167 lines
10 KiB
XML
167 lines
10 KiB
XML
<document ID-DOI="http://dx.doi.org/10.3897/mycokeys.33.23670" ID-GBIF-Dataset="42cbc858-8729-4618-9467-590ea7ca068e" ID-PMC="PMC6283267" ID-Pensoft-Pub="1314-4049-33-25" ID-PubMed="30532625" ModsDocAuthor="" ModsDocDate="2018" ModsDocID="1314-4049-33-25" ModsDocOrigin="MycoKeys 33" ModsDocTitle="Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand" checkinTime="1522305991188" checkinUser="pensoft" docAuthor="Tibpromma, Saowaluck, Hyde, Kevin D., Bhat, Jayarama D., Mortimer, Peter E., Xu, Jianchu, Promputtha, Itthayakorn, Doilom, Mingkwan, Yang, Jun-Bo, Tang, Alvin M. C. & Karunarathna, Samantha C." docDate="2018" docId="6B0036C662EF53EDB6ACE5936BFD0234" docLanguage="en" docName="MycoKeys 33: 25-67" docOrigin="MycoKeys 33" docSource="http://dx.doi.org/10.3897/mycokeys.33.23670" docTitle="Endopandanicola thailandica Tibpromma & K. D. Hyde, sp. nov." docType="treatment" docVersion="6" lastPageNumber="32" masterDocId="B85B6F41CC50A742FFD77F5B3B598C43" masterDocTitle="Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand" masterLastPageNumber="67" masterPageNumber="25" pageNumber="31" updateTime="1668135980046" updateUser="ExternalLinkService">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Tibpromma, Saowaluck</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Hyde, Kevin D.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Bhat, Jayarama D.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Mortimer, Peter E.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Xu, Jianchu</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Promputtha, Itthayakorn</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Doilom, Mingkwan</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Yang, Jun-Bo</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Tang, Alvin M. C.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Karunarathna, Samantha C.</mods:namePart>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>MycoKeys</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2018</mods:date>
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<mods:detail type="volume">
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<mods:number>33</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>25</mods:start>
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<mods:end>67</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.3897/mycokeys.33.23670</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">http://dx.doi.org/10.3897/mycokeys.33.23670</mods:identifier>
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<mods:identifier type="Pensoft-Pub">1314-4049-33-25</mods:identifier>
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</mods:mods>
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<treatment ID-GBIF-Taxon="142664165" LSID="urn:lsid:plazi:treatment:6B0036C662EF53EDB6ACE5936BFD0234" httpUri="http://treatment.plazi.org/id/6B0036C662EF53EDB6ACE5936BFD0234" lastPageId="7" lastPageNumber="32" pageId="6" pageNumber="31">
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<subSubSection pageId="6" pageNumber="31" type="nomenclature">
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<paragraph pageId="6" pageNumber="31">
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<taxonomicName LSID=" MB823836" authority="Tibpromma & K. D. Hyde" class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola thailandica" order="Polyporales" pageId="6" pageNumber="31" phylum="Basidiomycota" rank="species" species="thailandica">
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<pageBreakToken pageId="6" pageNumber="31" start="start">Endopandanicola</pageBreakToken>
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thailandica Tibpromma & K.D. Hyde
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</taxonomicName>
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<taxonomicNameLabel pageId="6" pageNumber="31">sp. nov.</taxonomicNameLabel>
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Figure 4
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</paragraph>
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</subSubSection>
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<subSubSection pageId="6" pageNumber="31" type="etymology">
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<paragraph pageId="6" pageNumber="31">Etymology.</paragraph>
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<paragraph pageId="6" pageNumber="31">named after Thailand, the country where the fungus was first discovered.</paragraph>
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</subSubSection>
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<subSubSection pageId="6" pageNumber="31" type="holotype">
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<paragraph pageId="6" pageNumber="31">Holotype.</paragraph>
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<paragraph pageId="6" pageNumber="31">MFLU 18-0021</paragraph>
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</subSubSection>
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<subSubSection pageId="6" pageNumber="31" type="description">
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<paragraph pageId="6" pageNumber="31">Culture characteristics.</paragraph>
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<paragraph pageId="6" pageNumber="31">
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<taxonomicName genus="Colonies" lsidName="Colonies" pageId="6" pageNumber="31" rank="genus">Colonies</taxonomicName>
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on PDA (Figure 2 PE10, FE42, FE43, FE46 and PE60), superficial, initially white, later becoming yellow-white, irregular, with undulate margin, smooth with flossy to velvety; reverse white to yellow-white. Generative hyphae simple-septate, branched, with clamp connections, sub-hyaline, thin-walled, 1.5-3.5
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<normalizedToken originalValue="µm">µm</normalizedToken>
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wide.
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</paragraph>
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<caption pageId="6" pageNumber="31">
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<paragraph pageId="6" pageNumber="31">Figure 2. All cultures from this study are grown on PDA at room temperature after 7 days (original codes are written at the bottom of each picture).</paragraph>
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</caption>
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</subSubSection>
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<subSubSection pageId="6" pageNumber="31" type="materials_examined">
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<paragraph pageId="6" pageNumber="31">Material examined.</paragraph>
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<paragraph pageId="6" pageNumber="31">
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THAILAND, Chumphon, Pathio District, on healthy leaves of
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<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="6" pageNumber="31" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
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sp. (
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<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="6" pageNumber="31" rank="family">Pandanaceae</taxonomicName>
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), 1 December 2016, S. Tibpromma PE60 (MFLU 18-0021, holotype); HKAS100856, paratype, ex-type living cultures, MFLUCC 17-0600 = KUMCC 17-0295; Chumphon, Pathio District, 1 December 2016, S. Tibpromma PE10, living culture, MFLUCC 17-0572; Ranong, Muang, Muang District, 3 December 2016, S. Tibpromma FE42, living culture, MFLUCC 17-0548; FE43, living culture, MFLUCC 17-0549 = KUMCC 17-0264; FE46, living culture, MFLUCC 17-0551 = KUMCC 17-0265.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="6" pageNumber="31" type="genbank numbers">
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<paragraph pageId="6" pageNumber="31">GenBank numbers.</paragraph>
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<paragraph pageId="6" pageNumber="31">ITS; MFLUCC 17-0545=MG646961, MFLUCC 17-0548=MG646964, MFLUCC 17-0549=MG646963, MFLUCC 17-0551=MG646962, MFLUCC 17-0572=MG646959, MFLUCC 17-0600=MG646960.</paragraph>
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</subSubSection>
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<subSubSection pageId="7" pageNumber="32" type="notes">
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<paragraph pageId="7" pageNumber="32">
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<pageBreakToken pageId="7" pageNumber="32" start="start">Notes</pageBreakToken>
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.
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</paragraph>
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<paragraph pageId="7" pageNumber="32">
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<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="genus">Endopandanicola</taxonomicName>
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is introduced and typified by
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<taxonomicName lsidName="En. thailandica" pageId="7" pageNumber="32" rank="species" species="thailandica">En. thailandica</taxonomicName>
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which is represented by six isolates and is described as a novel species based on its asexual morph. The phylogenetic analysis of ITS sequence data showed that this species clustered together with
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<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Panus" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Panus" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="genus">Panus</taxonomicName>
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, but there is a high level of statistical support for its separation (100% in ML, 100% in MP) (Figure 3).
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</paragraph>
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<caption pageId="7" pageNumber="32">
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<paragraph pageId="7" pageNumber="32">
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Figure 3. Phylogram generated from maximum likelihood analysis based on ITS sequence data. Maximum parsimony (left) and maximum likelihood (right) bootstrap support values are given above/below the nodes. The newly generated sequences are in red text. The tree is rooted with
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<taxonomicName class="Agaricomycetes" family="Meruliaceae" genus="Pirex" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Pirex concentricus" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="concentricus">Pirex concentricus</taxonomicName>
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.
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</paragraph>
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</caption>
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<caption pageId="7" pageNumber="32">
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<paragraph pageId="7" pageNumber="32">
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Figure 4.
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<taxonomicName class="Agaricomycetes" family="Polyporaceae" genus="Endopandanicola" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endopandanicola thailandica" order="Polyporales" pageId="7" pageNumber="32" phylum="Basidiomycota" rank="species" species="thailandica">Endopandanicola thailandica</taxonomicName>
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(MFLU 18-0021, holotype). a Mycelia masses b, c Clamp connections. Scale bars: 10
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<normalizedToken originalValue="μm">μm</normalizedToken>
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(a), 5
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<normalizedToken originalValue="μm">μm</normalizedToken>
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(b, c).
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</paragraph>
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</caption>
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</subSubSection>
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</treatment>
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</document> |