247 lines
22 KiB
XML
247 lines
22 KiB
XML
<document id="166B14AEFA9CC9E8A3567E2277E4A6B6" ID-CLB-Dataset="276805" ID-DOI="10.1099/ijsem.0.002797" ID-GBIF-Dataset="61eed1af-f1ce-41f5-9729-eb4a3ed945e9" ID-ISSN="1466-5034" ID-Zenodo-Dep="6223793" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1645465699765" checkinUser="felipe" docAuthor="Sung, Hojun, Kim, Hyun Sik, Lee, June-Young, Kang, Woorim, Kim, Pil Soo, Hyun, Dong-Wook, Tak, Euon Jung, Jung, Mi-Ja, Yun, Ji-Hyun, Kim, Min-Soo, Shin, Na-Ri, Whon, Tae Woong, Rho, Jeong Rae, Park, Sun Duk, Shim, Hyung Eun & Bae, Jin-Woo" docDate="2018" docId="CC7887A0FF95FF845313979643D5A86B" docLanguage="en" docName="IntJSystEvolMicrobiol.68.6.2068-2073.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 68 (6)" docSource="http://dx.doi.org/10.1099/ijsem.0.002797" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Oceanisphaera avium Sung & Kim & Lee & Kang & Kim & Hyun & Tak & Jung & Yun & Kim & Shin & Whon & Rho & Park & Shim & Bae 2018, SP. NOV." docType="treatment" docVersion="7" lastPageNumber="2072" masterDocId="3041FFD8FF96FF80502892184679AE49" masterDocTitle="Oceanisphaera avium sp. nov., isolated from the gut of the cinereous vulture, Aegypius monachus" masterLastPageNumber="2073" masterPageNumber="2068" pageNumber="2071" updateTime="1702002300886" updateUser="plazi">
|
||
<mods:mods id="F0C6A5ECFE775D1434CF7C8DE7CB7DA0" xmlns:mods="http://www.loc.gov/mods/v3">
|
||
<mods:titleInfo id="8A8FEE29D91501D229DB5CC26421D5AC">
|
||
<mods:title id="17001059C87F0A76C3F93FC7613DA25D">Oceanisphaera avium sp. nov., isolated from the gut of the cinereous vulture, Aegypius monachus</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:name id="55021E444F011C2748EA0B0253A36F60" type="personal">
|
||
<mods:role id="6E6495AC828FFA76ACDC04B47BA41741">
|
||
<mods:roleTerm id="E5DCAD42EC341E2F550100484E45B656">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="6D7A418788CA6FE26E037BC8974AF87A">Sung, Hojun</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="3C9346169B814CE8A2D7280943915280" type="personal">
|
||
<mods:role id="A157FC05CA0853F139D3355CBE2C327F">
|
||
<mods:roleTerm id="1796D2506964543FBF2C66E1EDE0B451">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="2360C184F9B1213A6D1C5EC12BF2F1F6">Kim, Hyun Sik</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="8B86280F8E66F9F5736ACDEB007299AF" type="personal">
|
||
<mods:role id="552EA8F947DEAAC6190B32200B630DF8">
|
||
<mods:roleTerm id="0EFA52ED12318D22741A955F4577F5CA">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="8F7961C394A710441D625212AE41CDB8">Lee, June-Young</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="47DC41009C558362D62B376F9109BCD7" type="personal">
|
||
<mods:role id="B125120553A1706D90118A07C4A9AA8F">
|
||
<mods:roleTerm id="2758DCCF47C8F4A4A811446FAE2354B0">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="BB55BE88949A2A7C6F17AC6E58D6EF74">Kang, Woorim</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="2163DD558E14E6974BB4C93BAA7FAB55" type="personal">
|
||
<mods:role id="E79FA515E67FBFD7D9C38798946756C9">
|
||
<mods:roleTerm id="8CCFD5029F3D98C66E3560E526763455">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="E54A3261097BA6D74E3C2A70940D0797">Kim, Pil Soo</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="78F948C3BB58424DBA8A4AA68DCC4E1A" type="personal">
|
||
<mods:role id="2AA47C73A54C9FB1A86AF1E6CEB8932E">
|
||
<mods:roleTerm id="8607D81162D8F23AA3E51D125E6CD013">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="876C6A9278C75C89DF2A182BD52DD421">Hyun, Dong-Wook</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="8CBEBEFC728E8390E4FAEF90E224C2CD" type="personal">
|
||
<mods:role id="6553F3B8B7918DA3BCD6BEA86F17CFAF">
|
||
<mods:roleTerm id="22E93B41805CD5EA91111317004C82E8">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="63891C888B12A2C1102AABBE5A8CFA8B">Tak, Euon Jung</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="49539D620DA2BBC6D3F1B32D0C61CFF0" type="personal">
|
||
<mods:role id="3A659DC5EB91D2961272354733038208">
|
||
<mods:roleTerm id="D05A0EBD64544F74BD9AF831B69A881F">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="14205C504691396E001410E144BF7AA9">Jung, Mi-Ja</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="401155B533CE9FAAB6D883DC836A11FD" type="personal">
|
||
<mods:role id="C7A01BACA7551FF0206602F351AE151C">
|
||
<mods:roleTerm id="50F820CA4259E4B37BA761136EFCB4EC">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="A25E140156A4BB04B9E4A57E8CBF3A8B">Yun, Ji-Hyun</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="4247A1CAC860AF52B86BBFF6A19E618D" type="personal">
|
||
<mods:role id="AE5754A826B7F5DFAFACBFB250A5315E">
|
||
<mods:roleTerm id="9ACF81F84A60C23AA6FF17325A25AB13">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="A1181C36E0611737C558E73E57172B5D">Kim, Min-Soo</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="216E783B06868732489483A07341F275" type="personal">
|
||
<mods:role id="E0DD8F0F866A5293C62A6474757ADE30">
|
||
<mods:roleTerm id="1A150A554B0450DC19677F1A28C30486">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="4CC1757A641B96C40C87921D240B874D">Shin, Na-Ri</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="146742174A18DA1B5B4747A001E1ABEE" type="personal">
|
||
<mods:role id="B506EA3F1C052A8226CD3225546FFC44">
|
||
<mods:roleTerm id="D8E65FA040CBB42953F88FBD0563F809">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="306A22BD2BF1E82D967B6FFB5CC3A86C">Whon, Tae Woong</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="41B8D1980560943F1C5B512C9CC639AF" type="personal">
|
||
<mods:role id="BB9BB9959B0E29ADE6A589BEFC1C98FF">
|
||
<mods:roleTerm id="0BFCFC795277B1F5DD7BDAC9CB5DF6D5">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="CFB524C5C750B58096CD592DBD77F88D">Rho, Jeong Rae</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="EEBD99D163E7A733986272BE9E565619" type="personal">
|
||
<mods:role id="DCDA405D87023DDF96FC35583E219ADD">
|
||
<mods:roleTerm id="8468B893BA4A82D5D5C425F8FAC1C335">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="D5D816A1138843165240E6151C957A2B">Park, Sun Duk</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="D3EAA7621A3CFEEEDA859DE32E83CD4F" type="personal">
|
||
<mods:role id="39EA4EC5725F69F18471A23E94C946D0">
|
||
<mods:roleTerm id="864F51E81C520BA63E091561E93E8030">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="498CEB1A514A9757585551AC0EEF6A48">Shim, Hyung Eun</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="1603DA2BE2C01FCFFF5EC6108233B960" type="personal">
|
||
<mods:role id="535A3FCD8AB262088B118BFC25B41EA2">
|
||
<mods:roleTerm id="84A176E9C9B7000A763D66CBB00C3A25">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="46114B23C73DAB7A91EE0D17E8E27B4F">Bae, Jin-Woo</mods:namePart>
|
||
</mods:name>
|
||
<mods:typeOfResource id="6455DFFA2771ED9EBCD2947417AA7764">text</mods:typeOfResource>
|
||
<mods:relatedItem id="F497D83BF19B70DDFF7498776186985A" type="host">
|
||
<mods:titleInfo id="41D5D1B170FD6DED6F6C3E0056D8686C">
|
||
<mods:title id="B923155171802547A4DE843B9C8128FB">International Journal of Systematic and Evolutionary Microbiology</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:part id="BBEE704458B01B8DDEEA6CC86FF8D59F">
|
||
<mods:date id="646A868C62DA25FA2CD564F8C08F2E9B">2018</mods:date>
|
||
<mods:detail id="D5A29437BB5532071313021EBBAAE800" type="pubDate">
|
||
<mods:number id="A5F37E473E3719DB2C8C934FF4C1A531">2018-06-01</mods:number>
|
||
</mods:detail>
|
||
<mods:detail id="4FDC48CE710EC53A39AD4323C55CFAA6" type="volume">
|
||
<mods:number id="5A6D83E7A75C4CFFE82A84461C714A08">68</mods:number>
|
||
</mods:detail>
|
||
<mods:detail id="17BA057F56E5D55E5F7B4BE7B7D5EF16" type="issue">
|
||
<mods:number id="6D25522B5717596947872D69AD9FDDE9">6</mods:number>
|
||
</mods:detail>
|
||
<mods:extent id="16646B682617B0B18FFCC2C93EB3857C" unit="page">
|
||
<mods:start id="398A560C553FADE3B841EDAE26CF83A5">2068</mods:start>
|
||
<mods:end id="EF838FCEEE1053C5B912651801DB79C9">2073</mods:end>
|
||
</mods:extent>
|
||
</mods:part>
|
||
</mods:relatedItem>
|
||
<mods:location id="99C7D717F7ECC3FDFA23B416E94E1C0B">
|
||
<mods:url id="7B3C1C98461AB96FEF6946011FE166B9">http://dx.doi.org/10.1099/ijsem.0.002797</mods:url>
|
||
</mods:location>
|
||
<mods:classification id="0F72324C5CE0163412DB5D1F7CF6C038">journal article</mods:classification>
|
||
<mods:identifier id="08D0CFD98BC24B62F0C5D8B64C5CAFB6" type="CLB-Dataset">276805</mods:identifier>
|
||
<mods:identifier id="B34CD08B52252739E6117FEA825EBB54" type="DOI">10.1099/ijsem.0.002797</mods:identifier>
|
||
<mods:identifier id="B6C32351C2F1E46401141EE4773AF2A7" type="GBIF-Dataset">61eed1af-f1ce-41f5-9729-eb4a3ed945e9</mods:identifier>
|
||
<mods:identifier id="D919C175E2E32B5D2EC22435D884A4AD" type="ISSN">1466-5034</mods:identifier>
|
||
<mods:identifier id="6D9F24FBECB8152F7F5D946321FDC29E" type="Zenodo-Dep">6223793</mods:identifier>
|
||
</mods:mods>
|
||
<treatment id="CC7887A0FF95FF845313979643D5A86B" ID-GBIF-Taxon="217244662" LSID="urn:lsid:plazi:treatment:CC7887A0FF95FF845313979643D5A86B" httpUri="http://treatment.plazi.org/id/CC7887A0FF95FF845313979643D5A86B" lastPageId="4" lastPageNumber="2072" pageId="3" pageNumber="2071">
|
||
<subSubSection id="0CCB653DFF95FF835313979645CFAB99" pageId="3" pageNumber="2071" type="nomenclature">
|
||
<paragraph id="446E36B6FF95FF835313979645CFAB99" blockId="3.[827,1466,1422,1949]" pageId="3" pageNumber="2071">
|
||
<heading id="1F2681DAFF95FF835313979645CFAB99" allCaps="true" bold="true" fontSize="12" level="2" pageId="3" pageNumber="2071" reason="3">
|
||
<emphasis id="76A5EAA4FF95FF835313979645CFAB99" bold="true" pageId="3" pageNumber="2071">
|
||
DESCRIPTION OF
|
||
<taxonomicName id="83D14D35FF95FF83541897964305ABE2" authority="Sung & Kim & Lee & Kang & Kim & Hyun & Tak & Jung & Yun & Kim & Shin & Whon & Rho & Park & Shim & Bae, 2018" authorityName="Sung & Kim & Lee & Kang & Kim & Hyun & Tak & Jung & Yun & Kim & Shin & Whon & Rho & Park & Shim & Bae" authorityYear="2018" box="[1072,1404,1422,1451]" class="Gammaproteobacteria" family="Aeromonadaceae" genus="Oceanisphaera" kingdom="Bacteria" order="Aeromonadales" pageId="3" pageNumber="2068" phylum="Proteobacteria" rank="species" species="avium" status="sp. nov.">
|
||
<emphasis id="76A5EAA4FF95FF83541897964305ABE2" bold="true" box="[1072,1404,1422,1451]" italics="true" pageId="3" pageNumber="2071">OCEANISPHAERA AVIUM</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="6D9657DFFF95FF83531397AB45CFAB99" box="[827,950,1459,1488]" pageId="3" pageNumber="2071" rank="species">SP. NOV.</taxonomicNameLabel>
|
||
</emphasis>
|
||
</heading>
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="0CCB653DFF95FF83531397C745E2A85F" pageId="3" pageNumber="2071" type="etymology">
|
||
<paragraph id="446E36B6FF95FF83531397C745E2A85F" blockId="3.[827,1466,1422,1949]" pageId="3" pageNumber="2071">
|
||
<taxonomicName id="83D14D35FF95FF83531397C74259ABBE" authority="Sung & Kim & Lee & Kang & Kim & Hyun & Tak & Jung & Yun & Kim & Shin & Whon & Rho & Park & Shim & Bae, 2018" authorityName="Sung & Kim & Lee & Kang & Kim & Hyun & Tak & Jung & Yun & Kim & Shin & Whon & Rho & Park & Shim & Bae" authorityYear="2018" box="[827,1056,1503,1527]" class="Gammaproteobacteria" family="Aeromonadaceae" genus="Oceanisphaera" kingdom="Bacteria" order="Aeromonadales" pageId="3" pageNumber="2071" phylum="Proteobacteria" rank="species" species="avium" status="sp. nov.">
|
||
<emphasis id="76A5EAA4FF95FF83531397C74259ABBE" box="[827,1056,1503,1527]" italics="true" pageId="3" pageNumber="2071">Oceanisphaera avium</emphasis>
|
||
</taxonomicName>
|
||
<taxonomicNameLabel id="6D9657DFFF95FF83540097F84205ABBE" box="[1064,1148,1504,1527]" pageId="3" pageNumber="2071" rank="species">sp. nov.</taxonomicNameLabel>
|
||
(a′ vi.um. L. gen. pl. n.
|
||
<taxonomicName id="83D14D35FF95FF83555E97F843C0ABBE" authorityName="Sung & Kim & Lee & Kang & Kim & Hyun & Tak & Jung & Yun & Kim & Shin & Whon & Rho & Park & Shim & Bae" authorityYear="2018" box="[1398,1465,1504,1527]" class="Gammaproteobacteria" family="Aeromonadaceae" genus="Oceanisphaera" kingdom="Bacteria" order="Aeromonadales" pageId="3" pageNumber="2071" phylum="Proteobacteria" rank="species" species="avium">
|
||
<emphasis id="76A5EAA4FF95FF83555E97F843C0ABBE" box="[1398,1465,1504,1527]" italics="true" pageId="3" pageNumber="2071">avium</emphasis>
|
||
</taxonomicName>
|
||
of birds).
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="0CCB653DFF95FF84531394354694A907" lastPageId="4" lastPageNumber="2072" pageId="3" pageNumber="2071" type="description">
|
||
<paragraph id="446E36B6FF95FF84531394354694A907" blockId="3.[827,1466,1422,1949]" lastBlockId="4.[121,759,1516,1948]" lastPageId="4" lastPageNumber="2072" pageId="3" pageNumber="2071">
|
||
Strain AMac2203
|
||
<superScript id="B3A49BFEFF95FF8353DF943E427AA87E" attach="left" box="[1015,1027,1574,1591]" fontSize="7" pageId="3" pageNumber="2071">T</superScript>
|
||
is a Gram-stain-negative, aerobic, catalase- and oxidase-positive, DNase-negative, rod-shaped, motile bacterial species. Growth occurs optimally at 15– 25
|
||
<superScript id="B3A49BFEFF95FF83537194904519A8DA" attach="right" box="[857,864,1672,1683]" fontSize="6" pageId="3" pageNumber="2071">Ǫ</superScript>
|
||
C, at pH 7–8 and in the presence of 3–5 % (w/v) NaCl. Colonies are circular, smooth and beige in colour after incubation for 2 days at 20
|
||
<superScript id="B3A49BFEFF95FF83547594DF421DA89B" attach="right" box="[1117,1124,1735,1746]" fontSize="6" pageId="3" pageNumber="2071">Ǫ</superScript>
|
||
C on modified TYS agar. Strain AMac2203
|
||
<superScript id="B3A49BFEFF95FF83538694FA45C3A8BA" attach="left" box="[942,954,1762,1779]" fontSize="7" pageId="3" pageNumber="2071">T</superScript>
|
||
can hydrolyse aesculin and possesses catalase, oxidase, esterase (C4), esterase lipase (C8) and leucine arylamidase enzyme activities. Additionally, the isolate can assimilate D,L- lactic acid, pyruvic acid methyl ester, acetic acid, formic acid, succinic acid, bromosuccinic acid, L- alaninamide, D- alanine, L- alanine, L- asparagine, L- aspartic acid, L- glutamic acid, L- histidine, L- leucine, L- ornithine, L- phenylalanine, L- serine, L- threonine and malic acid. The predominant fatty acids are summed feature 3 (C
|
||
<subScript id="D85534F3FF92FF845247942044EEA800" attach="both" box="[623,663,1592,1609]" fontSize="7" pageId="4" pageNumber="2072">16: 0</subScript>
|
||
<emphasis id="76A5EAA4FF92FF8452BF942C44DEA80F" box="[663,679,1588,1606]" italics="true" pageId="4" pageNumber="2072">Ɯ</emphasis>
|
||
7
|
||
<emphasis id="76A5EAA4FF92FF84529C943744C7A80F" box="[692,702,1583,1606]" italics="true" pageId="4" pageNumber="2072">c</emphasis>
|
||
and/ or C
|
||
<subScript id="D85534F3FF92FF845081944146ABA823" attach="both" box="[169,210,1625,1642]" fontSize="7" pageId="4" pageNumber="2072">16: 1</subScript>
|
||
<emphasis id="76A5EAA4FF92FF8450F9944D4698A82E" box="[209,225,1621,1639]" italics="true" pageId="4" pageNumber="2072">Ɯ</emphasis>
|
||
6
|
||
<emphasis id="76A5EAA4FF92FF8450C694484681A82E" box="[238,248,1616,1639]" italics="true" pageId="4" pageNumber="2072">c</emphasis>
|
||
), summed feature 8 (C
|
||
<subScript id="D85534F3FF92FF8451DD94414464A823" attach="both" box="[501,541,1625,1642]" fontSize="7" pageId="4" pageNumber="2072">18: 1</subScript>
|
||
<emphasis id="76A5EAA4FF92FF845235944D4454A82E" box="[541,557,1621,1639]" italics="true" pageId="4" pageNumber="2072">Ɯ</emphasis>
|
||
7
|
||
<emphasis id="76A5EAA4FF92FF8452129448443DA82E" box="[570,580,1616,1639]" italics="true" pageId="4" pageNumber="2072">c</emphasis>
|
||
) and C
|
||
<subScript id="D85534F3FF92FF8452BF944144C6A823" attach="left" box="[663,703,1625,1642]" fontSize="7" pageId="4" pageNumber="2072">16: 0</subScript>
|
||
. The predominant ubiquinone is Q-8, and polar lipids comprise phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, an unidentified amino lipid and an unidentified lipid. The OrthoANI value between strain AMac2203
|
||
<superScript id="B3A49BFEFF92FF8450C494F54681A8B7" attach="left" box="[236,248,1773,1790]" fontSize="7" pageId="4" pageNumber="2072">T</superScript>
|
||
and
|
||
<taxonomicName id="83D14D35FF92FF84511B94EC447AA945" authority="KCTC" authorityName="KCTC" box="[307,515,1780,1804]" class="Gammaproteobacteria" family="Aeromonadaceae" genus="Oceanisphaera" kingdom="Bacteria" order="Aeromonadales" pageId="4" pageNumber="2072" phylum="Proteobacteria" rank="species" species="profunda">
|
||
<emphasis id="76A5EAA4FF92FF84511B94EC47CCA945" box="[307,437,1780,1804]" italics="true" pageId="4" pageNumber="2072">O. profunda</emphasis>
|
||
KCTC
|
||
</taxonomicName>
|
||
32510
|
||
<superScript id="B3A49BFEFF92FF84526494F54421A8B7" attach="left" box="[588,600,1773,1790]" fontSize="7" pageId="4" pageNumber="2072">T</superScript>
|
||
is 77.5 %, and the genomic DNA G+C content of strain AMac2203
|
||
<superScript id="B3A49BFEFF92FF8452E4951644A1A956" attach="left" box="[716,728,1806,1823]" fontSize="7" pageId="4" pageNumber="2072">T</superScript>
|
||
is 47.1 mol%.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<caption id="10AE663EFF92FF845090973B42F0ABE9" ID-DOI="http://doi.org/10.5281/zenodo.6223797" ID-Zenodo-Dep="6223797" httpUri="https://zenodo.org/record/6223797/files/figure.png" pageId="4" pageNumber="2072" startId="4.[184,214,1315,1334]" targetBox="[241,1372,187,1256]" targetPageId="4">
|
||
<paragraph id="446E36B6FF92FF845090973B42F0ABE9" blockId="4.[184,1391,1310,1440]" pageId="4" pageNumber="2072">
|
||
<emphasis id="76A5EAA4FF92FF845090973B4681AB7F" bold="true" box="[184,248,1315,1334]" pageId="4" pageNumber="2072">Fig. 1.</emphasis>
|
||
Phylogenetic tree based on 16S rRNA gene sequences of strain AMac2203
|
||
<superScript id="B3A49BFEFF92FF84538F970645D6AB62" attach="left" box="[935,943,1310,1323]" fontSize="5" pageId="4" pageNumber="2072">T</superScript>
|
||
and type strains of two closely related taxa. The neighbour-joining (NJ) algorithm was employed for reconstruction, and the maximum-parsimony (MP) and maximum-likelihood (ML) algorithms were used for additional analyses. Bootstrap values (>70 %) based on 1000 replicates are shown at the nodes (NJ/MP/ML, respectively). Filled diamonds indicate branches that are found in all trees, including those based on MP and ML.
|
||
<taxonomicName id="83D14D35FF92FF84549F976B4716ABE9" authority="subsp. cloacae ATCC" authorityName="ATCC" class="Gammaproteobacteria" family="Enterobacteriaceae" genus="Enterobacter" kingdom="Bacteria" order="Enterobacteriales" pageId="4" pageNumber="2072" phylum="Proteobacteria" rank="subSpecies" species="cloacae" subSpecies="cloacae">
|
||
<emphasis id="76A5EAA4FF92FF84549F976B4314ABCF" box="[1207,1389,1395,1414]" italics="true" pageId="4" pageNumber="2072">Enterobacter cloacae</emphasis>
|
||
subsp.
|
||
<emphasis id="76A5EAA4FF92FF8450D197954743ABE9" box="[249,314,1421,1440]" italics="true" pageId="4" pageNumber="2072">cloacae</emphasis>
|
||
ATCC
|
||
</taxonomicName>
|
||
13047
|
||
<superScript id="B3A49BFEFF92FF845186979147CFABDF" attach="left" box="[430,438,1417,1430]" fontSize="5" pageId="4" pageNumber="2072">T</superScript>
|
||
was established as an outgroup. Bar, 0.01 substitutions per nucleotide position.
|
||
</paragraph>
|
||
</caption>
|
||
<subSubSection id="0CCB653DFF92FF845051957C43D5A86B" pageId="4" pageNumber="2072" type="materials_examined">
|
||
<paragraph id="446E36B6FF92FF845051957C43D5A86B" blockId="4.[121,759,1516,1948]" lastBlockId="4.[827,1464,1516,1571]" pageId="4" pageNumber="2072">
|
||
<materialsCitation id="F4B93CEBFF92FF845051957C43D5A86B" ID-GBIF-Occurrence="4435832301" collectionCode="AMac" country="South Korea" location="Grand Park Zoo" pageId="4" pageNumber="2072" specimenCode="AMac2203T" specimenCount="1" stateProvince="Seoul" typeStatus="holotype">
|
||
The
|
||
<typeStatus id="9B6A8814FF92FF845093957D4691A934" box="[187,232,1893,1917]" pageId="4" pageNumber="2072">type</typeStatus>
|
||
strain,
|
||
<specimenCode id="14779ECDFF92FF845173957C47A2A926" box="[347,475,1886,1916]" collectionCode="AMac" pageId="4" pageNumber="2072">
|
||
AMac2203
|
||
<superScript id="B3A49BFEFF92FF8451E7954647A2A926" attach="left" box="[463,475,1886,1903]" fontSize="7" pageId="4" pageNumber="2072">T</superScript>
|
||
</specimenCode>
|
||
(=KCTC 62118
|
||
<superScript id="B3A49BFEFF92FF845282954644CFA926" attach="none" box="[682,694,1886,1903]" fontSize="7" pageId="4" pageNumber="2072">T</superScript>
|
||
=JCM 32207
|
||
<superScript id="B3A49BFEFF92FF845090956546BDA9C7" attach="none" box="[184,196,1917,1934]" fontSize="7" pageId="4" pageNumber="2072">T</superScript>
|
||
), was isolated from the gut of the cinereous vulture,
|
||
<taxonomicName id="83D14D35FF92FF8453B797F44203A84D" baseAuthorityName="Linnaeus" baseAuthorityYear="1766" box="[927,1146,1516,1540]" class="Aves" family="Accipitridae" genus="Aegypius" kingdom="Animalia" order="Accipitriformes" pageId="4" pageNumber="2072" phylum="Chordata" rank="species" species="monachus">
|
||
<emphasis id="76A5EAA4FF92FF8453B797F44203A84D" box="[927,1146,1516,1540]" italics="true" pageId="4" pageNumber="2072">Aegypius monachus</emphasis>
|
||
</taxonomicName>
|
||
, from faecal samples collected at the
|
||
<collectingRegion id="8615F854FF92FF8453F894134270A86A" box="[976,1033,1547,1571]" country="South Korea" name="Seoul" pageId="4" pageNumber="2072">Seoul</collectingRegion>
|
||
<location id="410E606DFF92FF84543D941342B4A86B" LSID="urn:lsid:plazi:treatment:CC7887A0FF95FF845313979643D5A86B:410E606DFF92FF84543D941342B4A86B" box="[1045,1229,1547,1571]" country="South Korea" name="Grand Park Zoo" pageId="4" pageNumber="2072" stateProvince="Seoul">Grand Park Zoo</location>
|
||
,
|
||
<collectingCountry id="3CC67626FF92FF8454F5941343D1A86B" box="[1245,1448,1547,1571]" name="South Korea" pageId="4" pageNumber="2072">Republic of Korea</collectingCountry>
|
||
.
|
||
</materialsCitation>
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |