166 lines
14 KiB
XML
166 lines
14 KiB
XML
<document id="17906E19935B979FABD4D95995CA61F8" ID-CLB-Dataset="300094" ID-DOI="10.12651/JSR.2021.10.2.117" ID-GBIF-Dataset="c0ffd0bd-9478-41d5-ba4e-8107e38e6a59" ID-ISSN="2713-8615" ID-Zenodo-Dep="12753253" IM.bibliography_approvedBy="carolina" IM.illustrations_approvedBy="carolina" IM.materialsCitations_approvedBy="carolina" IM.metadata_approvedBy="carolina" IM.tables_approvedBy="carolina" IM.taxonomicNames_approvedBy="carolina" IM.treatments_approvedBy="carolina" checkinTime="1721182659963" checkinUser="felipe" docAuthor="Kang, Heeyoung, Kim, Haneul, Yi, Hana, Kim, Wonyong, Yoon, Jung-Hoon, Im, Wan-Taek, Kim, Myung Kyum, Seong, Chi Nam, Kim, Seung Bum, Cha, Chang-Jun & Joh, Che Ok Jeon and Kiseong" docDate="2021" docId="276A87D9FFE4FFB5BEF4FD90032EAD79" docLanguage="en" docName="JSpeciesRes.10.2.117-133.pdf" docOrigin="Journal of Species Research 10 (2)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Empedobacter brevis HMF" docType="treatment" docVersion="4" lastPageNumber="126" masterDocId="DB53FFA1FFEDFFBCBE64FF970107A96D" masterDocTitle="A report of 43 unrecorded bacterial species within the phyla Bacteroidetes and Firmicutes isolated from various sources from Korea in 2019" masterLastPageNumber="133" masterPageNumber="117" pageNumber="126" updateTime="1721749527620" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:title id="BBE77B8491F6B6A0048CE0AB9A5B1039">A report of 43 unrecorded bacterial species within the phyla Bacteroidetes and Firmicutes isolated from various sources from Korea in 2019</mods:title>
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<mods:name id="B4B57352768C9DB399CAF8C4F8DB4C03" type="personal">
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<mods:namePart id="9ADDDD8371FA150A5E681E1D4C325A78">Kang, Heeyoung</mods:namePart>
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<mods:affiliation id="86C2014A5F473F75FE139A26780CFCD8">Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Yongin 17035, Republic of Korea</mods:affiliation>
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<mods:namePart id="E2EB2C9F3A86516D1541F021E6D6581B">Kim, Haneul</mods:namePart>
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<mods:affiliation id="2F7D2D835648683377347D7B31277F6C">Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Yongin 17035, Republic of Korea</mods:affiliation>
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<mods:namePart id="87128CB1D086F1BD299155996695C6B1">Yi, Hana</mods:namePart>
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<mods:affiliation id="7FCD5013B11DF624CBDF5E999656329C">School of Biosystem and Biomedical Science, Korea University, Seoul 02841, Republic of Korea</mods:affiliation>
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<mods:namePart id="ABA0E5C2945A22787633CBF727D84BB5">Kim, Wonyong</mods:namePart>
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<mods:affiliation id="FA21EF00B4CD312D8275ABEEF9A23133">Department of Microbiology, Chung-Ang University College of Medicine, Seoul 06973, Republic of Korea</mods:affiliation>
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<mods:namePart id="E7E6EFBA0CFDD77E59B814A94261295F">Yoon, Jung-Hoon</mods:namePart>
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<mods:affiliation id="7DBFAEB7C6F372112C7F40DACB243364">Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon 16419, Republic of Korea</mods:affiliation>
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<mods:name id="6DA5CA8F06DCB15E5CA5C4630B7CE1C2" type="personal">
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<mods:namePart id="37778458A3FD76E373A456C784516A2A">Im, Wan-Taek</mods:namePart>
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<mods:affiliation id="0CCA7B42BE4F70209ECEF40DE9703C33">Department of Biotechnology, Hankyong National University, Anseong 17579, Republic of Korea</mods:affiliation>
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<mods:namePart id="3C65361883B73A6EB2B0394616B8C047">Kim, Myung Kyum</mods:namePart>
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<mods:affiliation id="B7246D0C648A4206632C1D29601D0C4A">Department of Bio & Environmental Technology, Seoul Women’s University, Seoul 01797, Republic of Korea</mods:affiliation>
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<mods:name id="1391C60F206379B77EA5DD5E70F00254" type="personal">
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<mods:namePart id="C69843B4672CA09497459DE2EF3A0347">Seong, Chi Nam</mods:namePart>
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<mods:affiliation id="4E8E0C27C2C607C1BB0FB927E63C75E9">Department of Biology, Sunchon National University, Suncheon 57922, Republic of Korea</mods:affiliation>
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<mods:namePart id="D57B48336E1467CBA2B1315D69853CA4">Kim, Seung Bum</mods:namePart>
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<mods:affiliation id="B197A5353DF35DEE0810A94A4DBB3BB8">Department of Microbiology, Chungnam National University, Daejeon 34134, Republic of Korea</mods:affiliation>
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<mods:namePart id="12A0379B1310D98A08B1F9DAE2A1E1F9">Cha, Chang-Jun</mods:namePart>
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<mods:affiliation id="2C1E5B62BAF90CEBF404C4B43BFD5AA4">Department of Systems Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea & Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea & Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Yongin 17035, Republic of Korea</mods:affiliation>
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<mods:namePart id="153250C735259C5FDE556852F74E3209">Joh, Che Ok Jeon and Kiseong</mods:namePart>
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<mods:title id="CF177F013C86128AEE473EBDAD8682A7">Journal of Species Research</mods:title>
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<mods:part id="9731ACF9C0D2DEE12E6A3680160AA7ED">
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<mods:date id="162799913C3E3725B669C162AAA0DC40">2021</mods:date>
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<mods:number id="437D0125CFA56E5F9336D7936D29212D">2021-05-31</mods:number>
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<mods:number id="26E6FE22E8716F6D90CF86B86C5E1E03">10</mods:number>
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<mods:start id="DE8A48289B610CA0838169D1624C8031">117</mods:start>
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<mods:identifier id="E38FA29F8A504A3B5CCDEEC1C61E64C0" type="DOI">10.12651/JSR.2021.10.2.117</mods:identifier>
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<mods:identifier id="6966C04E39C2DF27E949192160402586" type="ISSN">2713-8615</mods:identifier>
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<treatment id="276A87D9FFE4FFB5BEF4FD90032EAD79" ID-DOI="http://doi.org/10.5281/zenodo.12801655" ID-Zenodo-Dep="12801655" LSID="urn:lsid:plazi:treatment:276A87D9FFE4FFB5BEF4FD90032EAD79" httpUri="http://treatment.plazi.org/id/276A87D9FFE4FFB5BEF4FD90032EAD79" lastPageNumber="126" pageId="9" pageNumber="126">
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<subSubSection id="E7D96544FFE4FFB5BEF4FD900390AB72" box="[144,663,519,543]" pageId="9" pageNumber="126" type="nomenclature">
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<paragraph id="AF7C36CFFFE4FFB5BEF4FD900390AB72" blockId="9.[144,663,519,543]" box="[144,663,519,543]" pageId="9" pageNumber="126">
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<heading id="F43481A3FFE4FFB5BEF4FD900390AB72" box="[144,663,519,543]" fontSize="10" level="2" pageId="9" pageNumber="126" reason="5">
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<emphasis id="9DB7EADDFFE4FFB5BEF4FD900390AB72" bold="true" box="[144,663,519,543]" pageId="9" pageNumber="126">
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Description of
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<taxonomicName id="68C34D4CFFE4FFB5BF53FD900365AB72" ID-CoL="39HK5" authority="HMF" authorityName="HMF" box="[311,610,519,543]" class="Flavobacteriia" family="Flavobacteriaceae" genus="Empedobacter" kingdom="Bacteria" order="Flavobacteriales" pageId="9" pageNumber="126" phylum="Bacteroidetes" rank="species" species="brevis">
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<emphasis id="9DB7EADDFFE4FFB5BF53FD90031AAB72" bold="true" box="[311,541,519,543]" italics="true" pageId="9" pageNumber="126">Empedobacter brevis</emphasis>
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HMF
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</taxonomicName>
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6096
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</emphasis>
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</heading>
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</paragraph>
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<subSubSection id="E7D96544FFE4FFB5BEC2FDAF032EAD79" pageId="9" pageNumber="126" type="description">
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<paragraph id="AF7C36CFFFE4FFB5BEC2FDAF032EAD79" blockId="9.[144,749,568,1044]" pageId="9" pageNumber="126">
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Gram-stain-negative, facultative anaerobic, non-flagellated, rod-shaped bacterium (0.4-0.6 μm wide, 0.8-1.0 μm long). Colonies grown
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<specimenCode id="FF659EB4FFE4FFB5BFCAFDEE00CBABFC" box="[430,460,633,657]" collectionCode="R" country="Chile" name="Departamento de Geologia, Universidad de Chile" pageId="9" pageNumber="126">R2</specimenCode>
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A agar are pale yellow, cicular, convex, and smooth.
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<location id="AA1C6014FFE4FFB5BFD9FD0E0313ABDC" LSID="urn:lsid:plazi:treatment:276A87D9FFE4FFB5BEF4FD90032EAD79:AA1C6014FFE4FFB5BFD9FD0E0313ABDC" box="[445,532,665,689]" country="South Korea" latitude="33.497223" longLatPrecision="1" longitude="126.45169" municipality="In" name="Oxidase" pageId="9" pageNumber="126" stateProvince="Jeju">Oxidase</location>
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activity is positive.
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<collectingMunicipality id="4F18ACB5FFE4FFB5BEF4FD2D01A1ABBC" box="[144,166,698,721]" pageId="9" pageNumber="126">In</collectingMunicipality>
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the API 20NE test, cells are positive for indole production; hydrolysis of aesculine and gelatin; and assimilation of
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<emphasis id="9DB7EADDFFE4FFB5BE9FFD6D000AAA7C" box="[251,269,762,785]" italics="true" pageId="9" pageNumber="126">N</emphasis>
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-acetyl-glucosamine, but negative for nitrate reduction; glucose fermentation; activity of arginine dihydrolase, urease, and
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<emphasis id="9DB7EADDFFE4FFB5BFC6FCAD00B6AA3F" box="[418,433,826,850]" italics="true" pageId="9" pageNumber="126">β</emphasis>
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-galactosidase; and assimilation of D- glucose, L- arabinose, D- mannose, D- mannitol, D- maltose, potassium gluconate, capric acid, adipic acid, malic acid, trisodium citrate, and phenylacetic acid.
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<taxonomicName id="68C34D4CFFE4FFB5BEF4FC2C01D7AABE" box="[144,208,955,979]" family="Strain" pageId="9" pageNumber="124" rank="family">Strain</taxonomicName>
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HMF6096 (
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<emphasis id="9DB7EADDFFE4FFB5BF31FC2C006EAABE" bold="true" box="[341,361,955,979]" pageId="9" pageNumber="126">=</emphasis>
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NIBRBAC000503110) was isolated from a seawater sample collected from
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<collectingRegion id="6D07F82DFFE4FFB5BC52FC4B0363AA99" box="[566,612,988,1012]" country="South Korea" name="Jeju" pageId="9" pageNumber="126">Jeju</collectingRegion>
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,
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<collectingCountry id="D7D4765FFFE4FFB5BC0BFC4B01D6AD7E" name="South Korea" pageId="9" pageNumber="126">Republic of Korea</collectingCountry>
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(
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<geoCoordinate id="CAF75008FFE4FFB5BEB9FC6B0075AD7E" box="[221,370,1018,1044]" degrees="33" direction="north" minutes="29" orientation="latitude" pageId="9" pageNumber="126" precision="1" seconds="50.0" value="33.497223">
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33°29
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<emphasis id="9DB7EADDFFE4FFB5BF7AFC6D0023AD79" bold="true" box="[286,292,1018,1044]" italics="true" pageId="9" pageNumber="126">ʹ</emphasis>
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50.0
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<emphasis id="9DB7EADDFFE4FFB5BF36FC6D005BAD79" bold="true" box="[338,348,1018,1044]" italics="true" pageId="9" pageNumber="126">ʺ</emphasis>
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N
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</geoCoordinate>
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,
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<geoCoordinate id="CAF75008FFE4FFB5BF19FC6B031BAD79" box="[381,540,1018,1044]" degrees="126" direction="east" minutes="27" orientation="longitude" pageId="9" pageNumber="126" precision="1" seconds="06.1" value="126.45169">
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126°27
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<emphasis id="9DB7EADDFFE4FFB5BFAEFC6D00D7AD79" bold="true" box="[458,464,1018,1044]" italics="true" pageId="9" pageNumber="126">ʹ</emphasis>
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06.1
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<emphasis id="9DB7EADDFFE4FFB5BF9BFC6D030EAD79" bold="true" box="[511,521,1018,1044]" italics="true" pageId="9" pageNumber="126">ʺ</emphasis>
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E
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</geoCoordinate>
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).
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |