Add updates up until 2024-08-09 17:10:58
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data/DC/C9/36/DCC9362CCDEF56DDBFCC23F4F2B5B9C2.xml
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<document id="9E77A283CF9FD335D06FC8360BB3075D" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="DCC9362CCDEF56DDBFCC23F4F2B5B9C2" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Parnigua Tedersoo 2024, gen. nov." docType="treatment" docVersion="1" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723223268898" updateUser="pensoft">
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<mods:titleInfo id="6A99346B2E61E778901853EADE8AB3BB">
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<mods:title id="DFE50A636C292DC58C81110A5C0462DE">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
|
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</mods:titleInfo>
|
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<mods:name id="063AF7FA9E112CD7AD9332943B76D44D" type="personal">
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<mods:role id="774C9DFE14B5F0540509EA6B289A11A4">
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<mods:roleTerm id="666DCC9B8299623DEE853A862A2FA159">Author</mods:roleTerm>
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</mods:role>
|
||||
<mods:namePart id="612073C2180EA042A10838FFA07CDE23">Tedersoo, Leho</mods:namePart>
|
||||
<mods:affiliation id="FBD06550EF90F8B1079E650E1B5B247C">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="AC0798531C71ABA89E261F544E39DB1F" type="personal">
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<mods:role id="22BA74ED4112BF74F47E7431EFF47167">
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<mods:roleTerm id="729150B64CFC712CC784CB1183880CEA">Author</mods:roleTerm>
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</mods:role>
|
||||
<mods:namePart id="2F33ABA4E6960D0354ADB9E8DDE0C5BD">Magurno, Franco</mods:namePart>
|
||||
<mods:nameIdentifier id="7C00EDD50F5B43D6AA23304DBC58FF35" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
|
||||
<mods:affiliation id="B1C85EC6C4B265F73AAE69E1E6B5A118">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
|
||||
</mods:name>
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<mods:name id="DC62CECABAE6453DE9D99BFA2696B38A" type="personal">
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<mods:roleTerm id="1102CAF09637772A03DEE649E3A35963">Author</mods:roleTerm>
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</mods:role>
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||||
<mods:namePart id="DCC867D7D9E8D58EC1D97C03FA2A5633">Alkahtani, Saad</mods:namePart>
|
||||
<mods:nameIdentifier id="56267CB2A02DA58B0BEC4E12D88280E8" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
|
||||
<mods:affiliation id="5FD18BDD790D70688F7115191274F718">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="33292622E96B09DE30F1464D21B5B952" type="personal">
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<mods:roleTerm id="79E728588346C8ED165BBE7C7FD9CBF3">Author</mods:roleTerm>
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</mods:role>
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||||
<mods:namePart id="189EB513981CFD314677D39809CF5879">Mikryukov, Vladimir</mods:namePart>
|
||||
<mods:nameIdentifier id="367A468A4927ABFD4EEEAF2851E304DB" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
|
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<mods:affiliation id="9DE53FC625FB6F8AE497B34D6DBB0727">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
|
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</mods:name>
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<mods:typeOfResource id="4C4B2DF30965B659863AF35BF2283A2C">text</mods:typeOfResource>
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<mods:titleInfo id="BD7DFB7BD28E78432599B8208B048306">
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<mods:title id="8281A0DFE81DB34F647FDC251A0597BE">MycoKeys</mods:title>
|
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</mods:titleInfo>
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<mods:part id="D9A5B81A6A27404981CB0B06B845CF24">
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||||
<mods:date id="C6CFCE62E6A38B83965CBDE4536E3CA2">2024</mods:date>
|
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<mods:detail id="D0DA051031E28C01DE1F50A78A3ED00E" type="pubDate">
|
||||
<mods:number id="0CBD4649F0309E32F2020FB2A27772BC">2024-08-09</mods:number>
|
||||
</mods:detail>
|
||||
<mods:detail id="681770D0003F591FD237AC35BF98E4FF" type="volume">
|
||||
<mods:number id="5E3431117821BF72437CDC693CB33187">107</mods:number>
|
||||
</mods:detail>
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<mods:extent id="CBF12DBBB1AD37FDDF56A10A4ACEFA61" unit="page">
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<mods:start id="0805E679D686CB977C8CA5E2DCBFD9A3">249</mods:start>
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<mods:end id="BEA5239A7719407F424C773878658DF8">271</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification id="507C1DBFFB53CDA0CDBCD26DBCAEB1A4">journal article</mods:classification>
|
||||
<mods:identifier id="9E7294DB26ED4A574EF02C264AD248A7" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
|
||||
</mods:mods>
|
||||
<treatment id="DCC9362CCDEF56DDBFCC23F4F2B5B9C2" ID-arpha="DCC9362C-CDEF-56DD-BFCC-23F4F2B5B9C2" ID-mycobank="853610" LSID="urn:lsid:plazi:treatment:DCC9362CCDEF56DDBFCC23F4F2B5B9C2" httpUri="http://treatment.plazi.org/id/DCC9362CCDEF56DDBFCC23F4F2B5B9C2">
|
||||
<subSubSection id="525C41A1A783E8989888FC7E1EF900F7" type="nomenclature">
|
||||
<paragraph id="FC94F9FDE3D5CD7C801D9ED8C71B045D">
|
||||
<taxonomicName id="F1010DF6CFEE1A5D12FB560B7E3E357B" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" class="Magnoliopsida" family="Parniguaceae" genus="Parnigua" kingdom="Fungi" order="Parniguales" phylum="Tracheophyta" rank="genus" status="gen. nov.">
|
||||
<emphasis id="9865351C0E46BF9449B115FA7394F1B1" italics="true">Parnigua</emphasis>
|
||||
Tedersoo
|
||||
</taxonomicName>
|
||||
<taxonomicNameLabel id="3CFD91D62A244765C8B23D3BCBD65043" rank="genus">gen. nov.</taxonomicNameLabel>
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0E1MBK" type="type species">
|
||||
<paragraph id="0872619425562E9F9A1F358810217CA0">
|
||||
<heading id="8619376768D84812B9AC576D7FDF5D7A" reason="title">
|
||||
<typeStatus id="6C7175521E9CE7B730D2C6725BBE181C">Type</typeStatus>
|
||||
species.
|
||||
</heading>
|
||||
</paragraph>
|
||||
<paragraph id="676DF0B3BFE884A285CB1652BF89D33F">
|
||||
<taxonomicName id="45AA7291C9F191D246BF56A67DE0EFE3" authority="Tedersoo." authorityName="Tedersoo." class="Magnoliopsida" family="Dipterocarpaceae" genus="Parnigua" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="species" species="craigii">
|
||||
<emphasis id="00CBC3B976034D65ED70212520C7AF03" italics="true">Parnigua craigii</emphasis>
|
||||
Tedersoo.
|
||||
</taxonomicName>
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0ELNBK" type="description">
|
||||
<paragraph id="BE60D99B57E224D60B2804B36D7FC119">
|
||||
<heading id="EB515F7EAE0A19C8A4AB6A6D5C3A2A86" reason="title">Description.</heading>
|
||||
</paragraph>
|
||||
<paragraph id="8BE1E8F6B9929C7256EFCDCE51FE3A3A">
|
||||
Covers the monophyletic group in
|
||||
<tp_taxon-name id="990C80E19689D2517B7BF2B2EB219D8F">
|
||||
<tp_taxon-name-part id="128DE95680F299420EFDD6C0689539C0" taxon-name-part-type="family">Parniguaceae</tp_taxon-name-part>
|
||||
</tp_taxon-name>
|
||||
(Fig.
|
||||
<figureCitation id="93B41D0B9D04A189D585026CAFE968B3" captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogenetic position of genera and genus-level groups of Endogonomycetes based on Maximum Likelihood analysis of SSU- 5.8 S-LSU sequences. The clades are collapsed, with the number of sequences included in parentheses. Question marks above branches indicate low ultra-rapid bootstrap support (< 95). Orders are highlighted in different colours. The uncollapsed phylogram is given in Suppl. material 3." figureDoi="10.3897/mycokeys.107.125549.figure2" httpUri="https://binary.pensoft.net/fig/1111389">2</figureCitation>
|
||||
). Phylogenetically delimited as the least inclusive clade covering sequence accessions EUK 1635261 and EUK 1602353 (Suppl. material
|
||||
<xref id="FF9196ACBA938F6CB2DD830B55A229E0" ref-type="supplementary-material" rid="S3">3</xref>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0E5NBK" type="notes">
|
||||
<paragraph id="84A35E966D1FA50CAF2FF972AA3AED6A">
|
||||
<heading id="34776E611100EDF6B77A02CE61008C1E" reason="title">Notes.</heading>
|
||||
</paragraph>
|
||||
<paragraph id="12B05E6C6E3468444629D4FF022FE6AC">
|
||||
Based on stringent criteria, there are around five species in this genus, but all these may represent a single variable biological species. In this genus, across and within species, the
|
||||
<abbrev id="ABBRID0EEOBK" xlink_title="internal transcribed spacer">
|
||||
<collectionCode id="9F35140964CCF5B294B53D32D814A86C">ITS</collectionCode>
|
||||
</abbrev>
|
||||
region has very low variability when compared with
|
||||
<collectionCode id="273DCF98D2CF745A0CBECCBE1DC20FEF" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15590" lsid="urn:lsid:biocol.org:col:15590" name="Louisiana State University - Herbarium" type="Herbarium">LSU</collectionCode>
|
||||
(up to 3 % differences across species). Other putative species in
|
||||
<taxonomicName id="5940789D75A40D88279D851C4934BA96" class="Magnoliopsida" family="Dipterocarpaceae" genus="Parnigua" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
|
||||
<emphasis id="EA9F5480C34B8F0FBC0B2A0544487F8A" italics="true">Parnigua</emphasis>
|
||||
</taxonomicName>
|
||||
are represented by sequences EUK 1602947 (
|
||||
<abbrev id="ABBRID0EPOBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
||||
plot
|
||||
<collectionCode id="23287887EC2793077F9C67EA0E399B25" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
||||
4444, mixed forest soil in Altnurga,
|
||||
<collectingCountry id="DB38A49C73D910D1DA83B3E8D5798D13" name="Estonia">Estonia</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0EWOBK" specific-use="{"type":"Point","coordinates":[26.283210,58.536760]}">
|
||||
<geoCoordinate id="2B8EF4B7BB25419F1552D6254469244D" degrees="58.53676" direction="north" orientation="latitude" precision="1" value="58.53676">58.53676 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="F2EA962C98A87F7CB71DAE9697E6AB2D" degrees="26.28321" direction="east" orientation="longitude" precision="1" value="26.28321">26.28321 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
); EUK 1603686 (
|
||||
<abbrev id="ABBRID0E2OBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
||||
plot
|
||||
<collectionCode id="B0DA7C834259CDE3BA4B1021118B21BB" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
||||
5844, wet pasture land soil in Tuhala,
|
||||
<collectingCountry id="98FC543131CD0D9BA812F6C1FCA095DC" name="Estonia">Estonia</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0ECPBK" specific-use="{"type":"Point","coordinates":[25.002830,59.230030]}">
|
||||
<geoCoordinate id="6C692746083760C89A6C90C6AA221694" degrees="59.23003" direction="north" orientation="latitude" precision="1" value="59.23003">59.23003 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="6D7D900BD4E58AE7FAD4888FBB15D6D9" degrees="25.00283" direction="east" orientation="longitude" precision="1" value="25.00283">25.00283 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
); EUK 1633696 (
|
||||
<abbrev id="ABBRID0EHPBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
||||
plot
|
||||
<collectionCode id="EB94A1C243F775E9D0E719AE14599913" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
||||
4207
|
||||
<taxonomicName id="535DB1442E7F31F319807AE066D037C8" class="Magnoliopsida" family="Malvaceae" genus="Tilia" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="species" species="cordata">
|
||||
<emphasis id="D721D27E205B529853E4EEE84368D55A" italics="true">Tilia cordata</emphasis>
|
||||
</taxonomicName>
|
||||
forest soil in Ubari,
|
||||
<collectingCountry id="C0DD2C40C173C928C2E0685C872C8BDA" name="Estonia">Estonia</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0EZPBK" specific-use="{"type":"Point","coordinates":[25.285663,59.492609]}">
|
||||
<geoCoordinate id="E872E40C9A8C370F4D7B2C0068008A1B" degrees="59.492609" direction="north" orientation="latitude" precision="1" value="59.492607">59.492609 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="3D66A1AB056E20380709E74DABC60E00" degrees="25.285663" direction="east" orientation="longitude" precision="1" value="25.285664">25.285663 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
); EUK 1603848 (
|
||||
<abbrev id="ABBRID0E5PBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
||||
plot
|
||||
<collectionCode id="36B7247252339C2196FBB6C97CFEFA93" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
||||
5883, flooded grassland soil in Kasari,
|
||||
<collectingCountry id="7489225F7486F640E56B46439CE75991" name="Estonia">Estonia</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0EFQBK" specific-use="{"type":"Point","coordinates":[23.985990,58.736080]}">
|
||||
<geoCoordinate id="B49C4CB2AAD4F90C5C5C92E4187B3653" degrees="58.73608" direction="north" orientation="latitude" precision="1" value="58.73608">58.73608 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="A458D7CDC96ED716C42002CE463E21BC" degrees="23.98599" direction="east" orientation="longitude" precision="1" value="23.98599">23.98599 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
); EUK 1602353 (
|
||||
<abbrev id="ABBRID0EKQBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
||||
plot
|
||||
<collectionCode id="033D3B942834B13F1A4E91DBC4B0A29F" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
||||
4389,
|
||||
<emphasis id="61BCABA95FFB3979BE1523D9EB75CD21" italics="true">
|
||||
<taxonomicName id="94F8347F3E7E0AAEF51DE0A497ABD466" class="Magnoliopsida" family="Fagaceae" genus="Quercus" kingdom="Plantae" order="Fagales" phylum="Tracheophyta" rank="genus">Quercus</taxonomicName>
|
||||
-
|
||||
<taxonomicName id="F1FEFA06D003507EEC89701C5076AE23" class="Magnoliopsida" family="Malvaceae" genus="Tilia" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">Tilia</taxonomicName>
|
||||
</emphasis>
|
||||
forest soil in Naha,
|
||||
<collectingCountry id="9BDE588D161C2E790CDE6D3BEE97A848" name="Estonia">Estonia</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0EYQBK" specific-use="{"type":"Point","coordinates":[26.601199,57.520914]}">
|
||||
<geoCoordinate id="588E48317571C23E9D2224969F2851F4" degrees="57.520914" direction="north" orientation="latitude" precision="1" value="57.520912">57.520914 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="26FB11FD7DA9FE048BE8EFF68907EDBD" degrees="26.601199" direction="east" orientation="longitude" precision="1" value="26.601198">26.601199 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
);
|
||||
<ext-link id="73BE090267DC43AC7C4132AF0890DAF8" ext-link-type="gen" xlink_href="MF484762" xlink_type="simple">MF 484762</ext-link>
|
||||
(agricultural soil in
|
||||
<collectingCountry id="89D81366C67D4E128FC8335DB61D68F4" name="United Kingdom">England</collectingCountry>
|
||||
); and
|
||||
<ext-link id="DD3F2541EB01334C96399A348A6413B3" ext-link-type="gen" xlink_href="MW163928" xlink_type="simple">
|
||||
<collectionCode id="09B7376F69ECF7C2AE0FCE617DBF2CB4" country="Netherlands" name="Museum Wasmann">MW</collectionCode>
|
||||
163928
|
||||
</ext-link>
|
||||
(
|
||||
<taxonomicName id="42C0E0B86D2C57BC21ECF4BC30F0E883" class="Liliopsida" family="Iridaceae" genus="Crocus" kingdom="Plantae" order="Asparagales" phylum="Tracheophyta" rank="species" species="sativus">
|
||||
<emphasis id="EA14A555ACD96802C511F35DC4E43467" italics="true">Crocus sativus</emphasis>
|
||||
</taxonomicName>
|
||||
cropland soil in
|
||||
<collectingRegion id="22A8FB78EF660367479AA206CEAEFE4E" country="Italy" name="Valle d'Aosta">Aosta Valley</collectingRegion>
|
||||
,
|
||||
<collectingCountry id="ACDFFF2240FF7D297DDDBD538C307B8A" name="Italy">Italy</collectingCountry>
|
||||
). The genus can be found from various soils but not from roots. However,
|
||||
<collectionCode id="8ED92EF272340B328C33837D2B7B95CD" country="0" httpUri="http://grbio.org/cool/fye2-vfes" name="Saratov State University" type="">SSU</collectionCode>
|
||||
sequences are lacking, and links to
|
||||
<abbrev id="ABBRID0ESRBK" xlink_title="Arbuscular mycorrhizal">
|
||||
<collectionCode id="58D6DF86126A302D09160D28FBE23592" country="Australia" name="Australian Museum" type="Museum">AM</collectionCode>
|
||||
</abbrev>
|
||||
fungi in SSU-based studies cannot be tested.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
</treatment>
|
||||
</document>
|
||||
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Reference in a new issue