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<document id="857A822432F3FB2514ACB0AC89FD02EA" ID-CLB-Dataset="20683" ID-DOI="10.1099/ijsem.0.002405" ID-GBIF-Dataset="76e0a39f-12c8-4a82-8c0b-7a3ce1d95a60" ID-ISSN="1466-5034" ID-Zenodo-Dep="6048406" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644596770692" checkinUser="felipe" docAuthor="Moya, Gabriela, Yan, Zheng-Fei, Chu, Dong-Hun, Won, KyungHwa, Yang, Jung-Eun, Wang, Qi-Jun, Kook, Moo-Chang &amp; Yi, Tae-Hoo" docDate="2018" docId="03FE87A4FF987A23C328BA98FF62FCF0" docLanguage="en" docName="IntJSystEvolMicrobiol.68.1.28-34.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 68 (1)" docSource="http://dx.doi.org/10.1099/ijsem.0.002405" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Deinococcus hibisci Moya &amp; Yan &amp; Chu &amp; Won &amp; Yang &amp; Wang &amp; Kook &amp; Yi 2018, SP. NOV." docType="treatment" docVersion="9" lastPageNumber="33" masterDocId="FFC7FFDCFF9C7A26C013B82CFFDDFFBC" masterDocTitle="Deinococcus hibisci sp. nov., isolated from rhizosphere of Hibiscus syriacus L. (mugunghwa flower)" masterLastPageNumber="34" masterPageNumber="28" pageNumber="32" updateTime="1702001993379" updateUser="plazi">
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<mods:title id="0D0EF6567DFF043F27030D6930078833">Deinococcus hibisci sp. nov., isolated from rhizosphere of Hibiscus syriacus L. (mugunghwa flower)</mods:title>
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<mods:namePart id="630608A0362B5C19143691DB43FE6DC1">Chu, Dong-Hun</mods:namePart>
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<mods:namePart id="8D30E9087EEC650D05B2412FCADC8141">Won, KyungHwa</mods:namePart>
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<mods:namePart id="416C6A33835B8574493BD52F3E7FE34F">Wang, Qi-Jun</mods:namePart>
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<treatment id="03FE87A4FF987A23C328BA98FF62FCF0" ID-DOI="http://doi.org/10.5281/zenodo.6309502" ID-GBIF-Taxon="193364913" ID-Zenodo-Dep="6309502" LSID="urn:lsid:plazi:treatment:03FE87A4FF987A23C328BA98FF62FCF0" httpUri="http://treatment.plazi.org/id/03FE87A4FF987A23C328BA98FF62FCF0" lastPageId="5" lastPageNumber="33" pageId="4" pageNumber="32">
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DESCRIPTION OF
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<emphasis id="B923EAA0FF987A22C423BA98FA83FD6D" bold="true" box="[1072,1374,692,721]" italics="true" pageId="4" pageNumber="32">DEINOCOCCUS HIBISCI</emphasis>
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<taxonomicNameLabel id="A21057DBFF987A22C328BAF5FC6BFD4A" box="[827,950,729,758]" pageId="4" pageNumber="32" rank="species">SP. NOV.</taxonomicNameLabel>
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<taxonomicName id="4C574D31FF987A22C328BB2AFBD5FCA2" authorityName="Moya &amp; Yan &amp; Chu &amp; Won &amp; Yang &amp; Wang &amp; Kook &amp; Yi" authorityYear="2018" box="[827,1032,774,798]" class="Deinococci" family="Deinococcaceae" genus="Deinococcus" kingdom="Bacteria" order="Deinococcales" pageId="4" pageNumber="32" phylum="Deinococcus-Thermus" rank="species" species="hibisci">
<emphasis id="B923EAA0FF987A22C328BB2AFBD5FCA2" box="[827,1032,774,798]" italics="true" pageId="4" pageNumber="32">Deinococcus hibisci</emphasis>
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(hi.bis ci. L. gen. n.
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of the plant genus
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<emphasis id="B923EAA0FF987A22C36DBB08FC0AFC80" box="[894,983,804,828]" italics="true" pageId="4" pageNumber="32">Hibiscus</emphasis>
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).
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Cells are Gram-positive cocci, 2.71.9×1.30.9 µm, strictly aerobic and non-motile. Colonies are smooth, bright, flat, circular, pink-coloured and
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in diameter. Catalase and oxidase activities are positive. Flexirubin-type pigments are not produced. Can grow in TSB at 1538
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C, optimum growth occurs from 2530
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C. Growth occurs on R2A, TSA and NA agar, grows weakly on LA and MacConkey agar but not on MA. Strain THG-AG1.5
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can grow in TSB at pH 6.08.5 (optimum 6.57.5) and in the presence of additional 01.5 % (w/v) NaCl. Cells are able to hydrolyse Tween 80 and CMC but not L- tyrosine, casein, chitin, starch and DNA. Positive for alkaline phosphatase, esterase (C4), esterase lipase (C8), leucine arylamidase, valine arylamidase, cystine arylamidase, trypsin, a- chymotrypsin, acid phosphatase, naphthol-AS-BI-phosphohydrolase, b
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galactosidase, a- glucosidase and b- glucosidase; weakly positive for lipase (C14); negative for a- galactosidase, b- glucuronidase,
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-acetyl-b- glucosaminidase, a- mannosidase and a- fucosidase. Positive for reduction of nitrate to nitrites, assimilation of PNPG, arginine dihydrolase, D- glucose, L- arabinose, D- mannose, D- mannitol, maltose, and hydrolysis of urea, aesculin and gelatin; weakly positive for trisodium citrate; negative for indole production, glucose acidification, assimilation of
<emphasis id="B923EAA0FF987A22C38CBE39FC67F990" box="[927,954,1557,1580]" italics="true" pageId="4" pageNumber="32">N-</emphasis>
acetyl-glucosamine, gluconate, caprate, adipate, malate and phenyl-acetate. Positive for utilization of salicin, melibiose, D- sorbitol, L- histidine, 2-ketogluconate, 3- hydroxy-butyrate, L- proline, sucrose, L- alanine and glycogen; weakly positive for valerate, D- ribose, itaconate, sodium malonate, sodium acetate and
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lactate; negative for L- fucose, propionate, 4-hydroxy-benzoate, L- rhamnose, inositol, suberate, 5-ketogluconate, 3-hydroxy-benzoate and L- serine. Weakly positive for assimilation of glycerol, D- fructose and trehalose; negative for erythritol, D- arabinose, D- xylose, L- xylose, D- adonitol, methyl b- D- xylopyranoside,
<subScript id="17D334F7FF987A22C328BF40FC8DF8C2" attach="none" box="[827,848,1894,1918]" fontSize="7" pageId="4" pageNumber="32">D-</subScript>
galactose,
<subScript id="17D334F7FF987A22C3D2BF40FC0EF8C2" attach="right" box="[961,979,1894,1918]" fontSize="7" pageId="4" pageNumber="32">L-</subScript>
sorbose, dulcitol, methyl a-
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mannopyranoside, methyl a- D- glucopyranoside,
<emphasis id="B923EAA0FF987A22C4A7BFA9FB1AF820" box="[1204,1223,1925,1948]" italics="true" pageId="4" pageNumber="32">N</emphasis>
-acetyl-D- glucosamine, amygdalin, arbutin, cellobiose, lactose, inulin, melezitose, raffinose, xylitol, gentiobiose, D- turanose, D- lyxose, D- tagatose, D- fucose, D- arabitol and L- arabitol. The predominant respiratory quinone is menaquinone-8 (MK-8); and iso-C
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, C
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<emphasis id="B923EAA0FF997A23C0EAB915FED4FEF7" box="[249,265,313,331]" italics="true" pageId="5" pageNumber="33">Ɯ</emphasis>
6
<emphasis id="B923EAA0FF997A23C105B918FEFDFEF7" box="[278,288,308,331]" italics="true" pageId="5" pageNumber="33">c</emphasis>
, C
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, iso-C
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, C
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, C
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and summed feature 3 (C
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<emphasis id="B923EAA0FF997A23C133B974FEEDFED6" box="[288,304,344,362]" italics="true" pageId="5" pageNumber="33">Ɯ</emphasis>
7
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and/or C
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<emphasis id="B923EAA0FF997A23C1C5B974FE3BFED6" box="[470,486,344,362]" italics="true" pageId="5" pageNumber="33">Ɯ</emphasis>
6
<emphasis id="B923EAA0FF997A23C1E0B97FFE20FED6" box="[499,509,339,362]" italics="true" pageId="5" pageNumber="33">c</emphasis>
) are the major components of the cellular fatty acids (Ȅ7 %). The major polar lipids are a phosphoglycolipid, six unidentified glycolipids and an unidentified aminophospholipid. The polyamine is spermidine. The novel strain exhibits tolerance to UV irradiation (&gt;1500 J m
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) and to gamma radiation (&gt;12 kGy). The G+C content of genomic DNA of strain THG-AG1.5
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is 74.8 mol%. The peptidoglycan amino acids are alanine, valine, glutamic acid, glycine, ornithine, lysine and aspartic acid. The whole-cell-wall sugars are ribose, mannose and glucose.
</paragraph>
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<materialsCitation id="3B3F3CEFFF997A23C06ABA94FF62FCF0" ID-GBIF-Occurrence="3465766301" collectedFrom="was isolated from a rhizosphere soil sample of Hibiscus syriacus L. (Mugunghwa flower)" collectionCode="THG-AG" country="South Korea" location="Kyung Hee University" municipality="Yongin" pageId="5" pageNumber="33" specimenCode="THG-AG1.5T" specimenCount="1" stateProvince="Gyeonggi" typeStatus="holotype">
<typeStatus id="54EC8810FF997A23C06ABA94FF65FD6C" box="[121,184,696,720]" pageId="5" pageNumber="33">Strain</typeStatus>
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THG-AG1.5
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</specimenCode>
(=KACC 18850
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=CCTCC AB 2016078
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)
<collectedFrom id="384B754FFF997A23C0E1BAFBFD80FCB2" pageId="5" pageNumber="33">
was isolated from a rhizosphere soil sample of
<taxonomicName id="4C574D31FF997A23C06ABADAFEEBFCB2" box="[121,310,758,782]" class="Magnoliopsida" family="Malvaceae" genus="Hibiscus" kingdom="Plantae" order="Malvales" pageId="5" pageNumber="33" phylum="Tracheophyta" rank="species" species="syriacus">
<emphasis id="B923EAA0FF997A23C06ABADAFEEBFCB2" box="[121,310,758,782]" italics="true" pageId="5" pageNumber="33">Hibiscus syriacus</emphasis>
</taxonomicName>
L. (Mugunghwa flower)
</collectedFrom>
, collected in
<location id="8E886069FF997A23C06ABB39FEA0FC91" LSID="urn:lsid:plazi:treatment:03FE87A4FF987A23C328BA98FF62FCF0:8E886069FF997A23C06ABB39FEA0FC91" box="[121,381,789,813]" country="South Korea" municipality="Yongin" name="Kyung Hee University" pageId="5" pageNumber="33" stateProvince="Gyeonggi">Kyung Hee University</location>
,
<collectingMunicipality id="6B8CACC8FF997A23C181BB39FE3FFC91" box="[402,482,789,813]" pageId="5" pageNumber="33">Yongin</collectingMunicipality>
,
<collectingRegion id="4993F850FF997A23C1E4BB39FD83FC91" box="[503,606,789,813]" country="South Korea" name="Gyeonggi" pageId="5" pageNumber="33">Gyeonggi</collectingRegion>
,
<collectingCountry id="F3407622FF997A23C260BB39FF66FCF0" name="South Korea" pageId="5" pageNumber="33">Republic of Korea</collectingCountry>
.
</materialsCitation>
</paragraph>
</subSubSection>
</treatment>
</document>