603 lines
38 KiB
XML
603 lines
38 KiB
XML
<document ID-DOI="http://dx.doi.org/10.3897/mycokeys.78.64853" ID-GBIF-Dataset="8c25c4ca-1cb8-41e9-b73a-f7cd0e61f0ff" ID-PMC="PMC8052298" ID-Pensoft-Pub="1314-4049-78-187" ID-Pensoft-UUID="3C8E803BAD8A5A329FB0B6E372EFFFFE" ID-PubMed="33953639" ModsDocID="1314-4049-78-187" checkinTime="1618085548581" checkinUser="pensoft" docAuthor="He, Lin, Cheng, Hong, Zhao, Lin, Htun, Aye Aye, Yu, Zhi He, Deng, Jian Xin & Li, Qi Li" docDate="2021" docId="42E5E682C70857EE80017DDD3A2EFD75" docLanguage="en" docName="MycoKeys 78: 187-198" docOrigin="MycoKeys 78" docPubDate="2021-04-09" docSource="http://dx.doi.org/10.3897/mycokeys.78.64853" docTitle="Alternaria divaricatae L. He & J. X. Deng 2021, sp. nov." docType="treatment" docVersion="5" id="3C8E803BAD8A5A329FB0B6E372EFFFFE" lastPageNumber="187" masterDocId="3C8E803BAD8A5A329FB0B6E372EFFFFE" masterDocTitle="Morphological and molecular identification of two new Alternaria species (Ascomycota, Pleosporaceae) in section Radicina from China" masterLastPageNumber="198" masterPageNumber="187" pageNumber="187" updateTime="1668136621517" updateUser="ExternalLinkService">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>Morphological and molecular identification of two new Alternaria species (Ascomycota, Pleosporaceae) in section Radicina from China</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>He, Lin</mods:namePart>
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<mods:affiliation>Department of Plant Protection, College of Agriculture, Yangtze University, Jingzhou 434025, China & Forewarning and Management of Agricultural and Forestry Pests, Hubei Engineering Technology Center, Yangtze University, Jingzhou 434025, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Cheng, Hong</mods:namePart>
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<mods:affiliation>Department of Plant Protection, College of Agriculture, Yangtze University, Jingzhou 434025, China & Forewarning and Management of Agricultural and Forestry Pests, Hubei Engineering Technology Center, Yangtze University, Jingzhou 434025, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Zhao, Lin</mods:namePart>
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<mods:affiliation>Department of Plant Protection, College of Agriculture, Yangtze University, Jingzhou 434025, China & Forewarning and Management of Agricultural and Forestry Pests, Hubei Engineering Technology Center, Yangtze University, Jingzhou 434025, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Htun, Aye Aye</mods:namePart>
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<mods:affiliation>Department of Plant Protection, College of Agriculture, Yangtze University, Jingzhou 434025, China & Forewarning and Management of Agricultural and Forestry Pests, Hubei Engineering Technology Center, Yangtze University, Jingzhou 434025, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Yu, Zhi He</mods:namePart>
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<mods:affiliation>Department of Applied Microbiology, College of Life Sciences, Yangtze University, Jingzhou 434025, China</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Deng, Jian Xin</mods:namePart>
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<mods:nameIdentifier type="ORCID">https://orcid.org/0000-0001-7304-5603</mods:nameIdentifier>
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<mods:affiliation>Department of Plant Protection, College of Agriculture, Yangtze University, Jingzhou 434025, China & Forewarning and Management of Agricultural and Forestry Pests, Hubei Engineering Technology Center, Yangtze University, Jingzhou 434025, China</mods:affiliation>
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<mods:nameIdentifier type="email">djxin555@yangtzeu.edu.cn</mods:nameIdentifier>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Li, Qi Li</mods:namePart>
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<mods:affiliation>Institute of Plant Protection, Guangxi Academy of Agricultural Sciences and Guangxi Key Laboratory of Biology for Crop Diseases and Insect Pests, Nanning, Guangxi, 530007, China</mods:affiliation>
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<mods:nameIdentifier type="email">65615384@qq.com</mods:nameIdentifier>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2021</mods:date>
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<mods:detail type="pubDate">
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<mods:number>2021-04-09</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>78</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>187</mods:start>
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<mods:end>198</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.3897/mycokeys.78.64853</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">http://dx.doi.org/10.3897/mycokeys.78.64853</mods:identifier>
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<mods:identifier type="Pensoft-Pub">1314-4049-78-187</mods:identifier>
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<mods:identifier type="Pensoft-UUID">3C8E803BAD8A5A329FB0B6E372EFFFFE</mods:identifier>
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</mods:mods>
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<treatment ID-GBIF-Taxon="180947921" LSID="urn:lsid:plazi:treatment:42E5E682C70857EE80017DDD3A2EFD75" httpUri="http://treatment.plazi.org/id/42E5E682C70857EE80017DDD3A2EFD75" lastPageNumber="187" pageId="0" pageNumber="187">
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||
<subSubSection pageId="0" pageNumber="187" type="nomenclature">
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<paragraph pageId="0" pageNumber="187">
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<taxonomicName LSID="42E5E682-C708-57EE-8001-7DDD3A2EFD75" authority="L. He & J. X. Deng" authorityName="L. He & J. X. Deng" authorityYear="2021" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria divaricatae" order="Pleosporales" pageId="0" pageNumber="187" phylum="Ascomycota" rank="species" species="divaricatae" status="sp. nov.">Alternaria divaricatae L. He & J.X. Deng</taxonomicName>
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<taxonomicNameLabel pageId="0" pageNumber="187">sp. nov.</taxonomicNameLabel>
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<figureCitation captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Morphological characteristics of Alternaria divaricatae (strain: YZU 151055). Colony on PDA for 7 days at 25 ° C (A); Conidia on PCA and V 8 A (B, C); Sporulation patterns from PCA and V 8 A (D-G: D, E from PCA F, G from V 8 A); Scale bars: 25 µm (B, C); 2 µm (D, F); 50 µm (E); 100 µm (G)." figureDoi="10.3897/mycokeys.78.64853.figure2" httpUri="https://binary.pensoft.net/fig/530236" pageId="0" pageNumber="187">Figure 2</figureCitation>
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</paragraph>
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||
</subSubSection>
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||
<subSubSection pageId="0" pageNumber="187" type="materials_examined">
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<paragraph pageId="0" pageNumber="187">
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<typeStatus>Type</typeStatus>
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.
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</paragraph>
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<paragraph pageId="0" pageNumber="187">
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<materialsCitation ID-GBIF-Occurrence="3069853301" collectingDate="2021-01-01" collectingDateMax="2021-12-31" collectingDateMin="2021-01-01" collectorName="J. X Deng" country="China" county="Wenjiang District" location="Chengdu University of Traditional Chinese Medicine" municipality="Herb Garden of Chengdu University" specimenCount="1" stateProvince="Sichuan Province" typeStatus="holotype">
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<collectingCountry name="China">China</collectingCountry>
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,
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<collectingRegion country="China" name="Sichuan">Sichuan Province</collectingRegion>
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, Chengdu City,
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<collectingCounty>Wenjiang District</collectingCounty>
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,
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<collectingMunicipality>
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Herb Garden of
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<location LSID="urn:lsid:plazi:treatment:42E5E682C70857EE80017DDD3A2EFD75:FF11B9E1524788309C1D3636B7A96374" country="China" county="Wenjiang District" municipality="Herb Garden of Chengdu University" name="Chengdu University of Traditional Chinese Medicine" stateProvince="Sichuan Province">Chengdu University of Traditional Chinese Medicine</location>
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</collectingMunicipality>
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, from leaf spot of
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<taxonomicName class="Dicotyledoneae" family="Apiaceae" genus="Saposhnikovia" higherTaxonomySource="GBIF" kingdom="Plantae" lsidName="Saposhnikovia divaricata" order="Apiales" pageId="0" pageNumber="187" phylum="Angiospermae" rank="species" species="divaricata">
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<emphasis italics="true" pageId="0" pageNumber="187">Saposhnikovia divaricata</emphasis>
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</taxonomicName>
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. 17 June, 2015,
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<collectorName>J.X Deng</collectorName>
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, (YZU-H-0029,
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<typeStatus>holotype</typeStatus>
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), ex-type culture YZU 151055
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="187" type="etymology">
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<paragraph pageId="0" pageNumber="187">Etymology.</paragraph>
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<paragraph pageId="0" pageNumber="187">
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In reference to the host species name,
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<taxonomicName class="Dicotyledoneae" family="Apiaceae" genus="Saposhnikovia" higherTaxonomySource="GBIF" kingdom="Plantae" lsidName="Saposhnikovia divaricata" order="Apiales" pageId="0" pageNumber="187" phylum="Angiospermae" rank="species" species="divaricata">
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<emphasis italics="true" pageId="0" pageNumber="187">Saposhnikovia divaricata</emphasis>
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</taxonomicName>
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.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="187" type="description">
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<paragraph pageId="0" pageNumber="187">Description.</paragraph>
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<paragraph pageId="0" pageNumber="187">
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<emphasis italics="true" pageId="0" pageNumber="187">Colonies</emphasis>
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on PDA (Fig.
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<figureCitation captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Morphological characteristics of Alternaria divaricatae (strain: YZU 151055). Colony on PDA for 7 days at 25 ° C (A); Conidia on PCA and V 8 A (B, C); Sporulation patterns from PCA and V 8 A (D-G: D, E from PCA F, G from V 8 A); Scale bars: 25 µm (B, C); 2 µm (D, F); 50 µm (E); 100 µm (G)." figureDoi="10.3897/mycokeys.78.64853.figure2" httpUri="https://binary.pensoft.net/fig/530236" pageId="0" pageNumber="187">2A</figureCitation>
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) vinaceous buff, hazel in the center, velvety, cottony, dark mouse grey to pale mouse grey in reverse, 56-64 mm in diam.; On PCA,
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<emphasis italics="true" pageId="0" pageNumber="187">conidiophores</emphasis>
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arising directly from lateral or apical of aerial hyphae or medium, lightly flexuous, sometimes geniculate at apex, smooth-walled, 9-36
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<normalizedToken originalValue="×">x</normalizedToken>
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3.5-6
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<normalizedToken originalValue="μm">μm</normalizedToken>
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, 1-3 transverse septa, the aerial hyphae sometimes up to 82-400
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<normalizedToken originalValue="×">x</normalizedToken>
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4-6
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<normalizedToken originalValue="μm">μm</normalizedToken>
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;
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<emphasis italics="true" pageId="0" pageNumber="187">conidia</emphasis>
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solitary from apex or geniculate loci, short-ovoid, subglobose, ellipsoid, 21-38
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<normalizedToken originalValue="×">x</normalizedToken>
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12-26
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<normalizedToken originalValue="μm">μm</normalizedToken>
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, with 1-4 transverse septa and 1-4 longitudinal septa (Fig.
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<figureCitation captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Morphological characteristics of Alternaria divaricatae (strain: YZU 151055). Colony on PDA for 7 days at 25 ° C (A); Conidia on PCA and V 8 A (B, C); Sporulation patterns from PCA and V 8 A (D-G: D, E from PCA F, G from V 8 A); Scale bars: 25 µm (B, C); 2 µm (D, F); 50 µm (E); 100 µm (G)." figureDoi="10.3897/mycokeys.78.64853.figure2" httpUri="https://binary.pensoft.net/fig/530236" pageId="0" pageNumber="187">2B, D, E</figureCitation>
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); On V8A,
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<emphasis italics="true" pageId="0" pageNumber="187">conidiophores</emphasis>
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10-26 (-53)
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<normalizedToken originalValue="×">x</normalizedToken>
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3-4
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<normalizedToken originalValue="μm">μm</normalizedToken>
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, 1-7 transverse septa,
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<emphasis italics="true" pageId="0" pageNumber="187">conidia</emphasis>
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22-39
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<normalizedToken originalValue="×">x</normalizedToken>
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13-24
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<normalizedToken originalValue="μm">μm</normalizedToken>
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, 1-4 transverse septa, 1-3 longitudinal or oblique between septa (Fig.
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<figureCitation captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Morphological characteristics of Alternaria divaricatae (strain: YZU 151055). Colony on PDA for 7 days at 25 ° C (A); Conidia on PCA and V 8 A (B, C); Sporulation patterns from PCA and V 8 A (D-G: D, E from PCA F, G from V 8 A); Scale bars: 25 µm (B, C); 2 µm (D, F); 50 µm (E); 100 µm (G)." figureDoi="10.3897/mycokeys.78.64853.figure2" httpUri="https://binary.pensoft.net/fig/530236" pageId="0" pageNumber="187">2C, F, G</figureCitation>
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). There was no secondary conidium production observed on PCA and V8A medium.
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</paragraph>
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<caption doi="10.3897/mycokeys.78.64853.figure2" httpUri="https://binary.pensoft.net/fig/530236" pageId="0" pageNumber="187" start="Figure 2" startId="F2">
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<paragraph pageId="0" pageNumber="187">
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<emphasis bold="true" pageId="0" pageNumber="187">Figure 2.</emphasis>
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Morphological characteristics of
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<taxonomicName authorityName="L. He & J. X. Deng" authorityYear="2021" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria divaricatae" order="Pleosporales" pageId="0" pageNumber="187" phylum="Ascomycota" rank="species" species="divaricatae">
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<emphasis italics="true" pageId="0" pageNumber="187">Alternaria divaricatae</emphasis>
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</taxonomicName>
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(strain: YZU 151055). Colony on PDA for 7 days at 25 °C (
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<emphasis bold="true" pageId="0" pageNumber="187">A</emphasis>
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); Conidia on PCA and V8A (
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<emphasis bold="true" pageId="0" pageNumber="187">B, C</emphasis>
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); Sporulation patterns from PCA and V8A (
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<emphasis bold="true" pageId="0" pageNumber="187">D-G</emphasis>
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:
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<emphasis bold="true" pageId="0" pageNumber="187">D, E</emphasis>
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from PCA
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<emphasis bold="true" pageId="0" pageNumber="187">F, G</emphasis>
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from V8A); Scale bars: 25
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(
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<emphasis bold="true" pageId="0" pageNumber="187">B, C</emphasis>
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); 2
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(
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<emphasis bold="true" pageId="0" pageNumber="187">D, F</emphasis>
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); 50
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(
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<emphasis bold="true" pageId="0" pageNumber="187">E</emphasis>
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); 100
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<normalizedToken originalValue="µm">µm</normalizedToken>
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(
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<emphasis bold="true" pageId="0" pageNumber="187">G</emphasis>
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).
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</paragraph>
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</caption>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="187" type="additional isolate examined">
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<paragraph pageId="0" pageNumber="187">Additional isolate examined.</paragraph>
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<paragraph pageId="0" pageNumber="187">
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China, Sichuan Province, Chengdu City, Wenjiang District, Herb Garden of Chengdu University of Traditional Chinese Medicine, from leaf spot of
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<taxonomicName class="Dicotyledoneae" family="Apiaceae" genus="Saposhnikovia" higherTaxonomySource="GBIF" kingdom="Plantae" lsidName="Saposhnikovia divaricata" order="Apiales" pageId="0" pageNumber="187" phylum="Angiospermae" rank="species" species="divaricata">
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<emphasis italics="true" pageId="0" pageNumber="187">Saposhnikovia divaricata</emphasis>
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</taxonomicName>
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. 17 June, 2015, L He, living culture YZU 151059.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="187" type="notes">
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<paragraph pageId="0" pageNumber="187">Notes.</paragraph>
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<paragraph pageId="0" pageNumber="187">
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Phylogenetically,
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<taxonomicName authorityName="L. He & J. X. Deng" authorityYear="2021" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria divaricatae" order="Pleosporales" pageId="0" pageNumber="187" phylum="Ascomycota" rank="species" species="divaricatae">
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<emphasis italics="true" pageId="0" pageNumber="187">Alternaria divaricatae</emphasis>
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</taxonomicName>
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forms a distinct clade in section
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<taxonomicName authorityName="Meier, Drechsler & E.D.Eddy" authorityYear="1922" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="" order="Pleosporales" pageId="0" pageNumber="187" phylum="Ascomycota" rank="section" section="Radicina">Radicina</taxonomicName>
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, which appears to be sister to a clade including
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<taxonomicName lsidName="A. petroselini" pageId="0" pageNumber="187" rank="species" species="petroselini">
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<emphasis italics="true" pageId="0" pageNumber="187">A. petroselini</emphasis>
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</taxonomicName>
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,
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<taxonomicName lsidName="A. selini" pageId="0" pageNumber="187" rank="species" species="selini">
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<emphasis italics="true" pageId="0" pageNumber="187">A. selini</emphasis>
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</taxonomicName>
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and
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<taxonomicName lsidName="A. vulgarae" pageId="0" pageNumber="187" rank="species" species="vulgarae">
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<emphasis italics="true" pageId="0" pageNumber="187">A. vulgarae</emphasis>
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</taxonomicName>
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(Fig.
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<figureCitation captionStart="Figure 1" captionStartId="F1" captionText="Figure 1. Phylogenetic tree based on the combined gene sequences of ITS, TEF 1, GAPDH, and RPB 2. The Bayesian posterior probabilities> 0.70 (PP), maximum likelihood and maximum parsimony bootstrap support values> 70 (BS) are given at the nodes (PP / BS). Examined strains are in bold." figureDoi="10.3897/mycokeys.78.64853.figure1" httpUri="https://binary.pensoft.net/fig/530235" pageId="0" pageNumber="187">1</figureCitation>
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). Morphologically,
|
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<taxonomicName lsidName="A. divaricatae" pageId="0" pageNumber="187" rank="species" species="divaricatae">
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<emphasis italics="true" pageId="0" pageNumber="187">A. divaricatae</emphasis>
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</taxonomicName>
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was different from
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<taxonomicName lsidName="A. petroselini" pageId="0" pageNumber="187" rank="species" species="petroselini">
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<emphasis italics="true" pageId="0" pageNumber="187">A. petroselini</emphasis>
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</taxonomicName>
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,
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<taxonomicName lsidName="A. selini" pageId="0" pageNumber="187" rank="species" species="selini">
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<emphasis italics="true" pageId="0" pageNumber="187">A. selini</emphasis>
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</taxonomicName>
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and
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<taxonomicName lsidName="A. vulgarae" pageId="0" pageNumber="187" rank="species" species="vulgarae">
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<emphasis italics="true" pageId="0" pageNumber="187">A. vulgarae</emphasis>
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</taxonomicName>
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by producing smaller conidia (Table
|
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<tableCitation captionStart="Table 2" captionStartId="T2" captionText="Table 2. Morphological comparison of the present species and other Altenraria species in section Altenraria Radicina" httpUri="http://table.plazi.org/id/4CE987FE318663FED09E9F2ABF20170C" pageId="0" pageNumber="187" tableUuid="4CE987FE318663FED09E9F2ABF20170C">2</tableCitation>
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) and special sporulation from apex or geniculate loci of lateral or apical of aerial hyphae. Moreover,
|
||
<taxonomicName lsidName="A. chlamydosporifera" pageId="0" pageNumber="187" rank="species" species="chlamydosporifera">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. chlamydosporifera</emphasis>
|
||
</taxonomicName>
|
||
,
|
||
<taxonomicName lsidName="A. glehniae" pageId="0" pageNumber="187" rank="species" species="glehniae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. glehniae</emphasis>
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName lsidName="A. smyrnii" pageId="0" pageNumber="187" rank="species" species="smyrnii">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. smyrnii</emphasis>
|
||
</taxonomicName>
|
||
grouped together and clustered as a sister clade with
|
||
<taxonomicName lsidName="A. divaricatae" pageId="0" pageNumber="187" rank="species" species="divaricatae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. divaricatae</emphasis>
|
||
</taxonomicName>
|
||
,
|
||
<taxonomicName lsidName="A. petroselini" pageId="0" pageNumber="187" rank="species" species="petroselini">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. petroselini</emphasis>
|
||
</taxonomicName>
|
||
,
|
||
<taxonomicName lsidName="A. selini" pageId="0" pageNumber="187" rank="species" species="selini">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. selini</emphasis>
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName lsidName="A. vulgarae" pageId="0" pageNumber="187" rank="species" species="vulgarae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. vulgarae</emphasis>
|
||
</taxonomicName>
|
||
(Fig.
|
||
<figureCitation captionStart="Figure 1" captionStartId="F1" captionText="Figure 1. Phylogenetic tree based on the combined gene sequences of ITS, TEF 1, GAPDH, and RPB 2. The Bayesian posterior probabilities> 0.70 (PP), maximum likelihood and maximum parsimony bootstrap support values> 70 (BS) are given at the nodes (PP / BS). Examined strains are in bold." figureDoi="10.3897/mycokeys.78.64853.figure1" httpUri="https://binary.pensoft.net/fig/530235" pageId="0" pageNumber="187">1</figureCitation>
|
||
). Obviously, the conidia of
|
||
<taxonomicName lsidName="A. divaricatae" pageId="0" pageNumber="187" rank="species" species="divaricatae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. divaricatae</emphasis>
|
||
</taxonomicName>
|
||
was smaller than
|
||
<taxonomicName lsidName="A. smyrnii" pageId="0" pageNumber="187" rank="species" species="smyrnii">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. smyrnii</emphasis>
|
||
</taxonomicName>
|
||
(Table
|
||
<tableCitation captionStart="Table 2" captionStartId="T2" captionText="Table 2. Morphological comparison of the present species and other Altenraria species in section Altenraria Radicina" httpUri="http://table.plazi.org/id/4CE987FE318663FED09E9F2ABF20170C" pageId="0" pageNumber="187" tableUuid="4CE987FE318663FED09E9F2ABF20170C">2</tableCitation>
|
||
) and
|
||
<taxonomicName lsidName="A. divaricatae" pageId="0" pageNumber="187" rank="species" species="divaricatae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. divaricatae</emphasis>
|
||
</taxonomicName>
|
||
could be also easily differentiated from
|
||
<taxonomicName lsidName="A. chlamydosporifera" pageId="0" pageNumber="187" rank="species" species="chlamydosporifera">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. chlamydosporifera</emphasis>
|
||
</taxonomicName>
|
||
by the lack of chlamydospores in culture (
|
||
<bibRefCitation DOI="https://doi.org/10.1016/j.simyco.2019.05.001" author="Marin-Felix, Y" journalOrPublisher="Studies in Mycology" pageId="0" pageNumber="187" pagination="1 - 124" refId="B20" refString="Marin-Felix, Y, Hernandez-Restrepo, M, Iturrieta-Gonzalez, I, Garcia, D, Gene, J, Groenewald, JZ, Cai, L, Chen, Q, Quaedvlieg, W, Schumacher, RK, Taylor, PWJ, Ambers, C, Bonthond, G, Edwards, J, Krueger-Hadfield, SA, Luangsa-ard, JJ, Morton, L, Moslemi, A, Sandoval-Denis, M, Tan, YP, Thangavel, R, Vaghefi, N, Cheewangkoon, R, Crous, PW, 2019. Genera of phytopathogenic fungi: GOPHY 3. Studies in Mycology 94: 1 - 124, DOI: https://doi.org/10.1016/j.simyco.2019.05.001" title="Genera of phytopathogenic fungi: GOPHY 3." url="https://doi.org/10.1016/j.simyco.2019.05.001" volume="94" year="2019">Marin-Felix et al. 2019</bibRefCitation>
|
||
). Meanwhile,
|
||
<taxonomicName lsidName="A. glehniae" pageId="0" pageNumber="187" rank="species" species="glehniae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. glehniae</emphasis>
|
||
</taxonomicName>
|
||
was distinguished from
|
||
<taxonomicName lsidName="A. divaricatae" pageId="0" pageNumber="187" rank="species" species="divaricatae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. divaricatae</emphasis>
|
||
</taxonomicName>
|
||
by its single conidium on apex of conidiophore (there was no geniculate sporulation loci) and production of secondary conidium (
|
||
<bibRefCitation DOI="https://doi.org/10.11646/phytotaxa.397.2.4" author="Tao, YQ" journalOrPublisher="Phytotaxa" pageId="0" pageNumber="187" pagination="169 - 176" refId="B33" refString="Tao, YQ, Jia, GG, Aung, SLL, Wu, QL, Lu, HX, Deng, JX, 2019. Multigene phylogeny and morphology of Alternaria reveal a novel species and a new record in china. Phytotaxa 397 (2): 169 - 176, DOI: https://doi.org/10.11646/phytotaxa.397.2.4" title="Multigene phylogeny and morphology of Alternaria reveal a novel species and a new record in china." url="https://doi.org/10.11646/phytotaxa.397.2.4" volume="397" year="2019">Tao et al. 2019</bibRefCitation>
|
||
). In addition,
|
||
<taxonomicName lsidName="A. radicina" pageId="0" pageNumber="187" rank="species" species="radicina">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. radicina</emphasis>
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName lsidName="A. carotiincultae" pageId="0" pageNumber="187" rank="species" species="carotiincultae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. carotiincultae</emphasis>
|
||
</taxonomicName>
|
||
were distinguished from present species by distant phylogenetic relationship in section
|
||
<taxonomicName lsidName="" pageId="0" pageNumber="187" rank="section" section="Radicina">Radicina</taxonomicName>
|
||
.
|
||
</paragraph>
|
||
<caption ID-Table-UUID="4CE987FE318663FED09E9F2ABF20170C" httpUri="http://table.plazi.org/id/4CE987FE318663FED09E9F2ABF20170C" pageId="0" pageNumber="187" start="Table 2" startId="T2">
|
||
<paragraph pageId="0" pageNumber="187">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">Table 2.</emphasis>
|
||
Morphological comparison of the present species and other
|
||
<taxonomicName genus="Altenraria" lsidName="Altenraria" pageId="0" pageNumber="187" rank="genus">Altenraria</taxonomicName>
|
||
species in section
|
||
<taxonomicName genus="Altenraria" lsidName="Altenraria" pageId="0" pageNumber="187" rank="section" section="Radicina">Altenraria Radicina</taxonomicName>
|
||
</paragraph>
|
||
</caption>
|
||
<paragraph pageId="0" pageNumber="187">
|
||
<table pageId="0" pageNumber="187">
|
||
<tr pageId="0" pageNumber="187">
|
||
<th colspan="1" pageId="0" pageNumber="187" rowspan="2">Species</th>
|
||
<th colspan="3" pageId="0" pageNumber="187" rowspan="1">Conidia</th>
|
||
<th colspan="1" pageId="0" pageNumber="187" rowspan="2">Conidia per chain</th>
|
||
<th colspan="1" pageId="0" pageNumber="187" rowspan="2">Medium</th>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<th colspan="1" pageId="0" pageNumber="187" rowspan="1">Shape</th>
|
||
<th colspan="1" pageId="0" pageNumber="187" rowspan="1">Size (μm)</th>
|
||
<th colspan="1" pageId="0" pageNumber="187" rowspan="1">Septa</th>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<taxonomicName lsidName="A. atrocariis" pageId="0" pageNumber="187" rank="species" species="atrocariis">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. atrocariis</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Ovoid, ellipsoid</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
50-100
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
25-38
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">3-12</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">1-2</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Hosta</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">
|
||
<taxonomicName lsidName="A. divaricatae" pageId="0" pageNumber="187" rank="species" species="divaricatae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. divaricatae</emphasis>
|
||
</taxonomicName>
|
||
sp. nov.
|
||
</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">Short-ovoid,subglobose, ellipsoid</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">
|
||
21-38
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
12-26
|
||
</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">1-4</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">1</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">PCA d</emphasis>
|
||
</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">
|
||
22-39
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
13-24
|
||
</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">1-4</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">V8A d</emphasis>
|
||
</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<taxonomicName lsidName="A. carotiincultae" pageId="0" pageNumber="187" rank="species" species="carotiincultae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. carotiincultae</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Long ovoid or ellipsoid</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
40-80
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
15-23
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">5-7 (-11)</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">1-3</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">PCA a</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<taxonomicName lsidName="A. chlamydosporifera" pageId="0" pageNumber="187" rank="species" species="chlamydosporifera">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. chlamydosporifera</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">ellipsoidal or ovoid, occasionally, subglobose</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
12-41
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
7-20
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">1-3(-4)</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">1, occasionally 2</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">PCA b</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<taxonomicName lsidName="A. glehniae" pageId="0" pageNumber="187" rank="species" species="glehniae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. glehniae</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Long ovoid, ellipsoid</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
20-40 (-48)
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
10-20
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">3-7</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">1, occasionally 2</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">PCA c</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<taxonomicName lsidName="A. petroselini" pageId="0" pageNumber="187" rank="species" species="petroselini">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. petroselini</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Short-ovoid to subsphaeroid</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
35-62(-66)
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
20-26
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">6-8</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">1, rarely to 2</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">PCA a</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<taxonomicName lsidName="A. radicina" pageId="0" pageNumber="187" rank="species" species="radicina">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. radicina</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Short-broad or long-narrow ellipsoid and ovoid</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
42-63
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
15-20
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">4-8</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">1, seldom up to 2</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">PCA a</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">
|
||
<taxonomicName lsidName="A. selini" pageId="0" pageNumber="187" rank="species" species="selini">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. selini</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Short-ovoid</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
32-42(-50)
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
22-27
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">3-5</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">1-3</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">PCA a</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Long-ellipsoid</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
48-65(-50)
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
15-20
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Up to 7</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">
|
||
<taxonomicName lsidName="A. smyrnii" pageId="0" pageNumber="187" rank="species" species="smyrnii">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. smyrnii</emphasis>
|
||
</taxonomicName>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Ovoid, obovoid</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
40-58
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
18-22
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">7-8(-10)</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">1-2</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">PCA a</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">Narrower ellipsoid</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
67-96
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
13-16
|
||
</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">
|
||
<taxonomicName lsidName="A. vulgarae" pageId="0" pageNumber="187" rank="species" species="vulgarae">
|
||
<emphasis italics="true" pageId="0" pageNumber="187">A. vulgarae</emphasis>
|
||
</taxonomicName>
|
||
sp. nov.
|
||
</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">Short-ovoid, ovoid or long-ellipsoid</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">
|
||
25-50 (-70)
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
16-27
|
||
</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">1-5</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="2">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">1</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">PCA d</emphasis>
|
||
</td>
|
||
</tr>
|
||
<tr pageId="0" pageNumber="187">
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">
|
||
24-55 (-77)
|
||
<normalizedToken originalValue="×">x</normalizedToken>
|
||
13-26
|
||
</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">1-8</emphasis>
|
||
</td>
|
||
<td colspan="1" pageId="0" pageNumber="187" rowspan="1">
|
||
<emphasis bold="true" pageId="0" pageNumber="187">V8A d</emphasis>
|
||
</td>
|
||
</tr>
|
||
</table>
|
||
</paragraph>
|
||
<paragraph pageId="0" pageNumber="187">
|
||
<tableNote pageId="0" pageNumber="187">
|
||
a referenced from
|
||
<bibRefCitation author="Simmons, EG" journalOrPublisher="Mycotaxon" pageId="0" pageNumber="187" refId="B30" refString="Simmons, EG, 2007. Alternaria: An identification manual, CBS Biodiversity Series 6. Centraalbureau voor Schimmelcultures, Utrecht." title="Alternaria: An identification manual, CBS Biodiversity Series 6. Centraalbureau voor Schimmelcultures, Utrecht." year="2007">Simmons (2007)</bibRefCitation>
|
||
; b referenced from
|
||
<bibRefCitation DOI="https://doi.org/10.1016/j.simyco.2019.05.001" author="Marin-Felix, Y" journalOrPublisher="Studies in Mycology" pageId="0" pageNumber="187" pagination="1 - 124" refId="B20" refString="Marin-Felix, Y, Hernandez-Restrepo, M, Iturrieta-Gonzalez, I, Garcia, D, Gene, J, Groenewald, JZ, Cai, L, Chen, Q, Quaedvlieg, W, Schumacher, RK, Taylor, PWJ, Ambers, C, Bonthond, G, Edwards, J, Krueger-Hadfield, SA, Luangsa-ard, JJ, Morton, L, Moslemi, A, Sandoval-Denis, M, Tan, YP, Thangavel, R, Vaghefi, N, Cheewangkoon, R, Crous, PW, 2019. Genera of phytopathogenic fungi: GOPHY 3. Studies in Mycology 94: 1 - 124, DOI: https://doi.org/10.1016/j.simyco.2019.05.001" title="Genera of phytopathogenic fungi: GOPHY 3." url="https://doi.org/10.1016/j.simyco.2019.05.001" volume="94" year="2019">Marin-Felix et al. (2019)</bibRefCitation>
|
||
; c referenced from
|
||
<bibRefCitation DOI="https://doi.org/10.11646/phytotaxa.397.2.4" author="Tao, YQ" journalOrPublisher="Phytotaxa" pageId="0" pageNumber="187" pagination="169 - 176" refId="B33" refString="Tao, YQ, Jia, GG, Aung, SLL, Wu, QL, Lu, HX, Deng, JX, 2019. Multigene phylogeny and morphology of Alternaria reveal a novel species and a new record in china. Phytotaxa 397 (2): 169 - 176, DOI: https://doi.org/10.11646/phytotaxa.397.2.4" title="Multigene phylogeny and morphology of Alternaria reveal a novel species and a new record in china." url="https://doi.org/10.11646/phytotaxa.397.2.4" volume="397" year="2019">Tao et al. (2019)</bibRefCitation>
|
||
; d determined in the present study.
|
||
</tableNote>
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |