238 lines
24 KiB
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238 lines
24 KiB
XML
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<mods:title id="8FE2106BC3F4D9A8F8B815701155FA8C">Diversity and phylogeny of basidiomycetous yeasts from plant leaves and soil: Proposal of two new orders, three new families, eight new genera and one hundred and seven new species</mods:title>
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<mods:namePart id="3633D3890D133A76A420E1F09E9539D0">Yuan, F. - X.</mods:namePart>
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<mods:affiliation id="7CA5000C04EDD7E54706AF927FC9BDBC">State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China & North Minzu University, Yinchuan, Ningxia, 750030, China</mods:affiliation>
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<mods:affiliation id="AF169EB1AF4AEC63820A16A9B73BB2A0">State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China</mods:affiliation>
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<mods:namePart id="1B76D3AB0A8142B78421A883A9D3EC54">Guo, L. - D.</mods:namePart>
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<mods:affiliation id="04113F070433DC2838CAAD6A2AF95447">Purdue University, Department of Botany and Plant Pathology, West Lafayette, IN, 47901, USA</mods:affiliation>
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<mods:affiliation id="28CC69DA104C6659A9A9107A6EF3B4C5">UCIBIO-REQUIMTE, Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Caparica, Portugal & PYCC - Portuguese Yeast Culture Collection, Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Caparica, Portugal</mods:affiliation>
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<mods:namePart id="A0B07B14D9C327F3EA06196EB064F941">Jindamorakot, S.</mods:namePart>
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<mods:affiliation id="595D9C0F78C180C9F225F537633110F3">National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand</mods:affiliation>
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<mods:namePart id="D03244BA1A76AE3EBDCAA3744B54351E">Turchetti, B.</mods:namePart>
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<mods:affiliation id="4335A660A85A8F7BFF0399334DA4EBDE">Department of Agriculture, Food and Environmental Sciences & Industrial Yeasts Collection DBVPG, University of Perugia, Perugia, 74 - I- 06121, Italy</mods:affiliation>
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<mods:affiliation id="50AAAFC78AD90ECFD89B2527AF914F19">School of Pharmacy and Biomolecular Sciences, University of Brighton, Brighton, BN 2 4 GJ, UK</mods:affiliation>
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<mods:affiliation id="48C9EE657EA12C2307F3DFEDF0C9FCD3">TISTR Culture Collection, Thailand Institute of Scientific and Technological Research (TISTR), 35 M 3, Technopolis, Khlong Ha, Khlong Luang, Pathum Thani, 12120, Thailand</mods:affiliation>
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<mods:namePart id="669EFAF2234155AD0C726479C759F469">Wang, Q. - M.</mods:namePart>
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<mods:affiliation id="B7207D4F736D233B5678C64CF93A7C36">State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China & College of Life Sciences, Hebei University, Baoding, Hebei Province, 071002, China</mods:affiliation>
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<mods:nameIdentifier id="E953CAEFCCFF09336790482301890736" type="email">wangqm@im.ac.cn</mods:nameIdentifier>
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<mods:namePart id="D47D46E4321745E405F717653A8A8A96">Bai, F. - Y.</mods:namePart>
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<mods:affiliation id="B5BBE355455DA1207D49024135F806AB">State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China</mods:affiliation>
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<mods:title id="EA99D5A479C10A508F98DBF7412EB9C0">Studies In Mycology</mods:title>
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<mods:part id="3CB28B718BC1BB4B611F36019D06ED81">
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<mods:date id="4A53388CA20A6F2D45992CA018F50F83">2020</mods:date>
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<mods:number id="5E4257CF8049F3400CDE9C189DAEF932">2020-01-28</mods:number>
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<mods:number id="DCFE7693011F36A5B249891D48ABA5C2">96</mods:number>
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<treatment id="03DF87BD5575FF95505C3D1EFD25FDB8" ID-DOI="http://doi.org/10.5281/zenodo.10474987" ID-Zenodo-Dep="10474987" LSID="urn:lsid:plazi:treatment:03DF87BD5575FF95505C3D1EFD25FDB8" httpUri="http://treatment.plazi.org/id/03DF87BD5575FF95505C3D1EFD25FDB8" lastPageId="109" lastPageNumber="126" pageId="108" pageNumber="125">
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<subSubSection id="C36C65205575FF94505C3D1EFB39FBD6" pageId="108" pageNumber="125" type="nomenclature">
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<taxonomicName id="4C764D285575FF94505C3D1EFAB0FBF6" ID-CoL="9ZHFG" authority="Q.M. Wang, F.Y. Bai & A.H. Li" authorityName="Q. M. Wang, F. Y. Bai & A. H. Li" authorityYear="2020" box="[830,1378,1077,1102]" class="Microbotryomycetes" family="Kriegeriaceae" genus="Yamadamyces" higherTaxonomySource="CoL,GBIF" kingdom="Fungi" order="Kriegeriales" pageId="108" pageNumber="125" phylum="Basidiomycota" rank="species" species="terricola" status="sp. nov.">
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<emphasis id="B902EAB95575FF94505C3D1EFBE4FBF6" bold="true" box="[830,1078,1077,1102]" italics="true" pageId="108" pageNumber="125">Yamadamyces terricola</emphasis>
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Q.M. Wang, F.Y. Bai & A.H. Li
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</taxonomicName>
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<emphasis id="B902EAB95575FF94560B3D1EFA69FBF6" bold="true" box="[1385,1467,1077,1102]" italics="true" pageId="108" pageNumber="125">
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<taxonomicNameLabel id="A23157C25575FF94560B3D1EFA69FBF6" box="[1385,1467,1077,1102]" pageId="108" pageNumber="125" rank="species">sp. nov.</taxonomicNameLabel>
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</emphasis>
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MycoBank MB828847.
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<figureCitation id="134D2A2E5575FF94574B3D7EFB54FBD6" box="[1065,1158,1109,1134]" captionStart="Fig" captionStartId="103.[119,147,2024,2044]" captionTargetBox="[120,1459,138,1998]" captionTargetId="figure-1@103.[119,1460,136,1999]" captionTargetPageId="103" captionText="Fig. 17. SEM image of vegetative cells grown in YM broth for 5 d at 17 °C. (A, B) Ros. cystopteridis CGMCC 2.2615T, A Bars = 10 μm, B Bars = 2 μm; (C) Ros. motuoensis CGMCC 2.5819T, Bars = 10 μm; (D) He. tridentata CGMCC 2.5602T, Bars = 10 μm; (E, F) He. cylindrica CGMCC 2.5650T, E Bars = 20 μm, F Bars = 5 μm; (G) Ya. terricola CGMCC 2.5820T, Bars = 10 μm; (H) Ch. rhododendri CGMCC 2.5821T, Bars = 5 μm." figureDoi="http://doi.org/10.5281/zenodo.10497284" httpUri="https://zenodo.org/record/10497284/files/figure.png" pageId="108" pageNumber="125">Figs 17G</figureCitation>
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and
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<figureCitation id="134D2A2E5575FF9457DE3D7EFB3AFBD6" box="[1212,1256,1109,1134]" captionStart="Fig" captionStartId="106.[129,157,2006,2026]" captionTargetId="figure-1@105.[119,1460,136,2049]" captionTargetPageId="105" captionText="Fig. 18. Vegetative cells grown in YM broth for 5 d at 17 °C and ballistoconidia produced on corn meal agar after 7 d at 17 °C. (A, B) Rh. jianfalingensis CGMCC 2.3532T; (C, D) Rh. fuzhouensis CGMCC 2.4435T; (E) He. tridentata CGMCC 2.5602T; (F) He. cylindrica CGMCC 2.5650T; (G) Mic. swertiae CGMCC 2.3533T; (H) Ya. terricola CGMCC 2.5820T; (I) O. nepetae CGMCC 2.5824T; (J) O. dicranopteridis CGMCC 2.3441T; (K, L) Ch. pseudogriseoflava CGMCC 2.5629T; (M, N) Ch. sambuci CGMCC 2.2618T; (O) Ch. iridis CGMCC 2.2769T; (P) Ch. rhododendri CGMCC 2.5821T. Bars = 10 μm." figureDoi="http://doi.org/10.5281/zenodo.10497286" httpUri="https://zenodo.org/record/10497286/files/figure.png" pageId="108" pageNumber="125">18H</figureCitation>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="C36C65205575FF94505C3DAEFAD2FB06" pageId="108" pageNumber="125" type="etymology">
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<paragraph id="8BC936AB5575FF94505C3DAEFAD2FB06" blockId="108.[830,1467,1157,1214]" pageId="108" pageNumber="125">
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<emphasis id="B902EAB95575FF94505C3DAEFC74FB26" box="[830,934,1157,1182]" italics="true" pageId="108" pageNumber="125">Etymology</emphasis>
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: the specific epithet
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<taxonomicName id="4C764D285575FF94571D3DAEFB1CFB26" authorityName="Q. M. Wang, F. Y. Bai & A. H. Li" authorityYear="2020" box="[1151,1230,1157,1182]" class="Microbotryomycetes" family="Kriegeriaceae" genus="Yamadamyces" higherTaxonomySource="CoL,GBIF" kingdom="Fungi" order="Kriegeriales" pageId="108" pageNumber="125" phylum="Basidiomycota" rank="species" species="terricola">
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<emphasis id="B902EAB95575FF94571D3DAEFB1CFB26" box="[1151,1230,1157,1182]" italics="true" pageId="108" pageNumber="125">terricola</emphasis>
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</taxonomicName>
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refers to the substrate from which the type strain was isolated, soil.
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</paragraph>
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</subSubSection>
|
||
<subSubSection id="C36C65205575FF94505C3DFFFC78F782" pageId="108" pageNumber="125" type="biology_ecology">
|
||
<paragraph id="8BC936AB5575FF94505C3DFFFC70FA54" blockId="108.[830,1469,1236,1516]" pageId="108" pageNumber="125">
|
||
<emphasis id="B902EAB95575FF94505C3DFFFBC9FB55" box="[830,1051,1236,1261]" italics="true" pageId="108" pageNumber="125">Culture characteristics</emphasis>
|
||
: In YM broth, after 7 d at 17 °C, cells are fusiform, 2.5–3.4 × 6.0– 11.8 μm and single, budding is polar (
|
||
<figureCitation id="134D2A2E5575FF9450273C3FFC4FFA95" box="[837,925,1300,1325]" captionStart="Fig" captionStartId="106.[129,157,2006,2026]" captionTargetId="figure-1@105.[119,1460,136,2049]" captionTargetPageId="105" captionText="Fig. 18. Vegetative cells grown in YM broth for 5 d at 17 °C and ballistoconidia produced on corn meal agar after 7 d at 17 °C. (A, B) Rh. jianfalingensis CGMCC 2.3532T; (C, D) Rh. fuzhouensis CGMCC 2.4435T; (E) He. tridentata CGMCC 2.5602T; (F) He. cylindrica CGMCC 2.5650T; (G) Mic. swertiae CGMCC 2.3533T; (H) Ya. terricola CGMCC 2.5820T; (I) O. nepetae CGMCC 2.5824T; (J) O. dicranopteridis CGMCC 2.3441T; (K, L) Ch. pseudogriseoflava CGMCC 2.5629T; (M, N) Ch. sambuci CGMCC 2.2618T; (O) Ch. iridis CGMCC 2.2769T; (P) Ch. rhododendri CGMCC 2.5821T. Bars = 10 μm." figureDoi="http://doi.org/10.5281/zenodo.10497286" httpUri="https://zenodo.org/record/10497286/files/figure.png" pageId="108" pageNumber="125">Fig. 18H</figureCitation>
|
||
), a sediment is formed. After 1 mo at 17 °C, a ring and a sediment are present. On YM agar, after 1 mo at 17 °C, the streak culture is cream, butyrous, smooth and glossy. The margin is entire. In Dalmau plate culture on corn meal agar, pseudohyphae are not formed. Sexual structures are not observed on YM, PDA, V8 and CM agar. Ballistoconidia are not produced.
|
||
</paragraph>
|
||
<paragraph id="8BC936AB5575FF94505C3F28FC78F782" blockId="108.[830,1469,1539,2106]" pageId="108" pageNumber="125">
|
||
<emphasis id="B902EAB95575FF94505C3F28FA96F9A4" box="[830,1348,1539,1564]" italics="true" pageId="108" pageNumber="125">Physiological and biochemical characteristics</emphasis>
|
||
: Glucose fermentation is absent. Glucose, sucrose, maltose, trehalose, melezitose, D-glucosamine (delayed and weak), ethanol, glycerol (weak), ribitol, D-mannitol, D-glucitol and succinate (delayed and weak) are assimilated as sole carbon sources. Galactose, L-sorbose, cellobiose, lactose, melibiose, raffinose, inulin, soluble starch, D-xylose, L-arabinose, D-arabinose, Dribose, L-rhamnose, N-Acetyl-D-glucosamine, methanol, erythritol, galactitol, Methyl-α- D-glucoside, salicin, DL-lactate, citrate, myo-inositol and hexadecane are not assimilated. Ammonium sulfate, L-lysine (weak), ethylamine hydrochloride and cadaverine dihydrochloride are assimilated as sole nitrogen sources. Potassium nitrate and sodium nitrite are not assimilated. Maximum growth temperature is 26– 27 °C. Growth in vitamin-free medium is postive. Starch-like substances are not produced. Growth on 50 % (w/w) glucose-yeast extract agar is negative. Urease activity is positive. Diazonium Blue B reaction is positive.
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C36C65205574FF9553F039A2FD27FE99" pageId="109" pageNumber="126" type="diagnosis">
|
||
<paragraph id="8BC936AB5574FF9553F039A2FD27FE99" blockId="109.[119,757,137,289]" pageId="109" pageNumber="126">
|
||
Physiologically,
|
||
<taxonomicName id="4C764D285574FF95525739A2FE62FF1A" authorityName="Q. M. Wang, F. Y. Bai & A. H. Li" authorityYear="2020" box="[309,432,137,162]" class="Microbotryomycetes" family="Kriegeriaceae" genus="Yamadamyces" higherTaxonomySource="CoL,GBIF" kingdom="Fungi" order="Kriegeriales" pageId="109" pageNumber="126" phylum="Basidiomycota" rank="species" species="terricola">
|
||
<emphasis id="B902EAB95574FF95525739A2FE62FF1A" box="[309,432,137,162]" italics="true" pageId="109" pageNumber="126">Ya. terricola</emphasis>
|
||
</taxonomicName>
|
||
differs from its closely related species
|
||
<taxonomicName id="4C764D285574FF9553AF3983FE9DFF79" box="[205,335,168,193]" class="Microbotryomycetes" family="Kriegeriaceae" genus="Yamadamyces" higherTaxonomySource="CoL,GBIF" kingdom="Fungi" order="Kriegeriales" pageId="109" pageNumber="126" phylum="Basidiomycota" rank="species" species="rosulatus">
|
||
<emphasis id="B902EAB95574FF9553AF3983FE9DFF79" box="[205,335,168,193]" italics="true" pageId="109" pageNumber="126">Ya. rosulatus</emphasis>
|
||
</taxonomicName>
|
||
in its inability to assimilate cellobiose, Lrhamnose, N-Acetyl-D-glucosamine, salicin, D-gluconate, DLlactate, citrate, myo-inositol, potassium nitrate and sodium nitrite and its ability to growin vitamin-free medium (
|
||
<tableCitation id="C6F403105574FF9551123823FD35FE99" box="[624,743,264,289]" captionStart="Table 1" captionStartId="3.[155,212,132,157]" captionTargetBox="[155,2057,199,1435]" captionText="Table 1. List of yeasts employed and GenBank numbers determined in this study." httpUri="http://table.plazi.org/id/DF096623551AFFFB53F939AFFC0AFF25" pageId="109" pageNumber="126" tableUuid="DF096623551AFFFB53F939AFFC0AFF25">Table S1.32</tableCitation>
|
||
).
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C36C65205574FF9553153813FD8EFE29" pageId="109" pageNumber="126" type="materials_examined">
|
||
<paragraph id="8BC936AB5574FF9553153813FD8EFE29" blockId="109.[119,757,312,401]" pageId="109" pageNumber="126">
|
||
<materialsCitation id="3B1E3CF65574FF9553153813FD8EFE29" collectingDate="2015-08" collectorName="Q. - M. Wang" country="China" location="Daxinganling" municipality="Daxinganling" pageId="109" pageNumber="126" specimenCount="1" typeStatus="holotype">
|
||
<emphasis id="B902EAB95574FF9553153813FF61FEE9" box="[119,179,312,337]" italics="true" pageId="109" pageNumber="126">Typus</emphasis>
|
||
:
|
||
<emphasis id="B902EAB95574FF9553A03813FED2FEE9" bold="true" box="[194,256,312,337]" pageId="109" pageNumber="126">
|
||
<collectingCountry id="F361763B5574FF9553A03813FED2FEE9" box="[194,256,312,337]" name="China" pageId="109" pageNumber="126">China</collectingCountry>
|
||
</emphasis>
|
||
,
|
||
<collectingMunicipality id="6BADACD15574FF95526C3813FE40FEE9" box="[270,402,312,337]" pageId="109" pageNumber="126">Daxinganling</collectingMunicipality>
|
||
, obtained from soil,
|
||
<date id="FFC8106B5574FF9551023813FD19FEE9" box="[608,715,312,337]" pageId="109" pageNumber="126" value="2015-08">
|
||
<collectingDate id="EF8CE9835574FF9551023813FD19FEE9" box="[608,715,312,337]" pageId="109" pageNumber="126" value="2015-08">Aug. 2015</collectingDate>
|
||
</date>
|
||
,
|
||
<collectorName id="2683537D5574FF9551B43813FF01FEC9" pageId="109" pageNumber="126">Q.- M. Wang</collectorName>
|
||
(
|
||
<emphasis id="B902EAB95574FF9553813873FE93FEC9" bold="true" box="[227,321,344,369]" pageId="109" pageNumber="126">
|
||
<typeStatus id="54CD88095574FF9553813873FE93FEC9" box="[227,321,344,369]" pageId="109" pageNumber="126">holotype</typeStatus>
|
||
</emphasis>
|
||
<accessionNumber id="9425AB485574FF9552283873FE27FEDC" box="[330,501,337,369]" pageId="109" pageNumber="126">
|
||
CGMCC 2.5820
|
||
<superScript id="7C039BE35574FF955289387AFE27FEDC" attach="left" box="[491,501,337,356]" fontSize="7" pageId="109" pageNumber="126">T</superScript>
|
||
</accessionNumber>
|
||
preserved in a metabolically inactive state, ex-type CBS 15572 = 03-1).
|
||
</materialsCitation>
|
||
</paragraph>
|
||
</subSubSection>
|
||
<subSubSection id="C36C65205574FF9553153883FD25FDB8" pageId="109" pageNumber="126" type="discussion">
|
||
<paragraph id="8BC936AB5574FF9553153883FD25FDB8" blockId="109.[119,759,424,512]" pageId="109" pageNumber="126">
|
||
<emphasis id="B902EAB95574FF9553153883FF76FE79" box="[119,164,424,449]" italics="true" pageId="109" pageNumber="126">Note</emphasis>
|
||
: The genus
|
||
<taxonomicName id="4C764D285574FF9552793883FE7AFE79" box="[283,424,424,449]" class="Microbotryomycetes" family="Kriegeriaceae" genus="Yamadamyces" higherTaxonomySource="CoL,GBIF" kingdom="Fungi" order="Kriegeriales" pageId="109" pageNumber="126" phylum="Basidiomycota" rank="genus">
|
||
<emphasis id="B902EAB95574FF9552793883FE7AFE79" box="[283,424,424,449]" italics="true" pageId="109" pageNumber="126">Yamadamyces</emphasis>
|
||
</taxonomicName>
|
||
was invalidly published because its type species was based on an invalid name (Art. 40.1, ICN Shenzhen Code),thus it was validated in the Validated Taxa section.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |