261 lines
23 KiB
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261 lines
23 KiB
XML
<document id="06ECBF84CB4B0E9EF8C0CA63C30F28B3" ID-DOI="10.1099/ijsem.0.004107" ID-ISSN="1466-5034" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644597203828" checkinUser="felipe" docAuthor="Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O’Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah" docDate="2020" docId="0389878AFFA0215CD94EFA17FA8F63DD" docLanguage="en" docName="IntJSystEvolMicrobiol.70.4.2782-2858.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70 (4)" docSource="http://dx.doi.org/10.1099/ijsem.0.004107" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Lactiplantibacillus paraplantarum Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020, COMB. NOV." docType="treatment" docVersion="4" lastPageNumber="2827" masterDocId="FFB0FFF2FF8D2171D937FF96FFAF6267" masterDocTitle="A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae" masterLastPageNumber="2858" masterPageNumber="2782" pageNumber="2827" updateTime="1699295455673" updateUser="plazi">
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<mods:title id="4F272D8DADDF442777021AD77AFAE587">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="4404BD06148020A816CB8E2AA0999ED7">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="7E4D08C0570C825E07FF3C6D9D7F84FC">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="9616E3EFB6C1CC265E386039EDFCCABA">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="C5365786198E5366196C8FACFF8BC7C3">Franz, Charles M. A. P.</mods:namePart>
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<mods:namePart id="F2D0548DD6610AF7278BFA5E30442844">Harris, Hugh M. B.</mods:namePart>
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<mods:namePart id="A7D19B7F127EEB13DF232C616F51A971">Mattarelli, Paola</mods:namePart>
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<mods:namePart id="6C7558A52FCE96387301D635FE5EE30B">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="0EC6F568CC33BB18DED519C6D40C9DED">Pot, Bruno</mods:namePart>
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<mods:namePart id="52219EB6D1D8B380CCD2DC651F5F3794">Vandamme, Peter</mods:namePart>
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<mods:namePart id="87B300541885E042F44F9DC26C3892AB">Walter, Jens</mods:namePart>
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<mods:namePart id="9002B53B17F04220716F53E5E8BE1493">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="C56AECF12B0ECFB795B9CC2A4BD72FEF">Wuyts, Sander</mods:namePart>
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<mods:namePart id="4FA1C5E4E4660867B1C41139DC97FC2D">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="6036DCC5F365443C57D456011AB05A0E">Gänzle, Michael G.</mods:namePart>
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<mods:namePart id="D81990DE1AAC40DD9779E5B087E92534">Lebeer, Sarah</mods:namePart>
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<mods:title id="D6167D70B7646B6FB23A98B4128BF2A9">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:date id="B05C2EF2ED3C2BEFE8F59B4EB89B088A">2020</mods:date>
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<mods:number id="AE5DA80C59916785C92E4EA9A0D8DC6B">2020-04-01</mods:number>
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<treatment id="0389878AFFA0215CD94EFA17FA8F63DD" ID-DOI="http://doi.org/10.5281/zenodo.6309904" ID-Zenodo-Dep="6309904" LSID="urn:lsid:plazi:treatment:0389878AFFA0215CD94EFA17FA8F63DD" httpUri="http://treatment.plazi.org/id/0389878AFFA0215CD94EFA17FA8F63DD" lastPageNumber="2827" pageId="45" pageNumber="2827">
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<subSubSection id="C33A6517FFA0215CD94EFA17FD8C67A4" pageId="45" pageNumber="2827" type="nomenclature">
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<paragraph id="8B9F369CFFA0215CD94EFA17FD8C67A4" blockId="45.[120,766,1409,1956]" pageId="45" pageNumber="2827">
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<heading id="D0D781F0FFA0215CD94EFA17FD8C67A4" allCaps="true" bold="true" fontSize="12" level="2" pageId="45" pageNumber="2827" reason="3">
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<emphasis id="B954EA8EFFA0215CD94EFA17FD8C67A4" bold="true" pageId="45" pageNumber="2827">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFFA0215CD845FA17FED967A4" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Lactiplantibacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="45" pageNumber="2827" phylum="Firmicutes" rank="species" species="paraplantarum" status="comb. nov.">
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<emphasis id="B954EA8EFFA0215CD845FA17FED967A4" bold="true" italics="true" pageId="45" pageNumber="2827">LACTIPLANTIBACILLUS PARAPLANTARUM</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A26757F5FFA0215CD849FA30FD8C67A4" box="[382,547,1446,1475]" pageId="45" pageNumber="2827" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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<subSubSection id="C33A6517FFA0215CD94EFA46FD756442" pageId="45" pageNumber="2827" type="etymology">
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<paragraph id="8B9F369CFFA0215CD94EFA46FD756442" blockId="45.[120,766,1409,1956]" pageId="45" pageNumber="2827">
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<taxonomicName id="4C204D1FFFA0215CD94EFA46FE7B678F" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[121,468,1488,1512]" class="Bacilli" family="Lactobacillaceae" genus="Lactiplantibacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="45" pageNumber="2827" phylum="Firmicutes" rank="species" species="paraplantarum">
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<emphasis id="B954EA8EFFA0215CD94EFA46FE7B678F" box="[121,468,1488,1512]" italics="true" pageId="45" pageNumber="2827">Lactiplantibacillus paraplantarum</emphasis>
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</taxonomicName>
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(pa.ra.plan.tar’um. Gr. prep.
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<emphasis id="B954EA8EFFA0215CD94EFA79FF066461" box="[121,169,1519,1542]" italics="true" pageId="45" pageNumber="2827">para</emphasis>
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resembling; N.L. gen. n.
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<taxonomicName id="4C204D1FFFA0215CD8F7FA79FD9F6460" authorityName="Bergey et al." authorityYear="1923" baseAuthorityName="Orla-Jensen" baseAuthorityYear="1919" box="[448,560,1519,1543]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="45" pageNumber="2827" phylum="Firmicutes" rank="species" species="plantarum">
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<emphasis id="B954EA8EFFA0215CD8F7FA79FD9F6460" box="[448,560,1519,1543]" italics="true" pageId="45" pageNumber="2827">plantarum</emphasis>
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</taxonomicName>
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, a species epithet; N.L. gen. pl. n.
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<taxonomicName id="4C204D1FFFA0215CD82AF99BFE166442" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[285,441,1549,1573]" class="Bacilli" family="Lactobacillaceae" genus="Lactiplantibacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="45" pageNumber="2827" phylum="Firmicutes" rank="species" species="paraplantarum">
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<emphasis id="B954EA8EFFA0215CD82AF99BFE166442" box="[285,441,1549,1573]" italics="true" pageId="45" pageNumber="2827">paraplantarum</emphasis>
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</taxonomicName>
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, resembling
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<taxonomicName id="4C204D1FFFA0215CDB76F998FD646442" authorityName="Bergey et al." authorityYear="1923" baseAuthorityName="Orla-Jensen" baseAuthorityYear="1919" box="[577,715,1549,1573]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="45" pageNumber="2827" phylum="Firmicutes" rank="species" species="plantarum">
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<emphasis id="B954EA8EFFA0215CDB76F998FD646442" box="[577,715,1549,1573]" italics="true" pageId="45" pageNumber="2827">L. plantarum</emphasis>
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</taxonomicName>
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).
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFA0215CD94EF9AAFBA56289" pageId="45" pageNumber="2827" type="description">
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<paragraph id="8B9F369CFFA0215CD94EF9AAFD58642F" blockId="45.[120,766,1409,1956]" box="[121,759,1594,1620]" pageId="45" pageNumber="2827">
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Basonym:
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<taxonomicName id="4C204D1FFFA0215CD9D2F9ADFD196434" authority="Curk et al. 1996" authorityName="Curk" authorityYear="1996" box="[229,694,1595,1619]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="45" pageNumber="2827" phylum="Firmicutes" rank="species" species="paraplantarum">
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||
<emphasis id="B954EA8EFFA0215CD9D2F9ADFDA26434" box="[229,525,1595,1619]" italics="true" pageId="45" pageNumber="2827">Lactobacillus paraplantarum</emphasis>
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||
Curk
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<emphasis id="B954EA8EFFA0215CDB7BF9AAFDD96434" box="[588,630,1595,1619]" italics="true" pageId="45" pageNumber="2827">et al</emphasis>
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||
. 1996
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</taxonomicName>
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, 598
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<superScript id="7C559BD4FFA0215CDBD3F9ACFD58642F" attach="none" box="[740,759,1594,1608]" fontSize="6" pageId="45" pageNumber="2827">VP</superScript>
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</paragraph>
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<paragraph id="8B9F369CFFA0215CD94EF9FFFEB2649B" blockId="45.[120,766,1409,1956]" pageId="45" pageNumber="2827">
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The cells are non-motile rods, usually singly, in pairs and sometimes in short chains. They grow at pH 5 and 7 and they tolerate NaCl up to a concentration of 8 % [
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<bibRefCitation id="EFB14B6DFFA0215CDB0EF930FDC864D9" author="Curk M-C & Hubert J-C & Bringel F." box="[569,615,1702,1726]" pageId="45" pageNumber="2827" pagination="595 - 598" refId="ref70279" refString="237. Curk M-C, Hubert J-C, Bringel F. Lactobacillus paraplantarum sp. nov., a new species related to Lactobacillus plantarum. Int J Syst Bacteriol 1996; 46: 595 - 598." type="journal article" year="1996">237</bibRefCitation>
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]. The genome size of the
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<typeStatus id="549B883EFFA0215CD9DAF953FEB464BA" box="[237,283,1733,1757]" pageId="45" pageNumber="2827">type</typeStatus>
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strain is 3.40 Mbp. The mol% G+C content of DNA is 43.7.
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</paragraph>
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<paragraph id="8B9F369CFFA0215CD94EF887FBA56289" blockId="45.[120,766,1409,1956]" lastBlockId="45.[826,1467,183,443]" pageId="45" pageNumber="2827">
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Isolated as spoilage organisms from beer and from human faeces. They are also found in grape marmalade, dairy products,
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<emphasis id="B954EA8EFFA0215CD985F8D9FEAF6501" box="[178,256,1871,1894]" italics="true" pageId="45" pageNumber="2827">jangajji</emphasis>
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||
(a Korean fermented food), fermented vegetables, fermented fruits, fermented dates, rice bran pickles, silage, cocoa beans, fermented sourdough, fermented slurry, faecal microbiota of healthy dogs, traditional fura processing, wine and sow milk.
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</paragraph>
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</subSubSection>
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<materialsCitation id="3B483CC1FFA0215CDA0BFE93FAD4633B" accessionNumber="CST 10961, DSM 10667, JCM 12533, LMG 16673" collectionCode="T, DSM, JCM, LMG, NRRL" pageId="45" pageNumber="2827" specimenCode="ATCC 700211, CCUG 35983, CIP 104668, CNRZ 1885" specimenCount="1" typeStatus="holotype">
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The
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<typeStatus id="549B883EFFA0215CDA58FE90FC316379" box="[879,926,262,286]" pageId="45" pageNumber="2827">type</typeStatus>
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strain is CST 10961
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=
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<specimenCode id="DB869EE7FFA0215CDD81FE93FAFA637A" box="[1206,1365,261,285]" collectionCode="ATCC" country="USA" httpUri="http://grbio.org/cool/b0k1-wg01" name="American Type Culture Collection" pageId="45" pageNumber="2827">ATCC 700211</specimenCode>
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=
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<specimenCode id="DB869EE7FFA0215CDC5AFE93FCD3635A" collectionCode="CCUG" country="Sweden" httpUri="http://grbio.org/cool/td22-j49f" name="Culture Collection, University of Goteborg, Department of Clinical Bacteriology" pageId="45" pageNumber="2827">CCUG 35983</specimenCode>
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=
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<specimenCode id="DB869EE7FFA0215CDA96FEB3FBB1635A" box="[929,1054,293,317]" collectionCode="CIP" country="Colombia" httpUri="http://grbio.org/cool/kny8-abms" name="Centro de Investigaciones Pesqueras" pageId="45" pageNumber="2827">CIP 104668</specimenCode>
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=
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<specimenCode id="DB869EE7FFA0215CDD73FEB3FB6C635A" box="[1092,1219,293,317]" collectionCode="CNRZ" country="France" httpUri="http://grbio.org/cool/zkkf-z1kp" name="Centre National de Recherches Zootechniques" pageId="45" pageNumber="2827">CNRZ 1885</specimenCode>
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= CST 10961
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=
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<collectionCode id="ED31AE59FFA0215CDCB4FEB3FA14635A" box="[1411,1467,293,317]" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="45" pageNumber="2827">DSM</collectionCode>
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10667
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</superScript>
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=
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<collectionCode id="ED31AE59FFA0215CDAA4FED3FC68633A" box="[915,967,325,349]" country="Japan" httpUri="http://grbio.org/cool/iyky-md37" name="Japan Collection of Microorganisms" pageId="45" pageNumber="2827">JCM</collectionCode>
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12533
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=
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<collectionCode id="ED31AE59FFA0215CDD05FED3FBC4633A" box="[1074,1131,325,349]" country="Belgium" httpUri="http://grbio.org/cool/0fkg-rcci" name="Belgian Coordinated Collections of Microorganisms/ LMG Bacteria Collection" pageId="45" pageNumber="2827">LMG</collectionCode>
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16673
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=
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<collectionCode id="ED31AE59FFA0215CDDFFFED3FAA2633B" box="[1224,1293,325,348]" pageId="45" pageNumber="2827">NRRL</collectionCode>
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B-23115
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.
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</materialsCitation>
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFA0215CDA0BFEE2FA2C63EB" box="[828,1411,371,396]" pageId="45" pageNumber="2827" type="description">
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<paragraph id="8B9F369CFFA0215CDA0BFEE2FA2C63EB" blockId="45.[826,1467,183,443]" box="[828,1411,371,396]" pageId="45" pageNumber="2827">Genome sequence accession number: AZEO00000000.</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFA0215CDA0BFE34FA8F63DD" box="[828,1312,418,443]" pageId="45" pageNumber="2827" type="materials_examined">
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<paragraph id="8B9F369CFFA0215CDA0BFE34FA8F63DD" blockId="45.[826,1467,183,443]" box="[828,1312,418,443]" pageId="45" pageNumber="2827">
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16S rRNA gene accession number:
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<accessionNumber id="9473AB7FFFA0215CDD86FE34FAB363DD" box="[1201,1308,418,442]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AJ306297" pageId="45" pageNumber="2827">
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<collectionCode id="ED31AE59FFA0215CDD86FE34FB6163DD" box="[1201,1230,418,442]" country="Japan" name="Central Research Laboratories" pageId="45" pageNumber="2827">AJ</collectionCode>
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306297
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</accessionNumber>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |