treatments-xml/data/9E/4C/FC/9E4CFC6FFFA6FF848054CB1BBF007A9C.xml

<document id="AE48C8D9EF04DC0A0C95B362A235ED6D" ID-CLB-Dataset="20554" ID-DOI="10.1099/ijsem.0.001720" ID-GBIF-Dataset="b06ff60a-17b8-4ac9-84b8-bc63f2963e86" ID-ISSN="1466-5034" ID-Zenodo-Dep="6223652" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1645465464274" checkinUser="felipe" docAuthor="Siddiqi, Muhammad Zubair, Aslam, Zubair &amp; Im, Wan-Taek" docDate="2017" docId="9E4CFC6FFFA6FF848054CB1BBF007A9C" docLanguage="en" docName="IntJSystEvolMicrobiol.67.4.1005-1010.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 67 (4)" docSource="http://dx.doi.org/10.1099/ijsem.0.001720" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Arachidicoccus ginsenosidivorans Siddiqi &amp; Aslam &amp; Im 2017, SP. NOV." docType="treatment" docVersion="9" lastPageNumber="1009" masterDocId="62758417FFA5FF80836FCD51BB177B4F" masterDocTitle="Arachidicoccus ginsenosidivorans sp. nov., with ginsenosideconverting activity isolated from ginseng cultivating soil" masterLastPageNumber="1010" masterPageNumber="1005" pageNumber="1008" updateTime="1699315124295" updateUser="ExternalLinkService">
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<mods:title id="65062B20639CE5CBDCFEC2C5E6E757EF">Arachidicoccus ginsenosidivorans sp. nov., with ginsenosideconverting activity isolated from ginseng cultivating soil</mods:title>
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<mods:namePart id="C4B1C20ECBE7BD38B8EA106B28D41220">Siddiqi, Muhammad Zubair</mods:namePart>
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<mods:namePart id="F6BF6D7D820313C5C42C6538AAC29FD3">Aslam, Zubair</mods:namePart>
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<mods:namePart id="FE97623AA081C711FB626E111D4D73C0">Im, Wan-Taek</mods:namePart>
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<mods:title id="26C981898FD39D8EA1061BB4EC8DF679">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<treatment id="9E4CFC6FFFA6FF848054CB1BBF007A9C" ID-DOI="http://doi.org/10.5281/zenodo.6314451" ID-GBIF-Taxon="193422649" ID-Zenodo-Dep="6314451" LSID="urn:lsid:plazi:treatment:9E4CFC6FFFA6FF848054CB1BBF007A9C" httpUri="http://treatment.plazi.org/id/9E4CFC6FFFA6FF848054CB1BBF007A9C" lastPageId="4" lastPageNumber="1009" pageId="3" pageNumber="1008">
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<paragraph id="165A4D79FFA6FF838054CB1BBFF67DC3" blockId="3.[827,1465,1610,1949]" pageId="3" pageNumber="1008">
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DESCRIPTION OF 
<taxonomicName id="D1E536FAFFA6FF83875FCB1BBF4B7DC3" authority="Siddiqi &amp; Aslam &amp; Im, 2017" authorityName="Siddiqi &amp; Aslam &amp; Im" authorityYear="2017" class="Chitinophagia" family="Chitinophagaceae" genus="Arachidicoccus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Chitinophagales" pageId="3" pageNumber="1008" phylum="Bacteroidetes" rank="species" species="ginsenosidivorans" status="sp. nov.">
<emphasis id="2491916BFFA6FF83875FCB1BBF4B7DC3" bold="true" italics="true" pageId="3" pageNumber="1008">ARACHIDICOCCUS GINSENOSIDIVORANS</emphasis>
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<taxonomicNameLabel id="3FA22C10FFA6FF83870ACB3EBFF67DC3" box="[1125,1249,1647,1676]" pageId="3" pageNumber="1008" rank="species">SP. NOV.</taxonomicNameLabel>
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<subSubSection id="5EFF1EF2FFA6FF838054CBCAB8A17C5F" pageId="3" pageNumber="1008" type="etymology">
<paragraph id="165A4D79FFA6FF838054CBCAB8A17C5F" blockId="3.[827,1465,1610,1949]" pageId="3" pageNumber="1008">
<taxonomicName id="D1E536FAFFA6FF838054CBCABF8D7DFC" authorityName="Siddiqi &amp; Aslam &amp; Im" authorityYear="2017" box="[827,1178,1691,1715]" class="Chitinophagia" family="Chitinophagaceae" genus="Arachidicoccus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Chitinophagales" pageId="3" pageNumber="1008" phylum="Bacteroidetes" rank="species" species="ginsenosidivorans">
<emphasis id="2491916BFFA6FF838054CBCABF8D7DFC" box="[827,1178,1691,1715]" italics="true" pageId="3" pageNumber="1008">Arachidicoccus ginsenosidivorans</emphasis>
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(gin.se.no.si.di.vo′ rans. N. L. n. 
<emphasis id="2491916BFFA6FF838018CBEBBF117D9D" box="[887,1030,1722,1746]" italics="true" pageId="3" pageNumber="1008">ginsenosidum</emphasis>
ginsenoside; L. part. adj. 
<emphasis id="2491916BFFA6FF83864CCBEABE7E7D9D" box="[1315,1385,1723,1746]" italics="true" pageId="3" pageNumber="1008">vorans</emphasis>
eating, devouring; N.L. part. adj. 
<taxonomicName id="D1E536FAFFA6FF838703CB88BE327DBE" authorityName="Siddiqi &amp; Aslam &amp; Im" authorityYear="2017" box="[1132,1317,1753,1777]" class="Chitinophagia" family="Chitinophagaceae" genus="Arachidicoccus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Chitinophagales" pageId="3" pageNumber="1008" phylum="Bacteroidetes" rank="species" species="ginsenosidivorans">
<emphasis id="2491916BFFA6FF838703CB88BE327DBE" box="[1132,1317,1753,1777]" italics="true" pageId="3" pageNumber="1008">ginsenosidivorans</emphasis>
</taxonomicName>
ginsenosidedevouring).
</paragraph>
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<paragraph id="165A4D79FFA6FF848054CA77BFB07A65" blockId="3.[827,1465,1610,1949]" lastBlockId="4.[827,1465,182,467]" lastPageId="4" lastPageNumber="1009" pageId="3" pageNumber="1008">
Cells are Gram-reaction-negative, aerobic, non-motile and rod shaped (width, 0.4–1 µm; length, 1.5–3 µm). Colonies grown at 30 
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C on nutrient agar for 2 days are light yellow, smooth, convex, opaque, circular with regular margins, and 
<quantity id="D11DE09CFFA1FF848316C9EFBBF57F9A" box="[121,226,1213,1238]" metricMagnitude="-3" metricUnit="m" metricValue="2.75" metricValueMax="3.5" metricValueMin="2.0" pageId="4" pageNumber="1009" unit="mm" value="2.75" valueMax="3.5" valueMin="2.0">2–3.5 mm</quantity>
in diameter. Growth occurs at 10–37 
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C and pH 5–7 with 0–4 % NaCl (w/v). Optimum growth occurs at 30 
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C and pH 7.0 with 0–1 % NaCl (w/v). Indole production is negative. In the API kits (API 20 NE, 32 GN and API ZYM), positive for the reduction of nitrate, and alkaline phosphatase, esterase, leucine arylamidase, valine arylamidase, cystine arylamidase, acid phosphatase, napthol-AS-BI-phosphohydrolase, a- galactosidase, b- galactosidase, a- glucosidase, 
<emphasis id="2491916BFFA1FF8482A3C8E7BAC87E82" box="[460,479,1462,1485]" italics="true" pageId="4" pageNumber="1009">N</emphasis>
-acetyl-b- glucosaminidase and a 
<emphasis id="2491916BFFA1FF8483A4C884BBC37EA3" box="[203,212,1493,1516]" italics="true" pageId="4" pageNumber="1009">-</emphasis>
fucosidase activties. 
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Rhamnose, sucrose, 
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arabinose and melibiose are utilized. Negative for lipase, trypsin, b- glucuronidase, a- mannosidase, L- tryptophan, urease and gelatin hydrolysis. Does not utilize maltose, 
<subScript id="8A614F3CFFA1FF8481B0CB66B9E17D07" attach="right" box="[735,758,1585,1608]" fontSize="7" pageId="4" pageNumber="1009">D-</subScript>
ribose, inositol, itaconic acid, suberic acid, sodium malonate, sodium acetate, lactic acid, L- alanine, potassium 5-ketogluconate, glycogen, 3-hydroxybenzoic acid, L- serine, D- mannitol, capric acid, valeric acid, trisodium citrate, potassium 2-ketogluconate, 3-hydroxybutyric acid, 4- hydroxybenzoic acid, potassium gluconate, adipic acid, malic acid and phenylacetic acid. MK-7 is the predominant respiratory quinone and iso-C 
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, iso-C 
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G, iso-C 
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3- OH and summed feature 3 (comprising iso-C 
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7 
<emphasis id="2491916BFFA1FF8481DCCA19B9AA7C10" box="[691,701,1864,1887]" italics="true" pageId="4" pageNumber="1009">c</emphasis>
and/ or C 
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<emphasis id="2491916BFFA1FF8483BBCA3DBBF37C31" box="[212,228,1900,1918]" italics="true" pageId="4" pageNumber="1009">Ɯ</emphasis>
6 
<emphasis id="2491916BFFA1FF84839ECA36BBEC7C31" box="[241,251,1895,1918]" italics="true" pageId="4" pageNumber="1009">c</emphasis>
) are the major cellular fatty acids. The polar lipid profile is composed of PE, six unknown polar lipids (L1–L6) and an unknown aminolipid. TLC analysis shows that the 
<typeStatus id="C95EF3DBFFA1FF8480F6CD84B8D17BA2" box="[921,966,213,237]" pageId="4" pageNumber="1009">type</typeStatus>
strain Gsoil 809 
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converts major ginsenoside Rg1 (PPT-type) to minor ginsenoside Rh1, while the ginsenoside Re is not changed (Fig. S5).
</paragraph>
</subSubSection>
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<emphasis id="2491916BFFA1FF848316CDE7BBD27B86" bold="true" box="[121,197,182,201]" pageId="4" pageNumber="1009">Table 2.</emphasis>
Cellular fatty acid contents (%) of strain Gsoil 809T and the type strain of the phylogenetically related species of the genus 
<emphasis id="2491916BFFA1FF848316CDBABBEC7BB1" box="[121,251,235,254]" italics="true" pageId="4" pageNumber="1009">Arachidicoccus</emphasis>
Strain: 1, Gsoil 809T; 2, 
<emphasis id="2491916BFFA1FF848230CC43BAE37A6A" box="[351,500,274,293]" italics="true" pageId="4" pageNumber="1009">A. rhizosphaerae</emphasis>
KCTC 22378T. Both strains were cultured on nutrient agar for 48 h at 30 Ǫ C. Results are presented as percentages of the total fatty acids. 
<emphasis id="2491916BFFA1FF8482B7CC16BAF47A15" box="[472,483,327,346]" italics="true" pageId="4" pageNumber="1009">–</emphasis>
, Not detected.
</paragraph>
</caption>
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strain, isolated from ginseng cultivating soil, 
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, is 
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809 
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(= 
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= 
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30984 
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). 
<collectorName id="BB1028AFFFA1FF8480F2CC2FB8F67AD9" box="[925,993,382,406]" pageId="4" pageNumber="1009">The G</collectorName>
+C content of the genomic DNA of the type strain is 39.4 mol%. 
<collectorName id="BB1028AFFFA1FF848771CCCDBF507AFB" box="[1054,1095,412,436]" pageId="4" pageNumber="1009">The</collectorName>
polyamines are homospermidine and methylbenzoate.
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</paragraph>
</subSubSection>
</treatment>
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