180 lines
17 KiB
XML
180 lines
17 KiB
XML
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<mods:title id="E6F5587DD66AA9B5D67CA84B62623379">A Hotspot of Amoebae Diversity: 8 New Naked Amoebae Associated with the Planktonic Bloom-forming Cyanobacterium Microcystis</mods:title>
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<mods:namePart id="07F8A6C7E03AD00884AFFAC4E2A5886C">Van Wichelen, Jeroen</mods:namePart>
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<mods:namePart id="42099956CD395A29277429AC11649759">D’Hondt, Sofie</mods:namePart>
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<mods:namePart id="A3850EDDB1BF8ED6217937E07D1D1393">Claeys, Myriam</mods:namePart>
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<mods:namePart id="07BC4F28BCFD4991C6E0556FCA3EC4DD">Vyverman, Wim</mods:namePart>
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<mods:namePart id="9A636EA296BE323A65D3B1C9EB0C5EA5">Berney, Cédric</mods:namePart>
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<mods:namePart id="FC093EE7C628C9A80012AAE5F07E7C42">Bass, David</mods:namePart>
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<mods:namePart id="87884C48A17FCB453589D96AF4264225">Vanormelingen, Pieter</mods:namePart>
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<mods:title id="3873685946E863A8DFE179DD9B11241D">Acta Protozoologica</mods:title>
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<mods:date id="3A1C1406CDC576513C37B7353A7FF8F5">2016</mods:date>
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<mods:number id="B28F41751E28BC2CDF11B2CBB1A5508A">55</mods:number>
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<mods:classification id="EDFA1C7A3AFDDB839DC9CA5D7A81ED81">journal article</mods:classification>
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<mods:identifier id="28732914BBED249B79B897F9079F8447" type="CLB-Dataset">298905</mods:identifier>
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<mods:identifier id="17165273E80D0A5C7069790333A7128A" type="DOI">10.4467/16890027AP.16.007.4942</mods:identifier>
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<mods:identifier id="88C048F4C0D4F15348AB4E8B578263CB" type="GBIF-Dataset">54e2a24e-cf3d-47dd-8d52-1cbe13ebd253</mods:identifier>
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<treatment id="0228D806FFB5FF99FC9BFE92FB796671" ID-DOI="http://doi.org/10.5281/zenodo.12538888" ID-GBIF-Taxon="233769585" ID-Zenodo-Dep="12538888" LSID="urn:lsid:plazi:treatment:0228D806FFB5FF99FC9BFE92FB796671" httpUri="http://treatment.plazi.org/id/0228D806FFB5FF99FC9BFE92FB796671" lastPageNumber="82" pageId="21" pageNumber="82">
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<subSubSection id="C29B3A9BFFB5FF99FC9BFE92FBAF6192" pageId="21" pageNumber="82" type="nomenclature">
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<paragraph id="8A3E6910FFB5FF99FC9BFE92FBAF6192" blockId="21.[847,1349,342,403]" pageId="21" pageNumber="82">
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<heading id="D176DE7CFFB5FF99FC9BFE92FBAF6192" fontSize="11" level="2" pageId="21" pageNumber="82" reason="5">
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||
<emphasis id="B8F5B502FFB5FF99FC9BFE92FBAF6192" bold="true" pageId="21" pageNumber="82">
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<taxonomicName id="4D811293FFB5FF99FC9BFE92FBF66192" authority="Van Wichelen & Vanormelingen" authorityName="Van Wichelen & Vanormelingen" authorityYear="2016" class="Tubulinea" genus="Copromyxa" higherTaxonomySource="GBIF" kingdom="Protozoa" pageId="21" pageNumber="82" phylum="Amoebozoa" rank="species" species="vandevyveri" status="sp. nov.">
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<emphasis id="B8F5B502FFB5FF99FC9BFE92FB896170" bold="true" box="[847,1137,342,369]" italics="true" pageId="21" pageNumber="82">Copromyxa vandevyveri</emphasis>
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Van Wichelen & Vanormelingen
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</taxonomicName>
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<taxonomicNameLabel id="A3C60879FFB5FF99FBC1FEBDFBAF6192" box="[1045,1111,377,403]" pageId="21" pageNumber="82" rank="species">sp. n.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C29B3A9BFFB5FF99FC9BFE67FBF563E4" pageId="21" pageNumber="82" type="diagnosis">
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<paragraph id="8A3E6910FFB5FF99FC9BFE67FB34637F" blockId="21.[809,1456,419,1648]" pageId="21" pageNumber="82">
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<emphasis id="B8F5B502FFB5FF99FC9BFE67FC2961BC" bold="true" box="[847,977,419,445]" pageId="21" pageNumber="82">Diagnosis:</emphasis>
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Locomotive amoebae limax-shaped, 20–55 µm long and 8–25 µm wide, displaying anteriorly a well pronounced hyaline cap. Bipodial and multipodial movement common by means of alternating sprouting (eruptive) lobes. Pseudopodia often displaying a few small, sprouting, short-lived subpseudopodia laterally. Occasionally a few adhesive uroidal filaments present. Vesicular nucleus 4–8 µm long and 4–7 µm wide with one centrally to slightly eccentrically located globular nucleolus. Usually one contractile vacuole posteriorly. Cytoplasm contains up to 20 small crystals. Floating forms spherical to irregular, about 15–20 µm in diameter with radially up to 12 small hyaline lobes. Spherical cyst occasionally present.
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</paragraph>
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<paragraph id="8A3E6910FFB5FF99FC9BFC42FBF563E4" blockId="21.[809,1456,419,1648]" pageId="21" pageNumber="82">
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<emphasis id="B8F5B502FFB5FF99FC9BFC42FBC163A1" bold="true" box="[847,1081,902,928]" pageId="21" pageNumber="82">Feeding behavior:</emphasis>
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Grazing on
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<taxonomicName id="4D811293FFB5FF99FB37FC43FA9363A1" authority="Lemmermann, 1907 " box="[1251,1387,903,928]" class="Cyanobacteriia" family="Microcystaceae" genus="Microcystis" kingdom="Bacteria" order="Cyanobacteriales" pageId="21" pageNumber="82" phylum="Cyanobacteria" rank="genus">
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<emphasis id="B8F5B502FFB5FF99FB37FC43FA9363A1" box="[1251,1387,903,928]" italics="true" pageId="21" pageNumber="82">Microcystis</emphasis>
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</taxonomicName>
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cells was observed in the
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<taxonomicName id="4D811293FFB5FF99FBF6FC6EFB5263C2" authority="Lemmermann, 1907 " box="[1058,1194,938,963]" class="Cyanobacteriia" family="Microcystaceae" genus="Microcystis" kingdom="Bacteria" order="Cyanobacteriales" pageId="21" pageNumber="82" phylum="Cyanobacteria" rank="genus">
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<emphasis id="B8F5B502FFB5FF99FBF6FC6EFB5263C2" box="[1058,1194,938,963]" italics="true" pageId="21" pageNumber="82">Microcystis</emphasis>
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</taxonomicName>
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bloom sample and in laboratory cultures.
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</paragraph>
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</subSubSection>
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<subSubSection id="C29B3A9BFFB5FF99FC9BFC2AFBE264D7" pageId="21" pageNumber="82" type="materials_examined">
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||
<paragraph id="8A3E6910FFB5FF99FC9BFC2AFC566471" blockId="21.[809,1456,419,1648]" pageId="21" pageNumber="82">
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<materialsCitation id="3AE9634DFFB5FF99FC9BFC2AFC526471" ID-GBIF-Occurrence="4899472314" collectionCode="DVDPB, NIES" collectorName="Strain A" pageId="21" pageNumber="82" specimenCount="1" typeStatus="holotype">
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<emphasis id="B8F5B502FFB5FF99FC9BFC2AFBEC6409" bold="true" box="[847,1044,1006,1032]" pageId="21" pageNumber="82">
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<typeStatus id="553AD7B2FFB5FF99FC9BFC2AFC746409" box="[847,908,1006,1032]" pageId="21" pageNumber="82">Type</typeStatus>
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material:
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</emphasis>
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<collectorName id="27740CC6FFB5FF99FBFDFC2AFB6F6408" box="[1065,1175,1006,1033]" pageId="21" pageNumber="82">Strain A</collectorName>
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5
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<collectionCode id="EC90F1D5FFB5FF99FB77FC2AFAF06408" box="[1187,1288,1006,1033]" pageId="21" pageNumber="82">DVDPB</collectionCode>
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is available from the
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<collectionCode id="EC90F1D5FFB5FF99FC74FBD5FC19642A" box="[928,993,1041,1067]" country="Japan" httpUri="h" name="National Institute for Environmental Studies" pageId="21" pageNumber="82" type="Other type of research institution/biorepository">NIES</collectionCode>
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Microbial Culture Collection (NIES-3724). The 18S rDNA GenBank accession number is KP719189
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</materialsCitation>
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.
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</paragraph>
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<paragraph id="8A3E6910FFB5FF99FC9BFBBCFBE264D7" blockId="21.[809,1456,419,1648]" pageId="21" pageNumber="82">
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<materialsCitation id="3AE9634DFFB5FF99FC9BFBBCFBED64D7" ID-GBIF-Occurrence="4899472308" collectorName="in De Panne" country="Belgium" location="Drie Vijvers" pageId="21" pageNumber="82" specimenCount="1" typeStatus="holotype">
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<emphasis id="B8F5B502FFB5FF99FC9BFBBCFC056490" bold="true" box="[847,1021,1143,1170]" pageId="21" pageNumber="82">
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<typeStatus id="553AD7B2FFB5FF99FC9BFBBCFC746493" box="[847,908,1144,1170]" pageId="21" pageNumber="82">Type</typeStatus>
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locality:
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</emphasis>
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Isolated from a
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<taxonomicName id="4D811293FFB5FF99FB04FBBCFAA06490" authority="Lemmermann, 1907 " box="[1232,1368,1144,1169]" class="Cyanobacteriia" family="Microcystaceae" genus="Microcystis" kingdom="Bacteria" order="Cyanobacteriales" pageId="21" pageNumber="82" phylum="Cyanobacteria" rank="genus">
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<emphasis id="B8F5B502FFB5FF99FB04FBBCFAA06490" box="[1232,1368,1144,1169]" italics="true" pageId="21" pageNumber="82">Microcystis</emphasis>
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</taxonomicName>
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bloom sample from a fish pond (
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<location id="8F5E3FCBFFB5FF99FBBFFB5EFAFB64B4" LSID="urn:lsid:plazi:treatment:0228D806FFB5FF99FC9BFE92FB796671:8F5E3FCBFFB5FF99FBBFFB5EFAFB64B4" box="[1131,1283,1178,1205]" country="Belgium" name="Drie Vijvers" pageId="21" pageNumber="82">Drie Vijvers</location>
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)
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<collectorName id="27740CC6FFB5FF99FAC3FB5EFA5764B5" box="[1303,1455,1178,1204]" pageId="21" pageNumber="82">in De Panne</collectorName>
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(
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<collectingCountry id="F2962980FFB5FF99FCE5FB78FC6164D6" box="[817,921,1212,1239]" name="Belgium" pageId="21" pageNumber="82">Belgium</collectingCountry>
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) (
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<tableCitation id="C7035CABFFB5FF99FC65FB78FBF164D7" box="[945,1033,1212,1238]" captionStart="Table 1" captionStartId="3.[125,181,491,515]" captionTargetPageId="3" captionText="Table 1. Overview and origin of the isolated strains of Microcystis-associated amoebae described in this paper. GenBank accession numbers of sequences obtained for this study are in bold. The last column indicates number of the specimens used to measure the species dimensions." httpUri="http://table.plazi.org/id/DEFE3998FFA3FF8FFFA9FE2FFBBA621F" pageId="21" pageNumber="82" tableUuid="DEFE3998FFA3FF8FFFA9FE2FFBBA621F">Table 1</tableCitation>
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)
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</materialsCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="C29B3A9BFFB5FF99FC9BFB1AFAB0655F" pageId="21" pageNumber="82" type="etymology">
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<paragraph id="8A3E6910FFB5FF99FC9BFB1AFAB0655F" blockId="21.[809,1456,419,1648]" pageId="21" pageNumber="82">
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<emphasis id="B8F5B502FFB5FF99FC9BFB1AFC2764F9" bold="true" box="[847,991,1246,1272]" pageId="21" pageNumber="82">Etymology:</emphasis>
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<taxonomicName id="4D811293FFB5FF99FC39FB1AFB8364F9" authorityName="Van Wichelen & Vanormelingen" authorityYear="2016" box="[1005,1147,1246,1272]" class="Tubulinea" genus="Copromyxa" higherTaxonomySource="GBIF" kingdom="Protozoa" pageId="21" pageNumber="82" phylum="Amoebozoa" rank="species" species="vandevyveri">
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<emphasis id="B8F5B502FFB5FF99FC39FB1AFB8364F9" box="[1005,1147,1246,1272]" italics="true" pageId="21" pageNumber="82">vandevyveri</emphasis>
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</taxonomicName>
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referring to the first author’s beloved wife Evelien Van de Vyver but also refers to the habitat this amoeba occupies since in Dutch ‘van de vijver’ literally means ‘from the lake’.
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</paragraph>
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</subSubSection>
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<subSubSection id="C29B3A9BFFB5FF99FC9BFAA2FB796671" pageId="21" pageNumber="82" type="diagnosis">
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<paragraph id="8A3E6910FFB5FF99FC9BFAA2FB796671" blockId="21.[809,1456,419,1648]" pageId="21" pageNumber="82">
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<emphasis id="B8F5B502FFB5FF99FC9BFAA2FB916581" bold="true" box="[847,1129,1382,1408]" pageId="21" pageNumber="82">Differential diagnosis:</emphasis>
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Morphologically,
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<taxonomicName id="4D811293FFB5FF99FA85FAA3FC7465A2" authorityName="Van Wichelen & Vanormelingen" authorityYear="2016" class="Tubulinea" genus="Copromyxa" higherTaxonomySource="GBIF" kingdom="Protozoa" pageId="21" pageNumber="82" phylum="Amoebozoa" rank="species" species="vandevyveri">
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<emphasis id="B8F5B502FFB5FF99FA85FAA3FC7465A2" italics="true" pageId="21" pageNumber="82">C. vandevyveri</emphasis>
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</taxonomicName>
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differs slightly from
|
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<taxonomicName id="4D811293FFB5FF99FB4EFA4DFAA565A2" authorityName="Van Wichelen & Vanormelingen" authorityYear="2016" box="[1178,1373,1417,1443]" class="Tubulinea" genus="Copromyxa" higherTaxonomySource="GBIF" kingdom="Protozoa" pageId="21" pageNumber="82" phylum="Amoebozoa" rank="species" species="microcystidis">
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<emphasis id="B8F5B502FFB5FF99FB4EFA4DFAA565A2" box="[1178,1373,1417,1443]" italics="true" pageId="21" pageNumber="82">C. microcystidis</emphasis>
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</taxonomicName>
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by its less eruptive-like pseudopodium formation, its longer, slender subpseudopodia during non-oriented movement (max. 25 µm long compared to 13 µm in
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<taxonomicName id="4D811293FFB5FF99FA95FA34FC79662A" authorityName="Van Wichelen & Vanormelingen" authorityYear="2016" class="Tubulinea" genus="Copromyxa" higherTaxonomySource="GBIF" kingdom="Protozoa" pageId="21" pageNumber="82" phylum="Amoebozoa" rank="species" species="microcystidis">
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<emphasis id="B8F5B502FFB5FF99FA95FA34FC79662A" italics="true" pageId="21" pageNumber="82">C. microcystidis</emphasis>
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</taxonomicName>
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) and the absence of large crystals in the cytoplasm. Also its 18S rDNA sequence is clearly different from that of
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<taxonomicName id="4D811293FFB5FF99FC68F992FB816671" authorityName="Van Wichelen & Vanormelingen" authorityYear="2016" box="[956,1145,1622,1648]" class="Tubulinea" genus="Copromyxa" higherTaxonomySource="GBIF" kingdom="Protozoa" pageId="21" pageNumber="82" phylum="Amoebozoa" rank="species" species="microcystidis">
|
||
<emphasis id="B8F5B502FFB5FF99FC68F992FB816671" box="[956,1145,1622,1648]" italics="true" pageId="21" pageNumber="82">C. microcystidis</emphasis>
|
||
</taxonomicName>
|
||
.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |