177 lines
13 KiB
XML
177 lines
13 KiB
XML
<document id="88571C066680550EDA054C0BBED4C568" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" XM.bibliography_approvedBy="admin" XM.materialsCitations_approvedBy="admin" XM.taxonomicNames_approvedBy="admin" XM.treatmentCitations_approvedBy="admin" XM.treatments_approvedBy="admin" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="5A06EDBE08CB5D3EBC1C68891B139752" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Tammsaarea vivikae Tedersoo 2024, sp. nov." docType="treatment" docVersion="3" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723229325626" updateUser="admin">
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<mods:mods id="CC0AA8497954F3AA25347220E01E6047" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="F517876089A2F13522AB77897E3E78CC">
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<mods:title id="D09338282285D1EDF4A2F70164641E76">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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</mods:titleInfo>
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<mods:name id="28D46860736709BCBDEE501001A5BDA4" type="personal">
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<mods:role id="3492AD066EF820F10DEEEE320A347D9F">
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<mods:roleTerm id="0AB37B41AF3182276ABFF9C5D455BD78">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="235B675DA985EE3FB206FF6A44D058CD">Tedersoo, Leho</mods:namePart>
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<mods:affiliation id="A82C0FB539B78D9A15BD3ED60DE6BBAA">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="F6B541932CEA97E1EFCBBE3F9B20B307" type="personal">
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<mods:role id="4183D66041E89616844CF3CF437955B9">
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<mods:roleTerm id="AD5D7FB206C354B50FD7D2DF42AB57BB">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="A18F390D1734B61F2C374EE489B09828">Magurno, Franco</mods:namePart>
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<mods:nameIdentifier id="43595E658271B7A4AB47F23CADC2C05C" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
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<mods:affiliation id="3DDC76B48A5225C984F5FB531C545904">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
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</mods:name>
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<mods:name id="09239A3980FCAEBF5AA58ECE41E8D01B" type="personal">
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<mods:roleTerm id="56A38821C2E0BF3D29E16ACBAB6536C9">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="B9EFB2E0E106E5F111685E6E37AB6CB4">Alkahtani, Saad</mods:namePart>
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<mods:nameIdentifier id="3703983E88D17F5C3E5F74EB83118BD9" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
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<mods:affiliation id="73FB3DC8B9A1B31D81791EF8547AED37">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="EA505BED307A8F2C5C1798AD3B53728C" type="personal">
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<mods:roleTerm id="59F66817B226913636CD6B1F89525837">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="9878FC5320F5D9C81E3120AA99C20096">Mikryukov, Vladimir</mods:namePart>
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<mods:nameIdentifier id="DD0DACC42463E40EBC5ADD31BF5A9DB7" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
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<mods:affiliation id="31EA81197DDA864863EDB13EF72A694F">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="E9761AF6AA961DC4C50C5C7FCD7C3D07">text</mods:typeOfResource>
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<mods:titleInfo id="8ED5B1C573868A3FD7110BABDD573BF3">
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<mods:title id="78EA39ED25DF2B5E949275A2A380DF8E">MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part id="D8544BBFACD72D71EA06FB37BE1A7CF7">
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<mods:date id="2BC2515ACE1259A07D24B568764911C8">2024</mods:date>
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<mods:detail id="7246C58B907E0A7D57898BE195BEBF3E" type="pubDate">
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<mods:number id="46055A4BAD49AF7DE59DFB60B144ADE0">2024-08-09</mods:number>
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</mods:detail>
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<mods:detail id="309356D4F125B0B865ED63858C6FDEC9" type="volume">
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<mods:number id="2DC04A0E7F3BB921F15DB408F46AF0BF">107</mods:number>
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</mods:detail>
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<mods:extent id="52FF3676EA844F8C19F79D826729A5B2" unit="page">
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<mods:start id="7ABF2CC3456191275B4FFE377B9A434A">249</mods:start>
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<mods:end id="A444E2EC9AAED2493CB61FA4468BBF9D">271</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification id="71EE354BBEA5E4BA12AE7DA7E7610942">journal article</mods:classification>
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<mods:identifier id="D0FAA8060955C4D1C26C3C92FEDEA045" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
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</mods:mods>
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<treatment id="5A06EDBE08CB5D3EBC1C68891B139752" ID-DOI="http://doi.org/10.5281/zenodo.13286583" ID-Zenodo-Dep="13286583" ID-arpha="5A06EDBE-08CB-5D3E-BC1C-68891B139752" ID-mycobank="853683" LSID="urn:lsid:plazi:treatment:5A06EDBE08CB5D3EBC1C68891B139752" httpUri="http://treatment.plazi.org/id/5A06EDBE08CB5D3EBC1C68891B139752">
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<subSubSection id="2600DC3A4DF895E79DC71AE73441B555" type="nomenclature">
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<paragraph id="02E6225B0D28BB357425C5795492816F">
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<taxonomicName id="20792807F313727B28797D5ADA1F0521" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" class="Magnoliopsida" family="Tammsaareaceae" genus="Tammsaarea" kingdom="Fungi" order="Tammsaareales" phylum="Tracheophyta" rank="species" species="vivikae" status="sp. nov.">
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<emphasis id="63CFDA1AF64DAB3842DF88D506FF75E7" italics="true">Tammsaarea vivikae</emphasis>
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Tedersoo
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</taxonomicName>
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<taxonomicNameLabel id="AE8FC5CA03090C562E770730D0172850" rank="species">sp. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0ERLDK" type="diagnosis">
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<paragraph id="2EE2763DB6B11E7F1B70C3D7EC8215AF">
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<heading id="225D0310391884A8E49E6408A4E6FAF1" reason="title">Diagnosis.</heading>
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</paragraph>
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<paragraph id="DFE55A4B35CDBD303DC2F8E3CB18DB45">
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Separation from other species of
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<taxonomicName id="2A0635B3F11D7CC70A4ABF830C9DA013" class="Magnoliopsida" family="Dipterocarpaceae" genus="Tammsaarea" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
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<emphasis id="44C100A494A78FEE90A98619DDBC8F8B" italics="true">Tammsaarea</emphasis>
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</taxonomicName>
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and other species of
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<taxonomicName id="D3B28573447094DB9EC942336C991981" class="Endogonomycetes" higherTaxonomySource="CoL,GBIF" kingdom="Fungi" phylum="Mucoromycota" rank="class">Endogonomycetes</taxonomicName>
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based on
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<abbrev id="ABBRID0EEMDK" xlink_title="internal transcribed spacer">ITS</abbrev>
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(positions 228–257 ggaccgagaaggcgcaatagttgaacaatt; one mismatch allowed) and LSU (positions 585–604 ataactatcggacaaagttt; one mismatch allowed) as indicated in Fig.
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<figureCitation id="FBD60187745062D7CEE64B62337647C9" captionStart="Figure 16" captionStartId="F16" captionText="Figure 16. Diagnostic barcodes for Tammsaarea vivikae relative to closely-related taxa in ITS 2 and LSU." figureDoi="10.3897/mycokeys.107.125549.figure16" httpUri="https://binary.pensoft.net/fig/1111403">16</figureCitation>
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.
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</paragraph>
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<caption id="8A9F72EF8621E1E90836FAE2C9F4FAAF" ID-DOI="10.3897/mycokeys.107.125549.figure16" ID-arpha="4D9FBF43-ECA9-5E66-8DBC-ED687AD7F6CE" httpUri="https://binary.pensoft.net/fig/1111403" startId="F16">
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<paragraph id="DB2409E31C974A6BABF9B188F904DD8C">
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<label id="2D599EB50F7479BB9B012EC330681B43">Figure 16.</label>
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</paragraph>
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<paragraph id="55D009A1CFE9C74DE8A174A3B23885D4">
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Diagnostic barcodes for
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<taxonomicName id="86852061346CC8267FF22849B9FD357F" class="Magnoliopsida" family="Dipterocarpaceae" genus="Tammsaarea" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="species" species="vivikae">
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<emphasis id="5AF01F596297AD3ECBB7D56BD2CD7F97" italics="true">Tammsaarea vivikae</emphasis>
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</taxonomicName>
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relative to closely-related taxa in ITS 2 and LSU.
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</paragraph>
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</caption>
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</subSubSection>
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<subSubSection id="SECID0EENDK" type="material">
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<paragraph id="A19D0926D1006A7DE160948F9E87E962">
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<heading id="ABED81DA19C6B378B2C3AECC78C70315" reason="title">Type.</heading>
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</paragraph>
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<paragraph id="274263762EF3E84AF52EE42EF12BE46B">
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<materialsCitation id="A66039B1E01F685D259B8C04976AE0D9" collectedFrom="Populus tremula forest" collectionCode="TUE, EUK" country="Estonia" latitude="57.84444" location="Tammsaare" longLatPrecision="1" longitude="27.20141" specimenCode="TUE 100731, EUK 1602762, TUE 000731" specimenCount="2" typeStatus="holotype">
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<abbrev id="ABBRID0EKNDK" xlink_title="environmental DNA">eDNA</abbrev>
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sample
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<specimenCode id="AA3C40E32C65F91503E4F1569DC98285">TUE 100731</specimenCode>
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(
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<emphasis id="977BB57ABB2645A0563D4842AC64A20B" bold="true" italics="true">
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<typeStatus id="B0264399BC95553CADDAB9FFBB21C213" type="holotype">holotype</typeStatus>
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</emphasis>
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);
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<abbrev id="ABBRID0ERNDK" xlink_title="environmental DNA">eDNA</abbrev>
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sequence
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<specimenCode id="39C9E6B5E1E9857727DA14D026D8DCC8">EUK 1602762</specimenCode>
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(
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<emphasis id="DC9D2198476ECB75F18284146D046BE5" bold="true" italics="true">
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<typeStatus id="9B00D357808578B6AE12A64E2CCE782B" type="lectotype">lectotype</typeStatus>
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</emphasis>
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);
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<abbrev id="ABBRID0EYNDK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot G 4189,
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<collectedFrom id="64C23CBB2A1D6AC418C283591171478A">
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<taxonomicName id="56F4EC0BFAF6588F968C4A2385C8036D" class="Magnoliopsida" family="Salicaceae" genus="Populus" kingdom="Plantae" order="Malpighiales" phylum="Tracheophyta" rank="species" species="tremula">
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<emphasis id="718309DF90C538550F726A98BB372E57" italics="true">Populus tremula</emphasis>
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</taxonomicName>
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forest
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</collectedFrom>
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(soil sample
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<specimenCode id="176A191E06C3224F505FC9AFCE78BA95">TUE 000731</specimenCode>
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) in
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<emphasis id="883108DB30B677653F3B127BB153D80B" italics="true">
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<location id="28DB3F99B65362F9DF8E7F8502EDE02E" LSID="urn:lsid:plazi:treatment:5A06EDBE08CB5D3EBC1C68891B139752:28DB3F99B65362F9DF8E7F8502EDE02E" country="Estonia" latitude="57.84444" longLatPrecision="1" longitude="27.20141" name="Tammsaare">Tammsaare</location>
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</emphasis>
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,
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<collectingCountry id="3A234DBB1A2BAEED8F39CEECB0488254" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EQODK" specific-use="{"type":"Point","coordinates":[27.201410,57.844440]}">
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<geoCoordinate id="95C5EEABF526235C943960864CF5DECE" degrees="57.84444" direction="north" orientation="latitude" precision="1" value="57.84444">57.84444 ° N</geoCoordinate>
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,
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<geoCoordinate id="900EDD66268A53202139C5B0EF180FB0" degrees="27.20141" direction="east" orientation="longitude" precision="1" value="27.20141">27.20141 ° E</geoCoordinate>
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</named-content>
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EVODK" type="description">
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<paragraph id="7083C6C4B944C3D638AAEA57EEA6A16A">
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<heading id="42CD13619E8935EF3B15E300AED4EA46" reason="title">Description.</heading>
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</paragraph>
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<paragraph id="936F952148FBA7A31254ECCA3C36022E">Other sequences EUK 1604048 and EUK 1604049 (type locality).</paragraph>
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</subSubSection>
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<subSubSection id="SECID0E1ODK" type="etymology">
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<paragraph id="BAB41DBF4A00CBB91086403C3F8CBBB0">
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<heading id="731604BD6F939A9119D1ED7311AEFC83" reason="title">Etymology.</heading>
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</paragraph>
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<paragraph id="5128DB81903E7A96E03F9D17296CC015">
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<emphasis id="B79510A99F30BB51F1CDF9A54809E05B" italics="true">Tammsaare</emphasis>
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(Estonian) refers to the type locality and one of the most famous Estonian writers, Anton Hansen Tammsaare; and
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<emphasis id="D86AD3216321F95D12179C32DF333CE7" italics="true">Vivika</emphasis>
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(Estonian) refers to the first name of Vivika Adamson who provided access to the type locality.
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0E1PDK" type="notes">
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<paragraph id="04C1574705DF19000B1BE7320F404A1E">
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<heading id="648FB2AA884AF7428D7DA3720750FCC9" reason="title">Notes.</heading>
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</paragraph>
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<paragraph id="9D0537837F644179629D3C8DFA4B19E6">
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Found from a single locality in
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<collectingCountry id="E5434BFDA3F9726063A221C8798B2CA9" name="Estonia">Estonia</collectingCountry>
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, with
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<abbrev id="ABBRID0EAQDK" xlink_title="internal transcribed spacer">ITS</abbrev>
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and LSU sequences differing up to 0.5 % and 0.3 %, respectively.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |