198 lines
20 KiB
XML
198 lines
20 KiB
XML
<document id="E8A3A62F45B4C29CBBFBAA9A029B857E" ID-DOI="10.5281/zenodo.196005" ID-GBIF-Dataset="4a013300-d475-4db9-a5cf-bff30510ac4a" ID-ISSN="1175-5326" ID-Zenodo-Dep="196005" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1460236580651" checkinUser="plazi" docAuthor="Castiglia, Riccardo, Annesi, Flavia, Bezerra, Alexandra M. R., García, Andrés & Flores-Villela, Oscar" docDate="2010" docId="03E2993FFFECF441FF48FF617BECFAC8" docLanguage="en" docName="zt02508p029.pdf" docOrigin="Zootaxa 2508" docStyle="DocumentStyle:890A69B780ED73D6DB8551B71C8AC79E.4:Zootaxa.2009-2012.journal_article" docStyleId="890A69B780ED73D6DB8551B71C8AC79E" docStyleName="Zootaxa.2009-2012.journal_article" docStyleVersion="4" docTitle="Urosaurus bicarinatus Dumeril" docType="treatment" docVersion="8" lastPageNumber="16" masterDocId="FFDBE147FFE3F44EFFDFFFF67F59FFFC" masterDocTitle="Cytotaxonomy and DNA taxonomy of lizards (Squamata, Sauria) from a tropical dry forest in the Chamela-Cuixmala Biosphere Reserve on the coast of Jalisco, Mexico" masterLastPageNumber="29" masterPageNumber="1" pageNumber="16" updateTime="1698239743649" updateUser="plazi">
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<mods:title id="07971BF471964B531A3D54C7D6CF0B0F">Cytotaxonomy and DNA taxonomy of lizards (Squamata, Sauria) from a tropical dry forest in the Chamela-Cuixmala Biosphere Reserve on the coast of Jalisco, Mexico</mods:title>
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<mods:namePart id="19451326AA93B1E9F2A2B686B6EEE8A8">Castiglia, Riccardo</mods:namePart>
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<mods:namePart id="7E7034C161BCD60C03F2552BB03B54A1">Annesi, Flavia</mods:namePart>
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<mods:namePart id="251CD8D226D2F252FC5E1F6A638C6CF8">Bezerra, Alexandra M. R.</mods:namePart>
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<mods:namePart id="53C36E15F936C0D20A6CDB55DF96E399">García, Andrés</mods:namePart>
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<mods:namePart id="B66F6A01AB91A68861ADC59155363DE4">Flores-Villela, Oscar</mods:namePart>
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<mods:title id="00D7A9DD648037B4A47FB185B8BCFD28">Zootaxa</mods:title>
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<mods:date id="D543803FE0F8850F5B83A004F1F8420E">2010</mods:date>
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<mods:detail id="07BAF8693A0B7C21B0FABF17BBB30D1E" type="volume">
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<mods:number id="A574C4D1BC3B953DB2BF2A8FD034302D">2508</mods:number>
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<mods:identifier id="E3F9AB0A79F0A8B8022D257C602426D9" type="DOI">10.5281/zenodo.196005</mods:identifier>
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<mods:identifier id="007950F8C2CF41809E7B5ED94819AC59" type="ISSN">1175-5326</mods:identifier>
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<treatment id="03E2993FFFECF441FF48FF617BECFAC8" ID-DOI="http://doi.org/10.5281/zenodo.6210582" ID-GBIF-Taxon="119388425" ID-Zenodo-Dep="6210582" LSID="urn:lsid:plazi:treatment:03E2993FFFECF441FF48FF617BECFAC8" httpUri="http://treatment.plazi.org/id/03E2993FFFECF441FF48FF617BECFAC8" lastPageNumber="16" pageId="15" pageNumber="16">
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<subSubSection id="C3517BA2FFECF441FF48FF617C15FEE3" pageId="15" pageNumber="16" type="nomenclature">
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<paragraph id="8BF42829FFECF441FF48FF617C7AFF4D" blockId="15.[151,803,151,177]" box="[151,803,151,177]" pageId="15" pageNumber="16">
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<heading id="D0BC9F45FFECF441FF48FF617C7AFF4D" bold="true" box="[151,803,151,177]" fontSize="11" level="1" pageId="15" pageNumber="16" reason="1">
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<emphasis id="B93FF43BFFECF441FF48FF617C7AFF4D" bold="true" box="[151,803,151,177]" pageId="15" pageNumber="16">
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<taxonomicName id="4C4B53AAFFECF441FF48FF617D4EFF4D" authority="Dumeril" authorityName="Dumeril" box="[151,535,151,177]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="bicarinatus">
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<emphasis id="B93FF43BFFECF441FF48FF617EF1FF4D" bold="true" box="[151,424,151,177]" italics="true" pageId="15" pageNumber="16">Urosaurus bicarinatus</emphasis>
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Duméril
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</taxonomicName>
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(Tropical tree lizard)
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</emphasis>
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</heading>
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</paragraph>
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<paragraph id="8BF42829FFECF441FF48FF297C15FEE3" blockId="15.[151,1437,223,1332]" pageId="15" pageNumber="16">
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<emphasis id="B93FF43BFFECF441FF48FF297EC5FF05" bold="true" box="[151,412,223,249]" pageId="15" pageNumber="16">Specimens analysed:</emphasis>
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one male from Chamela (CEAC19), one specimen from Rio Grande, Oaxaca (MZFC 12046), one specimen from Epatlan, Puebla (MZFC 6863).
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</paragraph>
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</subSubSection>
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<subSubSection id="C3517BA2FFECF441FF1BFEDC7AC1FE03" pageId="15" pageNumber="16" type="distribution">
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<paragraph id="8BF42829FFECF441FF1BFEDC7BC9FEB8" blockId="15.[151,1437,223,1332]" box="[196,1168,298,324]" pageId="15" pageNumber="16">
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<emphasis id="B93FF43BFFECF441FF1BFEDC7E3EFEB8" bold="true" box="[196,359,298,324]" pageId="15" pageNumber="16">Distribution:</emphasis>
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Mexican endemic. Pacific coast of
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<collectingCountry id="F35C68B9FFECF441FCD6FEDC7C3FFEB8" box="[777,870,298,324]" name="Mexico" pageId="15" pageNumber="16">Mexico</collectingCountry>
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, from Sonora to Chiapas.
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</paragraph>
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<paragraph id="8BF42829FFECF441FF1BFEB97AC1FE03" blockId="15.[151,1437,223,1332]" pageId="15" pageNumber="16">
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<emphasis id="B93FF43BFFECF441FF1BFEB97E00FE95" bold="true" box="[196,345,335,361]" pageId="15" pageNumber="16">Subspecies:</emphasis>
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<emphasis id="B93FF43BFFECF441FEBDFEA67D68FE95" box="[354,561,336,361]" italics="true" pageId="15" pageNumber="16">
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U. b.
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<taxonomicName id="4C4B53AAFFECF441FE78FEA67D68FE95" box="[423,561,336,361]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="bicarinatus">bicarinatus</taxonomicName>
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</emphasis>
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, distributed from Michoacán to central Guerrero, and in the Río Balsas basin up to Morelos and southern Puebla;
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<emphasis id="B93FF43BFFECF441FD57FE837C20FE72" box="[648,889,373,398]" italics="true" pageId="15" pageNumber="16">U. b. anonymorphus</emphasis>
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, found in east Guerrero, Oaxaca, and possibly western Chiapas;
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<emphasis id="B93FF43BFFECF441FEADFE6C7D56FE4F" box="[370,527,410,435]" italics="true" pageId="15" pageNumber="16">U. b. nelsoni</emphasis>
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, localized in northern Oaxaca;
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<emphasis id="B93FF43BFFECF441FC4BFE6C7B2BFE4F" box="[916,1138,410,435]" italics="true" pageId="15" pageNumber="16">U. b. tuberculatus</emphasis>
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, distributed in Southern Sonora southward to Jalisco and Colima with isolated populations in Sinaloa;
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<emphasis id="B93FF43BFFECF441FB4BFE367A14FE25" box="[1172,1357,448,473]" italics="true" pageId="15" pageNumber="16">U. b. spinosus</emphasis>
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, from southwestern Chiapas. However,
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<bibRefCitation id="EFDA55D8FFECF441FDC0FE137DE7FE03" author="Wiens" box="[543,702,485,511]" pageId="15" pageNumber="29" refString="Wiens, J. J. (1993) Phylogenetic Systematics of the Tree Lizards (genus Urosaurus). Herpetologica, 49, 399 - 420." type="journal article" year="1993">Wiens (1993)</bibRefCitation>
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did not find morphological differences among the subspecies.
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</paragraph>
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</subSubSection>
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<subSubSection id="C3517BA2FFECF441FF1BFDFC7BECFAC8" pageId="15" pageNumber="16" type="description">
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<paragraph id="8BF42829FFECF441FF1BFDFC7BC0FDD8" blockId="15.[151,1437,223,1332]" box="[196,1177,522,548]" pageId="15" pageNumber="16">
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<emphasis id="B93FF43BFFECF441FF1BFDFC7E0AFDD8" bold="true" box="[196,339,522,548]" pageId="15" pageNumber="16">Karyotype:</emphasis>
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Unfortunately, we did not obtained good metaphases from this species.
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</paragraph>
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<paragraph id="8BF42829FFECF441FF1BFDD97A48FBD3" blockId="15.[151,1437,223,1332]" pageId="15" pageNumber="16">
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<emphasis id="B93FF43BFFECF441FF1BFDD97ECBFDB5" bold="true" box="[196,402,559,585]" pageId="15" pageNumber="16">DNA taxonomy:</emphasis>
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There is no sequence deposited in GenBank for this species. The available rDNA 16S sequences in GenBank are for
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<taxonomicName id="4C4B53AAFFECF441FE22FDA37D23FD92" box="[509,634,597,622]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="ornatus">
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<emphasis id="B93FF43BFFECF441FE22FDA37D23FD92" box="[509,634,597,622]" italics="true" pageId="15" pageNumber="16">U. ornatus</emphasis>
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</taxonomicName>
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,
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<taxonomicName id="4C4B53AAFFECF441FD56FDA37C60FD92" box="[649,825,597,622]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="nigricaudus">
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<emphasis id="B93FF43BFFECF441FD56FDA37C60FD92" box="[649,825,597,622]" italics="true" pageId="15" pageNumber="16">U. nigricaudus</emphasis>
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</taxonomicName>
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,
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<taxonomicName id="4C4B53AAFFECF441FC97FDA37B56FD92" box="[840,1039,597,622]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="microscutatus">
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<emphasis id="B93FF43BFFECF441FC97FDA37B56FD92" box="[840,1039,597,622]" italics="true" pageId="15" pageNumber="16">U. microscutatus</emphasis>
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</taxonomicName>
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, and
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<taxonomicName id="4C4B53AAFFECF441FB90FDA37AC1FD93" authority="Reeder 1995" authorityName="Reeder" authorityYear="1995" box="[1103,1432,597,623]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="graciosus">
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<emphasis id="B93FF43BFFECF441FB90FDA37BBCFD92" box="[1103,1253,597,622]" italics="true" pageId="15" pageNumber="16">U. graciosus</emphasis>
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(
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<bibRefCitation id="EFDA55D8FFECF441FB2BFDA37AD6FD93" author="Reeder" box="[1268,1423,597,623]" pageId="15" pageNumber="29" refString="Reeder, T. W. (1995) Phylogenetic relationships among phrynosomatid lizards as inferred from mitochondrial ribosomal DNA sequences: substitutional bias and information content of transitions relative to transversions. Molecular Phylogenetics and Evolution, 4, 203 - 222." type="journal article" year="1995">Reeder 1995</bibRefCitation>
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)
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</taxonomicName>
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. We aligned these sequences with the sequence of
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<taxonomicName id="4C4B53AAFFECF441FCFBFD8C7CBBFD6F" box="[804,994,634,659]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="bicarinatus">
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<emphasis id="B93FF43BFFECF441FCFBFD8C7CBBFD6F" box="[804,994,634,659]" italics="true" pageId="15" pageNumber="16">U. bicarinatus</emphasis>
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</taxonomicName>
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from Chamela belonging to
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<emphasis id="B93FF43BFFECF441FA83FD8C7E73FD45" italics="true" pageId="15" pageNumber="16">U. b. tuberculatus</emphasis>
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and with sequences from two additional individuals (Rio Grande, Oaxaca and Epatlan, Puebla) possibly belonging to
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<emphasis id="B93FF43BFFECF441FE41FD337D6EFD22" box="[414,567,709,734]" italics="true" pageId="15" pageNumber="16">U. b. nelsoni</emphasis>
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and performed a phylogenetic analysis using
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<taxonomicName id="4C4B53AAFFECF441FB86FD337A09FD22" box="[1113,1360,709,734]" class="Reptilia" family="Phrynosomatidae" genus="Sceloporus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="utiformis">
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<emphasis id="B93FF43BFFECF441FB86FD337A09FD22" box="[1113,1360,709,734]" italics="true" pageId="15" pageNumber="16">Sceloporus utiformis</emphasis>
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</taxonomicName>
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as the outgroup. The obtained tree is shown in
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<figureCitation id="137034ACFFECF441FDABFD1C7D80FCF8" box="[628,729,746,772]" captionStart="FIGURE 8" captionStartId="14.[151,257,1441,1465]" captionTargetBox="[226,1361,975,1406]" captionTargetId="figure@14.[174,1412,927,1420]" captionTargetPageId="14" captionText="FIGURE 8. Neighbour-Joining tree of 16 S rDNA haplotypes (455 bp) of Urosaurus species. Bootstrap values (%) obtained by the NJ, ML and MP are shown. The substitution model selected for ML was Tamura-Nei model (Tamura & Nei 1993) with rate variation among sites (+ G), and a gamma distribution shape parameter of 0.0855." httpUri="https://zenodo.org/record/196014/files/figure.png" pageId="15" pageNumber="16">Figure 8</figureCitation>
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. Interestingly, the phylogenetic relationships among species are different from those identified using morphological characters by
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<bibRefCitation id="EFDA55D8FFECF441FC02FCE67BD9FCD6" author="Wiens" box="[989,1152,784,810]" pageId="15" pageNumber="29" refString="Wiens, J. J. (1993) Phylogenetic Systematics of the Tree Lizards (genus Urosaurus). Herpetologica, 49, 399 - 420." type="journal article" year="1993">Wiens (1993)</bibRefCitation>
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and are congruent with Reeder’s (1995) results. Molecular analysis shows that
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<taxonomicName id="4C4B53AAFFECF441FCFEFCC37C93FCB2" box="[801,970,821,846]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="bicarinatus">
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<emphasis id="B93FF43BFFECF441FCFEFCC37C93FCB2" box="[801,970,821,846]" italics="true" pageId="15" pageNumber="16">U. bicarinatus</emphasis>
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</taxonomicName>
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has an external position with respect to the other species, which form a monophyletic group (supported only by NJ, 62%). Moreover in our tree
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<taxonomicName id="4C4B53AAFFECF441FAA0FCAC7FAEFC65" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="ornatus">
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<emphasis id="B93FF43BFFECF441FAA0FCAC7FAEFC65" italics="true" pageId="15" pageNumber="16">U. ornatus</emphasis>
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</taxonomicName>
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is clearly the sister species of
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<taxonomicName id="4C4B53AAFFECF441FDA3FC767C44FC65" box="[636,797,896,921]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="graciosus">
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<emphasis id="B93FF43BFFECF441FDA3FC767C44FC65" box="[636,797,896,921]" italics="true" pageId="15" pageNumber="16">U. graciosus</emphasis>
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</taxonomicName>
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(supported by 87–99%). Conversely, phylogenetic relationships based on morphological characters show that
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<taxonomicName id="4C4B53AAFFECF441FCBFFC537CA3FC42" box="[864,1018,933,958]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="graciosus">
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<emphasis id="B93FF43BFFECF441FCBFFC537CA3FC42" box="[864,1018,933,958]" italics="true" pageId="15" pageNumber="16">U. graciosus</emphasis>
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</taxonomicName>
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was external to
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<taxonomicName id="4C4B53AAFFECF441FB1EFC537A36FC42" box="[1217,1391,933,958]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="bicarinatus">
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<emphasis id="B93FF43BFFECF441FB1EFC537A36FC42" box="[1217,1391,933,958]" italics="true" pageId="15" pageNumber="16">U. bicarinatus</emphasis>
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</taxonomicName>
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,
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<taxonomicName id="4C4B53AAFFECF441FAA0FC537E7FFC1F" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="nigricaudus">
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<emphasis id="B93FF43BFFECF441FAA0FC537E7FFC1F" italics="true" pageId="15" pageNumber="16">U. nigricaudus</emphasis>
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</taxonomicName>
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,
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<taxonomicName id="4C4B53AAFFECF441FEEAFC3C7EEFFC1F" box="[309,438,970,995]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="ornatus">
|
||
<emphasis id="B93FF43BFFECF441FEEAFC3C7EEFFC1F" box="[309,438,970,995]" italics="true" pageId="15" pageNumber="16">U. ornatus</emphasis>
|
||
</taxonomicName>
|
||
and
|
||
<taxonomicName id="4C4B53AAFFECF441FE2DFC3C7C30FC18" authority="Wiens 1993" authorityName="Wiens" authorityYear="1993" box="[498,873,970,996]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="microscutatus">
|
||
<emphasis id="B93FF43BFFECF441FE2DFC3C7DE7FC1F" box="[498,702,970,995]" italics="true" pageId="15" pageNumber="16">U. microscutatus</emphasis>
|
||
(
|
||
<bibRefCitation id="EFDA55D8FFECF441FD11FC3C7C39FC18" author="Wiens" box="[718,864,970,996]" pageId="15" pageNumber="29" refString="Wiens, J. J. (1993) Phylogenetic Systematics of the Tree Lizards (genus Urosaurus). Herpetologica, 49, 399 - 420." type="journal article" year="1993">Wiens 1993</bibRefCitation>
|
||
)
|
||
</taxonomicName>
|
||
. The topology obtained with molecular data is congruent with the distribution of the species.
|
||
<taxonomicName id="4C4B53AAFFECF441FD66FC067C3BFBF5" box="[697,866,1008,1033]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="bicarinatus">
|
||
<emphasis id="B93FF43BFFECF441FD66FC067C3BFBF5" box="[697,866,1008,1033]" italics="true" pageId="15" pageNumber="16">U. bicarinatus</emphasis>
|
||
</taxonomicName>
|
||
is nested in the southern part of the range of the genus while the other species, which cluster together in the tree, are localized in the northern part.
|
||
</paragraph>
|
||
<paragraph id="8BF42829FFECF441FF1BFBCC7BECFAC8" blockId="15.[151,1437,223,1332]" pageId="15" pageNumber="16">
|
||
The highest interspecific distance has been found between
|
||
<taxonomicName id="4C4B53AAFFECF441FC46FBCC7B13FBAF" box="[921,1098,1082,1107]" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="bicarinatus">
|
||
<emphasis id="B93FF43BFFECF441FC46FBCC7B13FBAF" box="[921,1098,1082,1107]" italics="true" pageId="15" pageNumber="16">U. bicarinatus</emphasis>
|
||
</taxonomicName>
|
||
and the other species (8.4– 9.4%), while lower values have been found between the other species (3.5–7.7%). A low divergence value (1.8%) was found between sequences of the Rio Grande (Oaxaca) and Epatlan (Puebla) populations of
|
||
<taxonomicName id="4C4B53AAFFECF441FAA0FB737E44FB38" class="Reptilia" family="Phrynosomatidae" genus="Urosaurus" kingdom="Animalia" order="Squamata" pageId="15" pageNumber="16" phylum="Chordata" rank="species" species="bicarinatus">
|
||
<emphasis id="B93FF43BFFECF441FAA0FB737E44FB38" italics="true" pageId="15" pageNumber="16">U. bicarinatus</emphasis>
|
||
</taxonomicName>
|
||
. Greater distance was found between these two localities and the sequences from Chamela (4.3– 4.5%) belonging to a different subspecies. In the absence of additional data, it is very difficult to infer a conclusion regarding the taxonomic status of the Chamela population. These findings suggest that a complete intra and interspecific revision of the genus is needed using additional molecular markers.
|
||
</paragraph>
|
||
</subSubSection>
|
||
</treatment>
|
||
</document> |