132 lines
15 KiB
XML
132 lines
15 KiB
XML
<document id="40818D44AF82370ABE5FEC5A0C1A3103" ID-DOI="10.1016/j.phytochem.2021.112881" ID-GBIF-Dataset="2ea59e53-b059-41a5-b5b5-30cb32d3aaf0" ID-ISSN="1873-3700" ID-Zenodo-Dep="8270251" IM.bibliography_approvedBy="juliana" IM.illustrations_approvedBy="juliana" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="juliana" IM.tables_approvedBy="juliana" IM.taxonomicNames_approvedBy="juliana" IM.treatments_approvedBy="juliana" checkinTime="1692304096437" checkinUser="felipe" docAuthor="Hýskova, Veronika, Belonozníkov, Katerina, Smeringaiova, Ingrida, Kavan, Daniel, Ingr, Marek & Ryslava, Helena" docDate="2021" docId="0139879D1C4AFFC6FFC9F929708A9703" docLanguage="en" docName="Phytochemistry.190.112881.pdf" docOrigin="Phytochemistry (112881) 190" docSource="http://dx.doi.org/10.1016/j.phytochem.2021.112881" docStyle="DocumentStyle:F36D69FC8B198FBE91029DF9C24697D3.5:Phytochemistry.2020-.journal_article" docStyleId="F36D69FC8B198FBE91029DF9C24697D3" docStyleName="Phytochemistry.2020-.journal_article" docStyleVersion="5" docTitle="Petroselinum crispum subsp. root SDH" docType="treatment" docVersion="6" lastPageNumber="6" masterDocId="FD00FFE51C4FFFC3FFADFFE27321920C" masterDocTitle="How is the activity of shikimate dehydrogenase from the root of Petroselinum crispum (parsley) regulated and which side reactions are catalyzed?" masterLastPageNumber="12" masterPageNumber="1" pageNumber="6" updateTime="1692634466674" updateUser="ExternalLinkService">
|
||
<mods:mods id="D7DF6F335A4882F81099C29CEAAE296A" xmlns:mods="http://www.loc.gov/mods/v3">
|
||
<mods:titleInfo id="471E9374756B2A3C4AD5969E2CFA857A">
|
||
<mods:title id="F9C1B50E9FE4500F12EC0FE4F90DCBA1">How is the activity of shikimate dehydrogenase from the root of Petroselinum crispum (parsley) regulated and which side reactions are catalyzed?</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:name id="69DC48CF40A6652D77545C7BCB2BBDE8" type="personal">
|
||
<mods:role id="DFA2CFB27FA317626F4F8EAEA3BDDAE4">
|
||
<mods:roleTerm id="085DB86E6AAA3DB8CC93691D3C1FCD46">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="88F5256A129FA08693ADB91914D20501">Hýskova, Veronika</mods:namePart>
|
||
<mods:affiliation id="447C8BACBBCE4E1148C8B26F220E5A35">Department of Biochemistry, Faculty of Science, Charles University, Hlavova 2030, Prague 2, 128 40, Czech Republic</mods:affiliation>
|
||
</mods:name>
|
||
<mods:name id="EB796682125CE5911E913B14D5CCA771" type="personal">
|
||
<mods:role id="8CD52AF4B220E3AB1D5FB85648A2BDE8">
|
||
<mods:roleTerm id="4DA93D4F375484CF48E2BA774D1FF3AE">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="2159EA437BEF42FC82F2D6EA4B88D125">Belonozníkov, Katerina</mods:namePart>
|
||
<mods:affiliation id="57AD4C6D9BAC4DD16A561C91DE10101B">Department of Biochemistry, Faculty of Science, Charles University, Hlavova 2030, Prague 2, 128 40, Czech Republic</mods:affiliation>
|
||
</mods:name>
|
||
<mods:name id="1ADE9656D6EC9D0EBC83D0A147EE3455" type="personal">
|
||
<mods:role id="83CB7026731066C5D1B98E2E0C02827D">
|
||
<mods:roleTerm id="BEB9F79D44F6D3EFA300756719D5FFAA">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="D768781CA8A9C72F69E8D30C4224710C">Smeringaiova, Ingrida</mods:namePart>
|
||
<mods:affiliation id="27591FCB47856AE652078BB3E6570859">Department of Biochemistry, Faculty of Science, Charles University, Hlavova 2030, Prague 2, 128 40, Czech Republic</mods:affiliation>
|
||
</mods:name>
|
||
<mods:name id="0D81CE19344304ECE49EA1CA20808718" type="personal">
|
||
<mods:role id="8AE4973092C43F89CEEA608CF3C927E6">
|
||
<mods:roleTerm id="9BADBF1C378CB08F63F811416F728A41">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="A8DFBEB8693CE8A0C305A38210BF328A">Kavan, Daniel</mods:namePart>
|
||
<mods:affiliation id="3AA35B9B347FBE0FDBCB5C5E1A7EED40">Department of Biochemistry, Faculty of Science, Charles University, Hlavova 2030, Prague 2, 128 40, Czech Republic</mods:affiliation>
|
||
</mods:name>
|
||
<mods:name id="27D2FBA69138D7DDA243739A0AFA89A4" type="personal">
|
||
<mods:role id="DB4423ECEDEFB6C9A3AE8164D38FED49">
|
||
<mods:roleTerm id="EBF681FF94BC9B6BD6FCC232F7347746">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="3127F5F5C338B1D9F2DA81AB3F9A0701">Ingr, Marek</mods:namePart>
|
||
<mods:affiliation id="AFE2D2AA3D2CDC4CCC0870D34AD7BFD3">Department of Biochemistry, Faculty of Science, Charles University, Hlavova 2030, Prague 2, 128 40, Czech Republic & Tomas Bata University in Zlín, Faculty of Technology, Department of Physics and Materials Engineering, N´am. T. G. Masaryka 5555, 760 01, Zlín, Czech Republic & Tomas Bata University in Zlín, Faculty of Technology, Department of Physics and Materials Engineering, N´am. T. G. Masaryka 5555, 760 01, Zlín, Czech Republic</mods:affiliation>
|
||
</mods:name>
|
||
<mods:name id="3BADF10298114FC23EBB46CFCDA0CFFF" type="personal">
|
||
<mods:role id="684242467B8FF691EE20CEFF089216AD">
|
||
<mods:roleTerm id="769544D29988366FB558724F991881EF">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="3B8A1DAF2E794860FD7A5CE880D46300">Ryslava, Helena</mods:namePart>
|
||
<mods:affiliation id="9B1620DA711ACA864C6D9CACF8BBC43E">Department of Biochemistry, Faculty of Science, Charles University, Hlavova 2030, Prague 2, 128 40, Czech Republic</mods:affiliation>
|
||
</mods:name>
|
||
<mods:typeOfResource id="16B74140769C94D348AFF828672B0197">text</mods:typeOfResource>
|
||
<mods:relatedItem id="1A7C38C0B6F4230B1E57C8EB9AB98160" type="host">
|
||
<mods:titleInfo id="280837BD8AF817A5A9E7D75F3D8670D0">
|
||
<mods:title id="BB4992FEB45974620DBD119D4F48D4A4">Phytochemistry</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:part id="C8C935FB3DAF26BE5F3FF9D556601394">
|
||
<mods:date id="01DD96C6C7276F95E8FFD44DE2A55DA4">2021</mods:date>
|
||
<mods:detail id="9F148837A2847E851781F000EEC6F879" type="series">
|
||
<mods:title id="4D9F8E10F78752FE8666E068A7678643">112881</mods:title>
|
||
</mods:detail>
|
||
<mods:detail id="00A2462587F4960ECC122207214AD1E1" type="pubDate">
|
||
<mods:number id="D3A610E390BAA93B92206E9C92498841">2021-10-31</mods:number>
|
||
</mods:detail>
|
||
<mods:detail id="DF9562ABB3FD981E4130F93BB2D58C3E" type="volume">
|
||
<mods:number id="DFF20ED1CE0DF37806F3E5A1084B3F63">190</mods:number>
|
||
</mods:detail>
|
||
<mods:extent id="CA506C5A157FDDFD456A917CFA5B2F63" unit="page">
|
||
<mods:start id="061C6BA1ECF3BC0F8AC5B182C03B152D">1</mods:start>
|
||
<mods:end id="C74D93945B4909200963D798647BF7E7">12</mods:end>
|
||
</mods:extent>
|
||
</mods:part>
|
||
</mods:relatedItem>
|
||
<mods:location id="2A9164333540CE7C27D4B25258A39336">
|
||
<mods:url id="15F9CB6BA1C918A628D7399C53FAD5A3">http://dx.doi.org/10.1016/j.phytochem.2021.112881</mods:url>
|
||
</mods:location>
|
||
<mods:classification id="8D513097C88991A01BC50756831A6907">journal article</mods:classification>
|
||
<mods:identifier id="1D931A2D285717A83DE14E1B602BBC3D" type="DOI">10.1016/j.phytochem.2021.112881</mods:identifier>
|
||
<mods:identifier id="3F2F985949A8C15FB56C3BA6E5F9F296" type="GBIF-Dataset">2ea59e53-b059-41a5-b5b5-30cb32d3aaf0</mods:identifier>
|
||
<mods:identifier id="130F6EAB3F35415C178B1765322F72C9" type="ISSN">1873-3700</mods:identifier>
|
||
<mods:identifier id="AA966DFBAD6404907A58194115738C51" type="Zenodo-Dep">8270251</mods:identifier>
|
||
</mods:mods>
|
||
<treatment id="0139879D1C4AFFC6FFC9F929708A9703" ID-DOI="http://doi.org/10.5281/zenodo.8264314" ID-GBIF-Taxon="212439142" ID-Zenodo-Dep="8264314" LSID="urn:lsid:plazi:treatment:0139879D1C4AFFC6FFC9F929708A9703" httpUri="http://treatment.plazi.org/id/0139879D1C4AFFC6FFC9F929708A9703" lastPageNumber="6" pageId="5" pageNumber="6">
|
||
<subSubSection id="C18A65001C4AFFC6FFC9F929716394D2" box="[100,578,1739,1759]" pageId="5" pageNumber="6" type="nomenclature">
|
||
<paragraph id="892F368B1C4AFFC6FFC9F929716394D2" blockId="5.[100,578,1739,1759]" box="[100,578,1739,1759]" pageId="5" pageNumber="6">
|
||
<heading id="D26781E71C4AFFC6FFC9F929716394D2" bold="true" box="[100,578,1739,1759]" fontSize="36" level="1" pageId="5" pageNumber="6" reason="1">
|
||
<emphasis id="BBE4EA991C4AFFC6FFC9F929716394D2" bold="true" box="[100,578,1739,1759]" italics="true" pageId="5" pageNumber="6">
|
||
3.1.
|
||
<taxonomicName id="4E904D081C4AFFC6FF38F92E73D294D2" ID-CoL="6V8D2" ID-ENA="4043" authority="SDH" authorityName="SDH" baseAuthorityName="Mill." box="[149,243,1739,1759]" class="Magnoliopsida" family="Apiaceae" genus="Petroselinum" kingdom="Plantae" order="Apiales" pageId="5" pageNumber="6" phylum="Tracheophyta" rank="species" species="crispum">P. crispum</taxonomicName>
|
||
root extracts show high SDH activity
|
||
</emphasis>
|
||
</heading>
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C18A65001C4AFFC6FF29F8E1708A9703" pageId="5" pageNumber="6" type="description">
|
||
<paragraph id="892F368B1C4AFFC6FF29F8E1708A9703" blockId="5.[100,770,1795,1982]" lastBlockId="5.[818,1488,1080,1295]" pageId="5" pageNumber="6">
|
||
One of the reasons why SDH activity is low in plant crude extracts is the presence of phenolics. In general, when exposed to air, plant phenolics are readily oxidized, generating products that form complexes with proteins and inhibit enzyme activity (
|
||
<bibRefCitation id="ED014B7A1C4AFFC6FDA9F8B571F99566" author="Buchanan, B. B. & Gruissem, W. & Jones, R. L." box="[516,728,1879,1898]" pageId="5" pageNumber="6" refId="ref10228" refString="Buchanan, B. B., Gruissem, W., Jones, R. L., 2000. Biochemistry & Molecular Biology of Plants. American Society of Plant Physiologists, Rockville, Maryland." type="book" year="2000">Buchanan et al., 2000</bibRefCitation>
|
||
), as shown in
|
||
<figureCitation id="11AB2A0E1C4AFFC6FF10F8917224958A" box="[189,261,1907,1926]" captionStart="Fig" captionStartId="2.[100,130,1042,1059]" captionTargetBox="[264,1323,149,1014]" captionTargetId="figure-308@2.[263,1324,148,1015]" captionTargetPageId="2" captionText="Fig. 1. Determination of the type of SDH reaction mechanism based on Lineweaver-Burk diagnostical plots for the direction from SA to DHS (A,B) and from DHS to SA (C,D) Double reciprocal plots are fitted to an equation corresponding to a sequential mechanism." figureDoi="http://doi.org/10.5281/zenodo.8270255" httpUri="https://zenodo.org/record/8270255/files/figure.png" pageId="5" pageNumber="6">Fig. A.1</figureCitation>
|
||
. Since the total phenolic content is very high in plants, especially in medicinal herbs (
|
||
<bibRefCitation id="ED014B7A1C4AFFC6FE2DF86D710995AE" author="Tupec, M. & Hyskova, V. & Belonoznikova, K. & Hranicek, J. & Cerveny, V. & Ryslava, H." box="[384,552,1935,1954]" pageId="5" pageNumber="6" pagination="43 - 50" refId="ref13330" refString="Tupec, M., Hyskova, V., Belonoznikova, K., Hranicek, J., Cerveny, V., Ryslava, H., 2017. Characterization of some potential medicinal plants from Central Europe by their antioxidant capacity and the presence of metal elements. Food Biosci 20, 43 - 50. https: // doi. org / 10.1016 / j. fbio. 2017.08.001." type="journal article" year="2017">Tupec et al., 2017</bibRefCitation>
|
||
), a group of vegetables was chosen to identify a source of high SDH activity from non-photosynthetic tissue. From the group of 8 vegetable sources, the
|
||
<taxonomicName id="4E904D081C4AFFC6FC9FFBB770B1966B" box="[818,912,1108,1128]" class="Magnoliopsida" family="Apiaceae" genus="Petroselinum" kingdom="Plantae" order="Apiales" pageId="5" pageNumber="8" phylum="Tracheophyta" rank="species" species="crispum">
|
||
<emphasis id="BBE4EA991C4AFFC6FC9FFBB770B1966B" bold="true" box="[818,912,1108,1128]" italics="true" pageId="5" pageNumber="6">P. crispum</emphasis>
|
||
</taxonomicName>
|
||
root exhibited the highest SDH activity. After 3-step purification procedure specific SDH activity in
|
||
<emphasis id="BBE4EA991C4AFFC6FB1CFB9376129688" bold="true" box="[1201,1331,1136,1156]" italics="true" pageId="5" pageNumber="6">
|
||
<taxonomicName id="4E904D081C4AFFC6FB1CFB93762D968F" box="[1201,1292,1136,1156]" class="Magnoliopsida" family="Apiaceae" genus="Petroselinum" kingdom="Plantae" order="Apiales" pageId="5" pageNumber="6" phylum="Tracheophyta" rank="species" species="crispum">P. crispum</taxonomicName>
|
||
was
|
||
</emphasis>
|
||
470 nmol.
|
||
<superScript id="7EE59BC31C4AFFC6FA38FB9276EB9675" attach="left" box="[1429,1482,1131,1155]" fontSize="6" pageId="5" pageNumber="6">min-1</superScript>
|
||
. mg
|
||
<superScript id="7EE59BC31C4AFFC6FCE2FB64707C9698" attach="left" box="[847,861,1158,1172]" fontSize="6" pageId="5" pageNumber="6">-1</superScript>
|
||
. This activity was lower than SDH from recombinant sources e.g. (
|
||
<bibRefCitation id="ED014B7A1C4AFFC6FC97FB4A70CF96B7" author="Tahara, K. & Nishiguchi, M. & Funke, E. & Miyazawa, S. - I. & Miyama, T. & Milkowski, C." box="[826,1006,1192,1211]" pageId="5" pageNumber="6" refId="ref13138" refString="Tahara, K., Nishiguchi, M., Funke, E., Miyazawa, S. - I., Miyama, T., Milkowski, C., 2021. Dehydroquinate dehydratase / shikimate dehydrogenases involved in gallate biosynthesis of the aluminum-tolerant tree species Eucalyptus camaldulensis. Planta 253. https: // doi. org / 10.1007 / s 00425 - 020 - 03516 - w." type="journal volume" year="2021">Tahara et al., 2021</bibRefCitation>
|
||
) but comparable with SDH from etiolated pea epicotyls (
|
||
<bibRefCitation id="ED014B7A1C4AFFC6FCDBFB26774C96DB" author="Balinsky, D. & Davies, D. D." box="[886,1133,1220,1239]" pageId="5" pageNumber="6" pagination="292 - 296" refId="ref9863" refString="Balinsky, D., Davies, D. D., 1961. Aromatic biosynthesis in higher plants. 1. Preparation and properties of dehydroshikimic reductase. Biochem. J. 80, 292 - 296. https: // doi. org / 10.1042 / bj 0800292." type="journal article" year="1961">Balinsky and Davies, 1961</bibRefCitation>
|
||
), or tomato (
|
||
<taxonomicName id="4E904D081C4AFFC6FB46FB26769196DB" box="[1259,1456,1220,1239]" class="Magnoliopsida" family="Solanaceae" genus="Solanum" kingdom="Plantae" order="Solanales" pageId="5" pageNumber="6" phylum="Tracheophyta" rank="species" species="lycopersicum">
|
||
<emphasis id="BBE4EA991C4AFFC6FB46FB26769196DB" bold="true" box="[1259,1456,1220,1239]" italics="true" pageId="5" pageNumber="6">Solanum lycopersicum</emphasis>
|
||
</taxonomicName>
|
||
L.) fruit (
|
||
<bibRefCitation id="ED014B7A1C4AFFC6FCC5FB02774996FF" author="Lourenco, E. J. & Neves, V. A." box="[872,1128,1248,1267]" pageId="5" pageNumber="6" pagination="497 - 499" refId="ref12350" refString="Lourenco, E. J., Neves, V. A., 1984. Partial purification and some properties of shikimate dehydrogenase from tomatoes. Phytochemistry 23, 497 - 499. https: // doi. org / 10.1016 / S 0031 - 9422 (00) 80366 - 0." type="journal article" year="1984">Lourenco and Neves, 1984</bibRefCitation>
|
||
) or
|
||
<taxonomicName id="4E904D081C4AFFC6FB3CFB02763E96FF" box="[1169,1311,1248,1267]" class="Magnoliopsida" family="Cucurbitaceae" genus="Cucumis" kingdom="Plantae" order="Cucurbitales" pageId="5" pageNumber="6" phylum="Tracheophyta" rank="species" species="sativus">
|
||
<emphasis id="BBE4EA991C4AFFC6FB3CFB02763E96FF" bold="true" box="[1169,1311,1248,1267]" italics="true" pageId="5" pageNumber="6">Cucumis sativus</emphasis>
|
||
</taxonomicName>
|
||
L. pulp (
|
||
<bibRefCitation id="ED014B7A1C4AFFC6FAD5FB0270BC9703" author="Lourenco, E. J. & Silva, G. M. & Neves, V. A." pageId="5" pageNumber="6" pagination="458 - 462" refId="ref12404" refString="Lourenco, E. J., Silva, G. M., Neves, V. A., 1991. Purification and properties of shikimate dehydrogenase from cucumber (Cucumis sativus L.). J. Agric. Food Chem. 39, 458 - 462. https: // doi. org / 10.1021 / jf 00003 a 006." type="journal article" year="1991">Lourenco et al., 1991</bibRefCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |