treatments-xml/data/03/A8/D9/03A8D903D202024CFFD0FB16542433E3.xml
2024-06-21 12:22:17 +02:00

202 lines
17 KiB
XML
Raw Blame History

This file contains ambiguous Unicode characters

This file contains Unicode characters that might be confused with other characters. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

<document id="F31FF754408356B44454D4CD02FA387C" ID-CLB-Dataset="7136" ID-DOI="10.1099/ijsem.0.004107" ID-GBIF-Dataset="c650e745-85a1-48ca-b29a-b1714f644bae" ID-Zenodo-Dep="4730536" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" checkinTime="1619726709930" checkinUser="valdenar" docAuthor="Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, OToole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. &amp; Lebeer, Sarah" docDate="2020" docId="03A8D903D202024CFFD0FB16542433E3" docLanguage="en" docName="Int.J.Syst.Evol.Microbiol.70.2782-2858.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Lactobacillus amylovorus" docType="treatment" docVersion="10" lastPageNumber="2795" masterDocId="FF91A17BD20F0241FFA9FFF45102331E" masterDocTitle="A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae" masterLastPageNumber="2858" masterPageNumber="2782" pageNumber="2795" updateTime="1698938060401" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
<mods:mods id="6C3E05EFFDAA8DA01D3AACD65F587E6C" xmlns:mods="http://www.loc.gov/mods/v3">
<mods:titleInfo id="4917A7C9653F45B8FC9459816B22BD0F">
<mods:title id="A14CD98A3CA200DEB16D5CE855F94B49">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
</mods:titleInfo>
<mods:name id="078CC667CAACB052CB785D36F264A491" type="personal">
<mods:role id="D29C7D137F8C88879A2EA8954E33FA6D">
<mods:roleTerm id="BACB1961AD3996F57AFBBE4494EC8395">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="8FFE7218B6BF8A4CF57422796E496C3D">Zheng, Jinshui</mods:namePart>
</mods:name>
<mods:name id="4BEA08BFCE1A159C57A814F38FFB8726" type="personal">
<mods:role id="EB472F57F15F1733E0141C592730637A">
<mods:roleTerm id="480616585968345805CCBAC8138B3792">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="A5CABB61F546EB271ACE0A3DAA9E252D">Wittouck, Stijn</mods:namePart>
</mods:name>
<mods:name id="C1417F68DF1D342157AA71AAE002B7B2" type="personal">
<mods:role id="FA0F8169F04BAD4B5ADB1DED3BA8218D">
<mods:roleTerm id="9E6CB8D2BBE1F0E649986BF6FCFDA9B5">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="76B331353FDA2A110AE2FBD226F7EEF3">Salvetti, Elisa</mods:namePart>
</mods:name>
<mods:name id="6E68B6FE8EA631ED8917B66FF62F2276" type="personal">
<mods:role id="9F8ABB2E8BD980138169AA3C6F901FCC">
<mods:roleTerm id="14383261982401692BDB45164B50544E">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="49E8B99CB1EB78B1F1BD1C097D2DBC8F">Franz, Charles M. A. P.</mods:namePart>
</mods:name>
<mods:name id="E0CE59A9211B645D7BC723E50026DA6E" type="personal">
<mods:role id="E926D8003E0585789C42F7B359316ABD">
<mods:roleTerm id="EF82A28644760BC1FCE18C70799DCDBF">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="405509956D4D1B4103447BC1472989DB">Harris, Hugh M. B.</mods:namePart>
</mods:name>
<mods:name id="DA47AA22BA36D7EC1236E16514F50C43" type="personal">
<mods:role id="2E2C9FF3F85D64252932A19FC5E3CF7A">
<mods:roleTerm id="1A8C5632803C473CE6B3D0F326035BF5">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="882592D821CF81231D57DFD1461E2B3B">Mattarelli, Paola</mods:namePart>
</mods:name>
<mods:name id="ABD6A7B57DDE290A7EF31F194989523D" type="personal">
<mods:role id="39CF8A15C61DD4975BFB2C9623C6FBDE">
<mods:roleTerm id="C50AF04C7F552DE018FED8D2389E28D2">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="1D537A9B69DC0E70C70221E5AEC7DE4F">OToole, Paul W.</mods:namePart>
</mods:name>
<mods:name id="BD715B4126002DEC3F05F1258A2DE936" type="personal">
<mods:role id="4232E7B18343F32A3BFB63D3507B9FBB">
<mods:roleTerm id="726AFB2DAA743EC4320189250F8597A3">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="972F194F7C0D168C0CA0AA5F1A9D1BA6">Pot, Bruno</mods:namePart>
</mods:name>
<mods:name id="C2D4CD3E8D69F15E915963C3B900468B" type="personal">
<mods:role id="2C76D89228AC032DDED50F9A4CE10F0A">
<mods:roleTerm id="F52563289477515D647146932FBF3B92">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="82EC8367B1CB87B8B90A833D9E122972">Vandamme, Peter</mods:namePart>
</mods:name>
<mods:name id="1D4324B9AFA37E93EB2C486991738F0F" type="personal">
<mods:role id="9DC088432D3022F74020849B55CCE51F">
<mods:roleTerm id="D7015A0AA4C7F9D3DA6A4EE9FB42EF15">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="CB259B1762E3C7A36BBD83FA83CBEF34">Walter, Jens</mods:namePart>
</mods:name>
<mods:name id="EA5A6F5C9DCAFDFCE9733BEAD0BE6EFB" type="personal">
<mods:role id="594634527BB970F4360E8C52E1C328DA">
<mods:roleTerm id="AE5E2398F6AC7E53D5568BC7EBEA8C66">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="AC6C2B18962240FC0C08166D2CDC8A75">Watanabe, Koichi</mods:namePart>
</mods:name>
<mods:name id="3FD3926DE869A3163F446595235FD2E1" type="personal">
<mods:role id="6B597B917E5D21BC0315266C03B471D6">
<mods:roleTerm id="E0844B17EDABDD5D0AD45E38D375C6ED">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="B6D38A6706F02206193514AF95FE2473">Wuyts, Sander</mods:namePart>
</mods:name>
<mods:name id="1452E4CEFE55EB3A21436F5D5791019F" type="personal">
<mods:role id="A16B765BBE7D0720049BA326B2B38EA1">
<mods:roleTerm id="50E7C1CCFEDE651CBEA6E35BA07AA5BA">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="5C72490BFFE8CC2857B13FFB01CF88D6">Felis, Giovanna E.</mods:namePart>
</mods:name>
<mods:name id="552EF2050084AD78AE0C36F654C89752" type="personal">
<mods:role id="CF1F17D399D50841FE9E96AF76B12BE9">
<mods:roleTerm id="7D73667B2F4F5BB4199A320328661EF1">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="8CF565D48A74747F5B36D08E4804FD5F">Gänzle, Michael G.</mods:namePart>
</mods:name>
<mods:name id="A93CE6398AE97B5DD399B7F95828E143" type="personal">
<mods:role id="604F58258CA20A9D8461258DFA3BFCB0">
<mods:roleTerm id="87D775EEC75038953D7411587675543F">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="DE278D1D736575706DF99E8D49AADA9D">Lebeer, Sarah</mods:namePart>
</mods:name>
<mods:typeOfResource id="60992333F24FD2CF31B1AF05F6021ADE">text</mods:typeOfResource>
<mods:relatedItem id="B815A7CC90B3CC25FE1429FD012BE37E" type="host">
<mods:titleInfo id="ABD06471BAD9EECD95D7A8791FAAF04B">
<mods:title id="C178E090A490D13C54CE63E60A5C659E">International Journal of Systematic and Evolutionary Microbiology</mods:title>
</mods:titleInfo>
<mods:part id="11717E66772FA0DA794E75E2604D0BA2">
<mods:date id="DCDA2BD211862E4ECB7CB254446C9C94">2020</mods:date>
<mods:detail id="A26FA05B46DEC859E630A71F1BCD252A" type="pubDate">
<mods:number id="4689C7E7536565907059972EEE806AA1">2020-04-15</mods:number>
</mods:detail>
<mods:detail id="61CEA7ECED8F9582C90B98A4721E8615" type="volume">
<mods:number id="F15C4311F562722103A25863B2AC6919">70</mods:number>
</mods:detail>
<mods:extent id="7267BD8943AC5279949F6740A363CBCB" unit="page">
<mods:start id="EAB64AAC84885016BB305F8A9E7D18C6">2782</mods:start>
<mods:end id="7E5F3A8959D8C8978689A3CA002747B0">2858</mods:end>
</mods:extent>
</mods:part>
</mods:relatedItem>
<mods:classification id="FAB6D4763B74E54F5178F1D8961B3B54">journal article</mods:classification>
<mods:identifier id="2D5589E8AC3FDB02B1E387AD92A52472" type="CLB-Dataset">7136</mods:identifier>
<mods:identifier id="F5A073006471040B250D218A0EFA9EC3" type="DOI">10.1099/ijsem.0.004107</mods:identifier>
<mods:identifier id="BE42F4AD02B22F8634DDAB61EE2AB9DA" type="GBIF-Dataset">c650e745-85a1-48ca-b29a-b1714f644bae</mods:identifier>
<mods:identifier id="7372E643AEE180446D8719A01F24E3D8" type="Zenodo-Dep">4730536</mods:identifier>
</mods:mods>
<treatment id="03A8D903D202024CFFD0FB16542433E3" ID-DOI="http://doi.org/10.5281/zenodo.4728284" ID-GBIF-Taxon="181761792" ID-Zenodo-Dep="4728284" LSID="urn:lsid:plazi:treatment:03A8D903D202024CFFD0FB16542433E3" httpUri="http://treatment.plazi.org/id/03A8D903D202024CFFD0FB16542433E3" lastPageNumber="2795" pageId="13" pageNumber="2795">
<subSubSection id="C31B3B9ED202024CFFD0FB1650A937E2" box="[121,427,1250,1276]" pageId="13" pageNumber="2795" type="nomenclature">
<paragraph id="8BBE6815D202024CFFD0FB1650A937E2" blockId="13.[121,760,1250,1374]" box="[121,427,1250,1276]" pageId="13" pageNumber="2795">
<heading id="D0F6DF79D202024CFFD0FB1650A937E2" bold="true" box="[121,427,1250,1276]" fontSize="11" level="2" pageId="13" pageNumber="2795" reason="0">
<taxonomicName id="4C011396D202024CFFD0FB1650A937E2" ID-CoL="3RSPV" box="[121,427,1250,1276]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="13" pageNumber="2795" phylum="Firmicutes" rank="species" species="amylovorus">
<emphasis id="B975B407D202024CFFD0FB1650A937E2" bold="true" box="[121,427,1250,1276]" italics="true" pageId="13" pageNumber="2795">Lactobacillusamylovorus</emphasis>
</taxonomicName>
</heading>
</paragraph>
</subSubSection>
<subSubSection id="C31B3B9ED202024CFFD0FAFD50F035D0" pageId="13" pageNumber="2795" type="discussion">
<paragraph id="8BBE6815D202024CFFD0FAFD50423640" blockId="13.[121,760,1250,1374]" pageId="13" pageNumber="2795">
<taxonomicName id="4C011396D202024CFFD0FAFD5083363F" box="[121,385,1289,1313]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="13" pageNumber="2795" phylum="Firmicutes" rank="species" species="amylovorus">
<emphasis id="B975B407D202024CFFD0FAFD5083363F" box="[121,385,1289,1313]" italics="true" pageId="13" pageNumber="2795">Lactobacillusamylovorus</emphasis>
</taxonomicName>
(a.my.lo.vorus. Gr. neut. n.
<emphasis id="B975B407D202024CFD03FAFD53FA363F" box="[682,760,1289,1313]" italics="true" pageId="13" pageNumber="2795">amylon</emphasis>
starch, L.
<taxonomicName id="4C011396D202024CFF40FADC50453621" box="[233,327,1320,1343]" pageId="13" pageNumber="2795" rank="variety" variety="vorare">
v.
<emphasis id="B975B407D202024CFEADFADC50453621" box="[260,327,1320,1343]" italics="true" pageId="13" pageNumber="2795">vorare</emphasis>
</taxonomicName>
to devour, N.L. masc. adj.
<taxonomicName id="4C011396D202024CFDD5FAD353F53621" box="[636,759,1319,1343]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="13" pageNumber="2795" phylum="Firmicutes" rank="species" species="amylovorus">
<emphasis id="B975B407D202024CFDD5FAD353F53621" box="[636,759,1319,1343]" italics="true" pageId="13" pageNumber="2795">amylovorus</emphasis>
</taxonomicName>
starch-devouring).
</paragraph>
<paragraph id="8BBE6815D202024CFFD0FA8050A436B5" blockId="13.[121,760,1396,1451]" pageId="13" pageNumber="2795">
The species includes strains that were previously designated as
<taxonomicName id="4C011396D202024CFF3DFA67506F36B5" box="[148,365,1427,1451]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="13" pageNumber="2795" phylum="Firmicutes" rank="species" species="sobrius">
<emphasis id="B975B407D202024CFF3DFA67506F36B5" box="[148,365,1427,1451]" italics="true" pageId="13" pageNumber="2795">Lactobacillus sobrius</emphasis>
</taxonomicName>
[
<bibRefCitation id="EF9015E4D202024CFED2FA67509936B5" author="Jakava-Viljanen M &amp; Murros A &amp; Palva A &amp; Bjorkroth KJ &amp; Int J" box="[379,411,1427,1451]" pageId="13" pageNumber="2795" pagination="910 - 913" refId="ref62418" refString="74. Jakava-Viljanen M, Murros A, Palva A, Bjorkroth KJ. Lactobacillus sobrius Konstantinov et al. 2006 is a later synonym of Lactobacillus amylovorus Nakamura 1981. Int J Syst Evol Microbiol 2008; 58: 910 - 913." type="journal article" year="2008">74</bibRefCitation>
].
</paragraph>
<paragraph id="8BBE6815D202024CFFD0FA3450F035D0" blockId="13.[120,766,1472,1742]" pageId="13" pageNumber="2795">
<taxonomicName id="4C011396D202024CFFD0FA34507F36C6" box="[121,381,1472,1496]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="13" pageNumber="2795" phylum="Firmicutes" rank="species" species="amylovorus">
<emphasis id="B975B407D202024CFFD0FA34507F36C6" box="[121,381,1472,1496]" italics="true" pageId="13" pageNumber="2795">Lactobacillusamylovorus</emphasis>
</taxonomicName>
produces both D()- and L(+)-lactic acidand acidis producedfrom cellobiose, fructose, galactose, glucose, maltose, mannose, sucrose, starch and trehalose. Arabinose, melezitose, melibiose, raffinose, rhamnose and ribose are not fermented. The ability to ferment starch and thepresence of an extracellularamylolytic enzyme are distinguishing characteristics [
<bibRefCitation id="EF9015E4D202024CFE2DF98C50A6358E" author="Nakamura LK &amp; Int J" box="[388,420,1656,1680]" pageId="13" pageNumber="2795" pagination="56 - 63" refId="ref62462" refString="75. Nakamura LK. Lactobacillus amylovorus, a new starchhydrolyzing species from cattle waste-corn fermentations. Int J Syst Bacteriol 1981; 31: 56 - 63." type="journal article" year="1981">75</bibRefCitation>
]. Growth maximum is 45 to 48 °C. The genome size of the type strain is 2.02 Mbp and the mol% G+C content of DNAis 37.8.
</paragraph>
</subSubSection>
<subSubSection id="C31B3B9ED202024CFFD0F910542433E3" pageId="13" pageNumber="2795" type="description">
<paragraph id="8BBE6815D202024CFFD0F91050F13427" blockId="13.[120,760,1764,1849]" pageId="13" pageNumber="2795">
Themicroorganism is acharacteristic representative of swine intestinal microbiota [
<bibRefCitation id="EF9015E4D202024CFECDF8F650803404" author="Wang W &amp; Hu H &amp; Zijlstra RT &amp; Zheng J &amp; Ganzle MG" box="[356,386,1794,1818]" pageId="13" pageNumber="2795" pagination="48" refId="ref61615" refString="54. Wang W, Hu H, Zijlstra RT, Zheng J, Ganzle MG. Metagenomic reconstructions of gut microbial metabolism in weanling pigs. Microbiome 2019; 7: 48." type="journal article" year="2019">54</bibRefCitation>
,
<bibRefCitation id="EF9015E4D202024CFE24F8F650A93404" author="Leser TD &amp; Amenuvor JZ &amp; Jensen TK &amp; Lindecrona RH &amp; Boye M" box="[397,427,1794,1818]" pageId="13" pageNumber="2795" pagination="673 - 690" refId="ref62491" refString="76. Leser TD, Amenuvor JZ, Jensen TK, Lindecrona RH, Boye M et al. Culture-Independent analysis of gut bacteria: the pig gastrointestinal tract microbiota revisited. Appl Environ Microbiol 2002; 68: 673 - 690." type="journal article" year="2002">76</bibRefCitation>
]; also isolated from sourdough and cattle waste-corn fermentation.
</paragraph>
<paragraph id="8BBE6815D202024CFFD0F8BB508934BD" blockId="13.[121,760,1869,1956]" pageId="13" pageNumber="2795">
Thetypestrainis ATCC 33620
<superScript id="7C74C55DD202024CFE55F8B953043445" attach="none" box="[508,518,1869,1883]" fontSize="6" pageId="13" pageNumber="2795">T</superScript>
=CCUG 27201
<superScript id="7C74C55DD202024CFD1AF8B953BF3445" attach="none" box="[691,701,1869,1883]" fontSize="6" pageId="13" pageNumber="2795">T</superScript>
=CIP 102989
<superScript id="7C74C55DD202024CFF6EF89851D33464" attach="none" box="[199,209,1900,1914]" fontSize="6" pageId="13" pageNumber="2795">T</superScript>
=DSM 20531
<superScript id="7C74C55DD202024CFECFF89850723464" attach="right" box="[358,368,1900,1914]" fontSize="6" pageId="13" pageNumber="2795">T</superScript>
=JCM 1126
<superScript id="7C74C55DD202024CFE58F89850F93464" attach="none" box="[497,507,1900,1914]" fontSize="6" pageId="13" pageNumber="2795">T</superScript>
=LMG 9496
<superScript id="7C74C55DD202024CFD2DF898538C3464" attach="right" box="[644,654,1900,1914]" fontSize="6" pageId="13" pageNumber="2795">T</superScript>
=NCAIM B.01458
<superScript id="7C74C55DD202024CFF67F87F51DA3487" attach="none" box="[206,216,1931,1945]" fontSize="6" pageId="13" pageNumber="2795">T</superScript>
=NRRL B-4540
<superScript id="7C74C55DD202024CFED4F87F50873487" attach="none" box="[381,389,1931,1945]" fontSize="6" pageId="13" pageNumber="2795">T</superScript>
.
</paragraph>
<paragraph id="8BBE6815D202024CFC95FF43548833D1" blockId="13.[828,1418,183,207]" box="[828,1418,183,207]" pageId="13" pageNumber="2795">Genome sequence accession number: AZCM00000000.</paragraph>
<paragraph id="8BBE6815D202024CFC95FF11542433E3" blockId="13.[828,1318,229,253]" box="[828,1318,229,253]" pageId="13" pageNumber="2795">
16S rRNA gene accession number:
<accessionNumber id="9452F5F6D202024CFB18FF11542133E3" box="[1201,1315,229,253]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AY944408" pageId="13" pageNumber="2795">AY944408</accessionNumber>
.
</paragraph>
</subSubSection>
</treatment>
</document>