252 lines
23 KiB
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252 lines
23 KiB
XML
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<mods:title id="1CE2F88C8E3A02DA2CC61EA3CB62A444">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="47456F904D4B09E82153FDA8C7288256">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="832380304CFF7E859642847A344226C7">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="EE6422500B340C35A6C499136C9C3B75">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="6EAAA35F242EF534049233C5584B4B18">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="3F417D8160A46085E15C370CB0DCF546">Pot, Bruno</mods:namePart>
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<mods:namePart id="E2BEAC2871EB2F75EAC50F671F96E4B7">Walter, Jens</mods:namePart>
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<mods:namePart id="D916A58BF2038382436F222EBC9EFB00">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="3C2C1E953D7F251CAEA4F6BD775EBDB4">Felis, Giovanna E.</mods:namePart>
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<mods:title id="E99ACCBD5F826A4B7F0CA507416F74AC">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:date id="6073987A6B01EB7A82E9FD29A197FE75">2020</mods:date>
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<mods:number id="3B0785AA4F854E8A5D2506A47AFBAA4C">70</mods:number>
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<treatment id="0389878AFF96216ADA0BFC0DFAA464A5" ID-DOI="http://doi.org/10.5281/zenodo.6309676" ID-Zenodo-Dep="6309676" LSID="urn:lsid:plazi:treatment:0389878AFF96216ADA0BFC0DFAA464A5" httpUri="http://treatment.plazi.org/id/0389878AFF96216ADA0BFC0DFAA464A5" lastPageNumber="2809" pageId="27" pageNumber="2809">
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<heading id="D0D781F0FF96216ADA0BFC0DFB0A61BA" allCaps="true" bold="true" fontSize="12" level="2" pageId="27" pageNumber="2809" reason="3">
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<emphasis id="B954EA8EFF96216ADA0BFC0DFB0A61BA" bold="true" pageId="27" pageNumber="2809">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFF96216ADD02FC0DFC5761BA" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Lapidilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="27" pageNumber="2809" phylum="Firmicutes" rank="species" species="dextrinicus" status="comb. nov.">
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<emphasis id="B954EA8EFF96216ADD02FC0DFC5761BA" bold="true" italics="true" pageId="27" pageNumber="2809">LAPIDILACTOBACILLUS DEXTRINICUS</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A26757F5FF96216ADD37FC56FB0A61BA" box="[1024,1189,960,989]" pageId="27" pageNumber="2809" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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<subSubSection id="C33A6517FF96216ADA0BFC7CFA166658" pageId="27" pageNumber="2809" type="etymology">
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<paragraph id="8B9F369CFF96216ADA0BFC7CFA166658" blockId="27.[826,1468,923,1730]" pageId="27" pageNumber="2809">
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<taxonomicName id="4C204D1FFF96216ADA0BFC7CFB2D6665" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[828,1154,1002,1026]" class="Bacilli" family="Lactobacillaceae" genus="Lapidilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="27" pageNumber="2809" phylum="Firmicutes" rank="species" species="dextrinicus">
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<emphasis id="B954EA8EFF96216ADA0BFC7CFB2D6665" box="[828,1154,1002,1026]" italics="true" pageId="27" pageNumber="2809">Lapidilactobacillus dextrinicus</emphasis>
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</taxonomicName>
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(dex.tri′ ni.cus. N.L. neut. n.
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<emphasis id="B954EA8EFF96216ADA09FB9EFC056647" box="[830,938,1032,1056]" italics="true" pageId="27" pageNumber="2809">dextrinum</emphasis>
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, dextrin; L. suff. -
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<emphasis id="B954EA8EFF96216ADD54FB9FFB236647" box="[1123,1164,1033,1056]" italics="true" pageId="27" pageNumber="2809">icus</emphasis>
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, suffix used with the sense of belonging to; N.L. masc. adj.
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<taxonomicName id="4C204D1FFF96216ADD46FBB1FB4A6658" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[1137,1253,1063,1087]" class="Bacilli" family="Lactobacillaceae" genus="Lapidilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="27" pageNumber="2809" phylum="Firmicutes" rank="species" species="dextrinicus">
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<emphasis id="B954EA8EFF96216ADD46FBB1FB4A6658" box="[1137,1253,1063,1087]" italics="true" pageId="27" pageNumber="2809">dextrinicus</emphasis>
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</taxonomicName>
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, related to dextrin).
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</paragraph>
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<subSubSection id="C33A6517FF96216ADA0BFBC3FB39679B" pageId="27" pageNumber="2809" type="description">
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<paragraph id="8B9F369CFF96216ADA0BFBC3FBC266EC" blockId="27.[826,1468,923,1730]" pageId="27" pageNumber="2809">
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Basonym:
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<taxonomicName id="4C204D1FFF96216ADA9CFBC3FB8A66EB" authority="(Coster and White 1964) Haakensen et al. 2009" authorityName="Haakensen et al." authorityYear="2009" baseAuthorityName="Coster and White" baseAuthorityYear="1964" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="27" pageNumber="2809" phylum="Firmicutes" rank="species" species="dextrinicus">
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<emphasis id="B954EA8EFF96216ADA9CFBC3FB02660A" box="[939,1197,1109,1133]" italics="true" pageId="27" pageNumber="2809">Lactobacillus dextrinicus</emphasis>
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(Coster and White 1964) Haakensen
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<emphasis id="B954EA8EFF96216ADA8FFBE2FC4B66EC" box="[952,996,1139,1163]" italics="true" pageId="27" pageNumber="2809">et al</emphasis>
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. 2009
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</taxonomicName>
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, 620
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<superScript id="7C559BD4FF96216ADD61FBE4FBC766E7" attach="right" box="[1110,1128,1138,1152]" fontSize="6" pageId="27" pageNumber="2809">VP</superScript>
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.
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</paragraph>
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Strains of
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<taxonomicName id="4C204D1FFF96216ADA89FB34FBF566DE" authorityName="Haakensen et al." authorityYear="2009" baseAuthorityName="Coster and White" baseAuthorityYear="1964" box="[958,1114,1185,1209]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="27" pageNumber="2809" phylum="Firmicutes" rank="species" species="dextrinicus">
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<emphasis id="B954EA8EFF96216ADA89FB34FBF566DE" box="[958,1114,1185,1209]" italics="true" pageId="27" pageNumber="2809">L. dextrinicus</emphasis>
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</taxonomicName>
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were previously classified as
|
||
<taxonomicName id="4C204D1FFF96216ADA0BFB56FCC06690" authority="(Coster and White 1964) Back 1978" authorityName="Back" authorityYear="1978" baseAuthorityName="Coster and White" baseAuthorityYear="1964" class="Bacilli" family="Lactobacillaceae" genus="Pediococcus" kingdom="Bacteria" order="Lactobacillales" pageId="27" pageNumber="2809" phylum="Firmicutes" rank="species" species="dextrinicus">
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||
<emphasis id="B954EA8EFF96216ADA0BFB56FB9066BF" box="[828,1087,1216,1240]" italics="true" pageId="27" pageNumber="2809">Pediococcus dextrinicus</emphasis>
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(Coster and White 1964) Back 1978
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</taxonomicName>
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||
(Approved Lists 1980) or
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<taxonomicName id="4C204D1FFF96216ADDBDFB49FC1C6772" class="Bacilli" family="Lactobacillaceae" genus="Pediococcus" kingdom="Bacteria" order="Lactobacillales" pageId="27" pageNumber="2809" phylum="Firmicutes" rank="subSpecies" species="cerevisiae" subSpecies="dextrinicus">
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||
<emphasis id="B954EA8EFF96216ADDBDFB49FADE6691" box="[1162,1393,1247,1271]" italics="true" pageId="27" pageNumber="2809">Pediococcus cerevisiae</emphasis>
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subsp.
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<emphasis id="B954EA8EFF96216ADA0AFB6BFC1C6772" box="[829,947,1277,1301]" italics="true" pageId="27" pageNumber="2809">dextrinicus</emphasis>
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</taxonomicName>
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||
. Cells are spherical, and may occur singly, in pairs or clusters and rarely in chains. Clusters of four may be observed, but they do not divide in two perpendicular directions at right angles. Only L(+)-lactic acid is produced from maltose, dextrin and starch [
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<bibRefCitation id="EFB14B6DFF96216ADD55FAEEFB2167F7" author="Haakensen M & Dobson CM & Hill JE & Ziola B." box="[1122,1166,1400,1424]" pageId="27" pageNumber="2809" pagination="615 - 621" refId="ref66147" refString="149. Haakensen M, Dobson CM, Hill JE, Ziola B. Reclassification of Pediococcus dextrinicus (Coster and White 1964) Back 1978 (Approved Lists 1980) as Lactobacillus dextrinicus comb. nov., and emended description of the genus Lactobacillus. Int J Syst Evol Microbiol 2009; 59: 615 - 621." type="journal article" year="2009">149</bibRefCitation>
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]. The genome size of the
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strain is 1.81 Mbp. The mol% G+C content of DNA is 38.1.
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</paragraph>
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<paragraph id="8B9F369CFF96216ADA0BFA52FB39679B" blockId="27.[826,1468,923,1730]" pageId="27" pageNumber="2809">Isolated from silage, fermenting vegetables, beer and sliced vacuum-packed cooked sausage.</paragraph>
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The
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strain is
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=
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<specimenCode id="DB869EE7FF96216ADDE1F987FAD9644E" box="[1238,1398,1553,1577]" collectionCode="CCUG" country="Sweden" httpUri="http://grbio.org/cool/td22-j49f" name="Culture Collection, University of Goteborg, Department of Clinical Bacteriology" pageId="27" pageNumber="2809">CCUG 18834</specimenCode>
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=
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=
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<collectionCode id="ED31AE59FF96216ADA96F9A6FC74642F" box="[929,987,1584,1608]" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="27" pageNumber="2809">DSM</collectionCode>
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20335
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=
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<specimenCode id="DB869EE7FF96216ADD0AF9A6FB026420" box="[1085,1197,1583,1608]" collectionCode="JCM" country="Japan" httpUri="http://grbio.org/cool/iyky-md37" name="Japan Collection of Microorganisms" pageId="27" pageNumber="2809">JCM 5887</specimenCode>
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=
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11485
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</superScript>
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=
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<specimenCode id="DB869EE7FF96216ADC55F9A6FC266401" collectionCode="NCIMB" country="United Kingdom" httpUri="http://grbio.org/cool/v838-riag" name="National Collections of Industrial Food and Marine Bacteria (incorporating the NCFB)" pageId="27" pageNumber="2809">NCIMB 701561</specimenCode>
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=
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<collectionCode id="ED31AE59FF96216ADA97F9D9FC716401" box="[928,990,1615,1638]" country="Russia" httpUri="http://grbio.org/cool/cgyj-ip3g" name="All-Russian Collection of Microorganisms" pageId="27" pageNumber="2809">VKM</collectionCode>
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B-1603
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.
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</materialsCitation>
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FF96216ADA0BF9EAFA2D64F3" box="[828,1410,1660,1684]" pageId="27" pageNumber="2809" type="description">
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<paragraph id="8B9F369CFF96216ADA0BF9EAFA2D64F3" blockId="27.[826,1468,923,1730]" box="[828,1410,1660,1684]" pageId="27" pageNumber="2809">Genome sequence accession number: AYYK00000000.</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FF96216ADA0BF93CFAA464A5" box="[828,1291,1706,1730]" pageId="27" pageNumber="2809" type="materials_examined">
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<paragraph id="8B9F369CFF96216ADA0BF93CFAA464A5" blockId="27.[826,1468,923,1730]" box="[828,1291,1706,1730]" pageId="27" pageNumber="2809">
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16S rRNA gene accession number:
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<accessionNumber id="9473AB7FFF96216ADD86F93CFAA764A5" box="[1201,1288,1706,1730]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/D87679" pageId="27" pageNumber="2809">D87679</accessionNumber>
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.
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</paragraph>
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</treatment>
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</document> |