216 lines
18 KiB
XML
216 lines
18 KiB
XML
<document id="0452A7E071A45928919DF82DF038BD40" ID-DOI="10.1099/ijsem.0.004107" ID-ISSN="1466-5034" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644597203828" checkinUser="felipe" docAuthor="Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O’Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah" docDate="2020" docId="0389878AFFBD2141DA0BFC39FA9967A5" docLanguage="en" docName="IntJSystEvolMicrobiol.70.4.2782-2858.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70 (4)" docSource="http://dx.doi.org/10.1099/ijsem.0.004107" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Paucilactobacillus wasatchensis Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020, COMB. NOV." docType="treatment" docVersion="4" lastPageNumber="2830" masterDocId="FFB0FFF2FF8D2171D937FF96FFAF6267" masterDocTitle="A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae" masterLastPageNumber="2858" masterPageNumber="2782" pageNumber="2830" updateTime="1699295455673" updateUser="plazi">
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<mods:title id="010896385CF694DC402C4E107D84CFEE">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="705516C7CC74AC7F9FA1D6B797A8A781">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="9D31CF3AD8AD5EEDFFEFB75B29A6AADB">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="7952154BCC692E7AA7B4295995589381">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="2DD829A14FC6C5E90731C94C3A579F92">Franz, Charles M. A. P.</mods:namePart>
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<mods:namePart id="2A0DCC6C09CCEF97B12F9B415EA69199">Harris, Hugh M. B.</mods:namePart>
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<mods:namePart id="BB2A26FF72FB69A16CDDB3F658695D4D">Mattarelli, Paola</mods:namePart>
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<mods:namePart id="AD188A6758E21711E0B6071378930166">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="7432830992AE0E095660DA63369A0E5E">Pot, Bruno</mods:namePart>
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<mods:namePart id="6007C13866BB02E717905E0C1D295A3E">Vandamme, Peter</mods:namePart>
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<mods:namePart id="571A56D421289078E3E9E9CFF7D3616C">Walter, Jens</mods:namePart>
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<mods:namePart id="9BA8C9DE5B6BDD1AFFE45F3BC1C1D46D">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="19687C1874DE1CEA5CAA30EDD56AD2B7">Wuyts, Sander</mods:namePart>
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<mods:namePart id="BC4BE79ABC5370EE58FC8EC6DD405276">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="5042306ECAA9A33D9B15372705633556">Gänzle, Michael G.</mods:namePart>
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<mods:namePart id="69FC8B2B8E59402B83876D28EE568A53">Lebeer, Sarah</mods:namePart>
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<mods:title id="D8ACF88F880D8C72B92293D8E0AC7C79">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="360514D8EF869DD58D8521DFBF1A1EFF">
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<mods:date id="8295CB744C5B75FC9054915E0AF3E678">2020</mods:date>
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<mods:number id="20C7D615B82DD85C4DD3EE70C1C06EB6">2020-04-01</mods:number>
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<mods:number id="705F096C73293171325FB83A87AB1B5D">70</mods:number>
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<treatment id="0389878AFFBD2141DA0BFC39FA9967A5" ID-DOI="http://doi.org/10.5281/zenodo.6309942" ID-Zenodo-Dep="6309942" LSID="urn:lsid:plazi:treatment:0389878AFFBD2141DA0BFC39FA9967A5" httpUri="http://treatment.plazi.org/id/0389878AFFBD2141DA0BFC39FA9967A5" lastPageNumber="2830" pageId="48" pageNumber="2830">
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<subSubSection id="C33A6517FFBD2141DA0BFC39FB676195" pageId="48" pageNumber="2830" type="nomenclature">
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<paragraph id="8B9F369CFFBD2141DA0BFC39FB676195" blockId="48.[828,1473,943,1475]" pageId="48" pageNumber="2830">
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<heading id="D0D781F0FFBD2141DA0BFC39FB676195" allCaps="true" bold="true" fontSize="12" level="2" pageId="48" pageNumber="2830" reason="3">
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<emphasis id="B954EA8EFFBD2141DA0BFC39FB676195" bold="true" pageId="48" pageNumber="2830">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFFBD2141DD02FC39FBB46195" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Paucilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="48" pageNumber="2830" phylum="Firmicutes" rank="species" species="wasatchensis" status="comb. nov.">
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<emphasis id="B954EA8EFFBD2141DD02FC39FBB46195" bold="true" italics="true" pageId="48" pageNumber="2830">PAUCILACTOBACILLUS WASATCHENSIS</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A26757F5FFBD2141DD14FC43FB676195" box="[1059,1224,981,1010]" pageId="48" pageNumber="2830" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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<subSubSection id="C33A6517FFBD2141DA0BFC68FBDF6633" pageId="48" pageNumber="2830" type="etymology">
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<paragraph id="8B9F369CFFBD2141DA0BFC68FBDF6633" blockId="48.[828,1473,943,1475]" pageId="48" pageNumber="2830">
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<taxonomicName id="4C204D1FFFBD2141DA0BFC68FB246671" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[828,1163,1022,1046]" class="Bacilli" family="Lactobacillaceae" genus="Paucilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="48" pageNumber="2830" phylum="Firmicutes" rank="species" species="wasatchensis">
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<emphasis id="B954EA8EFFBD2141DA0BFC68FB246671" box="[828,1163,1022,1046]" italics="true" pageId="48" pageNumber="2830">Paucilactobacillus wasatchensis</emphasis>
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</taxonomicName>
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(
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<materialsCitation id="3B483CC1FFBD2141DDAAFC69FBC26633" collectorName="Nguyen L-T" country="United States of America" location="Wasatch mountains" pageId="48" pageNumber="2830" specimenCount="1" stateProvince="Utah">
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wa.satch.en’sis.
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<collectorName id="26D5534AFFBD2141DC72FC69FADA6671" box="[1349,1397,1023,1046]" name="Nguyen L-T" pageId="48" pageNumber="2830">N.L.</collectorName>
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masc. adj.
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<taxonomicName id="4C204D1FFFBD2141DA5DFB8BFC5E6652" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[874,1009,1053,1077]" class="Bacilli" family="Lactobacillaceae" genus="Paucilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="48" pageNumber="2830" phylum="Firmicutes" rank="species" species="wasatchensis">
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<emphasis id="B954EA8EFFBD2141DA5DFB8BFC5E6652" box="[874,1009,1053,1077]" italics="true" pageId="48" pageNumber="2830">wasatchensis</emphasis>
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</taxonomicName>
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of the
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<location id="8EFF6047FFBD2141DD76FB8BFAB76652" LSID="urn:lsid:plazi:treatment:0389878AFFBD2141DA0BFC39FA9967A5:8EFF6047FFBD2141DD76FB8BFAB76652" box="[1089,1304,1053,1077]" country="United States of America" name="Wasatch mountains" pageId="48" pageNumber="2830" stateProvince="Utah">Wasatch mountains</location>
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in
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<collectingRegion id="49E4F87EFFBD2141DC0AFB8BFADA6652" box="[1341,1397,1053,1077]" country="United States of America" name="Utah" pageId="48" pageNumber="2830">Utah</collectingRegion>
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,
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<collectingCountry id="F337760CFFBD2141DCB6FB8BFA186652" box="[1409,1463,1053,1077]" name="United States of America" pageId="48" pageNumber="2830">USA</collectingCountry>
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, the origin of the
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<typeStatus id="549B883EFFBD2141DAD8FBAAFBB26633" box="[1007,1053,1084,1108]" pageId="48" pageNumber="2830">type</typeStatus>
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strain)
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFBD2141DA0BFBFCFAD9675E" pageId="48" pageNumber="2830" type="description">
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<paragraph id="8B9F369CFFBD2141DA0BFBFCFA146611" blockId="48.[828,1473,943,1475]" box="[828,1467,1128,1154]" pageId="48" pageNumber="2830">
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Basonym:
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<taxonomicName id="4C204D1FFFBD2141DA9DFBFFFAD866E6" authority="Oberg et al. 2016" authorityName="Oberg" authorityYear="2016" box="[938,1399,1129,1153]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="48" pageNumber="2830" phylum="Firmicutes" rank="species" species="wasatchensis">
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<emphasis id="B954EA8EFFBD2141DA9DFBFFFB1166E6" box="[938,1214,1129,1153]" italics="true" pageId="48" pageNumber="2830">Lactobacillus wasatchensis</emphasis>
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Oberg
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<emphasis id="B954EA8EFFBD2141DC3CFBFCFA9966E6" box="[1291,1334,1129,1153]" italics="true" pageId="48" pageNumber="2830">et al</emphasis>
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. 2016
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</taxonomicName>
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||
, 163
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<superScript id="7C559BD4FFBD2141DC90FBFEFA146611" attach="right" box="[1447,1467,1128,1142]" fontSize="6" pageId="48" pageNumber="2830">VP</superScript>
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</paragraph>
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<paragraph id="8B9F369CFFBD2141DA0BFB01FC4F676C" blockId="48.[828,1473,943,1475]" pageId="48" pageNumber="2830">
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Growth is observed at 30 and 37°C but not at 45 °C. In MRS, only ribose and galactose are fermented [
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<bibRefCitation id="EFB14B6DFFBD2141DDC0FB20FA8B66A9" author="Oberg CJ & Oberg TS & Culumber MD & Ortakci F & Broadbent JR" box="[1271,1316,1206,1230]" pageId="48" pageNumber="2830" pagination="158 - 164" refId="ref70895" refString="251. Oberg CJ, Oberg TS, Culumber MD, Ortakci F, Broadbent JR et al. Lactobacillus wasatchensis sp. nov., a non-starter lactic acid bacteria isolated from aged Cheddar cheese. Int J Syst Evol Microbiol 2016; 66: 158 - 164." type="journal article" year="2016">251</bibRefCitation>
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]. The genome size of the
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<typeStatus id="549B883EFFBD2141DA86FB43FC70668A" box="[945,991,1237,1261]" pageId="48" pageNumber="2830">type</typeStatus>
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strain is 1.90 Mbp. The mol% G+C content of DNA is 39.8.
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</paragraph>
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<paragraph id="8B9F369CFFBD2141DA0BFAB7FAD9675E" blockId="48.[828,1473,943,1475]" box="[828,1398,1313,1337]" pageId="48" pageNumber="2830">Isolated from spoiled cheddar cheese and from silage.</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFBD2141DA0BFAD9FA096701" box="[828,1446,1358,1383]" pageId="48" pageNumber="2830" type="materials_examined">
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<paragraph id="8B9F369CFFBD2141DA0BFAD9FA096701" blockId="48.[828,1473,943,1475]" box="[828,1446,1358,1383]" pageId="48" pageNumber="2830">
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The
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strain is WDC04
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29958
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<collectionCode id="ED31AE59FFBD2141DC2EFAD9FAFD6700" box="[1305,1362,1359,1383]" country="Belgium" httpUri="http://grbio.org/cool/0fkg-rcci" name="Belgian Coordinated Collections of Microorganisms/ LMG Bacteria Collection" pageId="48" pageNumber="2830">LMG</collectionCode>
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28678
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.
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<subSubSection id="C33A6517FFBD2141DA0BFAEBFA9967A5" pageId="48" pageNumber="2830" type="description">
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<paragraph id="8B9F369CFFBD2141DA0BFAEBFA2567F2" blockId="48.[828,1473,943,1475]" box="[828,1418,1405,1429]" pageId="48" pageNumber="2830">Genome sequence accession number: AWTT00000000.</paragraph>
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