionText="Figure 10. Molecular phylogenetic analysis of Usnea spp. by maximum likelihood (ML) method based on nrITS sequences. Bootstrap values > 50 % based on 1000 replicates for ML are shown above the branches and novel sequence generated during this study is in bold." figureDoi="10.3897/italianbotanist.18.133246.figure10" httpUri="https://binary.pensoft.net/fig/1176882">10</figureCitation>
|
||||
|
|
@ -269,11 +246,7 @@ Thalli of selected lichen species showing distinct morphological characteristics
|
|||
<paragraph id="753D3F1E99C7392190AFE8D97E80B01F">
|
||||
Corticolous, found at an elevation above
|
||||
<quantity id="C5D107DCE4A4756DAA6C9DD5B04802CB" metricMagnitude="3" metricUnit="m" metricValue="3.228" unit="m" value="3228.0">3,228 m</quantity>
|
||||
, growing in a cold and dry temperate mountainous region, with a mean maximum and minimum temperature of 22 °
|
||||
<collectionCode id="5C404C704D1403F62C37F73AF1882735" country="Denmark" name="University of Copenhagen" type="Herbarium">C</collectionCode>
|
||||
and - 18 °
|
||||
<collectionCode id="8D932C7962F56C710848B0535E344154" country="Denmark" name="University of Copenhagen" type="Herbarium">C</collectionCode>
|
||||
, respectively, and an annual rainfall varying between 254 and
|
||||
, growing in a cold and dry temperate mountainous region, with a mean maximum and minimum temperature of 22 ° C and - 18 ° C, respectively, and an annual rainfall varying between 254 and
|
||||
<quantity id="DF39C9E2DF0776F0A0B642F399AE5E1A" metricMagnitude="-1" metricUnit="m" metricValue="4.0" unit="mm" value="400.0">400 mm</quantity>
|
||||
. The dominant vegetation includes
|
||||
<taxonomicName id="1295C186873C3A2C56CB1994DDDE4264" authority="(Wall.) Boiss" authorityName="Boiss" baseAuthorityName="Wall." class="Pinopsida" family="Pinaceae" genus="Picea" kingdom="Plantae" order="Pinales" phylum="Tracheophyta" rank="species" species="smithiana">
|
||||
|
|
@ -317,21 +290,21 @@ This species is widespread in Europe,
|
|||
<heading id="7929CC86B0D8F307CBABA9C2043BC424" reason="title">Material examined.</heading>
|
||||
</paragraph>
|
||||
<paragraph id="115205C1845BB5C3F3105D6E47BAAEAE">
|
||||
<materialsCitation id="C505F890FFEC697D6AF6559725567CC5" collectingDate="2023-08-30" collectionCode="U, F, M, A, N" collectorName="Ahmad & Usman & Khalid & GenBank" country="Pakistan" county="Blue Lake" elevation="3228" latitude="36.236668" location="Gilgit-Baltistan" longLatPrecision="118" longitude="74.10167" municipality="Naltar Valley" specimenCount="1">
|
||||
<materialsCitation id="C505F890FFEC697D6AF6559725567CC5" collectedFrom="growing on bark" collectingDate="2023-08-30" collectionCode="U, F, M, A, N" collectorName="U. F. Ahmad & M. Usman & A. N. Khalid" country="Pakistan" county="District Gilgit" elevation="3228" latitude="36.236668" location="Blue Lake" longLatPrecision="118" longitude="74.10167" municipality="Naltar Valley" specimenCount="1" stateProvince="Gilgit-Baltistan">
|
||||
<collectingCountry id="7E4A8F6885F8E7BA1D546B4EC3B45879" name="Pakistan">Pakistan</collectingCountry>
|
||||
∙
|
||||
<location id="57686154739535F29201B1F5870FDE6A" LSID="urn:lsid:plazi:treatment:E421313B26FB5BE2B14C6E2B258322F4:57686154739535F29201B1F5870FDE6A" country="Pakistan" county="Blue Lake" latitude="36.236668" longLatPrecision="118" longitude="74.10167" municipality="Naltar Valley" name="Gilgit-Baltistan">Gilgit-Baltistan</location>
|
||||
<collectingRegion id="039AE5D27D41C1DB04D9DE731ECE4540">Gilgit-Baltistan</collectingRegion>
|
||||
,
|
||||
<location id="93265E922A7992AE2DEA50ED59FB93A7" LSID="urn:lsid:plazi:treatment:E421313B26FB5BE2B14C6E2B258322F4:93265E922A7992AE2DEA50ED59FB93A7" country="Pakistan" county="Blue Lake" latitude="36.236668" longLatPrecision="118" longitude="74.10167" municipality="Naltar Valley" name="District Gilgit">District Gilgit</location>
|
||||
<collectingCounty id="76E4BE31C2E171B3449BCA9A41D02EA8">District Gilgit</collectingCounty>
|
||||
,
|
||||
<collectingMunicipality id="5873D520449BA5B76F2AA22C1F2D84F6">Naltar Valley</collectingMunicipality>
|
||||
,
|
||||
<collectingCounty id="F96BAA73B32CA45F3607568C3067F292">Blue Lake</collectingCounty>
|
||||
<location id="1C1F80529D84EE4B74A732C40FAA4318" LSID="urn:lsid:plazi:treatment:E421313B26FB5BE2B14C6E2B258322F4:1C1F80529D84EE4B74A732C40FAA4318" country="Pakistan" county="District Gilgit" latitude="36.236668" longLatPrecision="118" longitude="74.10167" municipality="Naltar Valley" name="Blue Lake" stateProvince="Gilgit-Baltistan">Blue Lake</location>
|
||||
;
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0EXZAG" specific-use="{"type":"Point","coordinates":[74.101667,36.236667]}">
|
||||
<geoCoordinate id="965D8CCB310C4A6D9192E3639247DD3C" degrees="36" direction="north" minutes="14.2" orientation="latitude" precision="92" value="36.236668">36 ° 14.2 ' N</geoCoordinate>
|
||||
<geoCoordinate id="965D8CCB310C4A6D9192E3639247DD3C" degrees="36" direction="north" minutes="14.2" orientation="latitude" precision="92" value="36.236668">36°14.2'N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="58DCAC04E96F797CE2DAAD0A261E79FC" degrees="74" direction="east" minutes="06.1" orientation="longitude" precision="92" value="74.10167">74 ° 06.1 ' E</geoCoordinate>
|
||||
<geoCoordinate id="58DCAC04E96F797CE2DAAD0A261E79FC" degrees="74" direction="east" minutes="06.1" orientation="longitude" precision="92" value="74.10167">74°06.1'E</geoCoordinate>
|
||||
</named-content>
|
||||
; alt.
|
||||
<elevation id="180425B0F1DE40C72F5F9F36BE3EB988" metricMagnitude="3" metricUnit="m" metricValue="3.228" unit="m" value="3228.0">
|
||||
|
|
@ -343,24 +316,14 @@ a. s. l.
|
|||
<collectingDate id="70418403E49B56FAE0D7268901CDFD8E" value="2023-08-30">30 Aug. 2023</collectingDate>
|
||||
</date>
|
||||
;
|
||||
<collectionCode id="3EA746C7A19E48382028A93841C49828" country="Netherlands" lsid="urn:lsid:biocol.org:col:15513" name="Nationaal Herbarium Nederland" type="Herbarium">U</collectionCode>
|
||||
.
|
||||
<collectionCode id="32E461A7F72C8747A1D2B68B8933824A" country="USA" lsid="urn:lsid:biocol.org:col:15707" name="Field Museum of Natural History, Botany Department" type="Herbarium">F</collectionCode>
|
||||
.
|
||||
<collectorName id="D77CC4025CB18AF7AB0E24C7D915FB5D">Ahmad</collectorName>
|
||||
<collectorName id="6531132EF6BCFBC583F800D5D232328D">U. F. Ahmad</collectorName>
|
||||
,
|
||||
<collectionCode id="7FAE9C44433335EC7AB9438B8C5FB0E7" country="Germany" lsid="urn:lsid:biocol.org:col:15637" name="Botanische Staatssammlung München" type="Herbarium">M</collectionCode>
|
||||
.
|
||||
<collectorName id="A533F727A60096A996AFF05ED06A2812">Usman</collectorName>
|
||||
<collectorName id="0C64FA3522DC6BF080385BB36E3447F8">M. Usman</collectorName>
|
||||
&
|
||||
<collectionCode id="593C454F53CC4EA1EC8F11358EE50E88" country="USA" lsid="urn:lsid:biocol.org:col:15406" name="Harvard University - Arnold Arboretum" type="Herbarium">A</collectionCode>
|
||||
.
|
||||
<collectionCode id="BD2AA17730AB77F147CCC72B14D97AE3" country="China" lsid="urn:lsid:biocol.org:col:13092" name="Nanjing University" type="Herbarium">N</collectionCode>
|
||||
.
|
||||
<collectorName id="EFAFF268AF53A8107C9A095ACBC00F28">Khalid</collectorName>
|
||||
leg.; growing on bark; NL- 1, ITS
|
||||
<collectorName id="09561F0BE67B791113FFC4572CA2711E">GenBank</collectorName>
|
||||
accession number
|
||||
<collectorName id="A0686749C7F9C03E1B6F31F6D392CD9D">A. N. Khalid</collectorName>
|
||||
leg.;
|
||||
<collectedFrom id="104EC9C6221A72534A3419DF1D6F68B2">growing on bark</collectedFrom>
|
||||
; NL- 1, ITS GenBank accession number
|
||||
<ext-link id="E7B4317F6AD6C031D0BB2DA3E6B106E5" ext-link-type="gen" xlink_href="PQ113701" xlink_type="simple">PQ 113701</ext-link>
|
||||
</materialsCitation>
|
||||
.
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue