137 lines
11 KiB
XML
137 lines
11 KiB
XML
<document id="370DFAC999B000566E585DD631133D7F" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="21ACC375A4D85CC7BA4A8CED06A36780" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Lokrumales Tedersoo 2024, ord. nov." docType="treatment" docVersion="1" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723223268898" updateUser="pensoft">
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<mods:titleInfo id="94B312CC84BD61ED2ADC3BF0FE8D28DF">
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<mods:title id="BBAC7E285AC0708E5153F0B6648029B5">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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</mods:titleInfo>
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<mods:name id="D53EB5C53668F3D884D4AA9FB0CEBFE8" type="personal">
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<mods:role id="CD4506BC793EF65FB4FA96D033FE2E9E">
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<mods:roleTerm id="F77955B2D0F2E4150A24EC662335EEF3">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="C67F050BF1829BEBA69D86349414B74F">Tedersoo, Leho</mods:namePart>
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<mods:affiliation id="A37E6D68969485A978798C8BB0F3A51D">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="83F45F06741B01E7B9653CBFE63D1AEA" type="personal">
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<mods:role id="3487A2CED9D5A44466F320695903632D">
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<mods:roleTerm id="910FBA271025CA3D1305927E2E072E39">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="0B092CDDE04D4B4CE96244CA07CD901E">Magurno, Franco</mods:namePart>
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<mods:nameIdentifier id="F1388CB14D293126ACA89468A9793971" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
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<mods:affiliation id="E427F6603CD5A147BA14E03DDB884450">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
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</mods:name>
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<mods:name id="C4CB4036B6EB6326D8E3C09B86A7150C" type="personal">
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<mods:roleTerm id="66EF3E5D403590F57BCA0D216B7E7ECF">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="BC2977FD8F5D7726C0D780D0C0B3E46B">Alkahtani, Saad</mods:namePart>
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<mods:nameIdentifier id="E13800F3218A0241A20C6230C4BFF7F2" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
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<mods:affiliation id="E65E485E05BDF40E4462536C88A1AD94">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="D21D7E3518D8A85B642D70F91136BD6E" type="personal">
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</mods:role>
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<mods:namePart id="47D691E7E20F42D0DE4A36AD8662C91E">Mikryukov, Vladimir</mods:namePart>
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<mods:nameIdentifier id="2CC407C268DCDFAF690785AA69B61CD2" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
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<mods:affiliation id="59E2BBC439C06B0EBC8581606B5BAE3D">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="21CBFD5B06EA9E3581E36B1A211D180B">text</mods:typeOfResource>
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<mods:titleInfo id="E4BCEEBB3BA820B60DDC0E866E4759D3">
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<mods:title id="F6D2D0674774A3C1AF3BFD4A49358211">MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part id="9E9D0C697A9482E465777FD40B380F3F">
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<mods:date id="926D5890297B8857793A7762B5A6F037">2024</mods:date>
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<mods:detail id="B79416D8C6AB2FCAD5F5AF6F4F704FE1" type="pubDate">
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<mods:number id="CFCC87293ABA4868559EAF2F16025F1D">2024-08-09</mods:number>
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</mods:detail>
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<mods:detail id="0D2A0C90A4BD0FB3851448B02C87A90D" type="volume">
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<mods:number id="AC05BB33E2EBD7C55C0EDDF3FE274C77">107</mods:number>
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</mods:detail>
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<mods:extent id="8365FCA496C23DF708E130C5CF014B48" unit="page">
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<mods:start id="35D57859D2FCF0F3FD85B63DE6EB7F7B">249</mods:start>
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<mods:end id="4DB39662451307A7E0A6D31B5851AAD8">271</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification id="1958E2A9772DF4AFE2A81A75A49D8565">journal article</mods:classification>
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<mods:identifier id="8CAD4F50BAA634223BE7A4596718A473" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
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</mods:mods>
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<treatment id="21ACC375A4D85CC7BA4A8CED06A36780" ID-arpha="21ACC375-A4D8-5CC7-BA4A-8CED06A36780" ID-mycobank="853594" LSID="urn:lsid:plazi:treatment:21ACC375A4D85CC7BA4A8CED06A36780" httpUri="http://treatment.plazi.org/id/21ACC375A4D85CC7BA4A8CED06A36780">
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<subSubSection id="C33E5EC1E2FCEA8DE99EA1DCEBB57AFA" type="nomenclature">
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<paragraph id="97DE762C612A66EAD0CC214A6B88B281">
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<taxonomicName id="C40C9D1E1ECABA1DA3D7B4B94620535F" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" kingdom="Fungi" order="Lokrumales" rank="order" status="ord. nov.">Lokrumales Tedersoo</taxonomicName>
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<taxonomicNameLabel id="06F7836BCAA5DD36F4CF6FAD68D6665B" rank="order">ord. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EBLDI" type="Type family">
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<paragraph id="2A6CC34D0D216474B2F2A260F5BEDBE8">
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<heading id="543987DAB57C9AFF176F266AC008F638" reason="title">
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<typeStatus id="79FDAD900842884E85B204692A8EDF0A">Type</typeStatus>
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family.
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</heading>
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</paragraph>
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<paragraph id="5AE3F8EF92AC615714DEE855B60DBB79">
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<taxonomicName id="39F8A3DFADF7DE85D8ED888EB9E9B4B5" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" family="Lokrumaceae" rank="family" status="fam. nov.">Lokrumaceae Tedersoo</taxonomicName>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EMLDI" type="description">
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<paragraph id="9AD4A51C3F6E56EB86B5953966AC9E4A">
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<heading id="5DC33C46E9EE5A0B3256611ED35F98F8" reason="title">Description.</heading>
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</paragraph>
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<paragraph id="2A2F5822A0FF1C873D8B86560CE5E7BC">
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Covers the monophyletic group in
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<taxonomicName id="A62B03EB2A6211E1AEA52A99D5C6E250" class="Endogonomycetes" higherTaxonomySource="CoL,GBIF" kingdom="Fungi" phylum="Mucoromycota" rank="class">Endogonomycetes</taxonomicName>
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(Fig.
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<figureCitation id="81CC634AAE42CFC4221E689B04C28FF4" captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogenetic position of genera and genus-level groups of Endogonomycetes based on Maximum Likelihood analysis of SSU- 5.8 S-LSU sequences. The clades are collapsed, with the number of sequences included in parentheses. Question marks above branches indicate low ultra-rapid bootstrap support (< 95). Orders are highlighted in different colours. The uncollapsed phylogram is given in Suppl. material 3." figureDoi="10.3897/mycokeys.107.125549.figure2" httpUri="https://binary.pensoft.net/fig/1111389">2</figureCitation>
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). Phylogenetically delimited as the least inclusive clade covering sequence accessions EUK 1203766, EUK 1600125 and EUK 1600268 (Suppl. material
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<xref id="E571049ECE4394C5C96238E1720ED0EA" ref-type="supplementary-material" rid="S3">3</xref>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EAMDI" type="notes">
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<paragraph id="BDFE681326CB1C84037FAB7BC37A222A">
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<heading id="6990A0552A7445C143C0243707CFBEB4" reason="title">Notes.</heading>
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</paragraph>
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<paragraph id="ED6A8C85A4DBF1C697863737F05B14E1">
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Recognised based on
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<abbrev id="ABBRID0EGMDI" xlink_title="environmental DNA">eDNA</abbrev>
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sequences only. Currently includes Lokrumaceae and another potentially family-level taxon, represented by sequences EUK 1602809 (
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<abbrev id="ABBRID0EPMDI" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="0F5A3C92B8C697044E9BCE6665DC55C4" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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4499, rich, calcareous
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<taxonomicName id="C95249A362E8ECD978395D9DA5225430" class="Pinopsida" family="Pinaceae" genus="Picea" kingdom="Plantae" order="Pinales" phylum="Tracheophyta" rank="species" species="abies">
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<emphasis id="8BEABDC8FDEC62A37D6AD35B4788554F" italics="true">Picea abies</emphasis>
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</taxonomicName>
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forest soil in Kurisoo,
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<collectingCountry id="3D4725E3402FD3F77936A621DFA9A52A" name="Estonia">Estonia</collectingCountry>
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;
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EBNDI" specific-use="{"type":"Point","coordinates":[25.763950,59.128080]}">
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<geoCoordinate id="B3080664B692A6F2C7AFEF80E43C287B" degrees="59.12808" direction="north" orientation="latitude" precision="1" value="59.12808">59.12808 ° N</geoCoordinate>
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,
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<geoCoordinate id="119B17A67121A4396C294169A4575E15" degrees="25.76395" direction="east" orientation="longitude" precision="1" value="25.76395">25.76395 ° E</geoCoordinate>
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</named-content>
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); EUK 1603041 and EUK 1603145 (both
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<abbrev id="ABBRID0EGNDI" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="723BF51BED98B2469335F1631F657DBC" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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4185,
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<emphasis id="ED09A207BC0FFAF1A4C8E459E635F9F9" italics="true">
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<taxonomicName id="58092059F21D0B73D9355A6B99FD14A3" class="Pinopsida" family="Pinaceae" genus="Picea" kingdom="Plantae" order="Pinales" phylum="Tracheophyta" rank="genus">Picea</taxonomicName>
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-
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<taxonomicName id="3E534B83851F2443DEDE954754DB210E" authorityName="Perry" authorityYear="1811" class="Pinopsida" family="Pinaceae" genus="Pinus" kingdom="Plantae" order="Pinales" phylum="Tracheophyta" rank="genus">Pinus</taxonomicName>
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</emphasis>
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forest soil in Ristipalo,
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<collectingCountry id="AB7D1B990CE7C368A47CBE6642E59B40" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EUNDI" specific-use="{"type":"Point","coordinates":[27.478740,58.102410]}">
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<geoCoordinate id="9D06D37296EC1317AE87840610EEDF7F" degrees="58.10241" direction="north" orientation="latitude" precision="1" value="58.10241">58.10241 ° N</geoCoordinate>
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,
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<geoCoordinate id="5A32A1874596C2F0307C90D01F3F4D90" degrees="27.47874" direction="east" orientation="longitude" precision="1" value="27.47874">27.47874 ° E</geoCoordinate>
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</named-content>
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).
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |