164 lines
17 KiB
XML
164 lines
17 KiB
XML
<document id="1374ACA4AE0092651D18ED8CAB8DADED" ID-CLB-Dataset="285558" ID-DOI="10.1016/j.phytochem.2015.02.006" ID-GBIF-Dataset="152a92bc-4c43-4de7-a8a1-c36679f34614" ID-ISSN="1873-3700" ID-Zenodo-Dep="10486907" IM.bibliography_approvedBy="guilherme" IM.illustrations_approvedBy="guilherme" IM.materialsCitations_approvedBy="guilherme" IM.metadata_approvedBy="felipe" IM.tables_approvedBy="guilherme" IM.taxonomicNames_approvedBy="guilherme" IM.treatments_approvedBy="guilherme" checkinTime="1704950376088" checkinUser="felipe" docAuthor="Meyer, Rachel S., Whitaker, Bruce D., Little, Damon P., Wu, Shi-Biao, Kennelly, Edward J., Long, Chun-Lin & Litt, Amy" docDate="2015" docId="03DF87D2FFF8C1233F733C02FA159BC3" docLanguage="en" docName="Phytochemistry.115.194-206.pdf" docOrigin="Phytochemistry 115 (1)" docSource="http://dx.doi.org/10.1016/j.phytochem.2015.02.006" docStyle="DocumentStyle:9E596C34F4E94307D29315B03ACE1007.6:Phytochemistry.2014-2019.journal_article" docStyleId="9E596C34F4E94307D29315B03ACE1007" docStyleName="Phytochemistry.2014-2019.journal_article" docStyleVersion="6" docTitle="Solanum melongena L." docType="treatment" docVersion="2" lastPageNumber="200" masterDocId="FFE6FFAAFFFEC1253C563E06FFA59E56" masterDocTitle="Parallel reductions in phenolic constituents resulting from the domestication of eggplant" masterLastPageNumber="206" masterPageNumber="194" pageNumber="200" updateTime="1705513718066" updateUser="ExternalLinkService">
|
||
<mods:mods id="541E4EAD9C5DF6D79C438344C6CB24E9" xmlns:mods="http://www.loc.gov/mods/v3">
|
||
<mods:titleInfo id="3E602B5B91796C2090D9F5D102C5629F">
|
||
<mods:title id="4273466C2E335994EA77000C9612E8E6">Parallel reductions in phenolic constituents resulting from the domestication of eggplant</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:name id="3930D947F5DB18C446C5F505CA7CCBC5" type="personal">
|
||
<mods:role id="74703D23831985DEC94B090CB50430FE">
|
||
<mods:roleTerm id="D89DF9C142EC2D23083E2683D0398020">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="71FBECDA67A9DEB9D7E21B2B26CA2614">Meyer, Rachel S.</mods:namePart>
|
||
<mods:affiliation id="F88819BA601B9F4A8288FA10BAA69020">The New York Botanical Garden, 2900 Southern Blvd, Bronx, NY 10458, United States & The Graduate Center, The City University of New York, 365 Fifth Avenue, New York, NY 10016, United States & New York University, Center for Genomics and Systems Biology, 12 Waverly Place, New York, NY 10003, United States</mods:affiliation>
|
||
</mods:name>
|
||
<mods:name id="7D8273A1C120812F074B453D5B23ABD7" type="personal">
|
||
<mods:role id="0DD6E0DF3A6CEF1E4E01D1E82AF8CA75">
|
||
<mods:roleTerm id="6D24C7D4E1575698DB1C60C0ACFB3F98">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="2D12B233D6C4ED8D725A93784CFE7465">Whitaker, Bruce D.</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="4D0FF6480FA583F5438C3FD8002D716D" type="personal">
|
||
<mods:role id="3ED4E114D19AEF51B0D61FD0C6D41301">
|
||
<mods:roleTerm id="A42E8F7447A5A35A7A1B85748F6734AF">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="5AEE7FC16D0D78461D9208C539372228">Little, Damon P.</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="740FE8886ED3747289AE1CB23B3184C7" type="personal">
|
||
<mods:role id="83580C4A8E5BAC58D0C817C9C182D663">
|
||
<mods:roleTerm id="4D1B15788223F1176B44846BEB1A1B50">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="37E080F84BC01303B91E7B7D2E49468C">Wu, Shi-Biao</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="1004C1037C68F2F7E01863FDD2083491" type="personal">
|
||
<mods:role id="9BA88D26EBB97A64D7F2B0E8D79D9A52">
|
||
<mods:roleTerm id="358247A4F6A8D755725D1E47A6AC9F46">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="255AFB9676A306E470B07D744BF11A91">Kennelly, Edward J.</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="B54EBA7EC358CDDB456C57D3211B94BD" type="personal">
|
||
<mods:role id="13298B2E3BC9BC74F42A8E9242A44075">
|
||
<mods:roleTerm id="E562AF360572BF7F9E81A53A4E87164C">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="1B93BF34EACF0E59B0F294168531207B">Long, Chun-Lin</mods:namePart>
|
||
</mods:name>
|
||
<mods:name id="EA7E01C68476FA7B4EF8D6BC8C21CD16" type="personal">
|
||
<mods:role id="13E96BF52287429291BAEA49BFFFCE3E">
|
||
<mods:roleTerm id="92F1ED463E4B105F690D96093A21A927">Author</mods:roleTerm>
|
||
</mods:role>
|
||
<mods:namePart id="859704E8961EB5D372B828AC6BD79620">Litt, Amy</mods:namePart>
|
||
</mods:name>
|
||
<mods:typeOfResource id="B4A5209D780A932FE8274B3E77E6BCE0">text</mods:typeOfResource>
|
||
<mods:relatedItem id="6B36F14229BD4D0BD70D2A74410129C1" type="host">
|
||
<mods:titleInfo id="6772B437CEA89E9A35997E1A7A4711BE">
|
||
<mods:title id="8E5A6BF8A782A188073265AEE4FD1C4C">Phytochemistry</mods:title>
|
||
</mods:titleInfo>
|
||
<mods:part id="B4AC25A108805A46B2F728634D06736D">
|
||
<mods:date id="3F2EB43FEDE3B4AAE165A629C3E94B95">2015</mods:date>
|
||
<mods:detail id="9504BE1FA8CDE22AB2E3AE7E105A6E35" type="pubDate">
|
||
<mods:number id="5ECA937BB8703827E51E810546871313">2015-07-31</mods:number>
|
||
</mods:detail>
|
||
<mods:detail id="559E093885FE42018966734203B5FDB9" type="volume">
|
||
<mods:number id="F5537D9F6401B7EE428715FAD5E565A6">115</mods:number>
|
||
</mods:detail>
|
||
<mods:detail id="BD754030E3F170D39CC63BF8EE91A908" type="issue">
|
||
<mods:number id="CCDFD1094F3D3291F6F8F3595DAC2B32">1</mods:number>
|
||
</mods:detail>
|
||
<mods:extent id="8BFFCF7BD310798A9FE7D98FB87F0906" unit="page">
|
||
<mods:start id="CA19FAC9B890ED4C3F7431B83E137F13">194</mods:start>
|
||
<mods:end id="2A155B23D55A3DA55F2ACC0A413DF623">206</mods:end>
|
||
</mods:extent>
|
||
</mods:part>
|
||
</mods:relatedItem>
|
||
<mods:location id="FBAF84633A7F9099EA301C5BDE73AC62">
|
||
<mods:url id="A61EE71E0A447EF2C8D4D51CCA09DA71">http://dx.doi.org/10.1016/j.phytochem.2015.02.006</mods:url>
|
||
</mods:location>
|
||
<mods:classification id="997D5002475FDA615017FB465183050A">journal article</mods:classification>
|
||
<mods:identifier id="548508A162861D6F19F6AEFE8108E4FE" type="CLB-Dataset">285558</mods:identifier>
|
||
<mods:identifier id="6C81881D457572B8FF58D40FBC35F0B8" type="DOI">10.1016/j.phytochem.2015.02.006</mods:identifier>
|
||
<mods:identifier id="AD67455A9CCDB62858DD5C6DFFD51B92" type="GBIF-Dataset">152a92bc-4c43-4de7-a8a1-c36679f34614</mods:identifier>
|
||
<mods:identifier id="589207982C73B0315FF7365B7039D09D" type="ISSN">1873-3700</mods:identifier>
|
||
<mods:identifier id="408E05AE0C48103D8603C6EFCE3A87B5" type="Zenodo-Dep">10486907</mods:identifier>
|
||
</mods:mods>
|
||
<treatment id="03DF87D2FFF8C1233F733C02FA159BC3" ID-DOI="http://doi.org/10.5281/zenodo.10523776" ID-Zenodo-Dep="10523776" LSID="urn:lsid:plazi:treatment:03DF87D2FFF8C1233F733C02FA159BC3" httpUri="http://treatment.plazi.org/id/03DF87D2FFF8C1233F733C02FA159BC3" lastPageNumber="200" pageId="6" pageNumber="200">
|
||
<subSubSection id="C36C654FFFF8C1233F733C02FA2C9C4E" box="[805,1417,516,536]" pageId="6" pageNumber="200" type="nomenclature">
|
||
<paragraph id="8BC936C4FFF8C1233F733C02FA2C9C4E" blockId="6.[805,1417,516,536]" box="[805,1417,516,536]" pageId="6" pageNumber="200">
|
||
<heading id="D08181A8FFF8C1233F733C02FA2C9C4E" box="[805,1417,516,536]" fontSize="36" level="2" pageId="6" pageNumber="200" reason="3">
|
||
<emphasis id="B902EAD6FFF8C1233F733C02FA2C9C4E" box="[805,1417,516,536]" italics="true" pageId="6" pageNumber="200">
|
||
2.6. Differences in
|
||
<taxonomicName id="4C764D47FFF8C1233F8E3C02FBFD9C4E" ID-CoL="6YTHR" authorityName="L." box="[984,1112,516,536]" class="Magnoliopsida" family="Solanaceae" genus="Solanum" kingdom="Plantae" order="Solanales" pageId="6" pageNumber="200" phylum="Tracheophyta" rank="species" species="melongena">S. melongena</taxonomicName>
|
||
profiles among genetic clusters
|
||
</emphasis>
|
||
</heading>
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C36C654FFFF8C1233F123C3BFA159BC3" pageId="6" pageNumber="200" type="biology_ecology">
|
||
<paragraph id="8BC936C4FFF8C1233F123C3BFB8C9DA5" blockId="6.[805,1475,573,1429]" pageId="6" pageNumber="200">
|
||
To assess whether the eggplants from lineages of mainland origins (
|
||
<collectingCountry id="F3617654FFF8C1233F203C5FFC0F9C3A" box="[886,938,601,620]" name="India" pageId="6" pageNumber="200">India</collectingCountry>
|
||
and
|
||
<collectingCountry id="F3617654FFF8C1233F8A3C5FFBB29C3A" box="[988,1047,601,620]" name="China" pageId="6" pageNumber="200">China</collectingCountry>
|
||
) were chemically distinct from each other or from the lineage largely made up of island (Malesian) landraces, chemical differences, if any, were explored among the clusters in the PCoA remade from the AFLP data (
|
||
<bibRefCitation id="EFE74B35FFF8C12338F73CABFAC59CE9" author="Meyer, R. S. & Karol, K. G. & Little, D. P. & Nee, M. H. & Litt, A." box="[1185,1376,684,704]" pageId="6" pageNumber="200" pagination="685 - 701" refId="ref14407" refString="Meyer, R. S., Karol, K. G., Little, D. P., Nee, M. H., Litt, A., 2012 b. Phylogeographic relationships among Asian eggplants and new perspectives on eggplant domestication. Mol. Phylogenet. Evol. 63, 685 - 701." type="journal article" year="2012">Meyer et al., 2012b</bibRefCitation>
|
||
) containing only
|
||
<taxonomicName id="4C764D47FFF8C1233FDA3CC1FBB79C8D" box="[908,1042,711,731]" class="Magnoliopsida" family="Solanaceae" genus="Solanum" kingdom="Plantae" order="Solanales" pageId="6" pageNumber="200" phylum="Tracheophyta" rank="species" species="melongena">
|
||
<emphasis id="B902EAD6FFF8C1233FDA3CC1FBB79C8D" box="[908,1042,711,731]" italics="true" pageId="6" pageNumber="200">S. melongena</emphasis>
|
||
</taxonomicName>
|
||
samples used in this study. The PCoA resolved three clusters, in which the Chinese eggplants fell into both of the more populated clusters but were overrepresented in one (R), the Indian eggplants fell into the other of these clusters (L), and the small-fruited
|
||
<taxonomicName id="4C764D47FFF8C123387E3D31FAEB9D1D" box="[1064,1358,823,843]" class="Magnoliopsida" family="Solanaceae" genus="Solanum" kingdom="Plantae" order="Solanales" pageId="6" pageNumber="200" phylum="Tracheophyta" rank="subSpecies" species="melongena" subSpecies="ovigerum">
|
||
<emphasis id="B902EAD6FFF8C123387E3D31FB029D1D" box="[1064,1191,823,843]" italics="true" pageId="6" pageNumber="200">S. melongena</emphasis>
|
||
subsp.
|
||
<emphasis id="B902EAD6FFF8C12338A53D31FAEB9D1D" box="[1267,1358,823,843]" italics="true" pageId="6" pageNumber="200">ovigerum</emphasis>
|
||
</taxonomicName>
|
||
accessions, from SE Asia and
|
||
<collectingCountry id="F3617654FFF8C1233FB63D52FB8A9D31" box="[992,1071,852,871]" name="Malaysia" pageId="6" pageNumber="200">Malesia</collectingCountry>
|
||
, fell into the third, smaller, cluster (T) (
|
||
<figureCitation id="134D2A41FFF8C1233F7B3D76FCC79DD5" box="[813,866,880,899]" captionStart="Fig" captionStartId="8.[87,113,778,792]" captionTargetBox="[120,723,182,743]" captionTargetId="figure-759@8.[119,726,181,749]" captionTargetPageId="8" captionText="Fig. 5. AFLP plot of only S. melongena samples. L, R, and T indicate delimitations for left, right, and top clusters that are subsets of the AFLP clusters in Meyer et al. (2012b), which represent hypothesized common lineages of three separate domestication events. Clusters are hypothesized to represent the following lineages: L = Indian background, R = Chinese background, T = Malesian background (S. melongena subsp. ovigerum) ." figureDoi="http://doi.org/10.5281/zenodo.10523772" httpUri="https://zenodo.org/record/10523772/files/figure.png" pageId="6" pageNumber="200">Fig. 5</figureCitation>
|
||
). ANOVA was used to assess whether there were differences in the abundance of any compounds among the three clusters, which would characterize the clusters for differences attributed to divergent selection on the lineages defined by genetic distance and geographic structure.
|
||
</paragraph>
|
||
<paragraph id="8BC936C4FFF8C1233F123DFDFA159BC3" blockId="6.[805,1475,573,1429]" pageId="6" pageNumber="200">
|
||
ANOVA was performed for each of the 20 compounds that were present in at least one
|
||
<taxonomicName id="4C764D47FFF8C12338593A10FB2A9A7C" box="[1039,1167,1046,1066]" class="Magnoliopsida" family="Solanaceae" genus="Solanum" kingdom="Plantae" order="Solanales" pageId="6" pageNumber="200" phylum="Tracheophyta" rank="species" species="melongena">
|
||
<emphasis id="B902EAD6FFF8C12338593A10FB2A9A7C" box="[1039,1167,1046,1066]" italics="true" pageId="6" pageNumber="200">S. melongena</emphasis>
|
||
</taxonomicName>
|
||
accession. Results established six compounds that were significantly different in abundance (
|
||
<emphasis id="B902EAD6FFF8C1233F7B3A48FCEF9A34" box="[813,842,1102,1122]" italics="true" pageId="6" pageNumber="200">p <</emphasis>
|
||
0.05) among the three clusters (
|
||
<tableCitation id="C6F4037FFFF8C12338C53A49FB799A34" box="[1171,1244,1103,1122]" captionStart="Table 5" captionStartId="8.[87,131,981,995]" captionTargetPageId="8" captionText="Table 5 One-way Analysis of Variance (ANOVA) results for compounds significantly different (p <0.05) among left, right, and top regions of the S. melongena AFLP plot shown in Fig. 5. ‘‘Gr.’’ corresponds to group of left, right, or top as L, R, T, respectively. Sample sizes are as follows: L: n = 30; R: n = 7; T: n = 5." httpUri="http://table.plazi.org/id/DF09664CFFF6C12D3C013DD3FE769A68" pageId="6" pageNumber="200" tableUuid="DF09664CFFF6C12D3C013DD3FE769A68">Table 5</tableCitation>
|
||
), but these differences were between
|
||
<taxonomicName id="4C764D47FFF8C1233FEF3A6CFB7B9A28" box="[953,1246,1130,1150]" class="Magnoliopsida" family="Solanaceae" genus="Solanum" kingdom="Plantae" order="Solanales" pageId="6" pageNumber="200" phylum="Tracheophyta" rank="subSpecies" species="melongena" subSpecies="ovigerum">
|
||
<emphasis id="B902EAD6FFF8C1233FEF3A6CFB9D9A28" box="[953,1080,1130,1150]" italics="true" pageId="6" pageNumber="200">S. melongena</emphasis>
|
||
subsp.
|
||
<emphasis id="B902EAD6FFF8C12338D53A6CFB7B9A28" box="[1155,1246,1130,1150]" italics="true" pageId="6" pageNumber="200">ovigerum</emphasis>
|
||
</taxonomicName>
|
||
and the two mainland lineages; the two mainland lineages were not distinct from each other. Four of these compounds were the HCAAs (
|
||
<emphasis id="B902EAD6FFF8C12339693AA5FAE99AE0" bold="true" box="[1343,1356,1187,1206]" pageId="6" pageNumber="200">7</emphasis>
|
||
,
|
||
<emphasis id="B902EAD6FFF8C123390D3AA4FACD9AE3" bold="true" box="[1371,1384,1186,1205]" pageId="6" pageNumber="200">9</emphasis>
|
||
,
|
||
<emphasis id="B902EAD6FFF8C123392E3AA4FA349AE3" bold="true" box="[1400,1425,1186,1205]" pageId="6" pageNumber="200">11</emphasis>
|
||
,
|
||
<emphasis id="B902EAD6FFF8C12339F73AA4FA1F9AE3" bold="true" box="[1441,1466,1186,1205]" pageId="6" pageNumber="200">12</emphasis>
|
||
) and the remaining two compounds were tryptophan (
|
||
<emphasis id="B902EAD6FFF8C12339033AB8FACB9A87" bold="true" box="[1365,1390,1214,1233]" pageId="6" pageNumber="200">32</emphasis>
|
||
) and 5-
|
||
<emphasis id="B902EAD6FFF8C1233F733ADFFC919ABB" box="[805,820,1241,1261]" italics="true" pageId="6" pageNumber="200">O</emphasis>
|
||
-[
|
||
<emphasis id="B902EAD6FFF8C1233F123ADFFCF59ABB" box="[836,848,1241,1261]" italics="true" pageId="6" pageNumber="200">Z</emphasis>
|
||
]-CQA (
|
||
<emphasis id="B902EAD6FFF8C1233FF73ADCFC1F9ABB" bold="true" box="[929,954,1242,1261]" pageId="6" pageNumber="200">17</emphasis>
|
||
). Five of these compounds [all but tryptophan (
|
||
<emphasis id="B902EAD6FFF8C1233F7B3AF0FCE39B5F" bold="true" box="[813,838,1270,1289]" pageId="6" pageNumber="200">32</emphasis>
|
||
)] were the most abundant in cluster T, representing
|
||
<taxonomicName id="4C764D47FFF8C12339313AF3FBA59B73" class="Magnoliopsida" family="Solanaceae" genus="Solanum" kingdom="Plantae" order="Solanales" pageId="6" pageNumber="200" phylum="Tracheophyta" rank="subSpecies" species="melongena" subSpecies="ovigerum">
|
||
<emphasis id="B902EAD6FFF8C12339313AF3FCF69B73" italics="true" pageId="6" pageNumber="200">S. melongena</emphasis>
|
||
subsp.
|
||
<emphasis id="B902EAD6FFF8C1233FF33B17FBA59B73" box="[933,1024,1297,1317]" italics="true" pageId="6" pageNumber="200">ovigerum</emphasis>
|
||
</taxonomicName>
|
||
and the Malesian lineage (
|
||
<figureCitation id="134D2A41FFF8C12339773B14FAFF9B73" box="[1313,1370,1298,1317]" captionStart="Fig" captionStartId="8.[87,113,778,792]" captionTargetBox="[120,723,182,743]" captionTargetId="figure-759@8.[119,726,181,749]" captionTargetPageId="8" captionText="Fig. 5. AFLP plot of only S. melongena samples. L, R, and T indicate delimitations for left, right, and top clusters that are subsets of the AFLP clusters in Meyer et al. (2012b), which represent hypothesized common lineages of three separate domestication events. Clusters are hypothesized to represent the following lineages: L = Indian background, R = Chinese background, T = Malesian background (S. melongena subsp. ovigerum) ." figureDoi="http://doi.org/10.5281/zenodo.10523772" httpUri="https://zenodo.org/record/10523772/files/figure.png" pageId="6" pageNumber="200">Fig. 5</figureCitation>
|
||
,
|
||
<tableCitation id="C6F4037FFFF8C123393E3B14FA109B73" box="[1384,1461,1298,1317]" captionStart="Table 5" captionStartId="8.[87,131,981,995]" captionTargetPageId="8" captionText="Table 5 One-way Analysis of Variance (ANOVA) results for compounds significantly different (p <0.05) among left, right, and top regions of the S. melongena AFLP plot shown in Fig. 5. ‘‘Gr.’’ corresponds to group of left, right, or top as L, R, T, respectively. Sample sizes are as follows: L: n = 30; R: n = 7; T: n = 5." httpUri="http://table.plazi.org/id/DF09664CFFF6C12D3C013DD3FE769A68" pageId="6" pageNumber="200" tableUuid="DF09664CFFF6C12D3C013DD3FE769A68">Table 5</tableCitation>
|
||
). The finding that the island lineage of eggplant was distinguished by relatively high abundance of HCAAs, whereas mainland eggplant lineages were not chemically distinct, suggests this subspecies underwent a strikingly different evolutionary trajectory.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |