Add updates up until 2024-08-09 17:10:58
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<document id="D9B962B4246C74D067926DD1E26AB5C4" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="4E815FED51755ABFBDE7D2E8BCEEDB04" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Riederbergales Tedersoo 2024, ord. nov." docType="treatment" docVersion="1" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723223268898" updateUser="pensoft">
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<mods:titleInfo id="402438DC1E3024D9CDA26795F8958678">
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<mods:title id="F1484B36850A2A2F8DD7F1C67B19D01F">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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<mods:name id="1CB0FDE141E0CACE519CF4D2A73D131D" type="personal">
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<mods:role id="1F32ABE89ACFA4076D058223B6E3B95C">
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<mods:roleTerm id="30AB12582E01265496CD10ABE6F569DC">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="734D4D099DD401090BFAD7552E4F32C1">Tedersoo, Leho</mods:namePart>
|
||||
<mods:affiliation id="5A2201915578C43741293C994E98B301">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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<mods:name id="B4EE556672ACD922F73677612C3DC826" type="personal">
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<mods:roleTerm id="2D94462462345333D6EAD9E20CD07BE7">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="23B6ED78F8F8BD489079F30318353ED7">Magurno, Franco</mods:namePart>
|
||||
<mods:nameIdentifier id="328F9C355190EB7C74992232322AEB39" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
|
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<mods:affiliation id="8EA23D92AB72B00942B229BE336134CA">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
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</mods:name>
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<mods:name id="B385F80E3D21F3F4BEDD0022F770669B" type="personal">
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<mods:roleTerm id="AAC6E4A69B6F0F7A7836602896F24F6E">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="8610DEDA519C5C4119FD538C1849F74E">Alkahtani, Saad</mods:namePart>
|
||||
<mods:nameIdentifier id="8C7696B68D0628F97DEED41F38904BB4" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
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<mods:affiliation id="9B235A37B545DC8576F0973FFDD72E55">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="11863D3AFE47A75DD419DD809D5020ED" type="personal">
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<mods:roleTerm id="FB88BC41202DDF7DE39982271D26471C">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="B6DB6A32C521AC84DA59F4707CF2E3AE">Mikryukov, Vladimir</mods:namePart>
|
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<mods:nameIdentifier id="AE55EAF3DD0804DF974AD497EBF884EF" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
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<mods:affiliation id="46D9FD52DACBA873AC1C9381B8C199AB">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="BC82ADE42E291A65453158C2DAC8260D">text</mods:typeOfResource>
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<mods:titleInfo id="C3B086A87782A3D990C96E590A239C83">
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<mods:title id="B629C1CD0F20958D4D689F332E2D1DF6">MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part id="35A971AC4E3E1965B35F299E42B59E59">
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<mods:date id="6D5CA3E6E630429BE2B4E4C72944A4BF">2024</mods:date>
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<mods:detail id="EB5A2B544F4B5DE5D78643B6E91B104C" type="pubDate">
|
||||
<mods:number id="B919313DC0A067C40BE16227F79266D7">2024-08-09</mods:number>
|
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</mods:detail>
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<mods:detail id="9E993559EAD1B92474990B86C1E24EA7" type="volume">
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<mods:number id="90254865EA73B75CBC983308896D7074">107</mods:number>
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</mods:detail>
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<mods:extent id="A7C0356D49AB16FCD75B800FFAC1A545" unit="page">
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<mods:start id="5499FE0873E10AFFA0A9064CE6F281DB">249</mods:start>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
|
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<mods:classification id="619E8C509F12BFDF98A74F86386981F4">journal article</mods:classification>
|
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<mods:identifier id="AA4C13320E86631C630A24AF551A5A85" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
|
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</mods:mods>
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<treatment id="4E815FED51755ABFBDE7D2E8BCEEDB04" ID-arpha="4E815FED-5175-5ABF-BDE7-D2E8BCEEDB04" ID-mycobank="853612" LSID="urn:lsid:plazi:treatment:4E815FED51755ABFBDE7D2E8BCEEDB04" httpUri="http://treatment.plazi.org/id/4E815FED51755ABFBDE7D2E8BCEEDB04">
|
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<subSubSection id="82F3628E88AE45073CE534C0EC4D2732" type="nomenclature">
|
||||
<paragraph id="530E011C2FD95873535E0F11ACB61C72">
|
||||
<taxonomicName id="2B646DA5C044FE93D4221931B53EF938" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" kingdom="Fungi" order="Riederbergales" rank="order" status="ord. nov.">Riederbergales Tedersoo</taxonomicName>
|
||||
<taxonomicNameLabel id="B527D4150F18BF290166EFB2AC969987" rank="order">ord. nov.</taxonomicNameLabel>
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0E63BK" type="Type family">
|
||||
<paragraph id="E2770C08E1B9F07A1127E55E3EDAA9AB">
|
||||
<heading id="3AC938359F9D5802FC5EFEA720EE544D" reason="title">
|
||||
<typeStatus id="A18884EFF6E73DA2D3E848620EE0E30D">Type</typeStatus>
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||||
family.
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||||
</heading>
|
||||
</paragraph>
|
||||
<paragraph id="8C437D3936700BE34FDA37CDC0EFF7E1">
|
||||
<taxonomicName id="FAB6BABB0D5D8ABFFE066579017F4EDE" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" family="Riederbergaceae" rank="family" status="fam. nov.">Riederbergaceae Tedersoo</taxonomicName>
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||||
.
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||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0EK4BK" type="description">
|
||||
<paragraph id="D01D79D9EA3E7AC2E01CD6DCFC73DB3A">
|
||||
<heading id="1D521BA221DFC8B6CD89F10B2D25334B" reason="title">Description.</heading>
|
||||
</paragraph>
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||||
<paragraph id="1AE9B939C7EC1D8663C450051738A954">
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||||
Covers the monophyletic group in
|
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<taxonomicName id="AFAF4C5C9257EEDD9735833BBBC69A0C" class="Endogonomycetes" higherTaxonomySource="CoL,GBIF" kingdom="Fungi" phylum="Mucoromycota" rank="class">Endogonomycetes</taxonomicName>
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||||
(Fig.
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<figureCitation id="59BA18883DDC6E08EC17D98CC5A90C58" captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogenetic position of genera and genus-level groups of Endogonomycetes based on Maximum Likelihood analysis of SSU- 5.8 S-LSU sequences. The clades are collapsed, with the number of sequences included in parentheses. Question marks above branches indicate low ultra-rapid bootstrap support (< 95). Orders are highlighted in different colours. The uncollapsed phylogram is given in Suppl. material 3." figureDoi="10.3897/mycokeys.107.125549.figure2" httpUri="https://binary.pensoft.net/fig/1111389">2</figureCitation>
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||||
). Phylogenetically delimited as the least inclusive clade covering sequence accessions EUK 1602903, EUK 1603115, EUK 1602258, EUK 1602253, EUK 1602251 and EUK 1104709 (Suppl. material
|
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<xref id="C1C86AAE40B239E37E77E63CDE268DBD" ref-type="supplementary-material" rid="S3">3</xref>
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||||
).
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</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0E54BK" type="notes">
|
||||
<paragraph id="2C5D1FABF6A4C578F104520ADEBCFD74">
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||||
<heading id="234E4E68829F0FDDA28F5EB319E4ADC7" reason="title">Notes.</heading>
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||||
</paragraph>
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<paragraph id="9C30DE2FB881C38C20F9DA2535F06DE6">
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Recognised based on
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<abbrev id="ABBRID0EE5BK" xlink_title="environmental DNA">eDNA</abbrev>
|
||||
sequences only. Currently includes Riederbergaceae and four additional potentially family-level taxa represented by sequences EUK 1100540 (bog peat soil in Svartberget,
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<collectingCountry id="5F8A19C7CE254C9B870A6EF5D1C93876" name="Sweden">Sweden</collectingCountry>
|
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EQ5BK" specific-use="{"type":"Point","coordinates":[19.760000,64.240000]}">
|
||||
<geoCoordinate id="750AF7C3854EE6C312AD8C11CBB10980" degrees="64.24" direction="north" orientation="latitude" precision="555" value="64.24">64.24 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="23EA466EB6C6BF49600C60DB1C058DBE" degrees="19.76" direction="east" orientation="longitude" precision="555" value="19.76">19.76 ° E</geoCoordinate>
|
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</named-content>
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); EUK 1602254 (
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<abbrev id="ABBRID0EV5BK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="625C1EBF8A7FAC1B145F17ED036AEB6E" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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5826,
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<taxonomicName id="80674B612EE697F5D1358C6B27339F6A" class="Magnoliopsida" family="Rosaceae" genus="Malus" kingdom="Plantae" order="Rosales" phylum="Tracheophyta" rank="species" species="domestica">
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||||
<emphasis id="BA12B6DEA58D4ED49E3FD68FEC18047E" italics="true">Malus domestica</emphasis>
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</taxonomicName>
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orchard in Tabivere,
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<collectingCountry id="78D6A7F67A9A6B51EB3EB85274AEE913" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EH6BK" specific-use="{"type":"Point","coordinates":[26.615750,58.542860]}">
|
||||
<geoCoordinate id="DFE36B604370BEFC97A1A3D1CFEE62BC" degrees="58.54286" direction="north" orientation="latitude" precision="1" value="58.54286">58.54286 ° N</geoCoordinate>
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,
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<geoCoordinate id="D6A714360B68FFF396115A8362BAC940" degrees="26.61575" direction="east" orientation="longitude" precision="1" value="26.61575">26.61575 ° E</geoCoordinate>
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</named-content>
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); EUK 1602251, EUK 1602253 and EUK 1602257 (all
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<abbrev id="ABBRID0EM6BK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="65F1066E4BE9DDBEEF6DCAAFE9A478D5" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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5828,
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<collectingCountry id="3C820654B4BFE7D0F910CF3D7A1CC335" name="Estonia">Estonia</collectingCountry>
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,
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<taxonomicName id="5B27148DF0752D0C782DA82F25A5D911" class="Magnoliopsida" family="Rosaceae" genus="Malus" kingdom="Plantae" order="Rosales" phylum="Tracheophyta" rank="species" species="domestica">
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<emphasis id="02B90A61260209D1BA7CD24595F3056C" italics="true">Malus domestica</emphasis>
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</taxonomicName>
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orchard soil in Mooste,
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<collectingCountry id="C93AE5993A1C2BBF5A088637C9023C01" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EEACK" specific-use="{"type":"Point","coordinates":[27.196420,58.153350]}">
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<geoCoordinate id="C1FFA21AA88A7A1C9097227A183033FE" degrees="58.15335" direction="north" orientation="latitude" precision="1" value="58.15335">58.15335 ° N</geoCoordinate>
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,
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<geoCoordinate id="11ECF6DBCB42CA8CBA0D663DC80A3ABE" degrees="27.19642" direction="east" orientation="longitude" precision="1" value="27.19642">27.19642 ° E</geoCoordinate>
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</named-content>
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). Sequences EUK 0031975 (
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<abbrev id="ABBRID0EJACK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="1DBD988C71335C08CB8FD459A5EF7A4E" country="Sweden" lsid="urn:lsid:biocol.org:col:15668" name="Department of Botany, Swedish Museum of Natural History" type="Herbarium">S</collectionCode>
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1082,
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<taxonomicName id="F41E0003E80CCB0EEE3101301C868270" class="Pinopsida" family="Araucariaceae" genus="Araucaria" kingdom="Plantae" order="Pinales" phylum="Tracheophyta" rank="species" species="araucana">
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<emphasis id="A865B76E2A7B49C6EBB86CEFEF37CE4D" italics="true">Araucaria araucana</emphasis>
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</taxonomicName>
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forest, Nahuelbuta,
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<collectingCountry id="1B20C1284CFEAED0E541B5CEF69ADAC2" name="Chile">Chile</collectingCountry>
|
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0E2ACK" specific-use="{"type":"Point","coordinates":[73.003800,37.789850]}">
|
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-
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<geoCoordinate id="22DE061C74E812E18ECCF4FC54775705" degrees="37.78985" direction="north" orientation="latitude" precision="1" value="37.78985">37.78985 ° N</geoCoordinate>
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, -
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<geoCoordinate id="C4FD0E091ED32196BC90FB0FD0245B9C" degrees="73.0038" direction="east" orientation="longitude" precision="5" value="73.0038">73.0038 ° E</geoCoordinate>
|
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</named-content>
|
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) and EUK 1217433 (
|
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<abbrev id="ABBRID0EABCK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
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plot
|
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<collectionCode id="D2832C2BC8EB04643138662BE68AADB5" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
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4777, maritime grassland (saltmarsh) soil in Härs-hämani,
|
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<collectingCountry id="07068ECDC458827442A44B24F562266B" name="Estonia">Estonia</collectingCountry>
|
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,
|
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EHBCK" specific-use="{"type":"Point","coordinates":[23.927200,59.331030]}">
|
||||
<geoCoordinate id="638E3843DBEE03469DE6B13FD4C452E4" degrees="59.33103" direction="north" orientation="latitude" precision="1" value="59.33103">59.33103 ° N</geoCoordinate>
|
||||
,
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||||
<geoCoordinate id="FEDEB51621B6F54D2384EDEF3A8298BF" degrees="23.92720" direction="east" orientation="longitude" precision="1" value="23.9272">23.92720 ° E</geoCoordinate>
|
||||
</named-content>
|
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) represent additional, monospecific, potentially family-level groups not included in the phylograms due to the lack of
|
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<collectionCode id="0DE6C89371C45A2EA2DE87F3F9AAF3A7" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15590" lsid="urn:lsid:biocol.org:col:15590" name="Louisiana State University - Herbarium" type="Herbarium">LSU</collectionCode>
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sequences.
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</paragraph>
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</subSubSection>
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</treatment>
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</document>
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240
data/4E/91/B0/4E91B05A4FD25067B51FB76F2A2DE7F7.xml
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240
data/4E/91/B0/4E91B05A4FD25067B51FB76F2A2DE7F7.xml
Normal file
|
|
@ -0,0 +1,240 @@
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<document id="B414FF826CAECD3461241B41BE5E8B46" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="4E91B05A4FD25067B51FB76F2A2DE7F7" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Kungsaengena shadiae Tedersoo 2024, sp. nov." docType="treatment" docVersion="1" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723223268898" updateUser="pensoft">
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<mods:titleInfo id="4A48C1A125C0E38142B839D200A49910">
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<mods:title id="90F503EC52B3CCB12EB821B17CB90E7E">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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|
||||
<mods:namePart id="BA392C68D1561597F2CE4D3FACEF2685">Tedersoo, Leho</mods:namePart>
|
||||
<mods:affiliation id="506EC2B3F0E3153C6C7D479716D48B0E">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
|
||||
</mods:name>
|
||||
<mods:name id="09331DED4585099DFEDBCDBAAAFEBCF5" type="personal">
|
||||
<mods:role id="F8E1C89E300E6B55464DEB478429ED30">
|
||||
<mods:roleTerm id="6CDF24028C39D31DEF006A985E2664AA">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart id="C34950A3DF8E2C48A6AF279208F6702C">Magurno, Franco</mods:namePart>
|
||||
<mods:nameIdentifier id="98EB729299A888662B53C2B68BD61D8E" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
|
||||
<mods:affiliation id="9DF7638DDEC94BD132A359DCD5CA19ED">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
|
||||
</mods:name>
|
||||
<mods:name id="53101D9EC8EFFCEEABBC6857406F76EB" type="personal">
|
||||
<mods:role id="C9782912A6C59A530944B45D39191B2D">
|
||||
<mods:roleTerm id="428C20D28323FE2AD7EC3C001B9428AE">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart id="33D8F06E2B0C7F7EE2246817A903B19A">Alkahtani, Saad</mods:namePart>
|
||||
<mods:nameIdentifier id="C669C76FFB46B447875F67CF8CADAABA" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
|
||||
<mods:affiliation id="6131DDC7FA02F161BA3D7BD60FCE28AA">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
|
||||
</mods:name>
|
||||
<mods:name id="2F960D66243CE7CB4E772456749B9B6D" type="personal">
|
||||
<mods:role id="DE91F55361B388D5DC719929701EEA08">
|
||||
<mods:roleTerm id="FBDED2CA45B22D1785ACB001E1A40642">Author</mods:roleTerm>
|
||||
</mods:role>
|
||||
<mods:namePart id="7C397D449E0CD45852A7586D35CFCEAE">Mikryukov, Vladimir</mods:namePart>
|
||||
<mods:nameIdentifier id="EEA6FA73D4F336CEB7CB21F8DA90DB9B" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
|
||||
<mods:affiliation id="CC29EF7655974A430C75D4CDC895219B">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
|
||||
</mods:name>
|
||||
<mods:typeOfResource id="248CCCF676BAD021644C018D6DFC2AAA">text</mods:typeOfResource>
|
||||
<mods:relatedItem id="A203F3DEE99B7B66485D915635460535" type="host">
|
||||
<mods:titleInfo id="7ED138D74EEE3FFD42BCCB237AE3EE84">
|
||||
<mods:title id="91421CC85EBB670C0CA3F7FD02D92C49">MycoKeys</mods:title>
|
||||
</mods:titleInfo>
|
||||
<mods:part id="0399C900035E1620743ECBA6E7537F55">
|
||||
<mods:date id="A6C65DC9E305115DBCB6FBBB881C17B3">2024</mods:date>
|
||||
<mods:detail id="10026A811663A30C5019FB7B3A5EF8B4" type="pubDate">
|
||||
<mods:number id="DAB076853673BD2B182BA6A0571C49A3">2024-08-09</mods:number>
|
||||
</mods:detail>
|
||||
<mods:detail id="790B5A8C7E839BE7B85CC200CE3F2625" type="volume">
|
||||
<mods:number id="F797CA2D7AE66A1A304B9CEE93401F91">107</mods:number>
|
||||
</mods:detail>
|
||||
<mods:extent id="F852D5BEA000AB3623A1CA820FABC6B5" unit="page">
|
||||
<mods:start id="F4115CC7308E78362138DE3E471B43CE">249</mods:start>
|
||||
<mods:end id="81A261A60D5DEF83C8CE53C57F5F38BE">271</mods:end>
|
||||
</mods:extent>
|
||||
</mods:part>
|
||||
</mods:relatedItem>
|
||||
<mods:classification id="FB87EF3863CC91E59BA74D9B0EEFE7B4">journal article</mods:classification>
|
||||
<mods:identifier id="5E5EC98FB3D8A8E39A01A3076ADEDED2" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
|
||||
</mods:mods>
|
||||
<treatment id="4E91B05A4FD25067B51FB76F2A2DE7F7" ID-arpha="4E91B05A-4FD2-5067-B51F-B76F2A2DE7F7" ID-mycobank="853583" LSID="urn:lsid:plazi:treatment:4E91B05A4FD25067B51FB76F2A2DE7F7" httpUri="http://treatment.plazi.org/id/4E91B05A4FD25067B51FB76F2A2DE7F7">
|
||||
<subSubSection id="BEEE5E1084F5D3A1B48F8D0DFA18AF21" type="nomenclature">
|
||||
<paragraph id="29EACDEF408BADEE52488E27F6DA8113">
|
||||
<taxonomicName id="0EA39076C718BFE86FF09D06659BF80D" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" class="Magnoliopsida" family="Kungsaengenaceae" genus="Kungsaengena" kingdom="Fungi" order="Kungsaengenales" phylum="Tracheophyta" rank="species" species="shadiae" status="sp. nov.">
|
||||
<emphasis id="5A6FCB0B0E9DCEB928BA72C898973FFE" italics="true">Kungsaengena shadiae</emphasis>
|
||||
Tedersoo
|
||||
</taxonomicName>
|
||||
<taxonomicNameLabel id="5AD16B4FEFDBF1B5FBAB42082BB57853" rank="species">sp. nov.</taxonomicNameLabel>
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0EY3BI" type="diagnosis">
|
||||
<paragraph id="630EA3A7C8126C578F554F2F51F544D3">
|
||||
<heading id="C263B25DF7F8102A0B2C1467FF1AAD7B" reason="title">Diagnosis.</heading>
|
||||
</paragraph>
|
||||
<paragraph id="B1665B8396307A1699D39F349424D30D">
|
||||
separation from other species of
|
||||
<taxonomicName id="1ECA517AA264BC7BE181C76BE1263AC5" class="Magnoliopsida" family="Dipterocarpaceae" genus="Kungsaengena" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
|
||||
<emphasis id="224E96D2A405613B3B66E67E4F6E805A" italics="true">Kungsaengena</emphasis>
|
||||
</taxonomicName>
|
||||
based on the
|
||||
<abbrev id="ABBRID0EF4BI" xlink_title="internal transcribed spacer">
|
||||
<collectionCode id="17BD7FB7F095C794A9C989E387573904">ITS</collectionCode>
|
||||
</abbrev>
|
||||
region (
|
||||
<collectionCode id="686A95F36A6F4B29B25996F64D342317">ITS</collectionCode>
|
||||
2 positions 25–44 tgggaacccatttcgtcgga; one mismatch allowed) and
|
||||
<collectionCode id="56168728066093CCAC4E445F876B066D" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15590" lsid="urn:lsid:biocol.org:col:15590" name="Louisiana State University - Herbarium" type="Herbarium">LSU</collectionCode>
|
||||
(positions 665–694 cgttggggctgggacgcccgtcgctcgcac; one mismatch allowed) as indicated in Fig.
|
||||
<figureCitation id="66866D517C56561635D741BB283D56F7" captionStart="Figure 7" captionStartId="F7" captionText="Figure 7. Diagnostic barcodes for Kungsaengena shadiae relative to closely-related taxa in ITS 2 and LSU." figureDoi="10.3897/mycokeys.107.125549.figure7" httpUri="https://binary.pensoft.net/fig/1111394">7</figureCitation>
|
||||
.
|
||||
</paragraph>
|
||||
<caption id="E0DB5DE119E9E5A828D516F1BFFBC5C1" ID-DOI="10.3897/mycokeys.107.125549.figure7" ID-arpha="F98448CE-5B6C-5F97-8C36-6B08013F35FD" httpUri="https://binary.pensoft.net/fig/1111394" startId="F7">
|
||||
<paragraph id="2689A5309D8940B840550C64D2877F52">
|
||||
<label id="6FDBA814B81A90B01D896FD6B78106C1">Figure 7.</label>
|
||||
</paragraph>
|
||||
<paragraph id="84A6D6E69A3E531FA1937EFA7BF0BE56">
|
||||
Diagnostic barcodes for
|
||||
<taxonomicName id="4F304C8DB14F1EC51F3CB21D4EE14847" class="Magnoliopsida" family="Dipterocarpaceae" genus="Kungsaengena" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="species" species="shadiae">
|
||||
<emphasis id="A7AA22F632B2B7BD8E3908D00DF24E45" italics="true">Kungsaengena shadiae</emphasis>
|
||||
</taxonomicName>
|
||||
relative to closely-related taxa in ITS 2 and LSU.
|
||||
</paragraph>
|
||||
</caption>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0EF5BI" type="material">
|
||||
<paragraph id="C37B0CE2A7EB455AFD7F916166A862DC">
|
||||
<heading id="2C9472B92DAD316BFA6C5B9B76B140A1" reason="title">
|
||||
<typeStatus id="5D9D6DD40BE0D9F89125469C36C5C279">Type</typeStatus>
|
||||
.
|
||||
</heading>
|
||||
</paragraph>
|
||||
<paragraph id="5131572E32140B95B0E8CB97B70C6C73">
|
||||
<abbrev id="ABBRID0EL5BI" xlink_title="environmental DNA">eDNA</abbrev>
|
||||
sample TUE 128324 (
|
||||
<emphasis id="A5B2698DA21231E30D6E05F6D2347F2F" bold="true" italics="true">
|
||||
<typeStatus id="B587DC5505571DF1D7C5CB5089EA449C" type="holotype">holotype</typeStatus>
|
||||
</emphasis>
|
||||
);
|
||||
<abbrev id="ABBRID0ES5BI" xlink_title="environmental DNA">eDNA</abbrev>
|
||||
sequence EUK 1603402 (
|
||||
<emphasis id="CDEB75691384BD3B50A130859021CF37" bold="true" italics="true">
|
||||
<typeStatus id="27CAB84BC4617D7E3F95E26526D421D8" type="lectotype">lectotype</typeStatus>
|
||||
</emphasis>
|
||||
);
|
||||
<abbrev id="ABBRID0EZ5BI" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
||||
plot
|
||||
<collectionCode id="B6BDBF049494175514746E0645B3A533" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
||||
5763, wet grassland (soil sample TUE 028324) in Haage,
|
||||
<collectingCountry id="C695619EB59DE563D91786DEDED5181C" name="Estonia">Estonia</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0EA6BI" specific-use="{"type":"Point","coordinates":[26.612770,58.355550]}">
|
||||
<geoCoordinate id="EB3CF456D3B0142BF82616621B64052F" degrees="58.35555" direction="north" orientation="latitude" precision="1" value="58.35555">58.35555 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="C3BF4B42EBB9317DD723CDC6CFB1C77B" degrees="26.61277" direction="east" orientation="longitude" precision="1" value="26.61277">26.61277 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0EF6BI" type="description">
|
||||
<paragraph id="75CDAF8A59C343C022EA950E996B6BF8">
|
||||
<heading id="D555630CAEDFEC8934024395FFC2B38C" reason="title">Description.</heading>
|
||||
</paragraph>
|
||||
<paragraph id="3A0C6E9D22ECEF363676E49CFC2B494D">
|
||||
other sequences: EUK 1604022 (
|
||||
<abbrev id="ABBRID0EL6BI" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
||||
plot
|
||||
<collectionCode id="F973B2C393E82F6D49DB213504133CF1" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
||||
5906, football field soil in Karksi-Nuia,
|
||||
<collectingCountry id="B02456841F6E32EEF5A0042184187555" name="Estonia">Estonia</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0ES6BI" specific-use="{"type":"Point","coordinates":[25.559590,58.100880]}">
|
||||
<geoCoordinate id="39A1D080416041431163383D63543DDF" degrees="58.10088" direction="north" orientation="latitude" precision="1" value="58.10088">58.10088 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="CC88921F097331DA26CE6C07522E3F04" degrees="25.55959" direction="east" orientation="longitude" precision="1" value="25.55959">25.55959 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
); EUK 1604023 (
|
||||
<abbrev id="ABBRID0EX6BI" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
||||
plot
|
||||
<collectionCode id="042AAE629FB29E234CA991A60162C5A3" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
||||
5844, wet pasture soil in Tuhala,
|
||||
<collectingCountry id="7DA17979A6E93184B70D5298D96CBE8F" name="Estonia">Estonia</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0E56BI" specific-use="{"type":"Point","coordinates":[25.002830,59.230030]}">
|
||||
<geoCoordinate id="8E7C9273AFD956E56AFDF797BD4F52E5" degrees="59.23003" direction="north" orientation="latitude" precision="1" value="59.23003">59.23003 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="F1EE0DA743E3786103B6EC940B88E654" degrees="25.00283" direction="east" orientation="longitude" precision="1" value="25.00283">25.00283 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
); EUK 1604025 (
|
||||
<abbrev id="ABBRID0EDACI" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
|
||||
plot
|
||||
<collectionCode id="0FCE0C0686729E4E2B8ECB1FA4965BA1" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
|
||||
4444,
|
||||
<collectingCountry id="3C585DDBE963DD80E6A9751452C1E8AA" name="Estonia">Estonia</collectingCountry>
|
||||
, mixed forest soil in Altnurga,
|
||||
<collectingCountry id="14C9001A407D2D266DBBC4405275701F" name="Estonia">Estonia</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0EKACI" specific-use="{"type":"Point","coordinates":[26.283210,58.536760]}">
|
||||
<geoCoordinate id="ECD7B0EBA78DDCCF5C97E5342856886C" degrees="58.53676" direction="north" orientation="latitude" precision="1" value="58.53676">58.53676 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="B6212567788F91868E1664649B8777E0" degrees="26.28321" direction="east" orientation="longitude" precision="1" value="26.28321">26.28321 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
); and
|
||||
<ext-link id="D507E427532E0CC49048440C858CF294" ext-link-type="gen" xlink_href="OU942286" xlink_type="simple">
|
||||
<collectionCode id="AC822AA8DE25BB805C2F24A8761E24EB" country="New Zealand" name="Fossil Catalgoue in the Geology Museum">OU</collectionCode>
|
||||
942286
|
||||
</ext-link>
|
||||
(grassland soil in Kungsängen,
|
||||
<collectingCountry id="2AF34BC341B542A126E1B54745C9F906" name="Sweden">Sweden</collectingCountry>
|
||||
,
|
||||
<named-content content-type="dwc:verbatimCoordinates" id="NCID0EXACI" specific-use="{"type":"Point","coordinates":[17.661000,59.837000]}">
|
||||
<geoCoordinate id="9F4C806D177B09B7022D1AA54C6782F5" degrees="59.837" direction="north" orientation="latitude" precision="55" value="59.837">59.837 ° N</geoCoordinate>
|
||||
,
|
||||
<geoCoordinate id="AB160248565E2F429264F78AB2F13A63" degrees="17.661" direction="east" orientation="longitude" precision="55" value="17.661">17.661 ° E</geoCoordinate>
|
||||
</named-content>
|
||||
), isolated by Shadi Eshghi Sahraei (
|
||||
<bibRefCitation id="131748C3D7BB144FE27BC325CBC004CA" DOI="10.1002/ece3.8676" author="Eshghi Sahraei" etAl="et al." firstAuthor="Eshghi Sahraei" refId="B25" refString="Eshghi Sahraei S, Furneaux B, Kluting K, Zakieh M, Rydin H, Hytteborn H, Rosling A (2022) Effects of operational taxonomic unit inference methods on soil microeukaryote community analysis using long-read metabarcoding. Ecology and Evolution 12 (3): e 8676. https://doi.org/10.1002/ece3.8676" year="2022">Eshghi Sahraei et al. 2022</bibRefCitation>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0EGBCI" type="etymology">
|
||||
<paragraph id="BA169EC58D4F3E8C5D999E4C542DDA74">
|
||||
<heading id="E2EF222D3E27741563A01628079A69AB" reason="title">Etymology.</heading>
|
||||
</paragraph>
|
||||
<paragraph id="6007D282F4BDEF5950E965942FD4DD3E">
|
||||
<emphasis id="8FB715DC62DCF447694A4AD6DC11E4D7" italics="true">Kungsängen</emphasis>
|
||||
(Swedish) refers to
|
||||
<typeStatus id="9545D89A643A8C7DC77F606000BEAEC1">type</typeStatus>
|
||||
locality; and
|
||||
<emphasis id="2166DCE4661D73871EE6AAECF4A16DFC" italics="true">Shadi</emphasis>
|
||||
(Persian) refers to the first name of Shadi Eshghi Sahraei who analysed materials collected from the
|
||||
<typeStatus id="309B8C6616EFB130C9CEC9CFAD985C61">type</typeStatus>
|
||||
locality.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection id="SECID0E2BCI" type="notes">
|
||||
<paragraph id="9B704600660BE315AF253656CC1D62D5">
|
||||
<heading id="746526BA2E37FA9654B2C7301E4A7111" reason="title">Notes.</heading>
|
||||
</paragraph>
|
||||
<paragraph id="6DB550A50D69C01499DA53F233C52AF1">
|
||||
Found from the Baltic States and
|
||||
<collectingCountry id="5E5BD4B8D47AC0680ABCE3D9ACC4D36C" name="Sweden">Sweden</collectingCountry>
|
||||
, with
|
||||
<abbrev id="ABBRID0EBCCI" xlink_title="internal transcribed spacer">
|
||||
<collectionCode id="1C3D15BB526E4D38CC2478495DEE0251">ITS</collectionCode>
|
||||
</abbrev>
|
||||
and
|
||||
<collectionCode id="B30D814A582A0C4CADD20D985E732F96" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15590" lsid="urn:lsid:biocol.org:col:15590" name="Louisiana State University - Herbarium" type="Herbarium">LSU</collectionCode>
|
||||
sequences differing up to 15 % and 1 %, respectively. The
|
||||
<abbrev id="ABBRID0EFCCI" xlink_title="internal transcribed spacer">
|
||||
<collectionCode id="9A56E3A159A08A013FB4AC3A9573A86F">ITS</collectionCode>
|
||||
</abbrev>
|
||||
region is infested with microsatellite-like regions and homopolymers, and many sequence variants have long deletions in multiple positions.
|
||||
<taxonomicName id="78811596C612EBE9D308D27C76B7791C" class="Magnoliopsida" family="Dipterocarpaceae" genus="Kungsaengena" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="species" species="shadiae">
|
||||
<emphasis id="7137B8718D69F5C429127A918AE712C3" italics="true">K. shadiae</emphasis>
|
||||
</taxonomicName>
|
||||
seems to be generalist in terms of habitat
|
||||
<typeStatus id="AAECD2654AC276D876A388CF4AB08FE4">type</typeStatus>
|
||||
.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
</treatment>
|
||||
</document>
|
||||
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Add table
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Reference in a new issue