215 lines
18 KiB
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215 lines
18 KiB
XML
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<mods:title id="C6E1BE4005501387F2AF3437AE933032">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="2FD49DCE9F4ACAFD616506EEFEB5026B">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="15D4D3E864D194FE5E86510AF2458B67">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="AF1C3F53F462A12599E113C5F6F70AD4">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="97B722526193066C2C20B7AD883B28C3">Pot, Bruno</mods:namePart>
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<mods:namePart id="FD988ED38773FAC973EE43D4B87E83FB">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="360CE56C150EB9FD442CBD368B357712">Wuyts, Sander</mods:namePart>
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<mods:namePart id="FD888701452FA5EA61C8789733618DC9">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="EB08988F8231741443350A9B7B4128A2">Gänzle, Michael G.</mods:namePart>
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<mods:namePart id="E6E3085A82628FB6935618D7A5508863">Lebeer, Sarah</mods:namePart>
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<mods:title id="C8870583909A2BE6A963710B6BF298DE">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:date id="2784B37DF37232F473B8CB6A8EAAFB57">2020</mods:date>
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<mods:number id="FD414CA185C7B2C499CC455CC229E8BD">2020-04-01</mods:number>
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<mods:number id="964940422A86ADD0AC3CB6EA208D8980">70</mods:number>
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<treatment id="0389878AFFA1215DD94EF99EFA806311" ID-DOI="http://doi.org/10.5281/zenodo.6309887" ID-Zenodo-Dep="6309887" LSID="urn:lsid:plazi:treatment:0389878AFFA1215DD94EF99EFA806311" httpUri="http://treatment.plazi.org/id/0389878AFFA1215DD94EF99EFA806311" lastPageNumber="2826" pageId="44" pageNumber="2826">
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<subSubSection id="C33A6517FFA1215DD94EF99EFD8A642C" pageId="44" pageNumber="2826" type="nomenclature">
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<paragraph id="8B9F369CFFA1215DD94EF99EFD8A642C" blockId="44.[120,766,1544,1956]" pageId="44" pageNumber="2826">
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<heading id="D0D781F0FFA1215DD94EF99EFD8A642C" allCaps="true" bold="true" fontSize="12" level="2" pageId="44" pageNumber="2826" reason="3">
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<emphasis id="B954EA8EFFA1215DD94EF99EFD8A642C" bold="true" pageId="44" pageNumber="2826">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFFA1215DD845F99EFED7642C" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Lactiplantibacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="44" pageNumber="2826" phylum="Firmicutes" rank="species" species="fabifermentans" status="comb. nov.">
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<emphasis id="B954EA8EFFA1215DD845F99EFED7642C" bold="true" italics="true" pageId="44" pageNumber="2826">LACTIPLANTIBACILLUS FABIFERMENTANS</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A26757F5FFA1215DD8B7F9B8FD8A642C" box="[384,549,1582,1611]" pageId="44" pageNumber="2826" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</paragraph>
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<subSubSection id="C33A6517FFA1215DD94EF9CEFDBF64CA" pageId="44" pageNumber="2826" type="etymology">
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<paragraph id="8B9F369CFFA1215DD94EF9CEFDBF64CA" blockId="44.[120,766,1544,1956]" pageId="44" pageNumber="2826">
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<taxonomicName id="4C204D1FFFA1215DD94EF9CEFE736417" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[121,476,1624,1648]" class="Bacilli" family="Lactobacillaceae" genus="Lactiplantibacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="44" pageNumber="2826" phylum="Firmicutes" rank="species" species="fabifermentans">
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<emphasis id="B954EA8EFFA1215DD94EF9CEFE736417" box="[121,476,1624,1648]" italics="true" pageId="44" pageNumber="2826">Lactiplantibacillus fabifermentans</emphasis>
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(fa.bi.fer.men’tans. L. fem. n.
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<emphasis id="B954EA8EFFA1215DD9A5F9E1FF1064E8" box="[146,191,1655,1679]" italics="true" pageId="44" pageNumber="2826">faba</emphasis>
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a bean; L. pres. part.
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<emphasis id="B954EA8EFFA1215DD8AEF9E1FDA264E8" box="[409,525,1655,1679]" italics="true" pageId="44" pageNumber="2826">fermentans</emphasis>
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fermenting; N.L. part. adj.
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<taxonomicName id="4C204D1FFFA1215DD993F903FEEF64CA" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[164,320,1685,1709]" class="Bacilli" family="Lactobacillaceae" genus="Lactiplantibacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="44" pageNumber="2826" phylum="Firmicutes" rank="species" species="fabifermentans">
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<emphasis id="B954EA8EFFA1215DD993F903FEEF64CA" box="[164,320,1685,1709]" italics="true" pageId="44" pageNumber="2826">fabifermentans</emphasis>
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</taxonomicName>
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fermenting beans).
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<paragraph id="8B9F369CFFA1215DD94EF952FF086488" blockId="44.[120,766,1544,1956]" pageId="44" pageNumber="2826">
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Basonym:
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<taxonomicName id="4C204D1FFFA1215DD9D1F955FD5B64BB" authority="De Bruyne et al. 2009" authorityName="De Bruyne" authorityYear="2009" box="[230,756,1731,1756]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="44" pageNumber="2826" phylum="Firmicutes" rank="species" species="fabifermentans">
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<emphasis id="B954EA8EFFA1215DD9D1F955FDA164BC" box="[230,526,1731,1755]" italics="true" pageId="44" pageNumber="2826">Lactobacillus fabifermentans</emphasis>
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De Bruyne
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<emphasis id="B954EA8EFFA1215DDBBEF952FD1C64BC" box="[649,691,1731,1755]" italics="true" pageId="44" pageNumber="2826">et al</emphasis>
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. 2009
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</taxonomicName>
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, 10
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<superScript id="7C559BD4FFA1215DD9A4F977FF086488" attach="left" box="[147,167,1761,1775]" fontSize="6" pageId="44" pageNumber="2826">VP</superScript>
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<paragraph id="8B9F369CFFA1215DD94EF886FDB165C4" blockId="44.[120,766,1544,1956]" pageId="44" pageNumber="2826">
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Cells are non-motile long rods, usually singly, in pairs or in short chains. Colonies are circular with a convex elevation and an entire margin. They grow at 37 °C, pH 3.9 and with 6 % NaCl [
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<bibRefCitation id="EFB14B6DFFA1215DD9E2F8FBFEAD65E2" author="De Bruyne K & Camu N & De Vuyst L & Vandamme P." box="[213,258,1901,1925]" pageId="44" pageNumber="2826" pagination="7 - 12" refId="ref68477" refString="198. De Bruyne K, Camu N, De Vuyst L, Vandamme P. Lactobacillus fabifermentans sp. nov. and Lactobacillus cacaonum sp. nov., isolated from Ghanaian cocoa fermentations. Int J Syst Evol Microbiol 2009; 59: 7 - 12." type="journal article" year="2009">198</bibRefCitation>
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]. The genome size of the
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strain is 3.28 Mbp. The mol% G+C content of DNA is 45.0.
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</paragraph>
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<paragraph id="8B9F369CFFA1215DDA0BFF21FBD1628A" blockId="44.[828,1467,183,375]" pageId="44" pageNumber="2826">Isolated from cocoa bean heap fermentation, fermented grapes, and fermented cereals.</paragraph>
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The
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<typeStatus id="549B883EFFA1215DDA5DFE92FC37637B" box="[874,920,260,284]" pageId="44" pageNumber="2826">type</typeStatus>
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strain is R-34115
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=
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<collectionCode id="ED31AE59FFA1215DDD41FE95FB01637C" box="[1142,1198,259,283]" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="44" pageNumber="2826">DSM</collectionCode>
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||
21115
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||
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<collectionCode id="ED31AE59FFA1215DDDC4FE94FB526377" box="[1267,1277,258,272]" name="Tavera, Department of Geology and Geophysics" pageId="44" pageNumber="2826">T</collectionCode>
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</superScript>
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||
=
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||
<collectionCode id="ED31AE59FFA1215DDC2EFE95FAFD637C" box="[1305,1362,259,283]" country="Belgium" httpUri="http://grbio.org/cool/0fkg-rcci" name="Belgian Coordinated Collections of Microorganisms/ LMG Bacteria Collection" pageId="44" pageNumber="2826">LMG</collectionCode>
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||
24284
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<superScript id="7C559BD4FFA1215DDCAFFE94FA0F6377" attach="none" box="[1432,1440,258,272]" fontSize="6" pageId="44" pageNumber="2826">
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</superScript>
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</materialsCitation>
|
||
.
|
||
</paragraph>
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||
</subSubSection>
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||
<subSubSection id="C33A6517FFA1215DDA0BFEA7FA2C632E" box="[828,1411,305,329]" pageId="44" pageNumber="2826" type="description">
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<paragraph id="8B9F369CFFA1215DDA0BFEA7FA2C632E" blockId="44.[828,1467,183,375]" box="[828,1411,305,329]" pageId="44" pageNumber="2826">Genome sequence accession number: AYGX00000000.</paragraph>
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||
</subSubSection>
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||
<subSubSection id="C33A6517FFA1215DDA0BFEC9FA806311" box="[828,1327,350,375]" pageId="44" pageNumber="2826" type="materials_examined">
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<paragraph id="8B9F369CFFA1215DDA0BFEC9FA806311" blockId="44.[828,1467,183,375]" box="[828,1327,350,375]" pageId="44" pageNumber="2826">
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||
16S rRNA gene accession number:
|
||
<accessionNumber id="9473AB7FFFA1215DDD86FEC8FA846311" box="[1201,1323,350,374]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AM905388" pageId="44" pageNumber="2826">
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<collectionCode id="ED31AE59FFA1215DDD86FEC8FB736311" box="[1201,1244,350,374]" country="Australia" name="Australian Museum" pageId="44" pageNumber="2826" type="Museum">AM</collectionCode>
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||
905388
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||
</accessionNumber>
|
||
.
|
||
</paragraph>
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||
</subSubSection>
|
||
</treatment>
|
||
</document> |