197 lines
19 KiB
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197 lines
19 KiB
XML
<document ID-DOI="10.1371/journal.pone.0179555" ID-GBIF-Dataset="6ea2cc5c-857b-4b47-8135-8bff7efbd1fc" ID-PMC="PMC5526618" ID-PubMed="28742835" ID-Zenodo-Dep="4251352" approvedBy="poa" checkinTime="1604676189431" checkinUser="tatiana" docAuthor="Voon-Ching Lim, Rosli Ramli, Subha Bhassu & John-James Wilson" docDate="2017" docId="03F3F77FFF89FF95FDB4D258BA80FBE8" docLanguage="en" docName="PLoSOne.12.7.e0179555.pdf.imf" docOrigin="PLoS ONE 12 (7)" docStyle="DocumentStyle{}" docTitle="Hipposideros ipposideros subsp. dyacorum (Thomas) 1902" docType="treatment" docVersion="7" lastPageNumber="24" masterDocId="FFCA8F07FF9EFF82FF81D072BF4BFFA2" masterDocTitle="A checklist of the bats of Peninsular Malaysia and progress towards a DNA barcode reference library" masterLastPageNumber="65" masterPageNumber="1" pageNumber="24" updateTime="1668143238971" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>A checklist of the bats of Peninsular Malaysia and progress towards a DNA barcode reference library</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Voon-Ching Lim</mods:namePart>
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<mods:affiliation>Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia</mods:affiliation>
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<mods:nameIdentifier type="email">voonchinglim@gmail.com</mods:nameIdentifier>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Rosli Ramli</mods:namePart>
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<mods:affiliation>Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Subha Bhassu</mods:namePart>
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<mods:affiliation>Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia,</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>John-James Wilson</mods:namePart>
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<mods:affiliation>International College Beijing, China Agricultural University, Beijing, P. R. China</mods:affiliation>
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<mods:nameIdentifier type="email">wilso04@gmail.com</mods:nameIdentifier>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>PLoS ONE</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2017</mods:date>
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<mods:detail type="pubDate">
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<mods:number>2017-07-25</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>12</mods:number>
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</mods:detail>
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<mods:detail type="issue">
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<mods:number>7</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>1</mods:start>
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<mods:end>65</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">10.1371/journal.pone.0179555</mods:identifier>
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<mods:identifier type="GBIF-Dataset">6ea2cc5c-857b-4b47-8135-8bff7efbd1fc</mods:identifier>
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<mods:identifier type="PMC">PMC5526618</mods:identifier>
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<mods:identifier type="PubMed">28742835</mods:identifier>
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<mods:identifier type="Zenodo-Dep">4251352</mods:identifier>
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</mods:mods>
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<treatment ID-DOI="http://doi.org/10.5281/zenodo.4343686" ID-GBIF-Taxon="168816158" ID-Zenodo-Dep="4343686" LSID="urn:lsid:plazi:treatment:03F3F77FFF89FF95FDB4D258BA80FBE8" httpUri="http://treatment.plazi.org/id/03F3F77FFF89FF95FDB4D258BA80FBE8" lastPageNumber="24" pageId="23" pageNumber="24">
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<subSubSection box="[565,995,554,578]" pageId="23" pageNumber="24" type="nomenclature">
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<paragraph blockId="23.[533,1536,554,1098]" box="[565,995,554,578]" pageId="23" pageNumber="24">
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<heading box="[565,990,554,578]" pageId="23" pageNumber="24">
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<taxonomicName authorityName="(Thomas)" authorityYear="1902" box="[565,822,554,578]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="23" pageNumber="24" phylum="Chordata" rank="subSpecies" species="ipposideros" subSpecies="dyacorum">
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<emphasis bold="true" box="[565,822,554,578]" italics="true" pageId="23" pageNumber="24">Hipposideros dyacorum</emphasis>
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</taxonomicName>
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[Thomas, 1902
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</heading>
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]
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</paragraph>
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</subSubSection>
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<subSubSection pageId="23" pageNumber="24" type="reference_group">
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<paragraph blockId="23.[533,1536,554,1098]" pageId="23" pageNumber="24">
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<taxonomicName authority="Thomas, 1902: 271" authorityName="Thomas" authorityPageNumber="271" authorityYear="1902" box="[565,1018,589,613]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="23" pageNumber="24" phylum="Chordata" rank="species" species="dyacorum">
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<emphasis box="[565,810,589,613]" italics="true" pageId="23" pageNumber="24">Hipposideros dyacorum</emphasis>
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<materialsCitation ID-GBIF-Occurrence="2960680347" box="[817,1018,589,613]" collectionCode="BM" collectorName="Charles Hose" country="Malaysia" location="Mountain Mulu" municipality="Baram" pageId="23" pageNumber="24" specimenCount="1" stateProvince="Sarawak">Thomas, 1902: 271</materialsCitation>
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</taxonomicName>
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;
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<location LSID="urn:lsid:plazi:treatment:03F3F77FFF89FF95FDB4D258BA80FBE8:8E8510B2FF89FF95FB85D23FBBFAFDC7" box="[1028,1201,589,613]" country="Malaysia" municipality="Baram" name="Mountain Mulu" pageId="23" pageNumber="24" stateProvince="Sarawak">Mountain Mulu</location>
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,
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<collectingMunicipality box="[1211,1283,589,613]" pageId="23" pageNumber="24">Baram</collectingMunicipality>
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,
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<collectingRegion box="[1294,1385,589,613]" country="Malaysia" name="Sarawak" pageId="23" pageNumber="24">Sarawak</collectingRegion>
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,
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<collectingCountry box="[1394,1525,589,613]" name="Malaysia" pageId="23" pageNumber="24">MALAYSIA</collectingCountry>
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(
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<collectorName box="[541,686,624,648]" pageId="23" pageNumber="24">Charles Hose</collectorName>
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, collector; BM(NH) 1894.9.29.10) [
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<bibRefCitation author="Thomas O." box="[1059,1097,624,648]" journalOrPublisher="Annals Mag Nat Hist." pageId="23" pageNumber="24" pagination="271 - 272" part="9" refId="ref43303" refString="131. Thomas O. A new Hipposideros from Borneo. Annals Mag Nat Hist. 1902; 9: 271 - 272." title="A new Hipposideros from Borneo" type="journal article" year="1902">131</bibRefCitation>
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].
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</paragraph>
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</subSubSection>
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<subSubSection box="[565,1064,658,682]" pageId="23" pageNumber="24" type="vernacular_names">
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<paragraph blockId="23.[533,1536,554,1098]" box="[565,1064,658,682]" pageId="23" pageNumber="24">
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<emphasis bold="true" box="[565,834,658,682]" pageId="23" pageNumber="24">Common English name:</emphasis>
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Dayak Roundleaf Bat
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</paragraph>
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</subSubSection>
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<subSubSection pageId="23" pageNumber="24" type="materials_examined">
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<paragraph blockId="23.[533,1536,554,1098]" pageId="23" pageNumber="24">
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<emphasis bold="true" box="[565,832,693,717]" pageId="23" pageNumber="24">Barcode Index Number:</emphasis>
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<collectionCode box="[838,908,693,717]" pageId="23" pageNumber="24">BOLD</collectionCode>
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:
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<collectionCode box="[911,967,693,717]" pageId="23" pageNumber="24">AAD</collectionCode>
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0486 (1 DNA barcode is from Peninsular
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<collectingCountry box="[1409,1505,693,717]" name="Malaysia" pageId="23" pageNumber="24">Malaysia</collectingCountry>
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;
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<figureCitation box="[533,586,728,752]" captionStart="Fig 4" captionStartId="18.[500,532,1848,1867]" captionTargetBox="[500,1536,208,1832]" captionTargetId="figure-1@18.[500,1536,208,1832]" captionTargetPageId="18" captionText="Fig 4. Neighbour-joining tree showing all available DNA barcodes for species in family Hipposideridae reported from Peninsular Malaysia. The percentage of pseudoreplicate trees (±70%) in which the DNA barcodes clustered together in the bootstrap test (500 pseudoreplicates) are shown above the branches. Abbreviation as follows: PM = Peninsular Malaysia,VN = Vietnam, BN = Borneo (including Sabah & Sarawak of East Malaysia, Brunei and Kalimantan Indonesia), TH = Thailand, LA = Laos, SM = Sumatera Indonesia, CH = China, CM = Cambodia. https://doi.org/10.1371/journal.pone.0179555.g004" figureDoi="http://doi.org/10.5281/zenodo.4251362" httpUri="https://zenodo.org/record/4251362/files/figure.png" pageId="23" pageNumber="24">Fig 4</figureCitation>
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)
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</paragraph>
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</subSubSection>
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<subSubSection pageId="23" pageNumber="24" type="discussion">
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<paragraph blockId="23.[533,1536,554,1098]" pageId="23" pageNumber="24">
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<emphasis bold="true" box="[565,669,762,786]" pageId="23" pageNumber="24">Remarks:</emphasis>
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Murray et al. [
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<bibRefCitation author="Murray SW & Campbell P & Kingston T & Zubaid A & Francis CM & Kunz TH" box="[827,865,762,786]" journalOrPublisher="Mol Phylogenet Evol." pageId="23" pageNumber="24" pagination="597 - 611" part="62" refId="ref43062" refString="125. Murray SW, Campbell P, Kingston T, Zubaid A, Francis CM, Kunz TH. Molecular phylogeny of hipposiderid bats from Southeast Asia and evidence of cryptic diversity. Mol Phylogenet Evol. 2012; 62 (2): 597 - 611. https: // doi. org / 10.1016 / j. ympev. 2011.10.021 PMID: 22079552" title="Molecular phylogeny of hipposiderid bats from Southeast Asia and evidence of cryptic diversity" type="journal article" year="2012">125</bibRefCitation>
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] found little divergence in ND2 and RAG1 mtDNA (
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<emphasis box="[1431,1452,762,786]" italics="true" pageId="23" pageNumber="24"><</emphasis>
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1%) between “
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<emphasis box="[638,750,797,821]" italics="true" pageId="23" pageNumber="24">
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<taxonomicName authority="in Peninsular" authorityName="Thomas" authorityYear="1902" box="[638,743,797,821]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="23" pageNumber="24" phylum="Chordata" rank="species" species="dyacorum">dyacorum</taxonomicName>
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”
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</emphasis>
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in Peninsular
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<collectingCountry box="[905,999,797,821]" name="Malaysia" pageId="23" pageNumber="24">Malaysia</collectingCountry>
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and East
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<collectingCountry box="[1101,1197,797,821]" name="Malaysia" pageId="23" pageNumber="24">Malaysia</collectingCountry>
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, Borneo. However, our NJ analysis showed
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<emphasis box="[664,685,832,856]" italics="true" pageId="23" pageNumber="24">></emphasis>
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2% divergence between DNA barcodes from Peninsular
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<collectingCountry box="[1282,1376,832,856]" name="Malaysia" pageId="23" pageNumber="24">Malaysia</collectingCountry>
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and
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<collectingRegion box="[1428,1493,832,856]" country="Malaysia" name="Sabah" pageId="23" pageNumber="24">Sabah</collectingRegion>
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, Borneo (
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<figureCitation box="[626,679,866,890]" captionStart="Fig 4" captionStartId="18.[500,532,1848,1867]" captionTargetBox="[500,1536,208,1832]" captionTargetId="figure-1@18.[500,1536,208,1832]" captionTargetPageId="18" captionText="Fig 4. Neighbour-joining tree showing all available DNA barcodes for species in family Hipposideridae reported from Peninsular Malaysia. The percentage of pseudoreplicate trees (±70%) in which the DNA barcodes clustered together in the bootstrap test (500 pseudoreplicates) are shown above the branches. Abbreviation as follows: PM = Peninsular Malaysia,VN = Vietnam, BN = Borneo (including Sabah & Sarawak of East Malaysia, Brunei and Kalimantan Indonesia), TH = Thailand, LA = Laos, SM = Sumatera Indonesia, CH = China, CM = Cambodia. https://doi.org/10.1371/journal.pone.0179555.g004" figureDoi="http://doi.org/10.5281/zenodo.4251362" httpUri="https://zenodo.org/record/4251362/files/figure.png" pageId="23" pageNumber="24">Fig 4</figureCitation>
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). We tentatively retained the name
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<taxonomicName authorityName="Thomas" authorityYear="1902" box="[1056,1192,866,890]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="23" pageNumber="24" phylum="Chordata" rank="species" species="dyacorum">
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<emphasis box="[1056,1076,867,890]" italics="true" pageId="23" pageNumber="24">H</emphasis>
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.
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<emphasis box="[1088,1192,866,890]" italics="true" pageId="23" pageNumber="24">dyacorum</emphasis>
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</taxonomicName>
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in our checklist pending further research into these taxa.
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</paragraph>
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<paragraph blockId="23.[533,1536,554,1098]" box="[565,870,936,960]" pageId="23" pageNumber="24">
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<emphasis bold="true" box="[565,710,936,960]" pageId="23" pageNumber="24">IUCN status:</emphasis>
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Least Concern
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</paragraph>
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</subSubSection>
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<subSubSection pageId="23" pageNumber="24" type="distribution">
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<paragraph blockId="23.[533,1536,554,1098]" pageId="23" pageNumber="24">
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<emphasis bold="true" box="[565,794,970,994]" pageId="23" pageNumber="24">Recorded at: Pahang</emphasis>
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: Krau Wildlife Reserve [
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<bibRefCitation author="Khan FAA & Vicki J & Solari S & Peter A & Ketol B & Marni W" box="[1054,1079,970,994]" journalOrPublisher="Number 281" pageId="23" pageNumber="24" refId="ref39144" refString="32. Khan FAA, Vicki J, Solari S, Peter A, Ketol B, Marni W, et al. Using genetics and morphology to examine species diversity of Old World bats: report of a recent collection from Malaysia. Occas Pap Tex Tech Univ Mus. 2008; Number 281." title="Using genetics and morphology to examine species diversity of Old World bats: report of a recent collection from Malaysia. Occas Pap Tex Tech Univ Mus" type="book" year="2008">32</bibRefCitation>
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], Kenong [
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<bibRefCitation author="Lim LS & Mohd-Adnan A & Zubaid A & Struebig MJ & Rossiter SJ" box="[1200,1238,970,994]" journalOrPublisher="J Trop Ecol." pageId="23" pageNumber="24" pagination="111 - 121" part="30" refId="ref42115" refString="100. Lim LS, Mohd-Adnan A, Zubaid A, Struebig MJ, Rossiter SJ. Diversity of Malaysian insectivorous bat assemblages revisited. J Trop Ecol. 2014; 30 (02): 111 - 121." title="Diversity of Malaysian insectivorous bat assemblages revisited" type="journal article" year="2014">100</bibRefCitation>
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];
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<emphasis bold="true" box="[1259,1322,970,994]" pageId="23" pageNumber="24">Perlis</emphasis>
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: Wang Kelian State Park [
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<bibRefCitation author="Jayaraj VK & Daud SH & Azhar MI & Sah SA & Mokhtar SI & Abdullah MT" box="[598,623,1005,1029]" journalOrPublisher="Check List." pageId="23" pageNumber="24" pagination="1439 - 48" part="9" refId="ref39984" refString="50. Jayaraj VK, Daud SH, Azhar MI, Sah SA, Mokhtar SI, Abdullah MT. Diversity and conservation status of mammals in Wang Kelian State Park, Perlis, Malaysia. Check List. 2013; 9 (6): 1439 - 48." title="Diversity and conservation status of mammals in Wang Kelian State Park, Perlis, Malaysia" type="journal article" year="2013">50</bibRefCitation>
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], Gua Tekong
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<collectingCountry box="[782,835,1005,1029]" name="Thailand" pageId="23" pageNumber="24">Siam</collectingCountry>
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[
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<bibRefCitation author="Hill JE & Zubaid A. The" box="[850,888,1005,1029]" journalOrPublisher="Mammalia." pageId="23" pageNumber="24" pagination="307 - 308" part="53" refId="ref43327" refString="132. Hill JE, Zubaid A. The Dyak leaf-nosed bat, Hipposideros dyacorum Thomas, 1902 (Chiroptera: Hipposideridae) in Peninsular Malaysia. Mammalia. 1989; 53 (2): 307 - 308." title="Dyak leaf-nosed bat, Hipposideros dyacorum Thomas, 1902 (Chiroptera: Hipposideridae) in Peninsular Malaysia" type="journal article" year="1989">132</bibRefCitation>
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];
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<emphasis bold="true" box="[909,973,1005,1029]" pageId="23" pageNumber="24">Perak</emphasis>
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: Temenggor Lake [
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<bibRefCitation author="Syaripuddin K & Kumar A & Sing KW & Halim MR & Nursyereen MN & Wilson JJ" box="[1180,1205,1005,1029]" journalOrPublisher="Ecotoxicology." pageId="23" pageNumber="24" pagination="1164 - 1171" part="23" refId="ref40984" refString="69. Syaripuddin K, Kumar A, Sing KW, Halim MR, Nursyereen MN, Wilson JJ. Mercury accumulation in bats near hydroelectric reservoirs in Peninsular Malaysia. Ecotoxicology. 2014; 23 (7): 1164 - 1171. https: // doi. org / 10.1007 / s 10646 - 014 - 1258 - y PMID: 24840106" title="Mercury accumulation in bats near hydroelectric reservoirs in Peninsular Malaysia" type="journal article" year="2014">69</bibRefCitation>
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];
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<emphasis bold="true" box="[1227,1361,1005,1029]" pageId="23" pageNumber="24">Terengganu</emphasis>
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: Tasik Kenyir [
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<bibRefCitation author="Syaripuddin K & Kumar A & Sing KW & Halim MR & Nursyereen MN & Wilson JJ" box="[542,567,1040,1064]" journalOrPublisher="Ecotoxicology." pageId="23" pageNumber="24" pagination="1164 - 1171" part="23" refId="ref40984" refString="69. Syaripuddin K, Kumar A, Sing KW, Halim MR, Nursyereen MN, Wilson JJ. Mercury accumulation in bats near hydroelectric reservoirs in Peninsular Malaysia. Ecotoxicology. 2014; 23 (7): 1164 - 1171. https: // doi. org / 10.1007 / s 10646 - 014 - 1258 - y PMID: 24840106" title="Mercury accumulation in bats near hydroelectric reservoirs in Peninsular Malaysia" type="journal article" year="2014">69</bibRefCitation>
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];
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<emphasis bold="true" box="[589,690,1040,1064]" pageId="23" pageNumber="24">Kelantan</emphasis>
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: Gunung Stong State Park [
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<bibRefCitation author="Lim LS & Mohd-Adnan A & Zubaid A & Struebig MJ & Rossiter SJ" box="[986,1024,1040,1064]" journalOrPublisher="J Trop Ecol." pageId="23" pageNumber="24" pagination="111 - 121" part="30" refId="ref42115" refString="100. Lim LS, Mohd-Adnan A, Zubaid A, Struebig MJ, Rossiter SJ. Diversity of Malaysian insectivorous bat assemblages revisited. J Trop Ecol. 2014; 30 (02): 111 - 121." title="Diversity of Malaysian insectivorous bat assemblages revisited" type="journal article" year="2014">100</bibRefCitation>
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], Gua Musang (ABBSI020-04).
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</paragraph>
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</subSubSection>
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<subSubSection box="[565,1483,1074,1098]" pageId="23" pageNumber="24" type="discussion">
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<paragraph blockId="23.[533,1536,554,1098]" box="[565,1483,1074,1098]" pageId="23" pageNumber="24">
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<taxonomicName authorityName="Thomas" authorityYear="1902" box="[565,701,1074,1098]" class="Mammalia" family="Hipposideridae" genus="Hipposideros" kingdom="Animalia" order="Chiroptera" pageId="23" pageNumber="24" phylum="Chordata" rank="species" species="dyacorum">
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<emphasis box="[565,585,1075,1098]" italics="true" pageId="23" pageNumber="24">H</emphasis>
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.
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<emphasis box="[597,701,1074,1098]" italics="true" pageId="23" pageNumber="24">dyacorum</emphasis>
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</taxonomicName>
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has been reported roosting in caves, under rocks and in tree hollows [
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<bibRefCitation author="Francis CM" box="[1443,1468,1074,1098]" journalOrPublisher="New Holland Publishers" pageId="23" pageNumber="24" refId="ref38235" refString="14. Francis CM. A field guide to the mammals of South-East Asia. New Holland Publishers; 2008." title="A field guide to the mammals of South-East Asia" type="book" year="2008">14</bibRefCitation>
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].
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |