127 lines
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127 lines
12 KiB
XML
<document id="A990523C03F2BF00A987CD122462DC14" ID-DOI="10.12651/JSR.2018.7.2.161" ID-ISSN="2713-8615" ID-Zenodo-Dep="13163061" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1722569917448" checkinUser="felipe" docAuthor="Kim, Ju-Young, Jang, Jun Hwee, Maeng, Soohyun & Kim, Myung-Suk Kang and Myung Kyum" docDate="2018" docId="920D4B0AFF9EDA40FF67E273FB93FC68" docLanguage="en" docName="JSpeciesRes.7.2.161-180.pdf" docOrigin="Journal of Species Research 7 (2)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.2:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="2" docTitle="Deinococcus proteolyticus Strain" docType="treatment" docVersion="2" lastPageNumber="176" masterDocId="6E343372FF91DA4FFFF7E75DFFC0FF8A" masterDocTitle="A report of 14 unrecorded bacterial species in Korea isolated in 2017" masterLastPageNumber="180" masterPageNumber="161" pageNumber="176" updateTime="1722576625367" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:mods id="D50228F4CEB07149B9845C4237E1187E" xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo id="45619C2F1C636D0A801189188CC8DAAC">
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<mods:title id="03038525519B4E92F589A71AEF203597">A report of 14 unrecorded bacterial species in Korea isolated in 2017</mods:title>
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<mods:name id="B77F4345BF12D5D486027580A195FCD3" type="personal">
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<mods:roleTerm id="B12DAE9D2AFA9AE71307E50280D8BEB1">Author</mods:roleTerm>
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<mods:namePart id="FCF07A18BF183A3C2F281CAA212CCBC8">Kim, Ju-Young</mods:namePart>
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<mods:affiliation id="1619596AB71B8C7B41C2FF1870C432CF">Department of Bio & Environmental Technology, College of Natural Science, Seoul Women’s University, Seoul 01797, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:roleTerm id="201CE390278A520309976BB59DDE2267">Author</mods:roleTerm>
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<mods:namePart id="2EB33C6A72FCD2380A19E13D2C660573">Jang, Jun Hwee</mods:namePart>
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<mods:affiliation id="8AA86BFB436FFABE21A4598A72766210">Department of Bio & Environmental Technology, College of Natural Science, Seoul Women’s University, Seoul 01797, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="C4BFE950D597C67942FE554E27DAC3C9" type="personal">
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<mods:roleTerm id="5DB9B279AE442867590B07692BDFE515">Author</mods:roleTerm>
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<mods:namePart id="CB4CF92722584349F482ACDB368DAAF9">Maeng, Soohyun</mods:namePart>
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<mods:affiliation id="A324B5A62B5024D5198F18758D3783E1">Department of Public Health Sciences, Graduate School, Korea University, Seoul 02841, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="CE5E01EAB5B80C48BC0D426C298114DD" type="personal">
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<mods:roleTerm id="DA95356C0FEEF75B1F152B3FB77C4F00">Author</mods:roleTerm>
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<mods:namePart id="6AC74376487B27214A5518BF4030D526">Kim, Myung-Suk Kang and Myung Kyum</mods:namePart>
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<mods:typeOfResource id="3162347D8E764906D52ED20B31487CAF">text</mods:typeOfResource>
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<mods:title id="35F558B13A4F52BB3850A12DCBA55B17">Journal of Species Research</mods:title>
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<mods:part id="4E24D4CC53704A52D839D222F0E16C18">
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<mods:date id="0F97E4D6B665C7FCF0D6261BF4D1CA8A">2018</mods:date>
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<mods:detail id="B8AEF14A73AB9D2DB9687FBDE08BF89F" type="volume">
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<mods:number id="E53297F0105CC001193BFF350989E6B7">7</mods:number>
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<mods:number id="970C908D2FA3370291AB10D7E0E29C43">2</mods:number>
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<mods:start id="D9CD1C9F1668CB9587427792D8E4C16C">161</mods:start>
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<mods:end id="7EFB71DC8546D72DA362203DE27E41E5">180</mods:end>
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<mods:classification id="D405D77495C5B23D1D270C4A466F60C8">journal article</mods:classification>
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<mods:identifier id="5567998D1E36AE2AB51BBF3A305D32EA" type="DOI">10.12651/JSR.2018.7.2.161</mods:identifier>
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<mods:identifier id="61717423A753EC8FD3AE6807FCD86CD4" type="ISSN">2713-8615</mods:identifier>
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<mods:identifier id="2B254A2506D8D1DAD32577C4413F346D" type="Zenodo-Dep">13163061</mods:identifier>
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<treatment id="920D4B0AFF9EDA40FF67E273FB93FC68" ID-DOI="http://doi.org/10.5281/zenodo.13163098" ID-Zenodo-Dep="13163098" LSID="urn:lsid:plazi:treatment:920D4B0AFF9EDA40FF67E273FB93FC68" httpUri="http://treatment.plazi.org/id/920D4B0AFF9EDA40FF67E273FB93FC68" lastPageNumber="176" pageId="15" pageNumber="176">
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<subSubSection id="52BEA997FF9EDA40FF67E273FB10FD2A" pageId="15" pageNumber="176" type="nomenclature">
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<paragraph id="1A1BFA1CFF9EDA40FF67E273FD72FACC" blockId="15.[144,690,1325,1350]" box="[144,690,1325,1350]" pageId="15" pageNumber="176">
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<heading id="41534D70FF9EDA40FF67E273FD72FACC" box="[144,690,1325,1350]" fontSize="10" level="2" pageId="15" pageNumber="176" reason="5">
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<emphasis id="28D0260EFF9EDA40FF67E273FD72FACC" bold="true" box="[144,690,1325,1350]" pageId="15" pageNumber="176">
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Description of
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<taxonomicName id="DDA4819FFF9EDA40FEC0E273FD66FACC" authority="Strain" authorityName="Strain" box="[311,678,1325,1350]" class="Actinobacteridae" family="Micrococcaceae" genus="Deinococcus" kingdom="Bacteria" order="Actinomycetales" pageId="15" pageNumber="176" phylum="Actinobacteria" rank="species" species="proteolyticus">
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<emphasis id="28D0260EFF9EDA40FEC0E273FD97FACF" bold="true" box="[311,599,1325,1350]" italics="true" pageId="15" pageNumber="176">Deinococcus proteolyticus</emphasis>
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Strain
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</taxonomicName>
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8
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</emphasis>
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</heading>
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</paragraph>
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<paragraph id="1A1BFA1CFF9EDA40FF51E202FB10FD2A" blockId="15.[144,749,1375,1980]" lastBlockId="15.[809,1414,261,995]" pageId="15" pageNumber="176">
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Cells are Gram-stain-positive and cocci-shaped. Colonies are orange-colored after 3 days of incubation on R2A at 25°C. In the BIOLOG GEN III, sucrose, inosine, D-fructose,
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<emphasis id="28D0260EFF9EDA40FEE2E29DFEE5FA5D" box="[277,293,1472,1495]" italics="true" pageId="15" pageNumber="176">α</emphasis>
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-D-glucose, D-mannitol, L-histidine, and tween 40 are utilized as sole carbon source. But D-trehalose, D-cellobiose, gentiobiose, stachyose, D-raffinose, D-galactose, D-sorbitol, glycerol, D-serine, L-alanine, L-arginine, L-aspartic acid, L-serine, D-gluconic acid, D-glucuronic acid, glucuronamide, propionic acidacetoacetic acid,
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<emphasis id="28D0260EFF9EDA40FEE1E1DFFEE8F913" box="[278,296,1666,1689]" italics="true" pageId="15" pageNumber="176">N</emphasis>
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-acetyl-D-mannosamine, dextrin, D-fructose 6-PO
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<subScript id="8620F859FF9EDA40FEF7E1F4FEC9F930" attach="right" box="[256,265,1705,1722]" fontSize="7" pageId="15" pageNumber="176">4</subScript>
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, L-galactonic acid lactone, D-galacturonic acid, gelatin, L-glutamic acid,
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<emphasis id="28D0260EFF9EDA40FE10E19FFE37F953" box="[487,503,1730,1753]" italics="true" pageId="15" pageNumber="176">α</emphasis>
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-keto-glutaric acid, Lmalic acid, D-maltose, D-mannose, D-melibiose,
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<emphasis id="28D0260EFF9EDA40FD23E1BFFD23F970" box="[724,739,1762,1786]" italics="true" pageId="15" pageNumber="176">β</emphasis>
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- methyl-D-glucoside, 3-methyl glucose, myo-inositol, pectin, glycyl-L-proline, L-pyroglutamic acid, quinic acid, L-rhamnose, D-turanose acetic acid,
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<emphasis id="28D0260EFF9EDA40FD9DE019FDBCF8D1" box="[618,636,1860,1883]" italics="true" pageId="15" pageNumber="176">N</emphasis>
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-acetyl-D-galactosamine,
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<emphasis id="28D0260EFF9EDA40FEC9E039FE90F8F1" box="[318,336,1892,1915]" italics="true" pageId="15" pageNumber="176">N</emphasis>
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-acetyl-neuraminic acid,
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<emphasis id="28D0260EFF9EDA40FD9EE039FDBBF8F1" box="[617,635,1892,1915]" italics="true" pageId="15" pageNumber="176">N</emphasis>
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-acetyl-D-glucosamine,
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<emphasis id="28D0260EFF9EDA40FED5E0D9FEF1F811" box="[290,305,1924,1947]" italics="true" pageId="15" pageNumber="176">γ</emphasis>
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-amino-butryric acid, D-arabitol, D-aspartic acid, bromo-succinic acid, citric acid, formic acid, D-fucose, L-fucose, D-glucose-6-PO
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<subScript id="8620F859FF9EDA40FB45E650FB7BFE94" attach="left" box="[1202,1211,269,286]" fontSize="7" pageId="15" pageNumber="176">4</subScript>
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,
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<emphasis id="28D0260EFF9EDA40FB3FE65BFB18FE97" box="[1224,1240,262,285]" italics="true" pageId="15" pageNumber="176">α</emphasis>
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-hydroxybutyric acid,
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<emphasis id="28D0260EFF9EDA40FC9FE678FCB7FEB7" box="[872,887,293,317]" italics="true" pageId="15" pageNumber="176">β</emphasis>
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-hydroxy-D,L-butyric acid,
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<emphasis id="28D0260EFF9EDA40FB43E67BFB01FEB7" box="[1204,1217,294,317]" italics="true" pageId="15" pageNumber="176">p</emphasis>
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-hydroxy-phenylacetic acid,
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<emphasis id="28D0260EFF9EDA40FC58E61BFC7FFED7" box="[943,959,326,349]" italics="true" pageId="15" pageNumber="176">α</emphasis>
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-keto-butyric acid, L-lactic acid, D-lactic acid methyl ester,
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<emphasis id="28D0260EFF9EDA40FC0AE63BFBCDFEF7" box="[1021,1037,358,381]" italics="true" pageId="15" pageNumber="176">α</emphasis>
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-D-lactose, D-malic acid, methyl pyruvate, mucic acid, D-saccharic acid, and D-salicin are not utilized. In sensitivity tests, the tetrazolium redox dye was reduced in the presence of 1% NaCl, 1% sodium lactate, lithium chloride, pH 6, nalidixic acid, and rifamycin SV but not potassium tellurite, aztreonam, 4% NaCl, 8% NaCl, guanidine HCl, D-serine, sodium butyrate, tetrazolium violet fusidic acid, lincomycin, minocycline, niaproof 4, pH 5, sodium bromate, tetrazolium blue, troleandomycin, and vancomycin.
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</paragraph>
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</subSubSection>
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<subSubSection id="52BEA997FF9EDA40FCC8E5F4FB93FC68" pageId="15" pageNumber="176" type="description">
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<paragraph id="1A1BFA1CFF9EDA40FCC8E5F4FB11FC28" blockId="15.[809,1414,261,995]" pageId="15" pageNumber="176">
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In the API 20NE, positive for reduction of nitrates (NO
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<subScript id="8620F859FF9EDA40FCAFE58CFCA1FD68" attach="left" box="[856,865,721,738]" fontSize="7" pageId="15" pageNumber="176">3</subScript>
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) to nitrite (NO
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<subScript id="8620F859FF9EDA40FBF7E58CFBC9FD68" attach="left" box="[1024,1033,721,738]" fontSize="7" pageId="15" pageNumber="176">2</subScript>
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<superScript id="EDD15754FF9EDA40FBFEE59AFBD3FD5E" attach="right" box="[1033,1043,711,724]" fontSize="7" pageId="15" pageNumber="176">-</superScript>
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), arginine dihydrolase, D-glucose, and esculin hydrolysis. Negative for indole production on tryptophan, glucose fermentation, gelatin hydrolysis,
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<emphasis id="28D0260EFF9EDA40FCDEE477FCF8FCC8" box="[809,824,810,834]" italics="true" pageId="15" pageNumber="176">β</emphasis>
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-galactosidase, D-mannitol,
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<emphasis id="28D0260EFF9EDA40FB85E477FB44FCCB" box="[1138,1156,810,833]" italics="true" pageId="15" pageNumber="176">N</emphasis>
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-acetyl-D-glucosamine, urease, D-mannose, D-maltose, potassium gluconate, capric acid, adipic acid, malic acid, trisodium citrate, and phenylacetic acid, and L-arabinose.
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</paragraph>
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<paragraph id="1A1BFA1CFF9EDA40FCC8E4F6FB93FC68" blockId="15.[809,1414,261,995]" pageId="15" pageNumber="176">
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Strain8 (= NIBRBAC000500528) was isolated from a soil sample,
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<collectingRegion id="D86034FEFF9EDA40FC58E496FBC0FC69" box="[943,1024,971,995]" country="South Korea" name="Jeju" pageId="15" pageNumber="176">Jeju-do</collectingRegion>
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,
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<collectingCountry id="62B3BA8CFF9EDA40FBFCE496FB90FC68" box="[1035,1104,971,994]" name="South Korea" pageId="15" pageNumber="176">Korea</collectingCountry>
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.
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</paragraph>
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</subSubSection>
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</treatment>
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</document> |