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<treatment id="0228D806FFADFF83FC9AFD49FC4A6161" ID-DOI="http://doi.org/10.5281/zenodo.12538877" ID-GBIF-Taxon="233769601" ID-Zenodo-Dep="12538877" LSID="urn:lsid:plazi:treatment:0228D806FFADFF83FC9AFD49FC4A6161" httpUri="http://treatment.plazi.org/id/0228D806FFADFF83FC9AFD49FC4A6161" lastPageId="15" lastPageNumber="76" pageId="13" pageNumber="74">
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<taxonomicName id="4D811293FFADFF81FC9AFD49FBF062A9" ID-CoL="3RPK" authorityName="Van Wichelen &amp; DHondt &amp; Claeys &amp; Vyverman &amp; Berney &amp; Bass &amp; Vanormelingen" authorityYear="2016" box="[846,1032,653,680]" class="Discosea" family="Cochliopodiidae" genus="Cochliopodium" kingdom="Protozoa" order="Himatismenida" pageId="13" pageNumber="74" phylum="Amoebozoa" rank="genus">
<emphasis id="B8F5B502FFADFF81FC9AFD49FBF062A9" bold="true" box="[846,1032,653,680]" italics="true" pageId="13" pageNumber="74">Cochliopodium</emphasis>
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The lens-shaped strain A1
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was placed in the monophyletic genus
<taxonomicName id="4D811293FFADFF81FBF4FD1EFB2D62F5" authorityName="Van Wichelen &amp; DHondt &amp; Claeys &amp; Vyverman &amp; Berney &amp; Bass &amp; Vanormelingen" authorityYear="2016" box="[1056,1237,730,756]" class="Discosea" family="Cochliopodiidae" genus="Cochliopodium" kingdom="Protozoa" order="Himatismenida" pageId="13" pageNumber="74" phylum="Amoebozoa" rank="genus">
<emphasis id="B8F5B502FFADFF81FBF4FD1EFB2D62F5" box="[1056,1237,730,756]" italics="true" pageId="13" pageNumber="74">Cochliopodium</emphasis>
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(
<figureCitation id="12BA7595FFADFF81FB32FD1EFABE62F4" box="[1254,1350,730,757]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="13" pageNumber="74">Fig. 7A</figureCitation>
), but the 18S rDNA sequence differed from other representatives of the genus by no less than 19.723.5% (143301 bp).
</paragraph>
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Locomotive amoebae of strain A1
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were round, oval or triangular (with the base directed anteriorly), had a length of 1540 µm (mean 26 µm), a width of 1554 µm (30) and a L/W ratio 0.71.2 (0.9) (
<figureCitation id="12BA7595FFADFF81FA91FC6DFA5963C5" box="[1349,1441,937,964]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="13" pageNumber="74">Fig. 7B</figureCitation>
). The central mass of granuloplasm was always entirely surrounded by a hyaline sheet that covered 1240% (23) of the body length and was often much narrower posteriorly (e.g.
<figureCitation id="12BA7595FFADFF81FC27FBF0FBAC644F" box="[1011,1108,1076,1102]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="13" pageNumber="74">Figs 7B</figureCitation>
<figureCitation id="12BA7595FFADFF81FB8BFBF0FB97644F" box="[1119,1135,1076,1102]" captionStart="Fig" captionStartId="9.[127,162,1135,1157]" captionTargetBox="[127,1452,221,1108]" captionTargetId="figure-7@9.[127,1452,221,1108]" captionTargetPageId="9" captionText="Fig. 3. TEM pictures of the scales on the cell surface of Korotnevella jeppesenii (a, c) and K. pelagolacustris (b, d) trophozoites viewed from top (a, b) and side (c, d). Scale bars: 500 nm." figureDoi="http://doi.org/10.5281/zenodo.12538720" httpUri="https://zenodo.org/record/12538720/files/figure.png" pageId="13" pageNumber="74">3</figureCitation>
,
<figureCitation id="12BA7595FFADFF81FB55FBF7FB6A644F" box="[1153,1170,1075,1102]" captionStart="Fig" captionStartId="12.[132,167,1863,1885]" captionTargetBox="[132,1457,1336,1835]" captionTargetId="figure-482@12.[132,1457,1336,1835]" captionTargetPageId="12" captionText="Fig. 5. LM pictures of Schoutedamoeba minuta showing trophozoites in non-oriented movement (af) and the limax-shaped locomotive form (gi). The presence of a pronounced hyaline cap, small adhesive uroidal filaments and tiny granules in the cytoplasm are indicated with white arrowheads, black arrows and a white arrow respectively. Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538725" httpUri="https://zenodo.org/record/12538725/files/figure.png" pageId="13" pageNumber="74">5</figureCitation>
). Locomotive amoebae contained 114 pointed subpseudopodia of maximally 10 µm long, that were never furcated and mostly situated at the lateral and anterior hyaloplasmic margin (
<figureCitation id="12BA7595FFADFF81FAAEFB5FFCB364D9" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="13" pageNumber="74">Figs 7B</figureCitation>
<figureCitation id="12BA7595FFADFF81FC86FB7AFC7964D9" box="[850,897,1214,1240]" captionStart-0="Fig" captionStart-1="Fig" captionStart-2="Fig" captionStart-3="Fig" captionStartId-0="6.[132,167,1694,1716]" captionStartId-1="7.[125,160,1721,1743]" captionStartId-2="9.[127,162,1135,1157]" captionStartId-3="9.[125,160,1695,1717]" captionTargetBox-2="[127,1452,221,1108]" captionTargetId-0="figure-8@5.[180,1401,222,1933]" captionTargetId-1="figure-9@8.[142,1454,223,1930]" captionTargetId-2="figure-7@9.[127,1452,221,1108]" captionTargetId-3="figure-10@10.[177,1411,223,1939]" captionTargetPageId-0="5" captionTargetPageId-1="8" captionTargetPageId-2="9" captionTargetPageId-3="10" captionText-0="Fig. 1.A 18S rDNA maximum likelihood phylogeny of Vannella, including Microcystisassociated strains (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of V. planctonica (strainsA2FBB: 2, 4, 5, 913 andA4P4ZHB:1, 3, 68) showing locomotive trophozoites (18), a grazing amoeba with a Microcystis cell inside a food vacuole (9), floating forms (1011) and a cyst stage (1213). C LM pictures of V. simplex (strain A17WVB) showing the floating form (14), locomotive amoebae (1518) with the presence of food vacuoles containing partly digested Microcystis cells (17), posteriorly adhered fecal pellets (1516), a long flagellum-like pseudopodium encircling a Microcystis cell (1718) and grazing amoebae on a colony of Microcystis aeruginosa with expanded (arrow) or contracted (arrowhead) flagellum-like pseudopodia visible in some of the trophozoites (19). The presence of a contracticle vacuole, a nucleus or a cyst opening is indicated by a black arrow, a black arrowhead or a white arrow respectively. Scale bars: 20 µm." captionText-1="Fig. 2. A 18S rDNA maximum likelihood phylogeny of Korotnevella, including Microcystis-associated strains (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of K. jeppesenii (strain A1JEPDK) showing trophozoites in non-oriented movement (15), during locomotion (6, 8) and during grazing on Microcystis aeruginosa cells (7) with the arrow indicating a lacuna-containing nucleolus. C LM pictures of K. pelagolacustris (strains A8WVB (7, 12), A16WVB (6, 8, 11), A21WVB (1, 13), A54WVB (35) and A1LMS (2, 9, 10)) showing trophozoites in different stages of non-oriented movement (14, 6), the locomotive form (812), grazing amoebae with Microcystis cells inside food vacuoles (5, 10), the cyst stage (7) and the floating form (13).Arrows indicate the nucleus with clearly visible nucleolus (in 8, 10, 12). Scale bars: 20 µm." captionText-2="Fig. 3. TEM pictures of the scales on the cell surface of Korotnevella jeppesenii (a, c) and K. pelagolacustris (b, d) trophozoites viewed from top (a, b) and side (c, d). Scale bars: 500 nm." captionText-3="Fig. 4. A 18S rDNA maximum likelihood phylogeny of the family Hartmannellidae, including Microcystis-associated strains of Copromyxa (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of C. microcystidis showing locomotive trophozoites (17, 10) containing a pronounced hyaline cap (white arrowheads), a vesicular nucleus with globular nucleolus (white arrows), big crystals (black arrows) and Microcystis cells inside food vacuoles (black arrowheads), non-oriented moving trophozoites (89, 11), a grazing amoeba capturing a Microcystis cell (1214), the floating form (15) and a double-walled cyst stage (16). C LM pictures of C. vandevyveri showing locomotive trophozoites (1, 69), trophozoites during non-oriented movement (25, 1012) and floating forms (1315). Black arrows indicate the presence of small, refractive crystals in the cytoplasm, the white arrow shows the vesicular nucleus with a globular lacuna-containing nucleolus, white arrowheads indicate a pronounced hyaline cap. Ingested Microcystis cells are visible in (9) and (11). Scale bars: 20 µm." figureDoi-0="http://doi.org/10.5281/zenodo.12538716" figureDoi-1="http://doi.org/10.5281/zenodo.12538718" figureDoi-2="http://doi.org/10.5281/zenodo.12538720" figureDoi-3="http://doi.org/10.5281/zenodo.12538723" httpUri-0="https://zenodo.org/record/12538716/files/figure.png" httpUri-1="https://zenodo.org/record/12538718/files/figure.png" httpUri-2="https://zenodo.org/record/12538720/files/figure.png" httpUri-3="https://zenodo.org/record/12538723/files/figure.png" pageId="13" pageNumber="74">14</figureCitation>
). Uroidal structures were rarely visible posteriorly, either consisting of one to a few trailing adhesive filaments of maximally 10 µm long (
<figureCitation id="12BA7595FFADFF81FB3CFAC7FAB1651C" box="[1256,1353,1283,1309]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="13" pageNumber="74">Figs 7B</figureCitation>
<figureCitation id="12BA7595FFADFF81FA87FAC7FA9C651C" box="[1363,1380,1283,1309]" captionStart="Fig" captionStartId="9.[125,160,1695,1717]" captionTargetId="figure-10@10.[177,1411,223,1939]" captionTargetPageId="10" captionText="Fig. 4. A 18S rDNA maximum likelihood phylogeny of the family Hartmannellidae, including Microcystis-associated strains of Copromyxa (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of C. microcystidis showing locomotive trophozoites (17, 10) containing a pronounced hyaline cap (white arrowheads), a vesicular nucleus with globular nucleolus (white arrows), big crystals (black arrows) and Microcystis cells inside food vacuoles (black arrowheads), non-oriented moving trophozoites (89, 11), a grazing amoeba capturing a Microcystis cell (1214), the floating form (15) and a double-walled cyst stage (16). C LM pictures of C. vandevyveri showing locomotive trophozoites (1, 69), trophozoites during non-oriented movement (25, 1012) and floating forms (1315). Black arrows indicate the presence of small, refractive crystals in the cytoplasm, the white arrow shows the vesicular nucleus with a globular lacuna-containing nucleolus, white arrowheads indicate a pronounced hyaline cap. Ingested Microcystis cells are visible in (9) and (11). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538723" httpUri="https://zenodo.org/record/12538723/files/figure.png" pageId="13" pageNumber="74">4</figureCitation>
,
<figureCitation id="12BA7595FFADFF81FAA7FAC7FA7A651F" box="[1395,1410,1283,1310]" captionStart="Fig" captionStartId="12.[132,167,1863,1885]" captionTargetBox="[132,1457,1336,1835]" captionTargetId="figure-482@12.[132,1457,1336,1835]" captionTargetPageId="12" captionText="Fig. 5. LM pictures of Schoutedamoeba minuta showing trophozoites in non-oriented movement (af) and the limax-shaped locomotive form (gi). The presence of a pronounced hyaline cap, small adhesive uroidal filaments and tiny granules in the cytoplasm are indicated with white arrowheads, black arrows and a white arrow respectively. Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538725" httpUri="https://zenodo.org/record/12538725/files/figure.png" pageId="13" pageNumber="74">5</figureCitation>
) or rarely plicate with a length of maximal 13 µm (
<figureCitation id="12BA7595FFADFF81FAAEFAE1FCB36563" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="13" pageNumber="74">Figs 7B</figureCitation>
<figureCitation id="12BA7595FFADFF81FC87FA8CFC9B6563" box="[851,867,1352,1378]" captionStart="Fig" captionStartId="17.[125,160,1778,1800]" captionTargetId="figure-10@18.[148,1448,222,1933]" captionTargetPageId="18" captionText="Fig. 8. A 18S rDNA maximum likelihood phylogeny of Angulamoeba. Sequences new for this study are indicated in bold. ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of Angulamoeba microcystivorans (strains A1WVB (1, 2, 4) and A4WVB (3)) showing the characteristic rusty-colored plasmodium-like mucilage matrix with embedded trophozoites devouring a culture of Microcystis aeruginosa colonies (12), multi-vacuolated trophozoites that are seemingly connected by their filopodia (3) and amoeba-flagellates in different stages of transition (4). Scale bars: 200 µm (1), 100 µm (2), 20 µm (3, 4)." figureDoi="http://doi.org/10.5281/zenodo.12538733" httpUri="https://zenodo.org/record/12538733/files/figure.png" pageId="13" pageNumber="74">8</figureCitation>
, 9). The slightly ovoid vesicular nucleus was 35 µm in diameter and contained one globular nucleolus of 12 µm. Only one, centrally located contractile vacuole was visible in each trophozoite. The granuloplasm contained many, 12 µm long, opaque granules and up to 20 irregular, sometimes plate-like shaped crystals of 16 µm long. With bright field illumination easily visible micro-scales were about 0.9 µm long and 0.6 µm wide. These entirely covered the tectum, forming a regular punctuation of the hyaloplasm up to the cells margin (
<figureCitation id="12BA7595FFADFF81FC5AF965FC1866BA" box="[910,992,1697,1723]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="13" pageNumber="74">Fig.7B</figureCitation>
<figureCitation id="12BA7595FFADFF81FC3EF965FC0266BA" box="[1002,1018,1697,1723]" captionStart="Fig" captionStartId="17.[125,160,1778,1800]" captionTargetId="figure-10@18.[148,1448,222,1933]" captionTargetPageId="18" captionText="Fig. 8. A 18S rDNA maximum likelihood phylogeny of Angulamoeba. Sequences new for this study are indicated in bold. ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of Angulamoeba microcystivorans (strains A1WVB (1, 2, 4) and A4WVB (3)) showing the characteristic rusty-colored plasmodium-like mucilage matrix with embedded trophozoites devouring a culture of Microcystis aeruginosa colonies (12), multi-vacuolated trophozoites that are seemingly connected by their filopodia (3) and amoeba-flagellates in different stages of transition (4). Scale bars: 200 µm (1), 100 µm (2), 20 µm (3, 4)." figureDoi="http://doi.org/10.5281/zenodo.12538733" httpUri="https://zenodo.org/record/12538733/files/figure.png" pageId="13" pageNumber="74">8</figureCitation>
). The trophozoites could also adopt a globular to ovoid bell-shaped form that had a length of 830 µm (13) and a width of 822 µm (11). These were predominantly seen attached when feeding on
<taxonomicName id="4D811293FFAFFF83FFA9FE83FEFD6161" authority="Lemmermann, 1907 " box="[125,261,327,352]" class="Cyanobacteriia" family="Microcystaceae" genus="Microcystis" kingdom="Bacteria" order="Cyanobacteriales" pageId="15" pageNumber="76" phylum="Cyanobacteria" rank="genus">
<emphasis id="B8F5B502FFAFFF83FFA9FE83FEFD6161" box="[125,261,327,352]" italics="true" pageId="15" pageNumber="76">Microcystis</emphasis>
</taxonomicName>
colonies (
<figureCitation id="12BA7595FFAFFF83FEABFE82FE216160" box="[383,473,326,353]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="15" pageNumber="76">Fig. 7B</figureCitation>
11). The clear peripheral hyaloplasmic sheet around the cell was then completely retracted with the exception of a small zone posteriorly where the hyaloplasm was clearly folded towards the substratum (for instance a
<taxonomicName id="4D811293FFAFFF83FE0DFE15FD9961EB" authority="Lemmermann, 1907 " box="[473,609,465,490]" class="Cyanobacteriia" family="Microcystaceae" genus="Microcystis" kingdom="Bacteria" order="Cyanobacteriales" pageId="15" pageNumber="76" phylum="Cyanobacteria" rank="genus">
<emphasis id="B8F5B502FFAFFF83FE0DFE15FD9961EB" box="[473,609,465,490]" italics="true" pageId="15" pageNumber="76">Microcystis</emphasis>
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cell). When a potential food item was detected, this fringe of folded hyaloplasm did produce some small hyaline subpseudopodia that started surrounding the object of interest (
<figureCitation id="12BA7595FFAFFF83FF51FD9EFF1B6274" box="[133,227,602,629]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="15" pageNumber="76">Figs 7B</figureCitation>
<figureCitation id="12BA7595FFAFFF83FF3DFD9EFF026275" box="[233,250,602,628]" captionStart="Fig" captionStartId="13.[125,160,1833,1855]" captionTargetId="figure-9@14.[135,1460,257,1939]" captionTargetPageId="14" captionText="Fig. 6. A 18S rDNA maximum likelihood phylogeny of Vexillifera, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive (17, 1213) and floating (811) amoebae. Microcystis cells inside food vacuoles are visible in (12) and (13). The arrow in (5) points to a temporal, uroid-like structure sometimes visible during locomotion. Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538727" httpUri="https://zenodo.org/record/12538727/files/figure.png" pageId="15" pageNumber="76">6</figureCitation>
,
<figureCitation id="12BA7595FFAFFF83FED2FD9FFEEF6274" box="[262,279,603,629]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="15" pageNumber="76">7</figureCitation>
). Under a coverslip, this bell-shaped form could swiftly transform into a locomotive form with the re-formation of the peripheral hyaloplasmic sheet. The posterior fringe of folded hyaloplasm was then still visible for a while when it slowly retracted (
<figureCitation id="12BA7595FFAFFF83FDB5FD20FD4762FE" box="[609,703,740,767]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="15" pageNumber="76">Figs 7B</figureCitation>
<figureCitation id="12BA7595FFAFFF83FD12FD21FD2E62FE" box="[710,726,741,767]" captionStart="Fig" captionStartId="17.[125,160,1778,1800]" captionTargetId="figure-10@18.[148,1448,222,1933]" captionTargetPageId="18" captionText="Fig. 8. A 18S rDNA maximum likelihood phylogeny of Angulamoeba. Sequences new for this study are indicated in bold. ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of Angulamoeba microcystivorans (strains A1WVB (1, 2, 4) and A4WVB (3)) showing the characteristic rusty-colored plasmodium-like mucilage matrix with embedded trophozoites devouring a culture of Microcystis aeruginosa colonies (12), multi-vacuolated trophozoites that are seemingly connected by their filopodia (3) and amoeba-flagellates in different stages of transition (4). Scale bars: 200 µm (1), 100 µm (2), 20 µm (3, 4)." figureDoi="http://doi.org/10.5281/zenodo.12538733" httpUri="https://zenodo.org/record/12538733/files/figure.png" pageId="15" pageNumber="76">8</figureCitation>
, 9). Floating amoebae were globular to ovoid with a diameter of 820 µm (13), containing 28 long thin pseudopodia of maximal 36 µm long (
<figureCitation id="12BA7595FFAFFF83FDC1FC88FD886366" box="[533,624,844,871]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="15" pageNumber="76">Fig. 7B</figureCitation>
12, 13). No cyst stage was observed. Although this strain initially grew well with
<taxonomicName id="4D811293FFAFFF83FEE3FC56FE4763AA" authority="Lemmermann, 1907 " box="[311,447,914,939]" class="Cyanobacteriia" family="Microcystaceae" genus="Microcystis" kingdom="Bacteria" order="Cyanobacteriales" pageId="15" pageNumber="76" phylum="Cyanobacteria" rank="genus">
<emphasis id="B8F5B502FFAFFF83FEE3FC56FE4763AA" box="[311,447,914,939]" italics="true" pageId="15" pageNumber="76">Microcystis</emphasis>
</taxonomicName>
offered as food it suddenly died after several weeks. Due to this early loss, no TEM analysis could be carried out to retrieve detailed information on the scale structure.
</paragraph>
<caption id="DEFE3998FFADFF81FFA9F8EDFAFB6792" ID-DOI="http://doi.org/10.5281/zenodo.12538727" ID-Zenodo-Dep="12538727" httpUri="https://zenodo.org/record/12538727/files/figure.png" pageId="13" pageNumber="74" startId="13.[125,160,1833,1855]" targetBox="[135,1460,265,1939]" targetPageId="14" targetType="figure">
<paragraph id="8A3E6910FFADFF81FFA9F8EDFAFB6792" blockId="13.[125,1456,1833,1940]" pageId="13" pageNumber="74">
<emphasis id="B8F5B502FFADFF81FFA9F8EDFF2C673F" bold="true" box="[125,212,1833,1855]" pageId="13" pageNumber="74">Fig. 6. A</emphasis>
18S rDNA maximum likelihood phylogeny of
<taxonomicName id="4D811293FFADFF81FD62F8EEFCE1673E" box="[694,793,1834,1855]" class="Discosea" family="Vexilliferidae" genus="Vexillifera" kingdom="Protozoa" order="Dactylopodida" pageId="13" pageNumber="74" phylum="Amoebozoa" rank="genus">
<emphasis id="B8F5B502FFADFF81FD62F8EEFCE1673E" box="[694,793,1834,1855]" italics="true" pageId="13" pageNumber="74">Vexillifera</emphasis>
</taxonomicName>
, including the
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<emphasis id="B8F5B502FFADFF81FC78F8EEFBE3673E" box="[940,1051,1834,1855]" italics="true" pageId="13" pageNumber="74">Microcystis</emphasis>
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-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names.
<emphasis id="B8F5B502FFADFF81FFA9F8A6FF756776" bold="true" box="[125,141,1890,1911]" pageId="13" pageNumber="74">B</emphasis>
LM pictures of locomotive (17, 1213) and floating (811) amoebae.
<taxonomicName id="4D811293FFADFF81FC82F8A6FC3D6776" authority="Lemmermann, 1907 " box="[854,965,1890,1911]" class="Cyanobacteriia" family="Microcystaceae" genus="Microcystis" kingdom="Bacteria" order="Cyanobacteriales" pageId="13" pageNumber="74" phylum="Cyanobacteria" rank="genus">
<emphasis id="B8F5B502FFADFF81FC82F8A6FC3D6776" box="[854,965,1890,1911]" italics="true" pageId="13" pageNumber="74">Microcystis</emphasis>
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cells inside food vacuoles are visible in (12) and (13). The arrow in (5) points to a temporal, uroid-like structure sometimes visible during locomotion. Scale bars: 20 µm.
</paragraph>
</caption>
<paragraph id="8A3E6910FFAFFF83FF77FBDFFC4A6161" blockId="15.[125,772,223,1665]" lastBlockId="15.[809,1456,222,352]" pageId="15" pageNumber="76">
Around 20 mainly morphologically defined
<taxonomicName id="4D811293FFAFFF83FD6FFBDFFEAA6459" pageId="15" pageNumber="76">
<emphasis id="B8F5B502FFAFFF83FD6FFBDFFF0C6459" italics="true" pageId="15" pageNumber="76">Cochliopodium</emphasis>
species
</taxonomicName>
currently exist (
<bibRefCitation id="EE1014E1FFAFFF83FDC2FBFAFD0E6459" author="Geisen S. &amp; Kudryavtsev A. &amp; Bonkowski M. &amp; Smirnov A." box="[534,758,1086,1112]" pageId="15" pageNumber="76" pagination="364 - 383" refId="ref17456" refString="Geisen S., Kudryavtsev A., Bonkowski M., Smirnov A. (2014) Discrepancy between species borders at morphological and molecular levels in the genus Cochliopodium (Amoebozoa, Himatismenida), with the description of Cochliopodium plurinucleolum n. sp. Protist 165: 364 - 383" type="journal article" year="2014">
Geisen
<emphasis id="B8F5B502FFAFFF83FDA6FBFBFD5F6459" box="[626,679,1086,1112]" italics="true" pageId="15" pageNumber="76">et al</emphasis>
. 2014
</bibRefCitation>
), 8 isolated from freshwater, 2 from fresh to brackish water, 3 from brackish, 4 from marine and 3 from terrestrial habitats. Of the 3 freshwater strains without molecular data,
<taxonomicName id="4D811293FFAFFF83FEC6FB0CFE6364E3" box="[274,411,1224,1250]" class="Discosea" family="Cochliopodiidae" genus="Cochliopodium" kingdom="Protozoa" order="Himatismenida" pageId="15" pageNumber="76" phylum="Amoebozoa" rank="species" species="minutum">
<emphasis id="B8F5B502FFAFFF83FEC6FB0CFE6364E3" box="[274,411,1224,1250]" italics="true" pageId="15" pageNumber="76">C. minutum</emphasis>
</taxonomicName>
was assigned a
<emphasis id="B8F5B502FFAFFF83FD82FB0DFCFB64E3" box="[598,771,1224,1250]" italics="true" pageId="15" pageNumber="76">nomen dubium</emphasis>
(
<bibRefCitation id="EE1014E1FFAFFF83FF51FB2EFE916504" author="Kudryavtsev A." box="[133,361,1258,1285]" pageId="15" pageNumber="76" pagination="77 - 89" refId="ref18044" refString="Kudryavtsev A. (2006) ' Minute' species of Cochliopodium (Himatismenida): Description of three new fresh- and brackish-water species with a new diagnosis for Cochliopodium minus Page, 1976. Eur. J. Protistol. 42: 77 - 89" type="journal article" year="2006">Kudryavtsev 2006</bibRefCitation>
),
<taxonomicName id="4D811293FFAFFF83FE57FB2FFDF56505" box="[387,525,1259,1285]" class="Discosea" family="Cochliopodiidae" genus="Cochliopodium" kingdom="Protozoa" order="Himatismenida" pageId="15" pageNumber="76" phylum="Amoebozoa" rank="species" species="vestitum">
<emphasis id="B8F5B502FFAFFF83FE57FB2FFDF56505" box="[387,525,1259,1285]" italics="true" pageId="15" pageNumber="76">C. vestitum</emphasis>
</taxonomicName>
is more than twice as large (L: 3970 µm, mean 59; W: 4874, mean 65) and has with LM clearly visible spines on the scales (
<bibRefCitation id="EE1014E1FFAFFF83FF51FA96FE98656C" author="Kudryavtsev A." box="[133,352,1362,1389]" pageId="15" pageNumber="76" pagination="123 - 128" refId="ref18015" refString="Kudryavtsev A. (2005) Redescription of Cochliopodium vestitum (Archer, 1871), a freshwater spine-bearing Cochliopodium. Acta Protozool. 44: 123 - 128" type="journal article" year="2005">Kudryavtsev 2005</bibRefCitation>
) and
<taxonomicName id="4D811293FFAFFF83FE76FA96FD07656D" authority="(Penard 1902)" baseAuthorityName="Penard" baseAuthorityYear="1902" box="[418,767,1362,1388]" class="Discosea" family="Cochliopodiidae" genus="Cochliopodium" kingdom="Protozoa" order="Himatismenida" pageId="15" pageNumber="76" phylum="Amoebozoa" rank="species" species="granulatum">
<emphasis id="B8F5B502FFAFFF83FE76FA96FDB5656D" box="[418,589,1362,1388]" italics="true" pageId="15" pageNumber="76">C. granulatum</emphasis>
(
<bibRefCitation id="EE1014E1FFAFFF83FD88FA96FD0E656D" author="Penard E." box="[604,758,1362,1388]" pageId="15" pageNumber="76" refId="ref19052" refString="Penard E. (1902) Faune Rhizopodique du Bassin du Leman. Henry Kundig, Geneva" type="book" year="1902">Penard 1902</bibRefCitation>
)
</taxonomicName>
, apart from also being much larger (generally&gt; 50 µm), has many large subpseudopodia during locomotion and seems to preferably graze on diatoms.
<emphasis id="B8F5B502FFAFFF83FD98FA7EFCFB65D2" box="[588,771,1465,1492]" italics="true" pageId="15" pageNumber="76">
<taxonomicName id="4D811293FFAFFF83FD98FA7EFD0765D2" box="[588,767,1465,1492]" class="Discosea" family="Cochliopodiidae" genus="Cochliopodium" kingdom="Protozoa" order="Himatismenida" pageId="15" pageNumber="76" phylum="Amoebozoa" rank="species" species="minutoidum">C. minutoidum</taxonomicName>
,
</emphasis>
isolated from terrestrial habitats (
<bibRefCitation id="EE1014E1FFAFFF83FDC0FA18FD0E65F6" author="Kudryavtsev A." box="[532,758,1500,1527]" pageId="15" pageNumber="76" pagination="77 - 89" refId="ref18044" refString="Kudryavtsev A. (2006) ' Minute' species of Cochliopodium (Himatismenida): Description of three new fresh- and brackish-water species with a new diagnosis for Cochliopodium minus Page, 1976. Eur. J. Protistol. 42: 77 - 89" type="journal article" year="2006">Kudryavtsev 2006</bibRefCitation>
), is only half as large (L: 820 µm (mean 14), W: 924 (17)). Given the molecular difference, the absence of the above-mentioned morphological features (
<figureCitation id="12BA7595FFAFFF83FD4BF980FD02665F" box="[671,762,1604,1630]" captionStart="Fig" captionStartId="15.[124,159,1777,1799]" captionTargetId="figure-9@16.[190,1408,222,1933]" captionTargetPageId="16" captionText="Fig. 7. A 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (15), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (69), the bell-shaped form on colonies of Microcystis aeruginosa (1011) and floating amoebae (1213). Scale bars: 20 µm." figureDoi="http://doi.org/10.5281/zenodo.12538729" httpUri="https://zenodo.org/record/12538729/files/figure.png" pageId="15" pageNumber="76">Fig. 7B</figureCitation>
) and its specific ecology, our
<taxonomicName id="4D811293FFAFFF83FE2DF9A3FD796681" authority="Lemmermann, 1907 " box="[505,641,1639,1664]" class="Cyanobacteriia" family="Microcystaceae" genus="Microcystis" kingdom="Bacteria" order="Cyanobacteriales" pageId="15" pageNumber="76" phylum="Cyanobacteria" rank="genus">
<emphasis id="B8F5B502FFAFFF83FE2DF9A3FD796681" box="[505,641,1639,1664]" italics="true" pageId="15" pageNumber="76">Microcystis</emphasis>
</taxonomicName>
-associated strain is undoubtedly a new species of
<emphasis id="B8F5B502FFAFFF83FB27FF1AFA4860F9" box="[1267,1456,222,248]" italics="true" pageId="15" pageNumber="76">
<taxonomicName id="4D811293FFAFFF83FB27FF1AFA5460F9" authorityName="Van Wichelen &amp; DHondt &amp; Claeys &amp; Vyverman &amp; Berney &amp; Bass &amp; Vanormelingen" authorityYear="2016" box="[1267,1452,222,248]" class="Discosea" family="Cochliopodiidae" genus="Cochliopodium" kingdom="Protozoa" order="Himatismenida" pageId="15" pageNumber="76" phylum="Amoebozoa" rank="genus">Cochliopodium</taxonomicName>
.
</emphasis>
However, since we lacked detailed information on the scale structure, we opted not to give this taxon an official name.
</paragraph>
</subSubSection>
</treatment>
</document>