Add updates up until 2024-08-09 17:10:58
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data/A2/00/4B/A2004B52C41B510F93D814C7C8D1AD94.xml
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<document id="E9EFE3BFDFF8B0959399B65514102FA3" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="A2004B52C41B510F93D814C7C8D1AD94" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Nikkaluokta mahdiehiae Tedersoo 2024, sp. nov." docType="treatment" docVersion="1" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723223268898" updateUser="pensoft">
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<mods:mods id="4A3C11861FD2868F0824304B238B1C1F" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="3FD7EA5BD8BB4547A8F943F553EDF285">
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<mods:title id="2DC231A27559E5E3573B21BD2EF30724">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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</mods:titleInfo>
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<mods:name id="70BA35CDA397E10ABA89B8A562298021" type="personal">
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<mods:role id="EADCDA5C6C2070E6E4C3FFF8B69B206E">
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<mods:roleTerm id="37AF4A94ABDA8B11BD32ECC71766F59B">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="AE8685D2450091D14DA6DC5ED08DF49C">Tedersoo, Leho</mods:namePart>
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<mods:affiliation id="CFCFCF2047195D937DC34444CDFE1298">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="F31BE9C7481DB9B755F51CCE11B644EF" type="personal">
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<mods:role id="2D0BB5094C91F217D8C7676AAF5A3A0C">
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<mods:roleTerm id="6D70293BE76198ECDE9766175ACC8AAF">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="C743F0E8ADC13EEB24E295C0FE8B99CD">Magurno, Franco</mods:namePart>
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<mods:nameIdentifier id="AD3ED8C3B66C71C8EF984168DDDD572D" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
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<mods:affiliation id="AF4319749EF0F7773047905A7E1B9F50">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
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</mods:name>
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<mods:name id="EDDE0EAA7CF7E6D123FF45CCF19B016F" type="personal">
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<mods:role id="0A8446E134ABF07CBE3C04B1260D4A7E">
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<mods:roleTerm id="D461F7D3E8ACE5440441CEA087535281">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="52D2CB879B374931B1B0A1069F142FB9">Alkahtani, Saad</mods:namePart>
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<mods:nameIdentifier id="17F1AA61A3718D0E1C43881958A52160" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
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<mods:affiliation id="F6B49EC74CF85A4451F03B3C37FF39FE">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="51912F1DD3283718D9F25AC221E10F97" type="personal">
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<mods:role id="37B5933DECC5ABC65663B3454A537E30">
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<mods:roleTerm id="7029FAAA47E0FB0881717F067E24D776">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="637FB129A93B72F4A6617A054323B07F">Mikryukov, Vladimir</mods:namePart>
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<mods:nameIdentifier id="8DE84F73DD7E5556C3D5C1BD3A23DCF0" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
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<mods:affiliation id="C4C14E2D4DFA58E1FA1EE5C5C5120CFD">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="23FD4166D5D9CED6C57E42B832AAF21C">text</mods:typeOfResource>
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||||
<mods:relatedItem id="E8F9BB3C67E08B13C9A9BD21988FC44E" type="host">
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||||
<mods:titleInfo id="D9A2546A3047C697A0F8365813D3805E">
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<mods:title id="17FFA1DD212B56F136FBA1805F423D83">MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part id="6B78EEA043A4BF2CB37D73228DEA8731">
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<mods:date id="1A7669AABA9BD123E01D420A3FB2BE16">2024</mods:date>
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<mods:detail id="683C17681FC6D05C4003D45FD50F2190" type="pubDate">
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<mods:number id="AC053F13C68249CFC664802AFE164908">2024-08-09</mods:number>
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</mods:detail>
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<mods:detail id="BFCF3C227B681E3335DCBAB88082830E" type="volume">
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<mods:number id="366794698ACB8EBFB7BEEE8D3764C625">107</mods:number>
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</mods:detail>
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||||
<mods:extent id="618DF3BC338D767527F533DA1EA89D89" unit="page">
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<mods:start id="B25236272EF03C62E71353A7B38CC270">249</mods:start>
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<mods:end id="6700FA01A14F7575C19B922112C5E085">271</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification id="CB2F4B879AEA9EBFA0BA18BF03EC5AAA">journal article</mods:classification>
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<mods:identifier id="87DDDBAB4B2BD35945DF7D3C9167C32B" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
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</mods:mods>
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<treatment id="A2004B52C41B510F93D814C7C8D1AD94" ID-arpha="A2004B52-C41B-510F-93D8-14C7C8D1AD94" ID-mycobank="853607" LSID="urn:lsid:plazi:treatment:A2004B52C41B510F93D814C7C8D1AD94" httpUri="http://treatment.plazi.org/id/A2004B52C41B510F93D814C7C8D1AD94">
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<subSubSection id="EB7C6E3040E09DD04A3A55517CA3888D" type="nomenclature">
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<paragraph id="9E2078B8BA5BA6CFB3BA0985267039B0">
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<taxonomicName id="88478CF59D67A375349E4342A309A2C8" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" class="Magnoliopsida" family="Nikkaluoktaceae" genus="Nikkaluokta" kingdom="Fungi" order="Nikkaluoktales" phylum="Tracheophyta" rank="species" species="mahdiehiae" status="sp. nov.">
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<emphasis id="1F197BA4F55ECF6E361868F31F837467" italics="true">Nikkaluokta mahdiehiae</emphasis>
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Tedersoo
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</taxonomicName>
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<taxonomicNameLabel id="926A2DD249F9CF580EC5BD059D9DC135" rank="species">sp. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EB6AK" type="diagnosis">
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<paragraph id="2B25B753AFD1C21B5B642C61E98A0C5E">
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<heading id="6CB2E13A44D235568695AF5B823C48A2" reason="title">Diagnosis.</heading>
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</paragraph>
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<paragraph id="A4BE06BAEC504B745AD83D0E3EE0F8D3">
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Separation from other species of
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<taxonomicName id="F666D2AC5663ED73AFCD55A6823FFC53" class="Magnoliopsida" family="Dipterocarpaceae" genus="Nikkaluokta" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
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<emphasis id="84ECE6A050CC20018ADAC7C15520D95D" italics="true">Nikkaluokta</emphasis>
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</taxonomicName>
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based on the
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<abbrev id="ABBRID0EO6AK" xlink_title="internal transcribed spacer">
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<collectionCode id="4798D26D59D2F0BD356149F491526463">ITS</collectionCode>
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</abbrev>
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region (positions 97–116 cctgggcaaatttttttttc; one mismatch allowed) and
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<collectionCode id="F330AE075D2E0753A4A9BBFF9573A737" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15590" lsid="urn:lsid:biocol.org:col:15590" name="Louisiana State University - Herbarium" type="Herbarium">LSU</collectionCode>
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(positions 687–717 cttggatataagaagtggaatctacacaaat; one mismatch allowed) as indicated in Fig.
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<figureCitation id="C5611A696132A7B780D58CDF1E73A18B" captionStart="Figure 12" captionStartId="F12" captionText="Figure 12. Diagnostic barcodes for Nikkaluokta mahdiehiae relative to closely-related taxa in ITS 2 and LSU." figureDoi="10.3897/mycokeys.107.125549.figure12" httpUri="https://binary.pensoft.net/fig/1111399">12</figureCitation>
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.
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</paragraph>
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<caption id="6F9FDA643B67E57C0D6F3F79C194FA43" ID-DOI="10.3897/mycokeys.107.125549.figure12" ID-arpha="D32F518B-D212-5133-B380-C08361B747DF" httpUri="https://binary.pensoft.net/fig/1111399" startId="F12">
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<paragraph id="8ED876E58F25CFD3D7E78CE66D67CF94">
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<label id="DC400A1F9D55FD06CF3122979A10AF77">Figure 12.</label>
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</paragraph>
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<paragraph id="56034D65812655CBFB90E8943489127C">
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Diagnostic barcodes for
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<taxonomicName id="BB802A3778F9F99D9718B2DFB05496D0" class="Magnoliopsida" family="Dipterocarpaceae" genus="Nikkaluokta" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="species" species="mahdiehiae">
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<emphasis id="B016BE890907F5D41A2482A2A156C950" italics="true">Nikkaluokta mahdiehiae</emphasis>
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</taxonomicName>
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relative to closely-related taxa in ITS 2 and LSU.
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</paragraph>
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</caption>
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</subSubSection>
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<subSubSection id="SECID0EOABK" type="material">
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<paragraph id="DE7AEC92818C0FD6BC83ADB179EA109B">
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<heading id="A3F9E52810919EA83763BE23F2E37351" reason="title">
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<typeStatus id="5AA621B5E2D5852F4E02C6173B143F6E">Type</typeStatus>
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.
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</heading>
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</paragraph>
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<paragraph id="BC54AF9D06C8DC80A63B266D1F4F1198">
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Soil
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<abbrev id="ABBRID0EUABK" xlink_title="environmental DNA">eDNA</abbrev>
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sample TUE 100497 (
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<emphasis id="0021948938C66AD147F346CD0B46FB31" bold="true" italics="true">
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<typeStatus id="8C890F310A9FB37062E1E932A640B16B" type="holotype">holotype</typeStatus>
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</emphasis>
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);
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<abbrev id="ABBRID0E2ABK" xlink_title="environmental DNA">eDNA</abbrev>
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sequence EUK 1203196 (
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<emphasis id="695EBC260C8B224D9BA914F6E658E909" bold="true" italics="true">
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<typeStatus id="ADC15C7796672BC1A93FD29E4EC14974" type="lectotype">lectotype</typeStatus>
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</emphasis>
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); subarctic
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<taxonomicName id="34B0F65325E7ABA7D1EAD4668A27BD7E" class="Pinopsida" family="Pinaceae" genus="Pinus" kingdom="Plantae" order="Pinales" phylum="Tracheophyta" rank="species" species="sylvestris">
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<emphasis id="B903075548DD7311EE4F50C199A1454A" italics="true">Pinus sylvestris</emphasis>
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</taxonomicName>
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forest (soil sample TUE 000497) in
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<taxonomicName id="3F2F9A823ED630DF0CEA0C74930031DE" class="Magnoliopsida" family="Dipterocarpaceae" genus="Nikkaluokta" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
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<emphasis id="65C14AE61AA645BDD16B4699306D62BC" italics="true">Nikkaluokta</emphasis>
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</taxonomicName>
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,
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<collectingCountry id="87BEA8814AD543F59EEC9FD097D676EB" name="Sweden">Sweden</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EWBBK" specific-use="{"type":"Point","coordinates":[19.475750,67.855960]}">
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<geoCoordinate id="9769CDBCDBBDEEE5EF30BD7EF28B9BA2" degrees="67.85596" direction="north" orientation="latitude" precision="1" value="67.85596">67.85596 ° N</geoCoordinate>
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,
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<geoCoordinate id="6CC7EB48E4BE9EDE68CD2E242A095761" degrees="19.47575" direction="east" orientation="longitude" precision="1" value="19.47575">19.47575 ° E</geoCoordinate>
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</named-content>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0E2BBK" type="description">
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<paragraph id="D97922625A852AF11682176E5E1A58AF">
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<heading id="F42DEF9BC35323D2DB7856C3B00DB9C0" reason="title">Description.</heading>
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</paragraph>
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<paragraph id="1D80B1582C6BA16FB6C92A41C7D2B5C8">
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Other sequences: EUK 1203537 (
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<typeStatus id="3783E4C4A78690C4A246534396D2BE4F">type</typeStatus>
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locality) and EUK 1603797 (
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<abbrev id="ABBRID0EBCBK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="973542FE90C6978248D9EC60E9B655C1" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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5003,
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<taxonomicName id="74FC2651A1E1E6F72A9049AE116C7AB7" class="Pinopsida" family="Pinaceae" genus="Pinus" kingdom="Plantae" order="Pinales" phylum="Tracheophyta" rank="species" species="sylvestris">
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<emphasis id="C1BE41942BECC931F442E7DDF1BB3070" italics="true">Pinus sylvestris</emphasis>
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</taxonomicName>
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forest soil in Naissaare,
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<collectingCountry id="8D8EC57FE7D78F89A1F793FCB4BEF49C" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0ETCBK" specific-use="{"type":"Point","coordinates":[24.545100,59.563400]}">
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<geoCoordinate id="92A974458237AC22B10411C4CA2D09D9" degrees="59.56340" direction="north" orientation="latitude" precision="1" value="59.5634">59.56340 ° N</geoCoordinate>
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,
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<geoCoordinate id="7867DAD1F375DA683C9F45397A4487FE" degrees="24.54510" direction="east" orientation="longitude" precision="1" value="24.5451">24.54510 ° E</geoCoordinate>
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</named-content>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EYCBK" type="etymology">
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<paragraph id="369BA5F56D6D2547FA6880AF1E93E53F">
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<heading id="43F917345684B407A05B5F9A6BB9D066" reason="title">Etymology.</heading>
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</paragraph>
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<paragraph id="65D8B02E402EEB87D30FC4AAB64A1F57">
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<emphasis id="64FFCC88FAE132288F965A5ABB30B4DF" italics="true">Nikkaluokta</emphasis>
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(Sami) refers to
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<typeStatus id="33D837FE2D2177C850D310AB9C27E1B6">type</typeStatus>
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locality; and
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<emphasis id="C0E6844406A8C3228B9F6C82A70064A6" italics="true">Mahdieh</emphasis>
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(Persian) refers to the first name of Mahdieh Hosseyni Moghaddam who sequenced the
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<typeStatus id="CE21DC9A595F9516A5E31D5661AAA765">type</typeStatus>
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materials using target capture protocols.
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0ESDBK" type="notes">
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<paragraph id="31510FBE49265F8C438D2729BE276B15">
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<heading id="AB7EB1B33FE80D3ADF84586F3AD28111" reason="title">Notes.</heading>
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</paragraph>
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<paragraph id="1905865861DB8C3CA66E2895860E8330">
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Found in
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<collectingCountry id="50CEB6D11BC0DEB87EA2960AADE2B1FC" name="Sweden">Sweden</collectingCountry>
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and
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<collectingCountry id="481E320C85965CAE310D8148430A30B3" name="Estonia">Estonia</collectingCountry>
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, with
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<abbrev id="ABBRID0EYDBK" xlink_title="internal transcribed spacer">
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<collectionCode id="317C364D90733A354B0DBC8C7CF058CF">ITS</collectionCode>
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</abbrev>
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and
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<collectionCode id="6B80598C845656C07C4DB9C3B120E781" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15590" lsid="urn:lsid:biocol.org:col:15590" name="Louisiana State University - Herbarium" type="Herbarium">LSU</collectionCode>
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sequences displaying up to 1 % and 0.2 % differences, respectively.
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</paragraph>
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</subSubSection>
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</treatment>
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</document>
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