Add updates up until 2024-08-09 17:10:58
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data/12/C8/B8/12C8B80814E05604BAF230B66BF99003.xml
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<document id="A217B79CB05FBE2EA57DF6E8EBD6C560" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="12C8B80814E05604BAF230B66BF99003" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Ruua Tedersoo 2024, gen. nov." docType="treatment" docVersion="1" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723223268898" updateUser="pensoft">
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<mods:mods id="9029A60CE5EA2ADC2094FC151D883B4F" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="6CE095CBBB96A41D521AECD66C816E96">
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<mods:title id="F2C22A247E2881D815102EEDF190167D">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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</mods:titleInfo>
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<mods:name id="208C940AE43CB42FAB228BDC7CE2FEF9" type="personal">
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<mods:role id="38DC5119A5C9EA3B1C5BA7C18B9EE04F">
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<mods:roleTerm id="721BFE3F7D553A227AD9C70D47D18FAB">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="335D879911F12B57D6A1F3E09A7E55C0">Tedersoo, Leho</mods:namePart>
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<mods:affiliation id="F3FADF5E447A7E3D3B2F37E4C6D3169B">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="F5080DE17DB78E7B05528BE91CD35C44" type="personal">
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<mods:role id="1513DD00E650B7AF3D7752B110FB43E1">
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<mods:roleTerm id="EF999996E4B7B6606780B0986DB0C35B">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="533E65B9D87B994F66ADD60F627DBBCD">Magurno, Franco</mods:namePart>
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<mods:nameIdentifier id="DABD5EE2CDA37986A9525F1FEC69D345" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
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<mods:affiliation id="1DFC6B3FCE02D9CECD513E5B71F81E88">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
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</mods:name>
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<mods:name id="81DBD9D889B6406A538B4600749339E6" type="personal">
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<mods:role id="268E21454B23583BC5D8462EE8718E67">
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<mods:roleTerm id="D5AFF1138E2FA8A8E821E3681B3C26BF">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="1A547A251D9FBDFB2AB2BCDD1106A5DE">Alkahtani, Saad</mods:namePart>
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<mods:nameIdentifier id="DEBE4AA34CB16DFE98EC3613E654A715" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
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<mods:affiliation id="04905A4ABE7BBF1AECDC3BFF154C0E13">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="6D95EC352F9BDA324569A9AF734B933A" type="personal">
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<mods:roleTerm id="A5E87F8A9F5A3CDCAC8C27C9C1E59DF5">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="C4773841BC62B7ABC58D8F6ADAFA72CB">Mikryukov, Vladimir</mods:namePart>
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<mods:nameIdentifier id="C17BD42435A92C18FFB1763898415718" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
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<mods:affiliation id="A026BAB4BBD98CF5005291F87D57B35A">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="A7E5774683C18F1843924C0E350E3230">text</mods:typeOfResource>
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<mods:relatedItem id="251843E2C4331EB54E208DA8DF05EE63" type="host">
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<mods:titleInfo id="38247B2A108CB3992C5CC6104500E25C">
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<mods:title id="FC55089429D948E883EA25920680C5C3">MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part id="6105C68873B9EF4161D823AE506F9C4E">
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<mods:date id="09095A3AF5722A673CE7CB7BE5DDD702">2024</mods:date>
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<mods:detail id="65608553B2D28DDB589FF581162C0F66" type="pubDate">
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<mods:number id="098C15AD33D855F6D3338A6CBC1B1268">2024-08-09</mods:number>
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</mods:detail>
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<mods:detail id="E92E93C945420D7D2D6B264D889026FA" type="volume">
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<mods:number id="C7BA90BC5772A9BB090BF85FAB243AAC">107</mods:number>
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</mods:detail>
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<mods:extent id="A466FCBA644CE9902F79878561B4E4BA" unit="page">
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<mods:start id="55A23F7BF0052E15AF9517E1178BFE58">249</mods:start>
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||||
<mods:end id="D8BDE41D8BF875B406FFCA5583E9E540">271</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification id="138B8A523E019CD9D84432BEA6F45BBE">journal article</mods:classification>
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<mods:identifier id="E72E76E151F88998A4B40E339B5B5FBE" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
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</mods:mods>
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<treatment id="12C8B80814E05604BAF230B66BF99003" ID-arpha="12C8B808-14E0-5604-BAF2-30B66BF99003" ID-mycobank="853618" LSID="urn:lsid:plazi:treatment:12C8B80814E05604BAF230B66BF99003" httpUri="http://treatment.plazi.org/id/12C8B80814E05604BAF230B66BF99003">
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<subSubSection id="237B38F056DC2404806A067633AE00CB" type="nomenclature">
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<paragraph id="219B9839F5F0BC3D0EBEF234790CC2F8">
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<taxonomicName id="0C5F51CC4F72B45E410073A411468A96" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" class="Magnoliopsida" family="Ruuaceae" genus="Ruua" kingdom="Fungi" order="Ruuales" phylum="Tracheophyta" rank="genus" status="gen. nov.">
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<emphasis id="2ADC9E94E7736E7FCA2ECE008A047061" italics="true">Ruua</emphasis>
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Tedersoo
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</taxonomicName>
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<taxonomicNameLabel id="2B9449C30748B084332F3775EF1BED4C" rank="genus">gen. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EWWCK" type="type species">
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<paragraph id="945E7298ABB6E82E296534C972E251E4">
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<heading id="2595739787AB6E8ACE2FCDD4152797F1" reason="title">
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<typeStatus id="7239EBAEE562F1AD15C8E071C7EA7DA9">Type</typeStatus>
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species.
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</heading>
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</paragraph>
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<paragraph id="AF9C465A5F5E9405B2CEEB87F88DD862">
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<taxonomicName id="22E113A674FCBD3DEC623554B7E9523A" authority="Tedersoo." authorityName="Tedersoo." class="Magnoliopsida" family="Dipterocarpaceae" genus="Ruua" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="species" species="coralieae">
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<emphasis id="0360068FCC2BF3605A00EE312CA47806" italics="true">Ruua coralieae</emphasis>
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Tedersoo.
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</taxonomicName>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EHXCK" type="description">
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<paragraph id="B99C850DB1E2E5B53637250B87BB1A81">
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<heading id="BD34223C023D6E476C2444739A868453" reason="title">Description.</heading>
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</paragraph>
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<paragraph id="FB498B4DFBF3A9D42D3B9F731FEBB632">
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Covers the monophyletic group in
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<tp_taxon-name id="E05D45E9856FCC4DCCD8864FC658E811">
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<tp_taxon-name-part id="8167207A4DCC14722C31FCB24058F17F" taxon-name-part-type="family">Ruuaceae</tp_taxon-name-part>
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</tp_taxon-name>
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(Fig.
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<figureCitation id="E016C80019EE8DC5E7B7FBBA3C402ED2" captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogenetic position of genera and genus-level groups of Endogonomycetes based on Maximum Likelihood analysis of SSU- 5.8 S-LSU sequences. The clades are collapsed, with the number of sequences included in parentheses. Question marks above branches indicate low ultra-rapid bootstrap support (< 95). Orders are highlighted in different colours. The uncollapsed phylogram is given in Suppl. material 3." figureDoi="10.3897/mycokeys.107.125549.figure2" httpUri="https://binary.pensoft.net/fig/1111389">2</figureCitation>
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). Phylogenetically delimited as the least inclusive clade covering sequence accessions EUK 1603424, EUK 1600239, EUK 1600169 and EUK 1600180 (Suppl. material
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<xref id="EDD9260C3ED6DC47D2B0D21FCCC8D663" ref-type="supplementary-material" rid="S3">3</xref>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0E1XCK" type="notes">
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<paragraph id="B3A37E46B2C5E31A5939B3AE19D94196">
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<heading id="2F979E889126E2ADA20C5DE5C54FCFAF" reason="title">Notes.</heading>
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</paragraph>
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<paragraph id="86ACACCB3886CDC2CBCFDF6DF6FAEBE5">
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Based on
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<abbrev id="ABBRID0EAYCK" xlink_title="internal transcribed spacer">
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<collectionCode id="DEE989C1CA61C4DF95641329D8A30F5A">ITS</collectionCode>
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</abbrev>
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and
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<collectionCode id="35E4FF3270845311CC97B0D45197D69A" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15590" lsid="urn:lsid:biocol.org:col:15590" name="Louisiana State University - Herbarium" type="Herbarium">LSU</collectionCode>
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sequences,
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<taxonomicName id="1EF34887A10E77A76A39CD3C446AD6B4" class="Magnoliopsida" family="Dipterocarpaceae" genus="Ruua" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
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<emphasis id="BE748DC6A104B6C0FB702BC9AD4951B6" italics="true">Ruua</emphasis>
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</taxonomicName>
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is comprised of 3–4 potential species that are represented by sequences EUK 1632165 (
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<abbrev id="ABBRID0ELYCK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="546119E7B506BE18EC09332FB2D0551A" country="Sweden" lsid="urn:lsid:biocol.org:col:15668" name="Department of Botany, Swedish Museum of Natural History" type="Herbarium">S</collectionCode>
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510, village habitat soil in Kihnu,
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<collectingCountry id="769950A4CEC844A1B5F4E46196799AA0" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0ESYCK" specific-use="{"type":"Point","coordinates":[23.981500,58.128200]}">
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<geoCoordinate id="76E036D69E9C7BCEC231BB1C9FC9A89B" degrees="58.1282" direction="north" orientation="latitude" precision="5" value="58.1282">58.1282 ° N</geoCoordinate>
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,
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<geoCoordinate id="F569D5C1485D4740C4428497F8A6FF97" degrees="23.9815" direction="east" orientation="longitude" precision="5" value="23.9815">23.9815 ° E</geoCoordinate>
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</named-content>
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); EUK 1603289 (
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<abbrev id="ABBRID0EXYCK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="B33CB84787CEA674F5041D3E32F73810" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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4450,
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<emphasis id="F96F7A9992A17BE15C87052A42B79197" italics="true">
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<taxonomicName id="68AA2E207C1C03D7E42C83B895394ADE" class="Magnoliopsida" family="Oleaceae" genus="Fraxinus" kingdom="Plantae" order="Lamiales" phylum="Tracheophyta" rank="genus">Fraxinus</taxonomicName>
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-
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<taxonomicName id="F7788F345E55003B1E73F62E4DED4284" class="Magnoliopsida" family="Malvaceae" genus="Tilia" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">Tilia</taxonomicName>
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</emphasis>
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forest soil in Nigula,
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<collectingCountry id="825F6C465EDA0276985107D8E953AB74" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EFZCK" specific-use="{"type":"Point","coordinates":[24.680300,58.019000]}">
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<geoCoordinate id="23F5042BAA3DFF643720EAC8702B38A0" degrees="58.0190" direction="north" orientation="latitude" precision="5" value="58.019">58.0190 ° N</geoCoordinate>
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,
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<geoCoordinate id="F3B75F40A2ED8EA2FBF5B1266E46BEA3" degrees="24.6803" direction="east" orientation="longitude" precision="5" value="24.6803">24.6803 ° E</geoCoordinate>
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</named-content>
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); EUK 1103406 (freshwater in Skogaryd,
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<collectingCountry id="D3A0DF018AF03737A298481C7F60761F" name="Sweden">Sweden</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0ENZCK" specific-use="{"type":"Point","coordinates":[12.160000,58.370000]}">
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<geoCoordinate id="3B521082AF6443DED0952231E1C99025" degrees="58.37" direction="north" orientation="latitude" precision="555" value="58.37">58.37 ° N</geoCoordinate>
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,
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<geoCoordinate id="F57EB41D2C2F9532F70A0407253D243A" degrees="12.16" direction="east" orientation="longitude" precision="555" value="12.16">12.16 ° E</geoCoordinate>
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</named-content>
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); and
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<ext-link id="CD46B628E12FA2B87FE6BCD674E77BD7" ext-link-type="gen" xlink_href="FN610984" xlink_type="simple">FN 610984</ext-link>
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(
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<taxonomicName id="FB3088C395961C2C2D8E40444D2FEFDB" class="Magnoliopsida" family="Fagaceae" genus="Fagus" kingdom="Plantae" order="Fagales" phylum="Tracheophyta" rank="species" species="sylvatica">
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<emphasis id="4E39721144AF0CF8ACC971DC3702ADBA" italics="true">Fagus sylvatica</emphasis>
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</taxonomicName>
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forest soil in Breuil-Chenue,
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<collectingCountry id="CC531350C084D6973354DBD2770A08AC" name="France">France</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EF1CK" specific-use="{"type":"Point","coordinates":[4.076000,47.301000]}">
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<geoCoordinate id="4629D7B364C8B2903C2E0BC89F796E2C" degrees="47.301" direction="north" orientation="latitude" precision="55" value="47.301">47.301 ° N</geoCoordinate>
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,
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<geoCoordinate id="AB97ACB6C95DB829E331BD6AE835B161" degrees="4.076" direction="east" orientation="longitude" precision="55" value="4.076">4.076 ° E</geoCoordinate>
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</named-content>
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), isolated by Coralie Damon (
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<bibRefCitation id="141F9E931510AACA7DD4544E6E041112" DOI="10.1111/j.1574-6941.2010.00983.x" author="Damon" etAl="et al." firstAuthor="Damon" issue="3" journalOrPublisher="FEMS Microbiology Ecology" pagination="693-705" refId="B18" refString="Damon C, Barroso G, Férandon C, Ranger J, Fraissinet-Tachet L, Marmeisse R (2010) Performance of the COX 1 gene as a marker for the study of metabolically active Pezizomycotina and Agaricomycetes fungal communities from the analysis of soil RNA. FEMS Microbiology Ecology 74 (3): 693–705. https://doi.org/10.1111/j.1574-6941.2010.00983.x" title="Performance of the COX 1 gene as a marker for the study of metabolically active Pezizomycotina and Agaricomycetes fungal communities from the analysis of soil RNA." volume="74" year="2010">Damon et al. 2010</bibRefCitation>
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).
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</paragraph>
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</subSubSection>
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</treatment>
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</document>
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