Arachidicoccus ginsenosidivorans sp. nov., with ginsenosideconverting activity isolated from ginseng cultivating soil
Author
Siddiqi, Muhammad Zubair
Author
Aslam, Zubair
Author
Im, Wan-Taek
text
International Journal of Systematic and Evolutionary Microbiology
2017
2017-04-01
67
4
1005
1010
http://dx.doi.org/10.1099/ijsem.0.001720
journal article
20554
10.1099/ijsem.0.001720
b06ff60a-17b8-4ac9-84b8-bc63f2963e86
1466-5034
6223652
DESCRIPTION OF
ARACHIDICOCCUS GINSENOSIDIVORANS
SP. NOV.
Arachidicoccus ginsenosidivorans
(gin.se.no.si.di.vo′ rans. N. L. n.
ginsenosidum
ginsenoside; L. part. adj.
vorans
eating, devouring; N.L. part. adj.
ginsenosidivorans
ginsenosidedevouring).
Cells are Gram-reaction-negative, aerobic, non-motile and rod shaped (width, 0.4–1 µm; length, 1.5–3 µm). Colonies grown at 30
Ǫ
C on nutrient agar for 2 days are light yellow, smooth, convex, opaque, circular with regular margins, and
2–3.5 mm
in diameter. Growth occurs at 10–37
Ǫ
C and pH 5–7 with 0–4 % NaCl (w/v). Optimum growth occurs at 30
Ǫ
C and pH 7.0 with 0–1 % NaCl (w/v). Indole production is negative. In the API kits (API 20 NE, 32 GN and API ZYM), positive for the reduction of nitrate, and alkaline phosphatase, esterase, leucine arylamidase, valine arylamidase, cystine arylamidase, acid phosphatase, napthol-AS-BI-phosphohydrolase, a- galactosidase, b- galactosidase, a- glucosidase,
N
-acetyl-b- glucosaminidase and a
-
fucosidase activties.
L-
Rhamnose, sucrose,
L-
arabinose and melibiose are utilized. Negative for lipase, trypsin, b- glucuronidase, a- mannosidase, L- tryptophan, urease and gelatin hydrolysis. Does not utilize maltose,
D-
ribose, inositol, itaconic acid, suberic acid, sodium malonate, sodium acetate, lactic acid, L- alanine, potassium 5-ketogluconate, glycogen, 3-hydroxybenzoic acid, L- serine, D- mannitol, capric acid, valeric acid, trisodium citrate, potassium 2-ketogluconate, 3-hydroxybutyric acid, 4- hydroxybenzoic acid, potassium gluconate, adipic acid, malic acid and phenylacetic acid. MK-7 is the predominant respiratory quinone and iso-C
15: 0
, iso-C
15: 1
G, iso-C
17: 0
3- OH and summed feature 3 (comprising iso-C
16: 1
Ɯ
7
c
and/ or C
16: 1
Ɯ
6
c
) are the major cellular fatty acids. The polar lipid profile is composed of PE, six unknown polar lipids (L1–L6) and an unknown aminolipid. TLC analysis shows that the
type
strain Gsoil 809
T
converts major ginsenoside Rg1 (PPT-type) to minor ginsenoside Rh1, while the ginsenoside Re is not changed (Fig. S5).
Table 2.
Cellular fatty acid contents (%) of strain Gsoil 809T and the type strain of the phylogenetically related species of the genus
Arachidicoccus
Strain: 1, Gsoil 809T; 2,
A. rhizosphaerae
KCTC 22378T. Both strains were cultured on nutrient agar for 48 h at 30 Ǫ C. Results are presented as percentages of the total fatty acids.
–
, Not detected.
The
type
strain, isolated from ginseng cultivating soil,
Republic of Korea
, is
Gsoil
809
T
(=
KCTC 22820
T
=
JCM
30984
T
).
The G
+C content of the genomic DNA of the type strain is 39.4 mol%.
The
polyamines are homospermidine and methylbenzoate.