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dc: creator " Toporkova, Yana Y.; Askarova, Elena K.; Gorina, Svetlana S.; Mukhtarova, Lucia S.; Grechkin, Alexander N. " ;
dc: title " Selaginella moellendorffii subsp. oxylipin Hieron. 1901 " ;
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bibo: endPage " 12 " ;
bibo: journal " Phytochemistry " ;
bibo: pubDate " 2022-03-31 " ;
bibo: series " 113051 " ;
bibo: startPage " 1 " ;
bibo: volume " 195 " ;
dc: creator " Toporkova, Yana Y.; Askarova, Elena K.; Gorina, Svetlana S.; Mukhtarova, Lucia S.; Grechkin, Alexander N. " ;
dc: date " 2022 " ;
dc: title " Oxylipin biosynthesis in spikemoss Selaginella moellendorffii: Identification of allene oxide synthase (CYP 74 L 2) and hydroperoxide lyase (CYP 74 L 1) " ;
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dwc: authority " Hieron., 1901 " ;
dwc: authorityName " Hieron. " ;
dwc: authorityYear " 1901 " ;
dwc: class " Lycopodiopsida " ;
dwc: family " Selaginellaceae " ;
dwc: genus " Selaginella " ;
dwc: kingdom " Plantae " ;
dwc: order " Selaginellales " ;
dwc: phylum " Tracheophyta " ;
dwc: rank " subSpecies " ;
dwc: scientificNameAuthorship " Hieron., 1901 " ;
dwc: species " moellendorffii " ;
dwc: subSpecies " oxylipin " ;
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dwc: class " Lycopodiopsida " ;
dwc: family " Selaginellaceae " ;
dwc: genus " Selaginella " ;
dwc: kingdom " Plantae " ;
dwc: order " Selaginellales " ;
dwc: phylum " Tracheophyta " ;
dwc: rank " subSpecies " ;
dwc: species " moellendorffii " ;
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dc: description " Fig. 5. The TIC chromatogram of oxylipins (Me/TMS) from the aerial parts of S. moellendorffii plants. DE1, (ω5Z)-etheroleic acid; DE2, etheroleic acid; DE3, (11Z)- etheroleic acid; DE4, etherolenic acid; DE5, (ω5Z)-etherolenic acid; DE6, (11Z)-etherolenic acid; 5, 11-hydroxy-12,13-epoxy-9-octadecenoic acid; 5a, 11-hydroxy- 12,13-epoxy-9,15-octadecadienoic acid; 10, eicosanoic acid; 11, 13-ketooctadecadienoic acid; 12, epimeric 9-hydroxy-12,13-epoxy-10-octadecenoic acid; 12a, epimeric 9-hydroxy-12,13-epoxy-10,15-octadecadienoic acid. Additionally, 13-HOD, as well as cis and trans isomers of 12-OPDA were detected. " ;
fabio: hasRepresentation <https://zenodo.org/record/8235360/files/figure.png> ;
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dc: description " Fig. 6. The multiple alignment of the CYP74L1, CYP74L2, and CYP74L3 sequences of S. moellendorffii with other CYP74s described earlier. Conservative structures are marked as follows: the I-helix groove region (SRS-4) is numbered 1– " ;
fabio: hasRepresentation <https://zenodo.org/record/8235362/files/figure.png> ;
a fabio: Figure .
<http://dx.doi.org/10.5281/zenodo.8235352>
dc: description " Fig. 1. The multiple alignment of the CYP74L1, CYP74L2, and CYP74L3 sequences of S. moellendorffii. Conservative structures are marked as follows: the I-helix groove region (SRS-4) is numbered 1– " ;
fabio: hasRepresentation <https://zenodo.org/record/8235352/files/figure.png> ;
a fabio: Figure .
<http://dx.doi.org/10.5281/zenodo.8235364>
dc: description " Fig. 7. The scheme of catalytic mechanisms of the CYP74L enzymes. " ;
fabio: hasRepresentation <https://zenodo.org/record/8235364/files/figure.png> ;
a fabio: Figure .
<http://dx.doi.org/10.5281/zenodo.8235366>
dc: description " Fig. 8. The unrooted phylogenetic tree of the CYP74 clan. Classified CYP74 subfamilies are marked with their letter designation (A, B, C etc.). Subfamilies consisting of more than one member are outlined with unclosed curves (semi-ellipses). Plant CYP74s: As, Allium sativum; AsDES, CYP74H1, GI:83414021; At, Arabidopsis thaliana; AtAOS, CYP74A1, GI:15239032; AtHPL, CYP74B2, GI:3822403; Ca, Capsicum annuum; CaHPL, CYP74B1, GI:1272340; Cm, Cucumis melo; CmHPL/EAS, CYP74C2, GI:14134199; Cs, C. sativus; CsHPL/EAS, CYP74C1, GI:101211324; CsHPL/EAS/AOS, CYP74C31 GI:101211574; Dc, Daucus carota; DcAOS, CYP74B33, GI:10821971; Gm, Glycine max; GmHPL/EAS (CYP74C13_Gm), KRH29541.1; Hv, Hordeum vulgare; HvAOS2, CYP74A3, GI:7452981; HvHPL, CYP74F3, GI: 22265998; Kf, K. flaccidum (green alga); KfAOS, SI:LC032459; Le, Solanum lycopersicum; LeAOS1, CYP74A1, GI:7581989; LeAOS2, CYP74A2, GI:7677376; LeAOS3, CYP74C3, GI:25991603; LeHPL, CYP74B3, GI:7677378; LeDES (CYP74D1), NP001234527.1; Lu, Linum usitatissimum; LuAOS, CYP74A1, GI:1352186; LuDES, CYP74B16, GI:379048766; Mp, M. polymorpha; MpAOS1, SI:LC032457.1, MpAOS2, SI:LC032458.1; Mt, Medicago truncatula; MtHPL3, CYP74B5, GI:63081244; MtHPL1/EAS, CYP74C13, GI:33504430; Nt, Nicotiana tabacum; NtDES, CYP74D3; GI: 107799697; Os, Oryza sativa; OsAOS, CYP74A4, GI:115455571; OsHPL1, CYP74E2, GI:115445057; OsHPL2, CYP74E1, GI:125538638; Pa, Parthenium argentatum; PaAOS, CYP74A1, GI:218511958; Pd, Prunus dulcis; PdHPL, CYP74C5, GI:33300600; Pg, Psidium guajava; PgHPL, CYP74B5, GI:13183137; Pi, Petunia inflata; PiCYP74C9, GI:85720841; Pp, P. patens; PpAOS1, CYP74A1, GI:22217985; PpAOS2, CYP74A8, GI:168014176; PpHPL, CYP74G1, GI:76057841; Ra, Ranunculus acris; RaDES, CYP74Q1, GI:768564485; Rj, Ranunculus japonicus; RjEAS, CYP74A88, SI:MK061531; Sm, S. moellendorffii; SmDES1, CYP74M1, GI:9660714; SmEAS, CYP74M2, GI:9637471 SmDES2, CYP74M3, GI:9654395; SmAOS2, CYP74K3, EFJ20163.1; CYP74L1, XP002969700.1; CYP74L2, XP002972651.1; CYP74L3, EFJ25870.1; St, Solanum tuberosum; StAOS2, CYP74A6, GI:86769479; StAOS3, CYP74C10, GI:56605358; StHPL/EAS, CYP74C4, GI:102588560; StDES, CYP74D2, GI:12667099; Zm, Zea mays; ZmAOS, CYP74A19, GI:223947589; ZmHPL, CYP74F2, GI:162462890. CYP74 clan members: Es, E. siliculosus (brown alga); EsEAS, CYP5164B1, GI:1109557544; Mn, M. nodulans (proteobacteria); MnHPL, SI:WP_015932840.1; Msp, Methylobacterium sp. 4– " ;
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a fabio: Figure .
