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<mods:title id="800790BB8B51878EFD423D426C8EF83B">Evaluating recent taxonomic changes for alligator snapping turtles (Testudines: Chelydridae)</mods:title>
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<paragraph id="8BFC1D55FF86FF87FF6DFA7D7BB9FA14" blockId="0.[151,482,1411,1438]" box="[151,482,1411,1438]" pageId="0" pageNumber="447">
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<taxonomicName id="4C4366D6FF86FF87FF6DFA7D7B69FA17" box="[151,306,1411,1437]" class="Reptilia" family="Chelydridae" genus="Macrochelys" kingdom="Animalia" order="Testudines" pageId="0" pageNumber="447" phylum="Chordata" rank="genus">
<emphasis id="B937C147FF86FF87FF6DFA7D7B69FA17" bold="true" box="[151,306,1411,1437]" italics="true" pageId="0" pageNumber="447">Macrochelys</emphasis>
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phylogenetics
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<paragraph id="8BFC1D55FF86FF87FF6DFA3779DDF9E1" blockId="0.[151,1436,1481,2031]" pageId="0" pageNumber="447">
Geographic variation in
<taxonomicName id="4C4366D6FF86FF87FE60FA377878FA6A" box="[410,547,1481,1504]" class="Reptilia" family="Chelydridae" genus="Macrochelys" kingdom="Animalia" order="Testudines" pageId="0" pageNumber="447" phylum="Chordata" rank="genus">
<emphasis id="B937C147FF86FF87FE60FA377878FA6A" box="[410,547,1481,1504]" italics="true" pageId="0" pageNumber="447">Macrochelys</emphasis>
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morphology has been described among populations (e.g., number of supramarginal scutes, skull shape;
<bibRefCitation id="EFD260A4FF86FF87FE96FA127855F989" author="Pritchard" box="[364,526,1516,1539]" pageId="0" pageNumber="447" refString="Pritchard, P. C. H. (1989) The Alligator Snapping Turtle: Biology and Conservation. Milwaukee Public Museum, Milwaukee, 104 pp." type="book" year="1989">Pritchard 1989</bibRefCitation>
), but populations have historically been treated as comprising a single, wide-ranging species. However, because other highly aquatic organisms in Gulf Coastal drainages exhibit patterns of drainage-specific endemism (e.g.,
<taxonomicName id="4C4366D6FF86FF87FEABF9CF7B9DF9C2" box="[337,454,1585,1608]" class="Reptilia" family="Emydidae" genus="Graptemys" kingdom="Animalia" order="Testudines" pageId="0" pageNumber="447" phylum="Chordata" rank="genus">
<emphasis id="B937C147FF86FF87FEABF9CF7B9DF9C2" box="[337,454,1585,1608]" italics="true" pageId="0" pageNumber="447">Graptemys</emphasis>
</taxonomicName>
;
<bibRefCitation id="EFD260A4FF86FF87FE23F9CF78FDF9C2" author="Ennen" box="[473,678,1585,1608]" pageId="0" pageNumber="447" refString="Ennen, J. R., Lovich, J. E., Kreiser, B. R., Selman, W. &amp; Qualls, C. P. (2010) Genetic and morphological variation between populations of the Pascagoula Map Turtle (Graptemys gibbonsi) in the Pearl and Pascagoula rivers with description of a new species. Chelonian Conservation and Biology, 9, 98 - 113. http: // dx. doi. org / 10.2744 / CCB- 0835.1" type="journal article" year="2010">
Ennen
<emphasis id="B937C147FF86FF87FDD2F9CF7800F9C2" box="[552,603,1585,1608]" italics="true" pageId="0" pageNumber="447">et al</emphasis>
. 2010
</bibRefCitation>
), two studies in the last 16 years have explored population genetic structure of
<taxonomicName id="4C4366D6FF86FF87FEE2F9AA7BFBF9E1" box="[280,416,1620,1643]" class="Reptilia" family="Chelydridae" genus="Macrochelys" kingdom="Animalia" order="Testudines" pageId="0" pageNumber="447" phylum="Chordata" rank="genus">
<emphasis id="B937C147FF86FF87FEE2F9AA7BFBF9E1" box="[280,416,1620,1643]" italics="true" pageId="0" pageNumber="447">Macrochelys</emphasis>
</taxonomicName>
and systematic implications of that structure.
</paragraph>
<paragraph id="8BFC1D55FF86FF86FF3DF98778CFFED6" blockId="0.[151,1436,1481,2031]" lastBlockId="1.[151,1436,152,348]" lastPageId="1" lastPageNumber="448" pageId="0" pageNumber="447">
<bibRefCitation id="EFD260A4FF86FF87FF3DF9877BC1F91A" author="Roman" box="[199,410,1657,1680]" pageId="0" pageNumber="447" refString="Roman, J., Santhuff, S. D., Moler, P. E. &amp; Bowen, B. W. (1999) Population structure and cryptic evolutionary units in the alligator snapping turtle. Conservation Biology, 13, 135 - 142. http: // dx. doi. org / 10.1046 / j. 1523 - 1739.1999.98007. x" type="journal article" year="1999">
Roman
<emphasis id="B937C147FF86FF87FEE6F9877B10F91A" box="[284,331,1657,1680]" italics="true" pageId="0" pageNumber="447">et al</emphasis>
. (1999
</bibRefCitation>
; hereafter Roman
<emphasis id="B937C147FF86FF87FD91F98778C1F91A" box="[619,666,1657,1680]" italics="true" pageId="0" pageNumber="447">et al</emphasis>
.) sequenced two partial genes of the mitochondrial genome (tRNA
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, 5 end of the control region) and found populations to exhibit drainage-specific haplotypes; a gene tree generated from these data recovered three major clades of
<taxonomicName id="4C4366D6FF86FF87FD92F9407935F95F" box="[616,878,1726,1749]" class="Reptilia" family="Chelydridae" genus="Macrochelys" kingdom="Animalia" order="Testudines" pageId="0" pageNumber="447" phylum="Chordata" rank="species" species="temminckii">
<emphasis id="B937C147FF86FF87FD92F9407935F95F" box="[616,878,1726,1749]" italics="true" pageId="0" pageNumber="447">Macrochelys temminckii</emphasis>
</taxonomicName>
(sensu lato): a western clade including populations from the Trinity River to the drainages of Pensacola Bay, a central clade from the Choctawhatchee River to the Ochlockonee River, and an eastern clade restricted to the Suwannee River. In this hypothesis, the Eastern (Suwannee) population (hereafter referred to as the Eastern (Suwannee) assemblage, for consistency with literature) was basal and sister to a well-supported monophyletic group comprising populations from the central and western distribution (hereafter, central and western assemblages, respectively). However, because mtDNA is maternally inherited and fails to detect male-mediated dispersal,
<bibRefCitation id="EFD260A4FF86FF87FE08F8707890F82F" author="Echelle" box="[498,715,1934,1957]" pageId="0" pageNumber="447" refString="Echelle, A., Hackler, J. C., Lack, J. B., Ballard, S. R., Roman, J., Fox, S. F., Leslie, D. M. &amp; Van Den Bussche, R. A. (2010) Conservation genetics of the alligator snapping turtle: Cytonuclear evidence of range-wide bottleneck effects and unusually pronounced geographic structure. Conservation Genetics, 11, 1375 - 1387. http: // dx. doi. org / 10.1007 / s 10592 - 009 - 9966 - 1" type="journal article" year="2010">
Echelle
<emphasis id="B937C147FF86FF87FDB1F8707820F82F" box="[587,635,1934,1957]" italics="true" pageId="0" pageNumber="447">et al</emphasis>
. (2010
</bibRefCitation>
; hereafter Echelle
<emphasis id="B937C147FF86FF87FC6CF870799DF82F" box="[918,966,1934,1957]" italics="true" pageId="0" pageNumber="447">et al</emphasis>
.) analyzed microsatellites from the nuclear genome to further test for population genetic structure, compare phylogeographic patterns between nuclear and mtDNA, and test for past population bottlenecks. Comparison of a neighbor-joining tree summarizing microsatellite variation (F ST values) and a parsimony tree summarizing mtDNA haplotypes presented generally similar relationships, except for the drainages of Pensacola Bay, which were described by microsatellite data as being so deeply divergent as to question their membership in either the central or western clades of Roman
<emphasis id="B937C147FF87FF86FCC8FF237939FF7E" box="[818,866,221,244]" italics="true" pageId="1" pageNumber="448">et al</emphasis>
. Both Roman
<emphasis id="B937C147FF87FF86FBFBFF237E6AFF7E" box="[1025,1073,221,244]" italics="true" pageId="1" pageNumber="448">et al</emphasis>
. and Echelle
<emphasis id="B937C147FF87FF86FB3FFF237EAEFF7E" box="[1221,1269,221,244]" italics="true" pageId="1" pageNumber="448">et al</emphasis>
. suggested low dispersal among drainages, high population structure among drainages, and potential for cryptic species within
<taxonomicName id="4C4366D6FF87FF86FF6DFEDC7B7BFEB3" box="[151,288,290,313]" class="Reptilia" family="Chelydridae" genus="Macrochelys" kingdom="Animalia" order="Testudines" pageId="1" pageNumber="448" phylum="Chordata" rank="genus">
<emphasis id="B937C147FF87FF86FF6DFEDC7B7BFEB3" box="[151,288,290,313]" italics="true" pageId="1" pageNumber="448">Macrochelys</emphasis>
</taxonomicName>
, but, in the absence of a thorough morphological investigation and because of nuclear-mitochondrial discordance, no taxonomic changes were made.
</paragraph>
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