140 lines
11 KiB
XML
140 lines
11 KiB
XML
<document id="F93FC85DF6A94EFB67AC58CCDF2E93B2" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="EC7E1DA2F92256B7BB638064778B6AB6" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Lokrumaceae Tedersoo 2024, fam. nov." docType="treatment" docVersion="1" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723223268898" updateUser="pensoft">
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<mods:mods id="FF19F78062C16A3977EE2657ABE9DBAC" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="C41B846F449BDA1283BC583DC1DF3D58">
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<mods:title id="061BD7F8C514FC644113CE6806738F2A">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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</mods:titleInfo>
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<mods:name id="D7B87547A9838FFF93383481A681FDF5" type="personal">
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<mods:role id="779ECE647F39329996A8094098AAD85D">
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<mods:roleTerm id="B6794E92795E3F90EDDAF36655210350">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="2D3FE534ED385972D022861E07BCDD7D">Tedersoo, Leho</mods:namePart>
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<mods:affiliation id="5EA05C03F469825D89185AAC9052561E">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="9FBF8BA67FAA49A8AC5A719F5CBB8182" type="personal">
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<mods:role id="4D8911FA10063F6B3E7F21FE86F1042C">
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<mods:roleTerm id="654885AA5FB790CD79997917A91E437D">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="104142DB7F0D6A3CA0A2D1EF88A6692B">Magurno, Franco</mods:namePart>
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<mods:nameIdentifier id="138DD5034D0B7EEC8AAA97741073ED16" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
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<mods:affiliation id="5E6AB23EBEA1DF412BA098F8120F8723">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
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</mods:name>
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<mods:name id="22BA74B21AB81A0A66101498EC4F2138" type="personal">
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<mods:role id="FC76FED52C687EA9DE399F7E85A99F8A">
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<mods:roleTerm id="AE39FFA37011388E5C426045FF6A1BCE">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="E2391C1B6B3FE6A3887DA3D626677DFC">Alkahtani, Saad</mods:namePart>
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<mods:nameIdentifier id="30499B99B276438F7203B184ECEE33B9" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
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<mods:affiliation id="62C5D4C99B656DF35D09E75228FC259C">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="956EC1693D1761FDCBCA93926905EFDA" type="personal">
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<mods:roleTerm id="44AFBB6E4BA60DBB0746C952D78BC048">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="6979CB704490BB111DC00D59CDFA7D39">Mikryukov, Vladimir</mods:namePart>
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<mods:nameIdentifier id="F9AAF3483D04538F2FE530434E02ACA9" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
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<mods:affiliation id="5BA617C41EA97262DF43391BD01B5A5A">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="8D8367DA12DF3F053B868BFA2DB188AC">text</mods:typeOfResource>
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<mods:relatedItem id="69BB6E76B4B87404BA4857A78507F82D" type="host">
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<mods:titleInfo id="0B99E491533E33253C28631ECAFE7FA9">
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<mods:title id="61DE3BECAB02B498792E267BB64EFA5D">MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part id="AF1CD2EDB10B311EB3BE56EBD6F3086A">
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<mods:date id="50AE828C649FC1387E8291AD7BD49BC2">2024</mods:date>
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<mods:detail id="A66EBF49208A4DC9B7129E378001920B" type="pubDate">
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<mods:number id="5E6ED68A8FC918D29450D41138006A3F">2024-08-09</mods:number>
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</mods:detail>
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<mods:detail id="B961E9F23CC9D716CCB58CFB7EF27B0D" type="volume">
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<mods:number id="958A2A7BADA4CDE56600306552AFED3A">107</mods:number>
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</mods:detail>
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<mods:extent id="2F3F7D7622FEEA57B50D5161850B2382" unit="page">
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<mods:start id="8F6D25AB5A7A51A371C88C81C7D527C2">249</mods:start>
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<mods:end id="91AB434228DE7C7888734F57C06A2B64">271</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification id="44B0FD375B6989737EBB7789DECB2755">journal article</mods:classification>
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<mods:identifier id="295AEF7812E61515D862C3A36B962E0A" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
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</mods:mods>
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<treatment id="EC7E1DA2F92256B7BB638064778B6AB6" ID-arpha="EC7E1DA2-F922-56B7-BB63-8064778B6AB6" ID-mycobank="853595" LSID="urn:lsid:plazi:treatment:EC7E1DA2F92256B7BB638064778B6AB6" httpUri="http://treatment.plazi.org/id/EC7E1DA2F92256B7BB638064778B6AB6">
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<subSubSection id="EA75CF5369D730F4B551F5651D29D232" type="nomenclature">
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<paragraph id="FA1EFE9DB9CF9C8B3BDE0B1A1E8B5A65">
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<taxonomicName id="4C649EE616588C705CDBBE4B07403634" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" family="Lokrumaceae" kingdom="Fungi" order="Lokrumales" rank="family" status="fam. nov.">Lokrumaceae Tedersoo</taxonomicName>
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<taxonomicNameLabel id="1904EC3F5344BD51FD5E905DB9396F8F" rank="family">fam. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0E4ODI" type="type genus">
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<paragraph id="76C7B12C23C90BF59CA5E15B2116C45A">
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<heading id="9129EF875EACA689DD5AFAE39EC907F5" reason="title">
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<typeStatus id="865519ECB413D2317919FBE3F2610EFA">Type</typeStatus>
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genus.
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</heading>
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</paragraph>
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<paragraph id="3CEAFFDC6327C7E2CA17659D3AF15072">
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<taxonomicName id="22A53E9618A29C2CE810688996357679" authority="Tedersoo." authorityName="Tedersoo." class="Magnoliopsida" family="Dipterocarpaceae" genus="Lokruma" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
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<emphasis id="003A4D1F7EA9AA44941B69FA62914250" italics="true">Lokruma</emphasis>
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Tedersoo.
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</taxonomicName>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EKPDI" type="description">
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<paragraph id="8724484F7798C7F1743E0E07919D1C66">
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<heading id="1E07C271FA4BAC9DD0282D1C102EFAA2" reason="title">Description.</heading>
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</paragraph>
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<paragraph id="1A996AD00B006F0BD230484706C5130A">
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Covers the monophyletic group in
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<tp_taxon-name id="A5355BD2C12A2985717915B6979997F8">
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<tp_taxon-name-part id="3D4DDCFA1E584A552D56742D3570EC5A" taxon-name-part-type="order">Lokrumales</tp_taxon-name-part>
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</tp_taxon-name>
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(Fig.
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<figureCitation id="52DA8FA0170DE6B1508AEC2FDDC83B25" captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogenetic position of genera and genus-level groups of Endogonomycetes based on Maximum Likelihood analysis of SSU- 5.8 S-LSU sequences. The clades are collapsed, with the number of sequences included in parentheses. Question marks above branches indicate low ultra-rapid bootstrap support (< 95). Orders are highlighted in different colours. The uncollapsed phylogram is given in Suppl. material 3." figureDoi="10.3897/mycokeys.107.125549.figure2" httpUri="https://binary.pensoft.net/fig/1111389">2</figureCitation>
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). Phylogenetically delimited as the least inclusive clade covering sequence accessions EUK 1203766, EUK 1600125 and EUK 1600078 (Suppl. material
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<xref id="959FAD9760A4110073BCC2A420D64246" ref-type="supplementary-material" rid="S3">3</xref>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0E4PDI" type="notes">
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<paragraph id="88026BC74321902DB8173D8EB9EF624A">
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<heading id="B70A6F3D856AC051A08C8B1AB9975100" reason="title">Notes.</heading>
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</paragraph>
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<paragraph id="26585A9B59DCA88C153CA3EB4D943481">
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Recognised based on
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<abbrev id="ABBRID0EDQDI" xlink_title="environmental DNA">eDNA</abbrev>
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sequences only. Currently includes
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<taxonomicName id="0160A31EF1C471640CB4EC400D4B27C9" class="Magnoliopsida" family="Dipterocarpaceae" genus="Lokruma" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
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<emphasis id="C3C83C587461DE0C75E1F4F00B82F80C" italics="true">Lokruma</emphasis>
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</taxonomicName>
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and a few sequences not assigned to any genus; these include EUK 0014543 and EUK 0006923 (both
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<abbrev id="ABBRID0EOQDI" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="B8538EF6540CB7B21981F22690208FEA" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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5106, subtropical forest soil in Brejo da Lapa,
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<collectingCountry id="B4FC3DAA66A4796BBE5FB712D7CD13FC" name="Brazil">Brazil</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EVQDI" specific-use="{"type":"Point","coordinates":[44.738300,22.358200]}">
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-
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<geoCoordinate id="D4DBE8B9C67B8685785F207165E56ACB" degrees="22.3582" direction="north" orientation="latitude" precision="5" value="22.3582">22.3582 ° N</geoCoordinate>
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, -
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<geoCoordinate id="BF5D0D565AA2BA5D5BF06A0F78039D3E" degrees="44.7383" direction="east" orientation="longitude" precision="5" value="44.7383">44.7383 ° E</geoCoordinate>
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</named-content>
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) and EUK 1602939 (
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<abbrev id="ABBRID0E1QDI" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="21ACA65BD972B3A7FBAD1E6E68E297E0" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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4464,
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<taxonomicName id="49F814CE7C04E44555901D7E22AF90EC" class="Magnoliopsida" family="Fagaceae" genus="Quercus" kingdom="Plantae" order="Fagales" phylum="Tracheophyta" rank="species" species="robur">
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<emphasis id="058A2C48742B965E50A8B45FA388700B" italics="true">Quercus robur</emphasis>
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</taxonomicName>
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forest soil in Ruu,
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<collectingCountry id="F5F4FBEAE8016BA33ABF75B1E7BF61A5" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0ESRDI" specific-use="{"type":"Point","coordinates":[25.221660,59.450590]}">
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<geoCoordinate id="41539BDEEE18E80758157F9E4CCB622D" degrees="59.45059" direction="north" orientation="latitude" precision="1" value="59.45059">59.45059 ° N</geoCoordinate>
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,
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<geoCoordinate id="46F8B5DBCCBB7852677C315A1AC39205" degrees="25.22166" direction="east" orientation="longitude" precision="1" value="25.22166">25.22166 ° E</geoCoordinate>
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</named-content>
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).
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |