449 lines
47 KiB
XML
449 lines
47 KiB
XML
<document id="F95EC6D59EDD844CC180C7E929E0A5D8" ID-DOI="10.11646/phytotaxa.520.2.5" ID-ISSN="1179-3163" ID-Zenodo-Dep="5508901" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1631692311024" checkinUser="plazi" docAuthor="Poursafar, Alireza, Hashemlou, Esmaeil, Ghosta, Youbert, Salimi, Fatemeh & Javan-Nikkhah, Mohammad" docDate="2021" docId="03B787B7FFB2CF08FF4B67284B09FC58" docLanguage="en" docName="phytotaxa.520.2.5.pdf" docOrigin="Phytotaxa 520 (2)" docSource="http://dx.doi.org/10.11646/phytotaxa.520.2.5" docStyle="DocumentStyle:96748F8F1B6C902996E134952A3A36B9.7:Phytotaxa.2014-.journal_article" docStyleId="96748F8F1B6C902996E134952A3A36B9" docStyleName="Phytotaxa.2014-.journal_article" docStyleVersion="7" docTitle="Alternaria guilanica Poursafar, Hashemlou, Ghosta, Salimi & Jav." docType="treatment" docVersion="4" lastPageNumber="190" masterDocId="FF8EFFCFFFB1CF0EFFC3621C485CFFD1" masterDocTitle="Alternaria guilanica sp. nov., a new fungal pathogen causing leaf spot and blight on eggplant in Iran" masterLastPageNumber="194" masterPageNumber="184" pageNumber="187" updateTime="1699414521526" updateUser="plazi" zenodo-license-figures="UNSPECIFIED" zenodo-license-treatments="UNSPECIFIED">
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<mods:title id="5F27027A8D32BA425EE7ED33E370F03E">Alternaria guilanica sp. nov., a new fungal pathogen causing leaf spot and blight on eggplant in Iran</mods:title>
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<mods:name id="87D21040471CCA44B66B4F76D12CAA3B" type="personal">
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<mods:roleTerm id="DA36B530D6EC804DA015641F6C177BD6">Author</mods:roleTerm>
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<mods:namePart id="FDD8B1F345D9E7A6A0EC8352097D1ED0">Poursafar, Alireza</mods:namePart>
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<mods:nameIdentifier id="FA9396627A21BF6C262623AF4432E5C8" type="ORCID">0000-0002-4296-8197</mods:nameIdentifier>
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<mods:affiliation id="D14C407A3A0BDB2D211AF1B45C304725">Department of Plant Protection, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran. & Department of Plant Pathology, North Dakota State University, Fargo, North Dakota, USA. & a. rezapoursafar @ gmail. com; https: // orcid. org / 0000 - 0002 - 4296 - 8197</mods:affiliation>
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<mods:nameIdentifier id="8ED07D2107CFC70A53CA647982354ED5" type="email">a.rezapoursafar@gmail.com</mods:nameIdentifier>
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<mods:roleTerm id="8E270E6F43F2C92BE37B222DC26DBAF9">Author</mods:roleTerm>
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<mods:namePart id="4E7F1B6DF96EB5BEA0185C3838874CE0">Hashemlou, Esmaeil</mods:namePart>
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<mods:nameIdentifier id="410FD42B72CCB51EF0EE9F481D8CCB68" type="ORCID">0000-0002-9129-9778</mods:nameIdentifier>
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<mods:affiliation id="B5E5627ABE1833FE57725389023F4EEB">Department of Plant Protection, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran. & ehashemlou @ gmail. com; https: // orcid. org / 0000 - 0002 - 9129 - 9778</mods:affiliation>
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<mods:nameIdentifier id="36042E5DF2C8CDF43AD4FBFC1E57FAE7" type="email">ehashemlou@gmail.com</mods:nameIdentifier>
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<mods:roleTerm id="ACBCBEC42F883D0736F8404BAFFB5274">Author</mods:roleTerm>
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<mods:namePart id="C1D736EB1F50E544A62435BDEC4C2AD8">Ghosta, Youbert</mods:namePart>
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<mods:nameIdentifier id="6ACB059A6D44B71BB4372DF80AE7AE2F" type="ORCID">0000-0003-4038-2448</mods:nameIdentifier>
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<mods:affiliation id="DDEB3AA6B6453A9EDF630F7A09E76149">Department of Plant Protection, Faculty of Agriculture, Urmia University, Urmia, Iran. & y. ghoosta @ urmia. ac. ir; https: // orcid. org / 0000 - 0003 - 4038 - 2448</mods:affiliation>
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<mods:nameIdentifier id="077AAAE5FE21A24ED7E273700B87B97E" type="email">y.ghoosta@urmia.ac.ir</mods:nameIdentifier>
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<mods:roleTerm id="A3DEFE100CA0402F6F832E4BDD062462">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="EE0BF3658E84569A6BFB8ABE80D43C4A">Salimi, Fatemeh</mods:namePart>
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<mods:nameIdentifier id="4FDC1A7C1E2FBC1F669125414538F9ED" type="ORCID">0000-0001-8371-0734</mods:nameIdentifier>
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<mods:affiliation id="9812CDC89E72EB83A382BA6B426D8F81">Department of Plant Protection, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran. & fatemeh. salimi @ ut. ac. ir; https: // orcid. org / 0000 - 0001 - 8371 - 0734</mods:affiliation>
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<mods:nameIdentifier id="B67098AE737C993CAFA0C9EED5C625F2" type="email">fatemeh.salimi@ut.ac.ir</mods:nameIdentifier>
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</mods:role>
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<mods:namePart id="CE2DFB148F62BD60A27D64DE69081045">Javan-Nikkhah, Mohammad</mods:namePart>
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<mods:nameIdentifier id="AE737B54B2B571FD5E64009A9797759A" type="ORCID">0000-0001-9533-0157</mods:nameIdentifier>
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<mods:affiliation id="269F3645BCC5B22F96390F35111AB648">Department of Plant Protection, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran. & jnikkhah @ ut. ac. ir; https: // orcid. org / 0000 - 0001 - 9533 - 0157</mods:affiliation>
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<mods:nameIdentifier id="AFAF53ADBE24D5B4A50D991045B64B2A" type="email">jnikkhah@ut.ac.ir</mods:nameIdentifier>
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<mods:title id="5C1A50D3DFF2812D1254DA1AC3378BF6">Phytotaxa</mods:title>
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<mods:part id="2ECC9497480ED4F59F668ABB32AA04C9">
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<mods:date id="FE7FB41E571F3E1D40D313FAFC0F053C">2021</mods:date>
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<mods:number id="23979FDEC4ED8951CC2CAF1C690E2F56">2021-09-15</mods:number>
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<mods:number id="E82C9C502D6438FF8DD085D16DA363CD">520</mods:number>
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<mods:start id="1F8610A549DE54BA0D56C81DFA62EED0">184</mods:start>
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<mods:end id="1CB26D28BE56FA9A11790A1D62A09A42">194</mods:end>
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<mods:url id="7407EC78D86A9E22D073F4702ECE20C4">http://dx.doi.org/10.11646/phytotaxa.520.2.5</mods:url>
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<mods:classification id="705203754C0DCB531EF28CA4E6A4159C">journal article</mods:classification>
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<mods:identifier id="DCF4FF1D923131F62F23551326426AEA" type="DOI">10.11646/phytotaxa.520.2.5</mods:identifier>
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<mods:identifier id="C5861EB33CACDF440ADDDD92E474231C" type="ISSN">1179-3163</mods:identifier>
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<mods:identifier id="8668A8ABE3DCE8E18947636389F3EEE6" type="Zenodo-Dep">5508901</mods:identifier>
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<subSubSection id="C304652AFFB2CF0DFF4B67284CECFA9F" box="[136,1200,1332,1359]" pageId="3" pageNumber="187" type="nomenclature">
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<paragraph id="8BA136A1FFB2CF0DFF4B67284CECFA9F" blockId="3.[136,1200,1332,1359]" box="[136,1200,1332,1359]" pageId="3" pageNumber="187">
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<heading id="D0E981CDFFB2CF0DFF4B67284CECFA9F" box="[136,1200,1332,1359]" fontSize="11" level="2" pageId="3" pageNumber="187" reason="3">
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<taxonomicName id="4C1E4D22FFB2CF0DFF4B67284B2AFA9F" ID-CoL="9YMYQ" authority="Poursafar, Hashemlou, Ghosta, Salimi & Jav." authorityName="Poursafar, Hashemlou, Ghosta, Salimi & Jav." box="[136,886,1332,1359]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="3" pageNumber="187" phylum="Ascomycota" rank="species" species="guilanica">
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<emphasis id="B96AEAB3FFB2CF0DFF4B67284928FA9E" bold="true" box="[136,372,1332,1359]" italics="true" pageId="3" pageNumber="187">Alternaria guilanica</emphasis>
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Poursafar, Hashemlou, Ghosta, Salimi & Jav.
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</taxonomicName>
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-Nikkh.,
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<emphasis id="B96AEAB3FFB2CF0DFC1967294C72FA9F" box="[986,1070,1333,1358]" italics="true" pageId="3" pageNumber="187">sp. nov.</emphasis>
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(
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<figureCitation id="13252A24FFB2CF0DFBFE67284CD6FA9F" box="[1085,1162,1332,1358]" captionStart="FIGURE 1" captionStartId="4.[136,229,1928,1950]" captionTargetBox="[184,1418,265,1885]" captionTargetId="figure-50@4.[151,1436,245,1903]" captionTargetPageId="4" captionText="FIGURE 1. Phylogenetic tree generated from Bayesian Inference (BI) based on the combined dataset of ITS-rDNA, GAPDH, RPB2, TEF1-α and Alt a 1 for 44 Alternaria strains. The Bayesian posterior probabilities (>0.75) and RAxML Maximum likelihood and Maximum parsimony bootstrap values (>50%) are given at the nodes (PP/ML/MP). The tree was rooted to A. gypsophilae CBS 107.41 and A. vaccariae CBS 116533 (Alternaria sect. Gypsophilae) and the newly identified strains are in bold." figureDoi="http://doi.org/10.5281/zenodo.5508903" httpUri="https://zenodo.org/record/5508903/files/figure.png" pageId="3" pageNumber="187">Figs. 1</figureCitation>
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,
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<figureCitation id="13252A24FFB2CF0DFB5B67284CFBFA9F" box="[1176,1191,1332,1358]" captionStart="FIGURE 2" captionStartId="5.[136,229,1947,1969]" captionTargetBox="[167,1426,215,1906]" captionTargetId="figure-23@5.[151,1436,190,1923]" captionTargetPageId="5" captionText="FIGURE 2. Alternaria guilanica (IRAN 4220C). a. Colony on V8-A after 7 days. b–c. sporulation pattern on V8-A. d–f. Conidiophores. g–x. conidia. Bars = 20 μm." figureDoi="http://doi.org/10.5281/zenodo.5508905" httpUri="https://zenodo.org/record/5508905/files/figure.png" pageId="3" pageNumber="187">2</figureCitation>
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)
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C304652AFFB2CF08FF7E67444B09FC58" lastPageId="6" lastPageNumber="190" pageId="3" pageNumber="187" type="etymology">
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<paragraph id="8BA136A1FFB2CF0DFF7E67444C11FAA3" blockId="3.[136,1452,1368,2079]" box="[189,1101,1368,1395]" pageId="3" pageNumber="187">
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<emphasis id="B96AEAB3FFB2CF0DFF7E67444969FAA3" box="[189,309,1368,1394]" italics="true" pageId="3" pageNumber="187">Etymology</emphasis>
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: referring to the Iranian province from where the species was isolated.
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</paragraph>
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<paragraph id="8BA136A1FFB2CF0DFF7E67604990FA47" blockId="3.[136,1452,1368,2079]" box="[189,460,1404,1431]" pageId="3" pageNumber="187">
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<emphasis id="B96AEAB3FFB2CF0DFF7E67604961FA47" bold="true" box="[189,317,1404,1430]" pageId="3" pageNumber="187">Mycobank</emphasis>
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: MB838043
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</paragraph>
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<paragraph id="8BA136A1FFB2CF0DFF7E67BD489DF82A" blockId="3.[136,1452,1368,2079]" pageId="3" pageNumber="187">
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<emphasis id="B96AEAB3FFB2CF0DFF7E67BD491DFA6B" box="[189,321,1441,1466]" italics="true" pageId="3" pageNumber="187">Description</emphasis>
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:
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<emphasis id="B96AEAB3FFB2CF0DFE9067BC49EBFA6B" box="[339,439,1440,1466]" italics="true" pageId="3" pageNumber="187">Colonies</emphasis>
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on V8-A dark bluish green with off-white aerial mycelium, grey olivaceous at center with age, fast growing,
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<quantity id="4CE69B44FFB2CF0DFE5767D849B8FA0E" box="[404,484,1476,1503]" metricMagnitude="-2" metricUnit="m" metricValue="7.5" pageId="3" pageNumber="187" unit="mm" value="75.0">75 mm</quantity>
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diam. after 7 days at 25ºC, loose cottony without conspicuous concentric zonation of growth and sporulation (
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<figureCitation id="13252A24FFB2CF0DFE5D67F449ADF9D3" box="[414,497,1512,1538]" captionStart="FIGURE 2" captionStartId="5.[136,229,1947,1969]" captionTargetBox="[167,1426,215,1906]" captionTargetId="figure-23@5.[151,1436,190,1923]" captionTargetPageId="5" captionText="FIGURE 2. Alternaria guilanica (IRAN 4220C). a. Colony on V8-A after 7 days. b–c. sporulation pattern on V8-A. d–f. Conidiophores. g–x. conidia. Bars = 20 μm." figureDoi="http://doi.org/10.5281/zenodo.5508905" httpUri="https://zenodo.org/record/5508905/files/figure.png" pageId="3" pageNumber="187">Fig. 2a</figureCitation>
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).
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<emphasis id="B96AEAB3FFB2CF0DFDC567F44A01F9D3" box="[518,605,1512,1538]" italics="true" pageId="3" pageNumber="187">Hyphae</emphasis>
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branched, septate, smooth or occasionally granular, hyaline to light brown to brown, superficial or submerged, 5–7.5 μm wide.
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<emphasis id="B96AEAB3FFB2CF0DFD2364104B38F9F7" box="[736,868,1548,1574]" italics="true" pageId="3" pageNumber="187">Sporulation</emphasis>
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abundant, both from aerial hyphae or from hyphae growing directly on the agar surface (
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<figureCitation id="13252A24FFB2CF0DFDF3642C4AFDF99A" box="[560,673,1584,1611]" captionStart="FIGURE 2" captionStartId="5.[136,229,1947,1969]" captionTargetBox="[167,1426,215,1906]" captionTargetId="figure-23@5.[151,1436,190,1923]" captionTargetPageId="5" captionText="FIGURE 2. Alternaria guilanica (IRAN 4220C). a. Colony on V8-A after 7 days. b–c. sporulation pattern on V8-A. d–f. Conidiophores. g–x. conidia. Bars = 20 μm." figureDoi="http://doi.org/10.5281/zenodo.5508905" httpUri="https://zenodo.org/record/5508905/files/figure.png" pageId="3" pageNumber="187">Fig. 2b–c</figureCitation>
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||
).
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<emphasis id="B96AEAB3FFB2CF0DFD77642C4B05F99B" box="[692,857,1584,1610]" italics="true" pageId="3" pageNumber="187">Conidiophores</emphasis>
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macronematous, solitary, straight or slightly curved, unbranched, septate, golden yellow to light brown to brown, 55–150 × 5–6 μm, with one or rarely two conidiogenous loci. Sometimes, hyphae coil up and form a hyphal ring-like structure bearing 3–5 conidiophores resulting in aggregated sporulation appearance under the stereomicroscope vision (
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<figureCitation id="13252A24FFB2CF0DFC6A64804C4AF966" box="[937,1046,1692,1719]" captionStart="FIGURE 2" captionStartId="5.[136,229,1947,1969]" captionTargetBox="[167,1426,215,1906]" captionTargetId="figure-23@5.[151,1436,190,1923]" captionTargetPageId="5" captionText="FIGURE 2. Alternaria guilanica (IRAN 4220C). a. Colony on V8-A after 7 days. b–c. sporulation pattern on V8-A. d–f. Conidiophores. g–x. conidia. Bars = 20 μm." figureDoi="http://doi.org/10.5281/zenodo.5508905" httpUri="https://zenodo.org/record/5508905/files/figure.png" pageId="3" pageNumber="187">Fig. 2d–f</figureCitation>
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).
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<emphasis id="B96AEAB3FFB2CF0DFBE964804CD8F967" box="[1066,1156,1692,1718]" italics="true" pageId="3" pageNumber="187">Conidia</emphasis>
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enormous, solitary, rarely in a chain of two conidia, rostrate, straight or slightly curved, long narrow ellipsoid or mostly sub-cylindric, smooth or inconspicuously punctuate, golden to light brown to brown, with 5–11 (mostly 7–9) transverse disto- and eusepta, 0–3 longitudinal or oblique septa. Most conidia have only a single unbranched, hyaline, narrow-tapered beak, but rarely, the second shorter beak (10–80 µm in length) arise from the apical cell of the conidium. Mature conidium body reaches a size range of 50–135 × (10–)13–18(–20) μm. Beak length usually reaches into a range of (50–)70–180(–225) μm. Although the width of the base of the beak is
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<emphasis id="B96AEAB3FFB2CF0DFD7865694A89F85F" box="[699,725,1909,1934]" italics="true" pageId="3" pageNumber="187">ca</emphasis>
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5–8 μm, it narrows to tips
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<emphasis id="B96AEAB3FFB2CF0DFBC565694C7CF85F" box="[1030,1056,1909,1934]" italics="true" pageId="3" pageNumber="187">ca</emphasis>
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2.5 μm. As long as only distosepta are present, the conidium body wall has no lateral constrictions, however it becomes moderately or conspicuously constricted at sites where the thickened and darkened transverse eusepta are formed (
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<figureCitation id="13252A24FFB2CF0DFBF665A04CFFF807" box="[1077,1187,1980,2006]" captionStart="FIGURE 2" captionStartId="5.[136,229,1947,1969]" captionTargetBox="[167,1426,215,1906]" captionTargetId="figure-23@5.[151,1436,190,1923]" captionTargetPageId="5" captionText="FIGURE 2. Alternaria guilanica (IRAN 4220C). a. Colony on V8-A after 7 days. b–c. sporulation pattern on V8-A. d–f. Conidiophores. g–x. conidia. Bars = 20 μm." figureDoi="http://doi.org/10.5281/zenodo.5508905" httpUri="https://zenodo.org/record/5508905/files/figure.png" pageId="3" pageNumber="187">
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Fig.
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–z
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</figureCitation>
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). Sexual morph was not seen.
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</paragraph>
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<paragraph id="8BA136A1FFB2CF0AFF7E6A184DDDFF0D" blockId="3.[136,1452,1368,2079]" lastBlockId="4.[136,1452,158,221]" lastPageId="4" lastPageNumber="188" pageId="3" pageNumber="187">
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<emphasis id="B96AEAB3FFB2CF0DFF7E6A18491EF7CF" box="[189,322,2052,2078]" italics="true" pageId="3" pageNumber="187">Typification</emphasis>
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:
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<materialsCitation id="3B763CFCFFB2CF0AFE9B6A184AAEFF69" collectingDate="2019-07-12" collectionCode="M" country="Iran" lastPageId="4" lastPageNumber="188" location="Somehsara region" pageId="3" pageNumber="187" specimenCount="1" stateProvince="Gilan" typeStatus="holotype">
|
||
<collectingCountry id="F3097631FFB2CF0DFE9B6A1849C3F7CF" box="[344,415,2052,2078]" name="Iran" pageId="3" pageNumber="187">IRAN</collectingCountry>
|
||
,
|
||
<collectingRegion id="49DAF843FFB2CF0DFE736A184A32F7CF" box="[432,622,2052,2078]" country="Iran" name="Gilan" pageId="3" pageNumber="187">Guilan province</collectingRegion>
|
||
,
|
||
<location id="8EC1607AFFB2CF0DFDBC6A184B0DF7CF" LSID="urn:lsid:plazi:treatment:03B787B7FFB2CF08FF4B67284B09FC58:8EC1607AFFB2CF0DFDBC6A184B0DF7CF" box="[639,849,2052,2078]" country="Iran" name="Somehsara region" pageId="3" pageNumber="187" stateProvince="Gilan">Somehsara region</location>
|
||
,
|
||
<collectedFrom id="3802755CFFB2CF0DFCA06A194C2AF7CF" box="[867,1142,2052,2079]" pageId="3" pageNumber="187">
|
||
on
|
||
<taxonomicName id="4C1E4D22FFB2CF0DFC4F6A184C2AF7CF" box="[908,1142,2052,2078]" class="Magnoliopsida" family="Solanaceae" genus="Solanum" kingdom="Plantae" order="Solanales" pageId="3" pageNumber="187" phylum="Tracheophyta" rank="species" species="melongena">
|
||
<emphasis id="B96AEAB3FFB2CF0DFC4F6A184C2AF7CF" box="[908,1142,2052,2078]" italics="true" pageId="3" pageNumber="187">Solanum melongena</emphasis>
|
||
</taxonomicName>
|
||
</collectedFrom>
|
||
with leaf spot and blight symptoms,
|
||
<date id="FFA01061FFB5CF0AFECF628249C3FF69" box="[268,415,158,184]" pageId="4" pageNumber="188" value="2019-07-12">
|
||
<collectingDate id="EFE4E989FFB5CF0AFECF628249C3FF69" box="[268,415,158,184]" pageId="4" pageNumber="188" value="2019-07-12">12 Jul. 2019</collectingDate>
|
||
</date>
|
||
.
|
||
<collectionCode id="ED0FAE64FFB5CF0AFE6F62834994FF68" box="[428,456,159,185]" country="Germany" lsid="urn:lsid:biocol.org:col:15637" name="Botanische Staatssammlung München" pageId="4" pageNumber="188" type="Herbarium">M</collectionCode>
|
||
. Javan-Nikkhah,
|
||
<typeStatus id="54A58803FFB5CF0AFD5362824AAEFF69" box="[656,754,158,184]" pageId="4" pageNumber="188" type="holotype">holotype</typeStatus>
|
||
</materialsCitation>
|
||
<materialsCitation id="3B763CFCFFB5CF0AFD3F62824CD0FF69" box="[764,1164,158,184]" collectionCode="F" country="Iran" location="IRAN" pageId="4" pageNumber="188" specimenCount="1" typeStatus="holotype">
|
||
<collectingCountry id="F3097631FFB5CF0AFD3F62824B1CFF69" box="[764,832,158,184]" name="Iran" pageId="4" pageNumber="188">IRAN</collectingCountry>
|
||
18093
|
||
<collectionCode id="ED0FAE64FFB5CF0AFC5362824BFCFF69" box="[912,928,158,184]" country="USA" lsid="urn:lsid:biocol.org:col:15707" name="Field Museum of Natural History, Botany Department" pageId="4" pageNumber="188" type="Herbarium">F</collectionCode>
|
||
, ex-holotype culture
|
||
</materialsCitation>
|
||
<materialsCitation id="3B763CFCFFB5CF0AFB5562824D26FF0C" accessionNumber="MT782297, MT786491, MT786497, MT786500, MT786494" collectionCode="C, MT, GAPDH" country="Iran" location="IRAN" pageId="4" pageNumber="188" specimenCode="RPB2, TEF1" specimenCount="1" typeStatus="holotype">
|
||
<collectingCountry id="F3097631FFB5CF0AFB5562824C86FF69" box="[1174,1242,158,184]" name="Iran" pageId="4" pageNumber="188">IRAN</collectingCountry>
|
||
4220
|
||
<collectionCode id="ED0FAE64FFB5CF0AFADE62824D73FF69" box="[1309,1327,158,184]" country="Denmark" name="University of Copenhagen" pageId="4" pageNumber="188" type="Herbarium">C</collectionCode>
|
||
(GenBank accessions:
|
||
<accessionNumber id="944DAB42FFB5CF0AFECE62DE49D2FF0D" box="[269,398,194,220]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT782297" pageId="4" pageNumber="188">
|
||
<collectionCode id="ED0FAE64FFB5CF0AFECE62DE4964FF0D" box="[269,312,194,220]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="4" pageNumber="188">MT</collectionCode>
|
||
782297
|
||
</accessionNumber>
|
||
, ITS;
|
||
<accessionNumber id="944DAB42FFB5CF0AFE1162DE4A0FFF0D" box="[466,595,194,220]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786491" pageId="4" pageNumber="188">
|
||
<collectionCode id="ED0FAE64FFB5CF0AFE1162DE49A1FF0D" box="[466,509,194,220]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="4" pageNumber="188">MT</collectionCode>
|
||
786491
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB5CF0AFD9D62DF4AE1FF0C" box="[606,701,195,221]" italics="true" pageId="4" pageNumber="188">
|
||
<collectionCode id="ED0FAE64FFB5CF0AFD9D62DF4AE1FF0C" box="[606,701,195,221]" pageId="4" pageNumber="188">GAPDH</collectionCode>
|
||
</emphasis>
|
||
;
|
||
<accessionNumber id="944DAB42FFB5CF0AFD0862DE4B10FF0D" box="[715,844,194,220]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786497" pageId="4" pageNumber="188">
|
||
<collectionCode id="ED0FAE64FFB5CF0AFD0862DE4AAAFF0D" box="[715,758,194,220]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="4" pageNumber="188">MT</collectionCode>
|
||
786497
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB5CF0AFC9462DE4BC5FF0D" box="[855,921,194,220]" italics="true" pageId="4" pageNumber="188">
|
||
<specimenCode id="DBB89EDAFFB5CF0AFC9462DE4BC5FF0D" box="[855,921,194,220]" collectionCode="RPB" pageId="4" pageNumber="188">RPB2</specimenCode>
|
||
</emphasis>
|
||
;
|
||
<accessionNumber id="944DAB42FFB5CF0AFC6B62DE4C74FF0C" box="[936,1064,194,221]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786500" pageId="4" pageNumber="188">
|
||
<collectionCode id="ED0FAE64FFB5CF0AFC6B62DE4B8FFF0C" box="[936,979,194,221]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="4" pageNumber="188">MT</collectionCode>
|
||
786500
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB5CF0AFBF762DE4CD7FF0D" box="[1076,1163,194,220]" italics="true" pageId="4" pageNumber="188">
|
||
<specimenCode id="DBB89EDAFFB5CF0AFBF762DE4C28FF0D" box="[1076,1140,194,220]" collectionCode="TEF" country="Madagascar" httpUri="http://biocol.org/urn:lsid:biocol.org:col:12774" lsid="urn:lsid:biocol.org:col:12774" name="Centre National de la Recherche Appliquée au Developement Rural" pageId="4" pageNumber="188" type="Herbarium">TEF1</specimenCode>
|
||
-α
|
||
</emphasis>
|
||
;
|
||
<accessionNumber id="944DAB42FFB5CF0AFB5962DE4D47FF0D" box="[1178,1307,194,220]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786494" pageId="4" pageNumber="188">
|
||
<collectionCode id="ED0FAE64FFB5CF0AFB5962DE4C99FF0D" box="[1178,1221,194,220]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="4" pageNumber="188">MT</collectionCode>
|
||
786494
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB5CF0AFAE562DE4D2DFF0D" box="[1318,1393,194,220]" italics="true" pageId="4" pageNumber="188">Alt a 1</emphasis>
|
||
)
|
||
</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
<caption id="DF616629FFB5CF0AFF4B65944C20F7DB" ID-DOI="http://doi.org/10.5281/zenodo.5508903" ID-Zenodo-Dep="5508903" httpUri="https://zenodo.org/record/5508903/files/figure.png" pageId="4" pageNumber="188" startId="4.[136,229,1928,1950]" targetBox="[184,1418,265,1885]" targetPageId="4">
|
||
<paragraph id="8BA136A1FFB5CF0AFF4B65944C20F7DB" blockId="4.[136,1452,1928,2058]" pageId="4" pageNumber="188">
|
||
<emphasis id="B96AEAB3FFB5CF0AFF4B659448A5F84C" bold="true" box="[136,249,1928,1950]" pageId="4" pageNumber="188">FIGURE 1</emphasis>
|
||
. Phylogenetic tree generated from Bayesian Inference (BI) based on the combined dataset of ITS-rDNA,
|
||
<emphasis id="B96AEAB3FFB5CF0AFACD65954D03F84F" box="[1294,1375,1929,1950]" italics="true" pageId="4" pageNumber="188">GAPDH</emphasis>
|
||
,
|
||
<emphasis id="B96AEAB3FFB5CF0AFAAE6594488FF810" italics="true" pageId="4" pageNumber="188">RPB2, TEF1-α</emphasis>
|
||
and
|
||
<emphasis id="B96AEAB3FFB5CF0AFEC965B0490FF810" box="[266,339,1964,1986]" italics="true" pageId="4" pageNumber="188">Alt a 1</emphasis>
|
||
for 44
|
||
<taxonomicName id="4C1E4D22FFB5CF0AFE6565B04A56F810" box="[422,522,1964,1985]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="4" pageNumber="188" phylum="Ascomycota" rank="genus">
|
||
<emphasis id="B96AEAB3FFB5CF0AFE6565B04A56F810" box="[422,522,1964,1985]" italics="true" pageId="4" pageNumber="188">Alternaria</emphasis>
|
||
</taxonomicName>
|
||
strains. The Bayesian posterior probabilities (>0.75) and RAxML Maximum likelihood and Maximum parsimony bootstrap values (>50%) are given at the nodes (PP/ML/MP). The tree was rooted to
|
||
<taxonomicName id="4C1E4D22FFB5CF0AFB5D65CD4D3EF834" authority="CBS" authorityName="CBS" box="[1182,1378,2000,2022]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="4" pageNumber="188" phylum="Ascomycota" rank="species" species="gypsophilae">
|
||
<emphasis id="B96AEAB3FFB5CF0AFB5D65CD4D72F834" box="[1182,1326,2000,2022]" italics="true" pageId="4" pageNumber="188">A. gypsophilae</emphasis>
|
||
CBS
|
||
</taxonomicName>
|
||
107.41 and
|
||
<taxonomicName id="4C1E4D22FFB5CF0AFF7265E94901F7D8" authority="CBS" authorityName="CBS" box="[177,349,2036,2058]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="4" pageNumber="188" phylum="Ascomycota" rank="species" species="vaccariae">
|
||
<emphasis id="B96AEAB3FFB5CF0AFF7265E94976F7DB" box="[177,298,2037,2058]" italics="true" pageId="4" pageNumber="188">A. vaccariae</emphasis>
|
||
CBS
|
||
</taxonomicName>
|
||
116533 (
|
||
<taxonomicName id="4C1E4D22FFB5CF0AFE7B65E84A91F7D8" box="[440,717,2036,2058]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="4" pageNumber="188" phylum="Ascomycota" rank="section" section="Gypsophilae">
|
||
<emphasis id="B96AEAB3FFB5CF0AFE7B65E84A40F7D8" box="[440,540,2036,2057]" italics="true" pageId="4" pageNumber="188">Alternaria</emphasis>
|
||
sect.
|
||
<emphasis id="B96AEAB3FFB5CF0AFD9765E84A91F7D8" box="[596,717,2036,2057]" italics="true" pageId="4" pageNumber="188">Gypsophilae</emphasis>
|
||
</taxonomicName>
|
||
) and the newly identified strains are in bold.
|
||
</paragraph>
|
||
</caption>
|
||
<caption id="DF616629FFB4CF0BFF4B658749C9F804" ID-DOI="http://doi.org/10.5281/zenodo.5508905" ID-Zenodo-Dep="5508905" httpUri="https://zenodo.org/record/5508905/files/figure.png" pageId="5" pageNumber="189" startId="5.[136,229,1947,1969]" targetBox="[167,1426,215,1906]" targetPageId="5">
|
||
<paragraph id="8BA136A1FFB4CF0BFF4B658749C9F804" blockId="5.[136,1453,1947,2005]" pageId="5" pageNumber="189">
|
||
<emphasis id="B96AEAB3FFB4CF0BFF4B658748A2F861" bold="true" box="[136,254,1947,1969]" pageId="5" pageNumber="189">FIGURE 2.</emphasis>
|
||
<taxonomicName id="4C1E4D22FFB4CF0BFEC065874994F861" box="[259,456,1947,1968]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="5" pageNumber="189" phylum="Ascomycota" rank="species" species="guilanica">
|
||
<emphasis id="B96AEAB3FFB4CF0BFEC065874994F861" box="[259,456,1947,1968]" italics="true" pageId="5" pageNumber="189">Alternaria guilanica</emphasis>
|
||
</taxonomicName>
|
||
(IRAN 4220C). a. Colony on V8-A after 7 days. b–c. sporulation pattern on V8-A. d–f. Conidiophores. g–x. conidia. Bars = 20 μm.
|
||
</paragraph>
|
||
</caption>
|
||
<paragraph id="8BA136A1FFB7CF08FF7E62824DDDFEF5" blockId="6.[136,1452,158,653]" pageId="6" pageNumber="190">
|
||
<emphasis id="B96AEAB3FFB7CF08FF7E62824A79FF69" box="[189,549,158,184]" italics="true" pageId="6" pageNumber="190">Additional specimens examined</emphasis>
|
||
:
|
||
<materialsCitation id="3B763CFCFFB7CF08FDF462824B6AFF0D" collectingDate="2019-07-12" collectionCode="M" country="Iran" location="Somehsara region" pageId="6" pageNumber="190" specimenCount="1" stateProvince="Gilan">
|
||
<collectingCountry id="F3097631FFB7CF08FDF462824A22FF69" box="[567,638,158,184]" name="Iran" pageId="6" pageNumber="190">IRAN</collectingCountry>
|
||
,
|
||
<collectingRegion id="49DAF843FFB7CF08FD4F62824B1AFF69" box="[652,838,158,184]" country="Iran" name="Gilan" pageId="6" pageNumber="190">Guilan province</collectingRegion>
|
||
,
|
||
<location id="8EC1607AFFB7CF08FC9762824C7EFF69" LSID="urn:lsid:plazi:treatment:03B787B7FFB2CF08FF4B67284B09FC58:8EC1607AFFB7CF08FC9762824C7EFF69" box="[852,1058,158,184]" country="Iran" name="Somehsara region" pageId="6" pageNumber="190" stateProvince="Gilan">Somehsara region</location>
|
||
,
|
||
<collectedFrom id="3802755CFFB7CF08FBF362834D61FF69" box="[1072,1341,158,185]" pageId="6" pageNumber="190">
|
||
on
|
||
<taxonomicName id="4C1E4D22FFB7CF08FB9562824D61FF69" box="[1110,1341,158,184]" class="Magnoliopsida" family="Solanaceae" genus="Solanum" kingdom="Plantae" order="Solanales" pageId="6" pageNumber="190" phylum="Tracheophyta" rank="species" species="melongena">
|
||
<emphasis id="B96AEAB3FFB7CF08FB9562824D61FF69" box="[1110,1341,158,184]" italics="true" pageId="6" pageNumber="190">Solanum melongena</emphasis>
|
||
</taxonomicName>
|
||
</collectedFrom>
|
||
with leaf spot and blight symptoms,
|
||
<date id="FFA01061FFB7CF08FE0262DE4A08FF0D" box="[449,596,194,220]" pageId="6" pageNumber="190" value="2019-07-12">
|
||
<collectingDate id="EFE4E989FFB7CF08FE0262DE4A08FF0D" box="[449,596,194,220]" pageId="6" pageNumber="190" value="2019-07-12">12 Jul. 2019</collectingDate>
|
||
</date>
|
||
.
|
||
<collectionCode id="ED0FAE64FFB7CF08FDA262DF4A21FF0C" box="[609,637,195,221]" country="Germany" lsid="urn:lsid:biocol.org:col:15637" name="Botanische Staatssammlung München" pageId="6" pageNumber="190" type="Herbarium">M</collectionCode>
|
||
. Javan-Nikkhah
|
||
</materialsCitation>
|
||
,
|
||
<materialsCitation id="3B763CFCFFB7CF08FC8762DE4CD5FED1" accessionNumber="MT782298, MT786492, MT786498, MT786501, MT786495" collectionCode="C, MT, GAPDH" country="Iran" location="IRAN" pageId="6" pageNumber="190" specimenCode="RPB2, TEF1" specimenCount="1">
|
||
<collectingCountry id="F3097631FFB7CF08FC8762DE4BD4FF0D" box="[836,904,194,220]" name="Iran" pageId="6" pageNumber="190">IRAN</collectingCountry>
|
||
4221
|
||
<collectionCode id="ED0FAE64FFB7CF08FC0862DE4B81FF0D" box="[971,989,194,220]" country="Denmark" name="University of Copenhagen" pageId="6" pageNumber="190" type="Herbarium">C</collectionCode>
|
||
(GenBank accessions:
|
||
<accessionNumber id="944DAB42FFB7CF08FB2862DE4D30FF0D" box="[1259,1388,194,220]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT782298" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FB2862DE4D4AFF0D" box="[1259,1302,194,220]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
782298
|
||
</accessionNumber>
|
||
, ITS;
|
||
<accessionNumber id="944DAB42FFB7CF08FF4B62FA4955FED1" box="[136,265,230,256]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786492" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FF4B62FA48EFFED1" box="[136,179,230,256]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
786492
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB7CF08FEDB62FB492BFED0" box="[280,375,231,257]" italics="true" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FEDB62FB492BFED0" box="[280,375,231,257]" pageId="6" pageNumber="190">GAPDH</collectionCode>
|
||
</emphasis>
|
||
;
|
||
<accessionNumber id="944DAB42FFB7CF08FE4A62FA4A56FED1" box="[393,522,230,256]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786498" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FE4A62FA49E8FED1" box="[393,436,230,256]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
786498
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB7CF08FDDB62FA4A06FED1" box="[536,602,230,256]" italics="true" pageId="6" pageNumber="190">
|
||
<specimenCode id="DBB89EDAFFB7CF08FDDB62FA4A06FED1" box="[536,602,230,256]" collectionCode="RPB" pageId="6" pageNumber="190">RPB2</specimenCode>
|
||
</emphasis>
|
||
;
|
||
<accessionNumber id="944DAB42FFB7CF08FDAF62FA4AB1FED0" box="[620,749,230,257]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786501" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FDAF62FA4ACBFED0" box="[620,663,230,257]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
786501
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB7CF08FD3862FA4B0FFED1" box="[763,851,230,256]" italics="true" pageId="6" pageNumber="190">
|
||
<specimenCode id="DBB89EDAFFB7CF08FD3862FA4B67FED1" box="[763,827,230,256]" collectionCode="TEF" country="Madagascar" httpUri="http://biocol.org/urn:lsid:biocol.org:col:12774" lsid="urn:lsid:biocol.org:col:12774" name="Centre National de la Recherche Appliquée au Developement Rural" pageId="6" pageNumber="190" type="Herbarium">TEF1</specimenCode>
|
||
-α
|
||
</emphasis>
|
||
;
|
||
<accessionNumber id="944DAB42FFB7CF08FCA662FA4BBAFED0" box="[869,998,230,257]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786495" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FCA662FA4BCCFED0" box="[869,912,230,257]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
786495
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB7CF08FC3662FA4C1AFED1" box="[1013,1094,230,256]" italics="true" pageId="6" pageNumber="190">Alt a 1</emphasis>
|
||
). and
|
||
</materialsCitation>
|
||
<materialsCitation id="3B763CFCFFB7CF08FB5762FA4D26FEF4" accessionNumber="MT782299, MT786493, MT786499, MT786502, MT786496" collectionCode="C, MT, GAPDH" country="Iran" location="IRAN" pageId="6" pageNumber="190" specimenCode="RPB2, TEF1" specimenCount="1">
|
||
<collectingCountry id="F3097631FFB7CF08FB5762FA4C84FED1" box="[1172,1240,230,256]" name="Iran" pageId="6" pageNumber="190">IRAN</collectingCountry>
|
||
4222
|
||
<collectionCode id="ED0FAE64FFB7CF08FADF62FA4D72FED1" box="[1308,1326,230,256]" country="Denmark" name="University of Copenhagen" pageId="6" pageNumber="190" type="Herbarium">C</collectionCode>
|
||
(GenBank accessions:
|
||
<accessionNumber id="944DAB42FFB7CF08FECE631649D2FEF5" box="[269,398,266,292]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT782299" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FECE63164964FEF5" box="[269,312,266,292]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
782299
|
||
</accessionNumber>
|
||
, ITS;
|
||
<accessionNumber id="944DAB42FFB7CF08FE1163164A0FFEF5" box="[466,595,266,292]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786493" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FE11631649A1FEF5" box="[466,509,266,292]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
786493
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB7CF08FD9D63174AE1FEF4" box="[606,701,267,293]" italics="true" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FD9D63174AE1FEF4" box="[606,701,267,293]" pageId="6" pageNumber="190">GAPDH</collectionCode>
|
||
</emphasis>
|
||
;
|
||
<accessionNumber id="944DAB42FFB7CF08FD0863164B10FEF5" box="[715,844,266,292]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786499" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FD0863164AAAFEF5" box="[715,758,266,292]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
786499
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB7CF08FC9463164BC5FEF5" box="[855,921,266,292]" italics="true" pageId="6" pageNumber="190">
|
||
<specimenCode id="DBB89EDAFFB7CF08FC9463164BC5FEF5" box="[855,921,266,292]" collectionCode="RPB" pageId="6" pageNumber="190">RPB2</specimenCode>
|
||
</emphasis>
|
||
;
|
||
<accessionNumber id="944DAB42FFB7CF08FC6B63164C74FEF4" box="[936,1064,266,293]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786502" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FC6B63164B8FFEF4" box="[936,979,266,293]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
786502
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB7CF08FBF763164CD7FEF5" box="[1076,1163,266,292]" italics="true" pageId="6" pageNumber="190">
|
||
<specimenCode id="DBB89EDAFFB7CF08FBF763164C28FEF5" box="[1076,1140,266,292]" collectionCode="TEF" country="Madagascar" httpUri="http://biocol.org/urn:lsid:biocol.org:col:12774" lsid="urn:lsid:biocol.org:col:12774" name="Centre National de la Recherche Appliquée au Developement Rural" pageId="6" pageNumber="190" type="Herbarium">TEF1</specimenCode>
|
||
-α
|
||
</emphasis>
|
||
;
|
||
<accessionNumber id="944DAB42FFB7CF08FB5963164D47FEF5" box="[1178,1307,266,292]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/MT786496" pageId="6" pageNumber="190">
|
||
<collectionCode id="ED0FAE64FFB7CF08FB5963164C99FEF5" box="[1178,1221,266,292]" country="Russia" name="Mus. Tinro, Vladyvostok" pageId="6" pageNumber="190">MT</collectionCode>
|
||
786496
|
||
</accessionNumber>
|
||
,
|
||
<emphasis id="B96AEAB3FFB7CF08FAE563164D2DFEF5" box="[1318,1393,266,292]" italics="true" pageId="6" pageNumber="190">Alt a 1</emphasis>
|
||
)
|
||
</materialsCitation>
|
||
.
|
||
</paragraph>
|
||
<paragraph id="8BA136A1FFB7CF08FF7E63334A51FD5D" blockId="6.[136,1452,158,653]" pageId="6" pageNumber="190">
|
||
<emphasis id="B96AEAB3FFB7CF08FF7E633348A2FE98" bold="true" box="[189,254,303,329]" italics="true" pageId="6" pageNumber="190">Notes</emphasis>
|
||
:
|
||
<taxonomicName id="4C1E4D22FFB7CF08FECC633249ABFE99" box="[271,503,302,328]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="guilanica">
|
||
<emphasis id="B96AEAB3FFB7CF08FECC633249ABFE99" box="[271,503,302,328]" italics="true" pageId="6" pageNumber="190">Alternaria guilanica</emphasis>
|
||
</taxonomicName>
|
||
is phylogenetically related to
|
||
<emphasis id="B96AEAB3FFB7CF08FC9263334D27FE99" box="[849,1403,302,329]" italics="true" pageId="6" pageNumber="190">
|
||
<taxonomicName id="4C1E4D22FFB7CF08FC9263334BE5FE99" box="[849,953,302,329]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="solani">A. solani</taxonomicName>
|
||
,
|
||
<taxonomicName id="4C1E4D22FFB7CF08FC0563334C63FE99" box="[966,1087,302,329]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="grandis">A. grandis</taxonomicName>
|
||
,
|
||
<taxonomicName id="4C1E4D22FFB7CF08FB8863334C91FE99" box="[1099,1229,303,329]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="protenta">A. protenta</taxonomicName>
|
||
,
|
||
<taxonomicName id="4C1E4D22FFB7CF08FB1963334D27FE99" box="[1242,1403,302,329]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="dichondrae">A. dichondrae</taxonomicName>
|
||
</emphasis>
|
||
and
|
||
<taxonomicName id="4C1E4D22FFB7CF08FF4B634F4969FEBD" box="[136,309,338,365]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="paralinicola">
|
||
<emphasis id="B96AEAB3FFB7CF08FF4B634F4969FEBD" box="[136,309,338,365]" italics="true" pageId="6" pageNumber="190">A. paralinicola</emphasis>
|
||
</taxonomicName>
|
||
(formerly known as
|
||
<taxonomicName id="4C1E4D22FFB7CF08FDEC634F4AF4FEBD" box="[559,680,338,365]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="linicola">
|
||
<emphasis id="B96AEAB3FFB7CF08FDEC634F4AF4FEBD" box="[559,680,338,365]" italics="true" pageId="6" pageNumber="190">A. linicola</emphasis>
|
||
</taxonomicName>
|
||
) (
|
||
<figureCitation id="13252A24FFB7CF08FD07634E4B55FEBD" box="[708,777,338,364]" captionStart="FIGURE 1" captionStartId="4.[136,229,1928,1950]" captionTargetBox="[184,1418,265,1885]" captionTargetId="figure-50@4.[151,1436,245,1903]" captionTargetPageId="4" captionText="FIGURE 1. Phylogenetic tree generated from Bayesian Inference (BI) based on the combined dataset of ITS-rDNA, GAPDH, RPB2, TEF1-α and Alt a 1 for 44 Alternaria strains. The Bayesian posterior probabilities (>0.75) and RAxML Maximum likelihood and Maximum parsimony bootstrap values (>50%) are given at the nodes (PP/ML/MP). The tree was rooted to A. gypsophilae CBS 107.41 and A. vaccariae CBS 116533 (Alternaria sect. Gypsophilae) and the newly identified strains are in bold." figureDoi="http://doi.org/10.5281/zenodo.5508903" httpUri="https://zenodo.org/record/5508903/files/figure.png" pageId="6" pageNumber="190">Fig. 1</figureCitation>
|
||
). However,
|
||
<taxonomicName id="4C1E4D22FFB7CF08FC5F634F4C75FEBD" box="[924,1065,338,365]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="guilanica">
|
||
<emphasis id="B96AEAB3FFB7CF08FC5F634F4C75FEBD" box="[924,1065,338,365]" italics="true" pageId="6" pageNumber="190">A. guilanica</emphasis>
|
||
</taxonomicName>
|
||
is differentiated morphologically from these species mainly by its mature conidia morphology including their size range, beak length/branching and the number of transverse septa (50–135 × 10–20 μm, beaks up to 225 μm with 0–1 branches and 7–9 transverse septa) compared to
|
||
<taxonomicName id="4C1E4D22FFB7CF08FEE263A349DBFE09" box="[289,391,446,473]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="solani">
|
||
<emphasis id="B96AEAB3FFB7CF08FEE263A349DBFE09" box="[289,391,446,473]" italics="true" pageId="6" pageNumber="190">A. solani</emphasis>
|
||
</taxonomicName>
|
||
(conidia 80–115 × 16–26 μm, beaks up to 118 μm with 1–3 branches and 7–11 transverse septa),
|
||
<taxonomicName id="4C1E4D22FFB7CF08FF1963FF490CFE2D" box="[218,336,482,509]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="grandis">
|
||
<emphasis id="B96AEAB3FFB7CF08FF1963FF490CFE2D" box="[218,336,482,509]" italics="true" pageId="6" pageNumber="190">A. grandis</emphasis>
|
||
</taxonomicName>
|
||
(conidia 128–198 × 24–38 μm, beaks up to 200 μm commonly with 1–2 (–3) branches and 11–19 transverse septa),
|
||
<taxonomicName id="4C1E4D22FFB7CF08FE96601B4989FDF1" box="[341,469,519,545]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="protenta">
|
||
<emphasis id="B96AEAB3FFB7CF08FE96601B4989FDF1" box="[341,469,519,545]" italics="true" pageId="6" pageNumber="190">A. protenta</emphasis>
|
||
</taxonomicName>
|
||
(conidia 80–115 × 14–24 μm, beaks up to 135 μm commonly with 1–2 branches and 8–13 transverse septa),
|
||
<taxonomicName id="4C1E4D22FFB7CF08FE5260374A67FD95" box="[401,571,554,581]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="paralinicola">
|
||
<emphasis id="B96AEAB3FFB7CF08FE5260374A67FD95" box="[401,571,554,581]" italics="true" pageId="6" pageNumber="190">A. paralinicola</emphasis>
|
||
</taxonomicName>
|
||
(conidia 50–85 × 14–20 μm, beaks up to 160 μm with 1–3 branches and 5–12 transverse septa) and
|
||
<taxonomicName id="4C1E4D22FFB7CF08FE4360534A7DFDB9" box="[384,545,590,617]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="dichondrae">
|
||
<emphasis id="B96AEAB3FFB7CF08FE4360534A7DFDB9" box="[384,545,590,617]" italics="true" pageId="6" pageNumber="190">A. dichondrae</emphasis>
|
||
</taxonomicName>
|
||
(conidia 60–85 × 19–27 μm, beaks up to 110 μm with 1–4 branches and 7–10 transverse septa) (
|
||
<bibRefCitation id="EF8F4B50FFB7CF08FE91606E4A5EFD5D" author="Simmons, E. G." box="[338,514,626,652]" pageId="6" pageNumber="190" refId="ref7838" refString="Simmons, E. G. (2007) Alternaria: An identification manual, vol. 6. CBS Biodiversity, Utrecht, The Netherlands, 757 pp." type="book" year="2007">Simmons 2007</bibRefCitation>
|
||
).
|
||
</paragraph>
|
||
<paragraph id="8BA136A1FFB7CF08FF4B60A6490EFD05" blockId="6.[136,338,698,724]" box="[136,338,698,724]" pageId="6" pageNumber="190">
|
||
<emphasis id="B96AEAB3FFB7CF08FF4B60A6490EFD05" box="[136,338,698,724]" italics="true" pageId="6" pageNumber="190">Pathogenicity test</emphasis>
|
||
</paragraph>
|
||
<paragraph id="8BA136A1FFB7CF08FF4B611E4B09FC58" blockId="6.[136,1451,770,905]" pageId="6" pageNumber="190">
|
||
The artificial inoculation of the eggplant leaves using mycelial plugs of three tested
|
||
<taxonomicName id="4C1E4D22FFB7CF08FB98611F4CBBFCCD" box="[1115,1255,770,797]" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" kingdom="Fungi" order="Pleosporales" pageId="6" pageNumber="190" phylum="Ascomycota" rank="species" species="guilanica">
|
||
<emphasis id="B96AEAB3FFB7CF08FB98611F4CBBFCCD" box="[1115,1255,770,797]" italics="true" pageId="6" pageNumber="190">A. guilanica</emphasis>
|
||
</taxonomicName>
|
||
strains produced conspicuous necrotic lesions surrounded by chlorotic halos on the surface of leaves almost similar to the symptoms observed in the field (
|
||
<figureCitation id="13252A24FFB7CF08FE4B615649A6FCB5" box="[392,506,842,868]" captionStart="FIGURE 3" captionStartId="6.[136,229,1496,1518]" captionTargetBox="[172,1423,946,1461]" captionTargetId="figure-319@6.[151,1436,929,1471]" captionTargetPageId="6" captionText="FIGURE 3. a–g. Symptoms formed on eggplant leaves 7–10 days after inoculation in greenhouse conditions (a, b: strain IRAN 4220C; c–e: strain IRAN 4222C; f, g: strain IRAN 4221C) h. Control treatment." figureDoi="http://doi.org/10.5281/zenodo.5508907" httpUri="https://zenodo.org/record/5508907/files/figure.png" pageId="6" pageNumber="190">Fig. 3a–g</figureCitation>
|
||
). Re-isolation and re-identification of the inoculated strains confirmed the Koch’s postulates. No symptoms were formed on the controls (
|
||
<figureCitation id="13252A24FFB7CF08FD3761724B14FC58" box="[756,840,878,905]" captionStart="FIGURE 3" captionStartId="6.[136,229,1496,1518]" captionTargetBox="[172,1423,946,1461]" captionTargetId="figure-319@6.[151,1436,929,1471]" captionTargetPageId="6" captionText="FIGURE 3. a–g. Symptoms formed on eggplant leaves 7–10 days after inoculation in greenhouse conditions (a, b: strain IRAN 4220C; c–e: strain IRAN 4222C; f, g: strain IRAN 4221C) h. Control treatment." figureDoi="http://doi.org/10.5281/zenodo.5508907" httpUri="https://zenodo.org/record/5508907/files/figure.png" pageId="6" pageNumber="190">Fig. 3h</figureCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |