160 lines
14 KiB
XML
160 lines
14 KiB
XML
<document id="94F6CA16FC2393D3FEF0D4F5E30E77B5" ID-CLB-Dataset="300094" ID-DOI="10.12651/JSR.2021.10.2.117" ID-GBIF-Dataset="c0ffd0bd-9478-41d5-ba4e-8107e38e6a59" ID-ISSN="2713-8615" ID-Zenodo-Dep="12753253" IM.bibliography_approvedBy="carolina" IM.illustrations_approvedBy="carolina" IM.materialsCitations_approvedBy="carolina" IM.metadata_approvedBy="carolina" IM.tables_approvedBy="carolina" IM.taxonomicNames_approvedBy="carolina" IM.treatments_approvedBy="carolina" checkinTime="1721182659963" checkinUser="felipe" docAuthor="Kang, Heeyoung, Kim, Haneul, Yi, Hana, Kim, Wonyong, Yoon, Jung-Hoon, Im, Wan-Taek, Kim, Myung Kyum, Seong, Chi Nam, Kim, Seung Bum, Cha, Chang-Jun & Joh, Che Ok Jeon and Kiseong" docDate="2021" docId="276A87D9FFEEFFB9BD4DF94202D6AEDA" docLanguage="en" docName="JSpeciesRes.10.2.117-133.pdf" docOrigin="Journal of Species Research 10 (2)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Bacteroides fragilis Castellani & Chalmers 1919" docType="treatment" docVersion="4" lastPageNumber="120" masterDocId="DB53FFA1FFEDFFBCBE64FF970107A96D" masterDocTitle="A report of 43 unrecorded bacterial species within the phyla Bacteroidetes and Firmicutes isolated from various sources from Korea in 2019" masterLastPageNumber="133" masterPageNumber="117" pageNumber="120" updateTime="1721749527620" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:title id="6480436E13FC46CCC726BAE06CE2F73F">A report of 43 unrecorded bacterial species within the phyla Bacteroidetes and Firmicutes isolated from various sources from Korea in 2019</mods:title>
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<mods:namePart id="044FF10F8A1A6BC2ED70166C2939809F">Kang, Heeyoung</mods:namePart>
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<mods:affiliation id="D8CF9759101BAAAC41A4912A08DDC85F">Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Yongin 17035, Republic of Korea</mods:affiliation>
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<mods:namePart id="32F3E013B974036864B1387CF5A79174">Kim, Haneul</mods:namePart>
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<mods:affiliation id="EC304E0FA758C3B63442D143190D7B8F">Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Yongin 17035, Republic of Korea</mods:affiliation>
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<mods:namePart id="D6DF1F02F53C9269866F62D18ED6C35C">Yi, Hana</mods:namePart>
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<mods:affiliation id="8DE838D6CCDBE7682CDA4E3216BF1E23">School of Biosystem and Biomedical Science, Korea University, Seoul 02841, Republic of Korea</mods:affiliation>
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<mods:namePart id="618A3B394B6DB0B542A128DADB702981">Kim, Wonyong</mods:namePart>
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<mods:affiliation id="61A2469533C47A1E0719C6C79971FA99">Department of Microbiology, Chung-Ang University College of Medicine, Seoul 06973, Republic of Korea</mods:affiliation>
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<mods:namePart id="A221F62EE357CD99026FD785433191AB">Yoon, Jung-Hoon</mods:namePart>
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<mods:affiliation id="6D129F61F28A591E8C92B58137C99362">Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon 16419, Republic of Korea</mods:affiliation>
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<mods:namePart id="234C25163590DAFDB0512D5978E25471">Im, Wan-Taek</mods:namePart>
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<mods:affiliation id="E4D3231C75B058029647BEB6BE4C8EE0">Department of Biotechnology, Hankyong National University, Anseong 17579, Republic of Korea</mods:affiliation>
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<mods:namePart id="D45AB0A23F9AE44C08473649A5162B68">Kim, Myung Kyum</mods:namePart>
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<mods:affiliation id="3BD90106726492727611A76E949B2B25">Department of Bio & Environmental Technology, Seoul Women’s University, Seoul 01797, Republic of Korea</mods:affiliation>
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<mods:namePart id="3220A7B35CDC56FD179242CB5338F8E7">Seong, Chi Nam</mods:namePart>
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<mods:affiliation id="22060E6E54E95D7A4B9273D1692F3E62">Department of Biology, Sunchon National University, Suncheon 57922, Republic of Korea</mods:affiliation>
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<mods:namePart id="4D2C683AD9DAECF050ABC604621CFB2B">Kim, Seung Bum</mods:namePart>
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<mods:affiliation id="2FB45AF23A00D5E8CDB4681CC2E6DF03">Department of Microbiology, Chungnam National University, Daejeon 34134, Republic of Korea</mods:affiliation>
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<mods:namePart id="BC0FD9AA89BE7B291D62230D60351B0B">Cha, Chang-Jun</mods:namePart>
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<mods:affiliation id="954940E9DD9A636EFED52B7FE6CE8CEF">Department of Systems Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea & Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea & Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Yongin 17035, Republic of Korea</mods:affiliation>
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<mods:namePart id="C1DE94A3A1A5618F6659159A2AFCE484">Joh, Che Ok Jeon and Kiseong</mods:namePart>
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<mods:title id="29DD60CBF32C9BC2E289943B992086B0">Journal of Species Research</mods:title>
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<mods:part id="B22B9BC6E046FAB81C526E93604D3DC2">
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<mods:date id="C77047BF11EA115EED9B19A496A0A9BA">2021</mods:date>
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<mods:number id="4335669DB7D31C5C96CE1F0774C40436">2021-05-31</mods:number>
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<mods:number id="E520F9D193DD34F86CFB51642FB81F7C">10</mods:number>
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<treatment id="276A87D9FFEEFFB9BD4DF94202D6AEDA" ID-DOI="http://doi.org/10.5281/zenodo.12801637" ID-Zenodo-Dep="12801637" LSID="urn:lsid:plazi:treatment:276A87D9FFEEFFB9BD4DF94202D6AEDA" httpUri="http://treatment.plazi.org/id/276A87D9FFEEFFB9BD4DF94202D6AEDA" lastPageId="5" lastPageNumber="120" pageId="3" pageNumber="120">
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<subSubSection id="E7D96544FFEEFFBFBD4DF9420411AF80" box="[809,1302,1749,1773]" pageId="3" pageNumber="120" type="nomenclature">
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<paragraph id="AF7C36CFFFEEFFBFBD4DF9420411AF80" blockId="3.[809,1302,1749,1773]" box="[809,1302,1749,1773]" pageId="3" pageNumber="120">
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<heading id="F43481A3FFEEFFBFBD4DF9420411AF80" box="[809,1302,1749,1773]" fontSize="10" level="2" pageId="3" pageNumber="120" reason="5">
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<emphasis id="9DB7EADDFFEEFFBFBD4DF9420411AF80" bold="true" box="[809,1302,1749,1773]" pageId="3" pageNumber="120">
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Description of
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<taxonomicName id="68C34D4CFFEEFFBFBDB4F94205A0AF80" authority="(Veillon & Zuber, 1898) Castellani & Chalmers, 1919" authorityName=" Castellani & Chalmers" authorityYear="1919" box="[976,1191,1749,1773]" class="Clostridia" family="Bacteroidaceae" genus="Bacteroides" kingdom="Bacteria" order="Clostridiales" pageId="3" pageNumber="120" phylum="Firmicutes" rank="species" species="fragilis">
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<emphasis id="9DB7EADDFFEEFFBFBDB4F94205A0AF80" bold="true" box="[976,1191,1749,1773]" italics="true" pageId="3" pageNumber="120">Bacteroides fragilis</emphasis>
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</taxonomicName>
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LPB0329
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</emphasis>
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</paragraph>
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<subSubSection id="E7D96544FFEEFFB9BD5BF89102D6AEDA" lastPageId="5" lastPageNumber="122" pageId="3" pageNumber="120" type="description">
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<paragraph id="AF7C36CFFFEEFFB9BD5BF89102D6AEDA" blockId="3.[809,1414,1798,1983]" lastBlockId="5.[809,1414,1854,1976]" lastPageId="5" lastPageNumber="122" pageId="3" pageNumber="120">
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Gram-stain-negative, anaerobic, non-flagellated, rod-shaped bacterium (0.6-0.9 μm wide, 1.9-2.0 μm long). Colonies grown on anaerobe basal agar are cream, circular, entire, and convex. Oxidase activity is negative. In the API 20A test, cells are positive for urease activity; and acidification of D- glucose, D- mannitol, D- lactose, sucrose, D- maltose, D- xylose, L- arabinose, D- mannose, D- melezitose,
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<subScript id="3347348AFFE8FFB9BEAEF8F201D9AE1A" attach="right" box="[202,222,1887,1911]" fontSize="7" pageId="5" pageNumber="122">D-</subScript>
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raffinose, and
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<subScript id="3347348AFFE8FFB9BF1BF8F20095AE1A" attach="right" box="[383,402,1887,1911]" fontSize="7" pageId="5" pageNumber="122">D-</subScript>
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sorbitol, but negative for indole production; hydrolysis of aesculin and gelatin; and acidification of salicin, glycerol, D- cellobiose, D- rhamnose, and D- trehalose.
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<taxonomicName id="68C34D4CFFE8FFB9BDD5F8A902F5AE3B" box="[945,1010,1854,1878]" family="Strain" pageId="5" pageNumber="124" rank="family">Strain</taxonomicName>
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<specimenCode id="FF659EB4FFE8FFB9BD9FF8A80565AE3A" box="[1019,1122,1855,1879]" collectionCode="LPB" country="Bolivia" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15532" lsid="urn:lsid:biocol.org:col:15532" name="Herbario Nacional de Bolivia, Universidad Mayor de San Andrés" pageId="5" pageNumber="122" type="Herbarium">LPB0329</specimenCode>
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(
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<emphasis id="9DB7EADDFFE8FFB9BA10F8A9058FAE3B" bold="true" box="[1140,1160,1854,1878]" pageId="5" pageNumber="122">=</emphasis>
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NIBRBAC000503364) was isolated from an animal intestine sample (mouse) collected from
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<collectingRegion id="6D07F82DFFE8FFB9BDCAF8E8050DAEFA" box="[942,1034,1919,1943]" country="South Korea" name="Daejon" pageId="5" pageNumber="122">Daejeon</collectingRegion>
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,
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<collectingCountry id="D7D4765FFFE8FFB9BA72F8E805D8AEFA" box="[1046,1247,1919,1943]" name="South Korea" pageId="5" pageNumber="122">Republic of Korea</collectingCountry>
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(
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36°23
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<emphasis id="9DB7EADDFFE8FFB9BB4AF8EA0433AEFA" bold="true" box="[1326,1332,1917,1943]" italics="true" pageId="5" pageNumber="122">ʹ</emphasis>
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56.5
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<emphasis id="9DB7EADDFFE8FFB9BB06F8EA046BAEFA" bold="true" box="[1378,1388,1917,1943]" italics="true" pageId="5" pageNumber="122">ʺ</emphasis>
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N
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</geoCoordinate>
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,
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<geoCoordinate id="CAF75008FFE8FFB9BD4DF80802C3AEDA" box="[809,964,1950,1976]" degrees="127" direction="east" minutes="23" orientation="longitude" pageId="5" pageNumber="122" precision="1" seconds="39.8" value="127.39439">
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127°23
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<emphasis id="9DB7EADDFFE8FFB9BD11F809027CAED5" bold="true" box="[885,891,1950,1976]" italics="true" pageId="5" pageNumber="122">ʹ</emphasis>
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39.8
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<emphasis id="9DB7EADDFFE8FFB9BDCCF80902B5AED5" bold="true" box="[936,946,1950,1976]" italics="true" pageId="5" pageNumber="122">ʺ</emphasis>
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E
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</geoCoordinate>
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).
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |