162 lines
13 KiB
XML
162 lines
13 KiB
XML
<document id="47CAF2B62F9BC9C17A0F1302253241AF" ID-DOI="10.3897/mycokeys.107.125549" ID-publisher-id="125549" URI-arpha="3EA0E723-E6FC-58B0-8491-ED4CC2FBAB87" article-type="research-article" checkinTime="1723223129036" checkinUser="pensoft" docAuthor="Tedersoo, Leho, Magurno, Franco, Alkahtani, Saad & Mikryukov, Vladimir" docDate="2024" docId="5DE29B8FAEEF59BB8DB13345828F9AE4" docLanguage="en" docName="MycoKeys 107: 249-271" docOrigin="MycoKeys 107" docSource="https://mycokeys.pensoft.net/article/125549/download/xml/" docStyle="DocumentStyle:PensoftTaxPub.0000.journal_article.mycokeys" docStyleName="PensoftTaxPub.0000.journal_article.mycokeys" docTitle="Nikkaluokta Tedersoo 2024, gen. nov." docType="treatment" docVersion="1" dtd-version="3.0" lastPageNumber="271" masterDocId="3EA0E723E6FC58B08491ED4CC2FBAB87" masterDocTitle="Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)" masterLastPageNumber="271" masterPageNumber="249" pageNumber="249" updateTime="1723223268898" updateUser="pensoft">
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<mods:titleInfo id="6D648447E3ACF64005561A3A1D13228B">
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<mods:title id="DFE2DAF2E642547C9DE5A001C529CE20">Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)</mods:title>
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</mods:titleInfo>
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<mods:name id="F6D7EBE2914C018FFAA4AA0595A29827" type="personal">
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<mods:role id="0B0CCEB323CFCB3B56996EE872207484">
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<mods:roleTerm id="5C514DFEDC6A2DE60A95163A471C7AD3">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="766A52E306AE7B97D842EA1AD3782B5A">Tedersoo, Leho</mods:namePart>
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<mods:affiliation id="68FDE2DBB604DD8E33181C9FA974367F">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia & Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="D19EA9E4D3AE75D71DF76A407D5CC03C" type="personal">
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<mods:role id="C0557B5C70DE7077915D16A39770075E">
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<mods:roleTerm id="70336C1CC100661523703D93A5D3CE84">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="A6D1289FBBB20C45D85D36083A87E32A">Magurno, Franco</mods:namePart>
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<mods:nameIdentifier id="4ED8F25328FFD1D396BBD16CF8CBA541" type="ORCID">0000-0002-3117-8149</mods:nameIdentifier>
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<mods:affiliation id="8AE43F5BC5D7AFB4B8F895A0D45D800E">Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellońska 28, 40 - 032 Katowice, Poland</mods:affiliation>
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</mods:name>
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<mods:name id="0F64505741EB29789A01AC60CC60DB5C" type="personal">
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<mods:roleTerm id="48B878DA7FA06EAFC26361DD2A4B62CD">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="77C5ECBAC5681221B3B2C6631D035905">Alkahtani, Saad</mods:namePart>
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<mods:nameIdentifier id="C76963A1043770A6C0E2E84D63932C0A" type="ORCID">0000-0001-7381-5110</mods:nameIdentifier>
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<mods:affiliation id="08EED5DA5C982E44C822FD2661C434DD">Department of Zoology, College of Science, King Saud University, 12371 Riyadh, Saudi Arabia</mods:affiliation>
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</mods:name>
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<mods:name id="9C4B4EEBC4A0DF3D6265FABB2368AA86" type="personal">
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<mods:roleTerm id="15C87528462FB609D3CF6EFA3637CB62">Author</mods:roleTerm>
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</mods:role>
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<mods:namePart id="83C819DF5E9DB41522C09AE2C35F89ED">Mikryukov, Vladimir</mods:namePart>
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<mods:nameIdentifier id="010ACFE61A1FC0485725A95679F02F3C" type="ORCID">0000-0003-2786-2690</mods:nameIdentifier>
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<mods:affiliation id="EDDC41CD40F0BAAEAB17565C27E23A9B">Mycology and Microbiology Center, University of Tartu, 2 Liivi, 50409 Tartu, Estonia</mods:affiliation>
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</mods:name>
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<mods:typeOfResource id="CFFFC1117C0536B2D6D196C4AC7CB823">text</mods:typeOfResource>
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<mods:titleInfo id="812EBB68B83EB83003EFD6990D74BCAF">
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<mods:title id="C7B117F6A7DEB193FD6AE3652E98C1D0">MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part id="665E43463F451E79ECB6FCBF07FA713C">
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<mods:date id="E92A98010D3175A7CCFE38197205E4E5">2024</mods:date>
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<mods:detail id="2712E09E8B0AEF9037F2157A59D8584C" type="pubDate">
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<mods:number id="0D488A8C94A3E9F345A1923E5099EB7E">2024-08-09</mods:number>
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</mods:detail>
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<mods:detail id="9BDDDB4B3B356D24728FD3A26CC2CB0C" type="volume">
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<mods:number id="24D1304B60DCA5219097ED12176A4F3C">107</mods:number>
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</mods:detail>
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<mods:extent id="5F85DA970D6082DD1C3C126ED6DBEAF6" unit="page">
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<mods:start id="4C1377B0181E245C0D749AB346FE9126">249</mods:start>
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<mods:end id="32FBC11096451483602293BC37638DA5">271</mods:end>
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</mods:extent>
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<mods:classification id="4723AC4377CEEDC71DB64C0C55F6ACE1">journal article</mods:classification>
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<mods:identifier id="91295D97E0DE6D0CA6AF23DBE4A0F3C0" type="DOI">10.3897/mycokeys.107.125549</mods:identifier>
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</mods:mods>
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<treatment id="5DE29B8FAEEF59BB8DB13345828F9AE4" ID-arpha="5DE29B8F-AEEF-59BB-8DB1-3345828F9AE4" ID-mycobank="853606" LSID="urn:lsid:plazi:treatment:5DE29B8FAEEF59BB8DB13345828F9AE4" httpUri="http://treatment.plazi.org/id/5DE29B8FAEEF59BB8DB13345828F9AE4">
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<subSubSection id="2B3BF2DB55543D9678A6BD3CEEAF6089" type="nomenclature">
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<paragraph id="04C39E9243F947DDD54B1495FA71CB06">
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<taxonomicName id="905A9C9EFBCD76B5F1AA76DE1658E51B" authority="Tedersoo" authorityName="Tedersoo" authorityYear="2024" class="Magnoliopsida" family="Nikkaluoktaceae" genus="Nikkaluokta" kingdom="Fungi" order="Nikkaluoktales" phylum="Tracheophyta" rank="genus" status="gen. nov.">
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<emphasis id="73CEFF07ACBBFA2E46E42C9B6E2E1DD8" italics="true">Nikkaluokta</emphasis>
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Tedersoo
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</taxonomicName>
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<taxonomicNameLabel id="0EF177821305BBA25EE0DE8C775DE840" rank="genus">gen. nov.</taxonomicNameLabel>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EJ1AK" type="type species">
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<paragraph id="8DB95F3129CF330C64ECCB14C553782E">
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<heading id="FD781492C0F58D08B47F4FFDAA0B73B2" reason="title">
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<typeStatus id="76F32692887B9D7EA69DA7BDF9610C34">Type</typeStatus>
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species.
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</heading>
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</paragraph>
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<paragraph id="D25D5597552ABB05BDE5FE3DD7FD1E7C">
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<taxonomicName id="CAB5BC8A9951BE6EBE0FCEDB474CF90D" authority="Tedersoo." authorityName="Tedersoo." class="Magnoliopsida" family="Dipterocarpaceae" genus="Nikkaluokta" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="species" species="mahdiehiae">
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<emphasis id="C2D010F4DC481EE4FC7AF7AB40C7E36D" italics="true">Nikkaluokta mahdiehiae</emphasis>
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Tedersoo.
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</taxonomicName>
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0E11AK" type="description">
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<paragraph id="9A781901B6EA6A11D99E65808F31286D">
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<heading id="959E5AF3E19F516B57340DC48BC4B359" reason="title">Description.</heading>
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</paragraph>
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<paragraph id="A7B1AB9FB459D637E1DF988676174181">
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Covers the monophyletic group in
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<tp_taxon-name id="4A3031A2D5B0277F0BBE980851ADB8E3">
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<tp_taxon-name-part id="1C9B879691B7453414F79E432144BB12" taxon-name-part-type="order">Nikkaluoktales</tp_taxon-name-part>
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</tp_taxon-name>
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(Fig.
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<figureCitation id="EF882238944EDFF24F126C4E421FE4C0" captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogenetic position of genera and genus-level groups of Endogonomycetes based on Maximum Likelihood analysis of SSU- 5.8 S-LSU sequences. The clades are collapsed, with the number of sequences included in parentheses. Question marks above branches indicate low ultra-rapid bootstrap support (< 95). Orders are highlighted in different colours. The uncollapsed phylogram is given in Suppl. material 3." figureDoi="10.3897/mycokeys.107.125549.figure2" httpUri="https://binary.pensoft.net/fig/1111389">2</figureCitation>
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). Phylogenetically delimited as the least inclusive clade covering sequence accessions EUK 1203196, EUK 1600291, EUK 1600289, EUK 1600235, EUK 1600225, EUK 1600250 and EUK 1600248 (Suppl. material
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<xref id="95FD43E8F674D58EB9C9E6FD38FFF9BD" ref-type="supplementary-material" rid="S3">3</xref>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="SECID0EN2AK" type="notes">
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<paragraph id="F6CA18552A23191BE8F5723FE807065E">
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<heading id="2B2FDE29BC34560F88E93B0F1F367D01" reason="title">Notes.</heading>
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</paragraph>
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<paragraph id="B4D73D9ABFE0C65312CB2DBB3FD3323D">
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Based on
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<abbrev id="ABBRID0ET2AK" xlink_title="internal transcribed spacer">
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<collectionCode id="9D7380900E46B06BE3A4C75864FAD56F">ITS</collectionCode>
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</abbrev>
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and
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<collectionCode id="2845EE78C1E0F2B526DA08A761E94BD7" country="USA" httpUri="http://biocol.org/urn:lsid:biocol.org:col:15590" lsid="urn:lsid:biocol.org:col:15590" name="Louisiana State University - Herbarium" type="Herbarium">LSU</collectionCode>
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sequences,
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<taxonomicName id="3CE0B3EF2DFF9EB0F7651A6F626EE561" class="Magnoliopsida" family="Dipterocarpaceae" genus="Nikkaluokta" kingdom="Plantae" order="Malvales" phylum="Tracheophyta" rank="genus">
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<emphasis id="65F0147B1D36C0701BF7C10EE6F9ECEB" italics="true">Nikkaluokta</emphasis>
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</taxonomicName>
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is comprised of 15–20 species, some of which are represented by sequences EUK 1603884 (
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<abbrev id="ABBRID0E52AK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="EE63061DCE9E5181FBB3B557ECE87BD1" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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4406, mixed coniferous forest soil in Tarumaa,
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<collectingCountry id="7B6ECDDA876F650E7463FB092F749B62" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0EF3AK" specific-use="{"type":"Point","coordinates":[27.153330,59.207450]}">
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<geoCoordinate id="9E3EA5DFFAFBEF279286C98D5CF2F9C2" degrees="59.20745" direction="north" orientation="latitude" precision="1" value="59.20745">59.20745 ° N</geoCoordinate>
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,
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<geoCoordinate id="16B091EC962FB5A324FFEF2665B26763" degrees="27.15333" direction="east" orientation="longitude" precision="1" value="27.15333">27.15333 ° E</geoCoordinate>
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</named-content>
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); EUK 1603411 (
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<abbrev id="ABBRID0EK3AK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectionCode id="313F75FF7D5FB5D9A42680D5392AD2E3" country="Switzerland" lsid="urn:lsid:biocol.org:col:15706" name="Conservatoire et Jardin botaniques de la Ville de Genève" type="Herbarium">G</collectionCode>
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4462,
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<taxonomicName id="31C2F9F43D4042E3B68CCF820E3121E8" class="Magnoliopsida" family="Salicaceae" genus="Salix" kingdom="Plantae" order="Malpighiales" phylum="Tracheophyta" rank="species" species="viminalis">
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<emphasis id="10CF6260AB2D7C4D073AC05F48E03F3A" italics="true">Salix viminalis</emphasis>
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</taxonomicName>
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energy plantation soil in Kambja,
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<collectingCountry id="DCF1B4842D3717FA22FF9C237CF73FE4" name="Estonia">Estonia</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0E33AK" specific-use="{"type":"Point","coordinates":[26.712760,58.251660]}">
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<geoCoordinate id="2AB4A166386E3C38F31B6BD913CBBA69" degrees="58.25166" direction="north" orientation="latitude" precision="1" value="58.25166">58.25166 ° N</geoCoordinate>
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,
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<geoCoordinate id="ACC18DDBA56A63DAA6E160861376ED06" degrees="26.71276" direction="east" orientation="longitude" precision="1" value="26.71276">26.71276 ° E</geoCoordinate>
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</named-content>
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); and EUK 0006485 (
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<abbrev id="ABBRID0EB4AK" xlink_title="Global Soil Mycobiome consortium">GSMc</abbrev>
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plot
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<collectingCountry id="762A7B9CEDDE876E834AC6177BA6EF09" name="Mexico">MX</collectingCountry>
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23,
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<taxonomicName id="E2DAC331E024EF6FBAE6318A06E07EF8" class="Pinopsida" family="Pinaceae" genus="Pinus" kingdom="Plantae" order="Pinales" phylum="Tracheophyta" rank="species" species="hartwegii">
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<emphasis id="6F00ED914A931C36B0B7A162BA3358FB" italics="true">Pinus hartwegii</emphasis>
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</taxonomicName>
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montane forest soil in Iztaccihuatl,
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<collectingCountry id="0D13C3EE44A95AF6431CE9C799C5C86E" name="Mexico">Mexico</collectingCountry>
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,
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<named-content content-type="dwc:verbatimCoordinates" id="NCID0ET4AK" specific-use="{"type":"Point","coordinates":[98.659720,19.126220]}">
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<geoCoordinate id="F3A1367B9AED2795F344D79D5DC17390" degrees="19.12622" direction="north" orientation="latitude" precision="1" value="19.12622">19.12622 ° N</geoCoordinate>
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, -
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<geoCoordinate id="1E3E56F6DFDE2365D3CBF303DE51C03E" degrees="98.65972" direction="east" orientation="longitude" precision="1" value="98.65972">98.65972 ° E</geoCoordinate>
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</named-content>
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).
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |