227 lines
13 KiB
XML
227 lines
13 KiB
XML
<document ID-DOI="http://dx.doi.org/10.3897/mycokeys.43.25081" ID-GBIF-Dataset="d9c55c7b-4a9f-4045-bd20-09dd6902b3fe" ID-PMC="PMC6290043" ID-Pensoft-Pub="1314-4049--23" ID-PubMed="30568535" ModsDocAuthor="" ModsDocDate="2018" ModsDocID="1314-4049--23" ModsDocOrigin="MycoKeys " ModsDocTitle="Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand" checkinTime="1553125590011" checkinUser="pensoft" docAuthor="Ma, Xiaoya, Nontachaiyapoom, Sureeporn, Jayawardena, Ruvishika S., yde, Kevin D., Gentekaki, Eleni, Zhou, Sixuan, Qian, Yixin, Wen, Tingchi & Kang, Jichuan" docDate="2018" docId="FC23112FBF26C568E55F23B0BDADC31C" docLanguage="en" docName="MycoKeys 43: 23-57" docOrigin="MycoKeys 43" docSource="http://dx.doi.org/10.3897/mycokeys.43.25081" docTitle="Colletotrichum fructicola Prihastuti, L. Cai & K. D. Hyde" docType="treatment" docVersion="4" lastPageNumber="39" masterDocId="FF97FFBBFFBCFFCF2B24FFA89B70FFD8" masterDocTitle="Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand" masterLastPageNumber="57" masterPageNumber="23" pageNumber="37" updateTime="1668136111028" updateUser="ExternalLinkService">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Ma, Xiaoya</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Nontachaiyapoom, Sureeporn</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Jayawardena, Ruvishika S.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>yde, Kevin D.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Gentekaki, Eleni</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhou, Sixuan</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Qian, Yixin</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Wen, Tingchi</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Kang, Jichuan</mods:namePart>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2018</mods:date>
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<mods:detail type="volume">
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<mods:number>43</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>23</mods:start>
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<mods:end>57</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.3897/mycokeys.43.25081</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">http://dx.doi.org/10.3897/mycokeys.43.25081</mods:identifier>
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<mods:identifier type="Pensoft-Pub">1314-4049--23</mods:identifier>
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</mods:mods>
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<treatment ID-GBIF-Taxon="154473865" LSID="urn:lsid:plazi:treatment:FC23112FBF26C568E55F23B0BDADC31C" httpUri="http://treatment.plazi.org/id/FC23112FBF26C568E55F23B0BDADC31C" lastPageId="16" lastPageNumber="39" pageId="14" pageNumber="37">
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<subSubSection pageId="14" pageNumber="37" type="nomenclature">
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<paragraph pageId="14" pageNumber="37">
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<taxonomicName authority="Prihastuti, L. Cai & K. D. Hyde" class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="14" pageNumber="37" phylum="Ascomycota" rank="species" species="fructicola">
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<pageBreakToken pageId="14" pageNumber="37" start="start">Colletotrichum</pageBreakToken>
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fructicola Prihastuti, L. Cai & K.D. Hyde
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</taxonomicName>
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Figure 8
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</paragraph>
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</subSubSection>
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<subSubSection pageId="15" pageNumber="38" type="description">
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<paragraph pageId="15" pageNumber="38">
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<pageBreakToken pageId="15" pageNumber="38" start="start">Description</pageBreakToken>
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.
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</paragraph>
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<paragraph pageId="15" pageNumber="38">
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Asexual morph formed on CMA. Vegetative hyphae 2.6-5
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<normalizedToken originalValue="µm">µm</normalizedToken>
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diam (N=20), smooth-walled, septate, branched, hyaline. Appressoria and chlamydospores not observed. Conidiomata 500
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<normalizedToken originalValue="×">x</normalizedToken>
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400
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(N=3), clustered, sub-globose, smooth-walled, orange. Conidiophores rare, septate, hyaline. Conidia (12.8-) 13.8-16.6 (-18.6)
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<normalizedToken originalValue="×">x</normalizedToken>
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(2.7-) 3.5-7.8 (-16)
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(N=21), L/W = 2.9, ellipsoidal, smooth-walled, septate, hyaline.
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</paragraph>
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<paragraph pageId="15" pageNumber="38">
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Sexual morph forming on CMA. Ascomata globose, pale brown to dark brown. Peridium (131.9-) 138.4-163.6 (-171.5)
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<normalizedToken originalValue="×">x</normalizedToken>
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(120.9-) 123.6-142.1 (-143.2)
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(N=4), composed of medium brown, flattened, angular cells. Setae (53-) 57.2-73.1 (-83.3)
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<normalizedToken originalValue="×">x</normalizedToken>
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(3.4-) 3.5
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<normalizedToken originalValue="–4(–">-4(-</normalizedToken>
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4.1)
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(N=6), grow on the fruiting body, 2-septate, smooth-walled, contracted at the base, apex slightly rounded, brown to dark brown. Asci (57.6-) 61.2-82.6 (-94.3)
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<normalizedToken originalValue="×">x</normalizedToken>
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(8.7-) 9.3-13.3 (-15.8)
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(N=12), cylindrical, unitunicate, 8-spored. Ascospores (10-) 12-20 (-20.9)
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<normalizedToken originalValue="×">x</normalizedToken>
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(3.6-) 4.1-5.2 (-5.3)
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(N=10), L/W = 3.4, ellipsoidal to reniform, somewhat fusiform or acute both ends, 1 to 4 guttules, uni-to bi-seriate, smooth-walled, hyaline.
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</paragraph>
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<paragraph pageId="15" pageNumber="38">Cultures on CMA flat with slight serrated margin. Growth rate: 0.9cm/day, with 14-days for sporulation. Cottony, light brown to white from middle to the margin, reverse white to light brown with black spots. Ascomata gregarious and/or isolated. Acervuli and ascomata sometimes gregarious.</paragraph>
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<caption pageId="15" pageNumber="38">
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<paragraph pageId="15" pageNumber="38">
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Figure 8.
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<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola." order="Botryosphaeriales" pageId="15" pageNumber="38" phylum="Ascomycota" rank="species" species="fructicola.">Colletotrichum fructicola.</taxonomicName>
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A Colony B Conidiomata and ascomata C, D Conidiomata E, F Ascomata
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<normalizedToken originalValue="G–J">G-J</normalizedToken>
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Conidiophores L Setae
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<normalizedToken originalValue="M–Q">M-Q</normalizedToken>
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Asci
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<normalizedToken originalValue="R–V">R-V</normalizedToken>
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Ascospores Scale bars: 500
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(
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<normalizedToken originalValue="B–D">B-D</normalizedToken>
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), 20
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(E, F), 5
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(
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<normalizedToken originalValue="G–J">G-J</normalizedToken>
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), 10
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(L), 10
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(
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<normalizedToken originalValue="M–Q">M-Q</normalizedToken>
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), 5
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(
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<normalizedToken originalValue="R–V">R-V</normalizedToken>
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).
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</paragraph>
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</caption>
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</subSubSection>
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<subSubSection pageId="16" pageNumber="39" type="notes">
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<paragraph pageId="16" pageNumber="39">
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<pageBreakToken pageId="16" pageNumber="39" start="start">Notes</pageBreakToken>
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.
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</paragraph>
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<paragraph pageId="16" pageNumber="39">
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Strains MFLUCC 14-0087, MFLUCC 14-0148 and MFLUCC 15-0262 had the identical sequences to
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<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="16" pageNumber="39" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
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. The ITS and GAPDH sequences of them 100% match with many different unpublished species. Blastn researches with ACT sequence of them results in 99% identity with the ex-holotype culture of
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<taxonomicName lsidName="C. fructicola" pageId="16" pageNumber="39" rank="species" species="fructicola">C. fructicola</taxonomicName>
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strain ICMP 18581 (GenBank JX009501) isolated from
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<taxonomicName class="Magnoliopsida" family="Rubiaceae" genus="Coffea" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Coffea arabica" order="Gentianales" pageId="16" pageNumber="39" phylum="Tracheophyta" rank="species" species="arabica">Coffea arabica</taxonomicName>
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in Thailand (
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<bibRefCitation author="Weir, BS" journalOrPublisher="Studies in Mycology" pageId="26" pageNumber="49" pagination=": 115" title="The Colletotrichumgloeosporioides species complex." url="https://doi.org/10.3114/sim0011" volume="73" year="2012">Weir et al. 2012</bibRefCitation>
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), which we involved it in phylogenetic analysis. TUB2 sequences of them are 99% identity with
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<taxonomicName lsidName="C. boninense" pageId="16" pageNumber="39" rank="species" species="boninense">C. boninense</taxonomicName>
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strain CBS 125502 (GenBank KJ955336) as mentioned above. Their ascomata, conidia, asci and ascospores were also similar. Conidia were the same size as the ex-type strain of the pathogen
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<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="16" pageNumber="39" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
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(9.7-14
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<normalizedToken originalValue="×">x</normalizedToken>
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3-4.3µm) found in coffee berries (
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<bibRefCitation author="Prihastuti, H" journalOrPublisher="Fungal Diversity" pageId="25" pageNumber="48" pagination="89 - 109" title="Characterization of Colletotrichum species associated with coffee berries in northern Thailand." volume="39" year="2009">Prihastuti et al. 2009</bibRefCitation>
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). However, ascomata were much smaller and asci as well as ascospores were much larger than the ex-type from coffee berries. In the protologue,
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<taxonomicName lsidName="C. fructicola" pageId="16" pageNumber="39" rank="species" species="fructicola">C. fructicola</taxonomicName>
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was introduced with ascomata as 345.67
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<normalizedToken originalValue="±">+/-</normalizedToken>
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36.83
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<normalizedToken originalValue="×">x</normalizedToken>
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431.33
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<normalizedToken originalValue="±">+/-</normalizedToken>
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69.89
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<normalizedToken originalValue="μm">μm</normalizedToken>
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, asci as 41.22
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<normalizedToken originalValue="±">+/-</normalizedToken>
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7.02
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<normalizedToken originalValue="×">x</normalizedToken>
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7.61
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<normalizedToken originalValue="±">+/-</normalizedToken>
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0.58
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<normalizedToken originalValue="μm">μm</normalizedToken>
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and ascospores as 11.91
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<normalizedToken originalValue="±">+/-</normalizedToken>
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1.38
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<normalizedToken originalValue="×">x</normalizedToken>
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3.32
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<normalizedToken originalValue="±">+/-</normalizedToken>
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0.35
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<normalizedToken originalValue="μm">μm</normalizedToken>
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. Here we name strains MFLUCC 14-0087, MFLUCC 14-0148 and MFLUCC 15-0262 isolated from leaves of
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<taxonomicName class="Liliopsida" family="Orchidaceae" genus="Dendrobium" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Dendrobium" order="Asparagales" pageId="16" pageNumber="39" phylum="Tracheophyta" rank="genus">Dendrobium</taxonomicName>
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sp. 1 and
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<taxonomicName class="Liliopsida" family="Orchidaceae" genus="Dendrobium" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Dendrobium" order="Asparagales" pageId="16" pageNumber="39" phylum="Tracheophyta" rank="genus">Dendrobium</taxonomicName>
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sp. 3, root of
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<taxonomicName class="Liliopsida" family="Orchidaceae" genus="Dendrobium" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Dendrobium" order="Asparagales" pageId="16" pageNumber="39" phylum="Tracheophyta" rank="genus">Dendrobium</taxonomicName>
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sp. 2 as
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<taxonomicName class="Sordariomycetes" family="Glomerellaceae" genus="Colletotrichum" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Colletotrichum fructicola" order="Glomerellales" pageId="16" pageNumber="39" phylum="Ascomycota" rank="species" species="fructicola">Colletotrichum fructicola</taxonomicName>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |